SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom16g06030 |
| rosa_laevigata | RLG00000013339 |
| rosa_multiflora | Rmu_co8303975.1_g000001 Rmu_sc0000206.1_g000003 Rmu_sc0007276.1_g000001 Rmu_sc0040007.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00191700 |
| rosa_samantha | Rh6AG216100 Rh6CG223500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 109 |
| AciI | CCGC | 1 cut(s) | 242 |
| AcoI | YGGCCR | 1 cut(s) | 39 |
| AcsI | RAATTY | 1 cut(s) | 147 |
| AfaI | GTAC | 2 cut(s) | 73, 155 |
| AflIII | ACRYGT | 1 cut(s) | 56 |
| AgsI | TTSAA | 1 cut(s) | 234 |
| AluBI | AGCT | 2 cut(s) | 169, 230 |
| AluI | AGCT | 2 cut(s) | 169, 230 |
| AoxI | GGCC | 1 cut(s) | 39 |
| ApoI | RAATTY | 1 cut(s) | 147 |
| AxyI | CCTNAGG | 1 cut(s) | 105 |
| BalI | TGGCCA | 1 cut(s) | 41 |
| BanI | GGYRCC | 1 cut(s) | 109 |
| BbsI | GAAGAC | 1 cut(s) | 14 |
| BccI | CCATC | 1 cut(s) | 22 |
| BisI | GCNGC | 1 cut(s) | 242 |
| BlsI | GCNGC | 1 cut(s) | 243 |
| BmiI | GGNNCC | 1 cut(s) | 111 |
| BmsI | GCATC | 2 cut(s) | 163, 228 |
| BpiI | GAAGAC | 1 cut(s) | 14 |
| Bse21I | CCTNAGG | 1 cut(s) | 105 |
| BseGI | GGATG | 2 cut(s) | 103, 205 |
| BseMII | CTCAG | 3 cut(s) | 9, 96, 105 |
| BshFI | GGCC | 1 cut(s) | 41 |
| BshNI | GGYRCC | 1 cut(s) | 109 |
| BsnI | GGCC | 1 cut(s) | 41 |
| Bsp143I | GATC | 1 cut(s) | 117 |
| BspACI | CCGC | 1 cut(s) | 242 |
| BspANI | GGCC | 1 cut(s) | 41 |
| BspCNI | CTCAG | 3 cut(s) | 10, 97, 106 |
| BspLI | GGNNCC | 1 cut(s) | 111 |
| BspT107I | GGYRCC | 1 cut(s) | 109 |
| BssMI | GATC | 1 cut(s) | 117 |
| BstDEI | CTNAG | 4 cut(s) | 18, 105, 114, 224 |
| BstF5I | GGATG | 2 cut(s) | 103, 205 |
| BstKTI | GATC | 1 cut(s) | 120 |
| BstMBI | GATC | 1 cut(s) | 117 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 109 |
| BstNSI | RCATGY | 1 cut(s) | 60 |
| BstV2I | GAAGAC | 1 cut(s) | 14 |
| Bsu36I | CCTNAGG | 1 cut(s) | 105 |
| BsuRI | GGCC | 1 cut(s) | 41 |
| BtsCI | GGATG | 2 cut(s) | 103, 205 |
| Csp6I | GTAC | 2 cut(s) | 72, 154 |
| CviAII | CATG | 2 cut(s) | 57, 258 |
| CviJI | RGCY | 5 cut(s) | 41, 103, 133, 169, 230 |
| CviKI_1 | RGCY | 5 cut(s) | 41, 103, 133, 169, 230 |
| CviQI | GTAC | 2 cut(s) | 72, 154 |
| DdeI | CTNAG | 4 cut(s) | 18, 105, 114, 224 |
| DpnI | GATC | 1 cut(s) | 119 |
| DpnII | GATC | 1 cut(s) | 117 |
| EaeI | YGGCCR | 1 cut(s) | 39 |
| Eco81I | CCTNAGG | 1 cut(s) | 105 |
| FaeI | CATG | 2 cut(s) | 60, 261 |
