Rh6AG318000

Domain of unknown function (DUF4378)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0008556
Physical Location & Seq
Reverse (-)
51721440 .. 51725516
4077 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG318000.1

Sequence Viewer

Length: 1866 bp
ATGACGACTGGGATAGTGCAAGAGCAGAACCTTGAAAAGCACATAGAGAAGCAGATGGGGTGCATGGCCGGCTTTCTTCAGATCTTCGATCGCCACCAGATTCTCACCGGAAAACGCCTCTGCTCCACCAAACGCCTACCTTCTTCGGCGGTGGTGATGTCGTCACCAGAGCCGTCGTCGAACGTATCGCGGGAGATATCGAAAGAACTGGAGAAACCACCGCAAAGGAAATCCATGCCTTCACCGGACGGGTCGGAGCAATCTCCACAGGCGTCGGAGCTCCGATCTCCGCTGCCGGAACCACGGACGCCGTCGTCGGAATCACCTTATCCGAAGTCGCCTCTTCCTCTTCCGGTTTTCGAATTCAAAGAAGGCACGAGGTCGTCGTGGAAGTTTTCCAGAGACATGCCGAGGCTCTCACTCGATAGCAGAGCCACCGTGGACGCAAAGGGAAGCCTGTACCCGAAGGAGATCCGTACCAACGCTGCGATATTGTCAGCCAACCGAAGCGTGAACTCCGGCGACGGAGCAATTGACGGAGACAAGAATCACCGCTCGCCTAGCGTCATTGCCAGGCTAATGGGACTCGAACCGTTGCCGCAATCGGATCCCGAACCGATCAAGCTTCGGAGATCTGCGTCAGAGTCCAGAGTGAACAGAGATCTGTACCAGCCACGGTCCGTGGACAGCAATAATTTTCAGGCAAGGCAACCGCAGCAGCCGAATTTGAAGAGCAATAACTGCGGCAATGTAGGCAGAGAGGATCGGAGCTGCAATACTAGACAGGTAGATCCGAAATCTTACAATGTGAAAGCTCAAAACAGGGGAATGGTGCAGAGGAAGAGCTTCTTTGATTCGGCGGATTTTTTTCCGGAGCCGAAACAGTCGATTTCGGTGTACGGTGAGATTGAGAAGAGGCTGAGGATGAGAGGCATTGATGAACCGTCTAAAGATTTGGAGACATTGAAGCAAATCCTTGAAGCTTTACAGCTCAAAGGTCTTCTTCACTCCCGGAAATCTTCGCCTCAAATCAACTCCCGAAATTTCGTCTACGACCGGTTCTCCGAATCGCCGATTGTGGTGATGAGGCCGTCCAGATCGCCGACTTCCACTAACCGAGCCGCCAGATTCGGCAACGAATCGCCGCCTTCAAGCTTCCGGTCAAGAGCCGGAGTTCGCCGGAACGCGAACCCCGCCGGCGAGACGTATCAGGCAATGAGCCCAAGGCGTGAGCGGGCGGAGAATGTGCGGAGCCAGAGCAGAGGTAGAAGTCCGAGCCTGCCGACCAGTAGCGAGAGTGGTGTGAGAAGTCCGAGTAGGAGAGGAGGCCCATTAGTGATCGAGACGCATAGGAAAGGAAGTGTGGATTCAGTGGAGCACAGGAGAGTCTCTCCGGTTCACTCTCCCAAGGTTCGTTCAAGACGGTCGGTCTCGGATCAACCTACGACCAACCGGTCACCGAGGGTCAAGAAACCAACGGCTGAGATGACTCCTAAGGAGGAAAAAATAACTATTCACAGAGCAGAGGATGATTCCTCCACCATGTCCGAGAGCAGTTCTTCACAAACCGACACTGAGAGATGGAAGGTGGAGGAGTACAAAGAAGGGAGGAGTCTATTGGAGAGGTGTGACAAGCTACTCAACAGTATAGCCGAGTTGCAACCGAGTCCGGTTTCGGTGCTGGACTCGTCGTTTTTCAAAGAGGAATCTTCACCCTCGCCAGTGATGAAGCGCAGCATTGATTTCAAAGGTAATTGGGCCACTTCCACCCTGCCACACACAGACACTGCCATTTTTGTTTCTTTAAACAGCTCTGGGTTTTTGGACCCTGGACTGGTCTTCCTTCCAGTTTCAGAGAGATTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4378 VARLMGL

Protein Analysis

621

Amino Acids

69.47

Weight (kDa)

9.88

Isoelectric Point (pI)

