Transferase family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| prunus_persica | Prupe.8G200500_v2.0.a1 |
| rosa_laevigata | RLG00000012744 |
| rosa_multiflora | Rmu_sc0000614.1_g000006 |
| rosa_roxburghii | Rroxscaffold_7G00184700 |
| rosa_samantha | Rh6AG276100 Rh6AG276300 Rh6BG276400 Rh6BG276500 Rh6CG278500 Rh6DG270900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 175 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 140 |
| AfaI | GTAC | 2 cut(s) | 39, 104 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 140 |
| AluBI | AGCT | 4 cut(s) | 16, 131, 150, 171 |
| AluI | AGCT | 4 cut(s) | 16, 131, 150, 171 |
| AspLEI | GCGC | 1 cut(s) | 60 |
| BfaI | CTAG | 1 cut(s) | 17 |
| BfoI | RGCGCY | 1 cut(s) | 61 |
| BpmI | CTGGAG | 1 cut(s) | 32 |
| BsaJI | CCNNGG | 1 cut(s) | 156 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 140 |
| Bse3DI | GCAATG | 1 cut(s) | 145 |
| BseDI | CCNNGG | 1 cut(s) | 156 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 140 |
| BseMI | GCAATG | 1 cut(s) | 145 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 140 |
| BsrDI | GCAATG | 1 cut(s) | 145 |
| BssECI | CCNNGG | 1 cut(s) | 156 |
| BstH2I | RGCGCY | 1 cut(s) | 61 |
| BstHHI | GCGC | 1 cut(s) | 60 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 55 |
| CfoI | GCGC | 1 cut(s) | 60 |
| Csp6I | GTAC | 2 cut(s) | 38, 103 |
| CviJI | RGCY | 6 cut(s) | 16, 49, 131, 150, 161, 171 |
| CviKI_1 | RGCY | 6 cut(s) | 16, 49, 131, 150, 161, 171 |
| CviQI | GTAC | 2 cut(s) | 38, 103 |
| FaiI | YATR | 1 cut(s) | 175 |
| FspBI | CTAG | 1 cut(s) | 17 |
| GlaI | GCGC | 1 cut(s) | 59 |
| GsuI | CTGGAG | 1 cut(s) | 32 |
| HaeII | RGCGCY | 1 cut(s) | 61 |
| HhaI | GCGC | 1 cut(s) | 60 |
| Hin6I | GCGC | 1 cut(s) | 58 |
| HinP1I | GCGC | 1 cut(s) | 58 |
| HindIII | AAGCTT | 1 cut(s) | 169 |
| HinfI | GANTC | 1 cut(s) | 7 |
| Hpy166II | GTNNAC | 1 cut(s) | 103 |
| Hpy188I | TCNGA | 1 cut(s) | 157 |
| Hpy188III | TCNNGA | 1 cut(s) | 11 |
| Hpy8I | GTNNAC | 1 cut(s) | 103 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 55 |
| HspAI | GCGC | 1 cut(s) | 58 |
| LmnI | GCTCC | 2 cut(s) | 13, 136 |
| LpnPI | CCDG | 2 cut(s) | 54, 74 |
| MaeI | CTAG | 1 cut(s) | 17 |
| MnlI | CCTC | 1 cut(s) | 151 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 55 |
| PfeI | GAWTC | 1 cut(s) | 7 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 140 |
| PsiI | TTATAA | 1 cut(s) | 175 |
| RsaI | GTAC | 2 cut(s) | 39, 104 |
| RsaNI | GTAC | 2 cut(s) | 38, 103 |
| SetI | ASST | 4 cut(s) | 18, 133, 152, 173 |
| SgeI | CNNG | 8 cut(s) | 23, 29, 53, 58, 73, 100, 147, 169 |
| SspI | AATATT | 1 cut(s) | 82 |
| SspMI | CTAG | 1 cut(s) | 17 |
| TfiI | GAWTC | 1 cut(s) | 7 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 140 |
| XspI | CTAG | 1 cut(s) | 17 |