| FaiI | YATR | 2 cut(s) | 58, 259 |
| FatI | CATG | 2 cut(s) | 56, 257 |
| Fnu4HI | GCNGC | 1 cut(s) | 242 |
| FokI | GGATG | 2 cut(s) | 110, 212 |
| Fsp4HI | GCNGC | 1 cut(s) | 242 |
| GluI | GCNGC | 1 cut(s) | 242 |
| HaeIII | GGCC | 1 cut(s) | 41 |
| Hin1II | CATG | 2 cut(s) | 60, 261 |
| HincII | GTYRAC | 1 cut(s) | 217 |
| HindII | GTYRAC | 1 cut(s) | 217 |
| HindIII | AAGCTT | 1 cut(s) | 167 |
| HinfI | GANTC | 1 cut(s) | 137 |
| Hpy166II | GTNNAC | 1 cut(s) | 217 |
| Hpy188I | TCNGA | 1 cut(s) | 142 |
| Hpy188III | TCNNGA | 1 cut(s) | 51 |
| Hpy8I | GTNNAC | 1 cut(s) | 217 |
| HpyAV | CCTTC | 1 cut(s) | 255 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 109 |
| HpyF3I | CTNAG | 4 cut(s) | 18, 105, 114, 224 |
| Hsp92II | CATG | 2 cut(s) | 60, 261 |
| Kzo9I | GATC | 1 cut(s) | 117 |
| LmnI | GCTCC | 1 cut(s) | 142 |
| LpnPI | CCDG | 3 cut(s) | 117, 126, 147 |
| LweI | GCATC | 2 cut(s) | 163, 228 |
| MalI | GATC | 1 cut(s) | 119 |
| MboI | GATC | 1 cut(s) | 117 |
| MboII | GAAGA | 1 cut(s) | 19 |
| MlsI | TGGCCA | 1 cut(s) | 41 |
| MluCI | AATT | 2 cut(s) | 147, 205 |
| MluNI | TGGCCA | 1 cut(s) | 41 |
| MlyI | GAGTC | 1 cut(s) | 131 |
| MnlI | CCTC | 2 cut(s) | 88, 100 |
| Mox20I | TGGCCA | 1 cut(s) | 41 |
| MscI | TGGCCA | 1 cut(s) | 41 |
| MseI | TTAA | 2 cut(s) | 129, 188 |
| Msp20I | TGGCCA | 1 cut(s) | 41 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 109 |
| NdeII | GATC | 1 cut(s) | 117 |
| NlaIII | CATG | 2 cut(s) | 60, 261 |
| NlaIV | GGNNCC | 1 cut(s) | 111 |
| NspI | RCATGY | 1 cut(s) | 60 |
| PciI | ACATGT | 1 cut(s) | 56 |
| PkrI | GCNGC | 1 cut(s) | 243 |
| PleI | GAGTC | 1 cut(s) | 131 |
| PpsI | GAGTC | 1 cut(s) | 131 |
| PscI | ACATGT | 1 cut(s) | 56 |
| PspN4I | GGNNCC | 1 cut(s) | 111 |
| RsaI | GTAC | 2 cut(s) | 73, 155 |
| RsaNI | GTAC | 2 cut(s) | 72, 154 |
| SaqAI | TTAA | 2 cut(s) | 129, 188 |
| SatI | GCNGC | 1 cut(s) | 242 |
| Sau3AI | GATC | 1 cut(s) | 117 |
| SchI | GAGTC | 1 cut(s) | 131 |
| SetI | ASST | 3 cut(s) | 111, 171, 232 |
| SfaNI | GCATC | 2 cut(s) | 163, 228 |
| Sse9I | AATT | 2 cut(s) | 147, 205 |
| SsiI | CCGC | 1 cut(s) | 242 |
| TaqI | TCGA | 4 cut(s) | 50, 80, 209, 248 |
| TasI | AATT | 2 cut(s) | 147, 205 |
| TauI | GCSGC | 1 cut(s) | 244 |
| Tru1I | TTAA | 2 cut(s) | 129, 188 |
| Tru9I | TTAA | 2 cut(s) | 129, 188 |
| XapI | RAATTY | 1 cut(s) | 147 |
| XceI | RCATGY | 1 cut(s) | 60 |