86.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VARLMGL PF14383 183 - 202 5.8e-07 DUF761-associated sequence motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 313, 1453
AccBSI CCGCTC 2 cut(s) 555, 1234
AccI GTMKAC 1 cut(s) 1050
AccII CGCG 2 cut(s) 190, 1187
AccIII TCCGGA 1 cut(s) 871
AclWI GGATC 6 cut(s) 466, 602, 615, 771, 785, 1443
AcoI YGGCCR 1 cut(s) 66
AcsI RAATTY 3 cut(s) 362, 724, 1042
AcuI CTGAAG 1 cut(s) 62
AcyI GRCGYC 2 cut(s) 272, 308
AfaI GTAC 5 cut(s) 461, 478, 668, 899, 1598
AfiI CCNNNNNNNGG 1 cut(s) 1834
AgeI ACCGGT 2 cut(s) 1056, 1452
AgsI TTSAA 9 cut(s) 35, 367, 730, 967, 980, 1152, 1419, 1699, 1747
AhdI GACNNNNNGTC 1 cut(s) 1427
AjnI CCWGG 2 cut(s) 572, 1828
Alw21I GWGCWC 2 cut(s) 282, 1380
Alw26I GTCTC 7 cut(s) 396, 534, 953, 1196, 1337, 1393, 1435
AlwI GGATC 6 cut(s) 466, 602, 615, 771, 785, 1443
AlwNI CAGNNNCTG 1 cut(s) 1787
Aor13HI TCCGGA 1 cut(s) 871
AoxI GGCC 4 cut(s) 66, 1088, 1327, 1758
ApeKI GCWGC 6 cut(s) 292, 485, 715, 718, 771, 1734
ApoI RAATTY 3 cut(s) 362, 724, 1042
AsiGI ACCGGT 2 cut(s) 1056, 1452
Asp700I GAANNNNTTC 1 cut(s) 845
AspLEI GCGC 1 cut(s) 1734
AspS9I GGNCC 4 cut(s) 678, 1328, 1758, 1825
AsuC2I CCSGG 1 cut(s) 1012
AsuII TTCGAA 1 cut(s) 360
AvaII GGWCC 2 cut(s) 678, 1825
AxyI CCTNAGG 1 cut(s) 1494
BamHI GGATCC 1 cut(s) 607
BanII GRGCYC 2 cut(s) 282, 1223
BauI CACGAG 1 cut(s) 376
BbsI GAAGAC 2 cut(s) 992, 1831
Bbv12I GWGCWC 2 cut(s) 282, 1380
BbvCI CCTCAGC 1 cut(s) 920
BbvI GCAGC 6 cut(s) 279, 472, 727, 730, 758, 1746
BccI CCATC 2 cut(s) 49, 1575
BceAI ACGGC 4 cut(s) 157, 295, 1075, 1494
BciT130I CCWGG 2 cut(s) 574, 1830
BcnI CCSGG 1 cut(s) 1012
BcoDI GTCTC 7 cut(s) 396, 534, 953, 1196, 1337, 1393, 1435
BfaI CTAG 2 cut(s) 561, 780
BglII AGATCT 3 cut(s) 81, 632, 661
Bme1390I CCNGG 3 cut(s) 574, 1012, 1830
Bme18I GGWCC 2 cut(s) 678, 1825
BmeRI GACNNNNNGTC 1 cut(s) 1427
BmgT120I GGNCC 4 cut(s) 678, 1328, 1758, 1825
BmiI GGNNCC 5 cut(s) 300, 609, 876, 1253, 1827
BmrFI CCNGG 3 cut(s) 574, 1012, 1830
BmrI ACTGGG 1 cut(s) 18
BmuI ACTGGG 1 cut(s) 18
BpiI GAAGAC 2 cut(s) 992, 1831
BplI GAGNNNNNCTC 2 cut(s) 1375, 1407
BpmI CTGGAG 1 cut(s) 230
Bpu10I CCTNAGC 1 cut(s) 920
Bpu14I TTCGAA 1 cut(s) 360
BpuMI CCSGG 1 cut(s) 1012
BsaHI GRCGYC 2 cut(s) 272, 308
BsaI GGTCTC 1 cut(s) 1435
BsaJI CCNNGG 9 cut(s) 302, 410, 438, 674, 681, 1223, 1407, 1460, 1828
BsaWI WCCGGW 9 cut(s) 107, 244, 352, 871, 1056, 1158, 1393, 1452, 1669
BsaXI ACNNNNNCTCC 2 cut(s) 1046, 1076
Bsc4I CCNNNNNNNGG 1 cut(s) 1834
Bse118I RCCGGY 4 cut(s) 68, 1056, 1196, 1452
Bse1I ACTGG 6 cut(s) 13, 213, 1287, 1721, 1839, 1847
Bse21I CCTNAGG 1 cut(s) 1494
Bse3DI GCAATG 3 cut(s) 567, 754, 1221
BseAI TCCGGA 1 cut(s) 871
BseBI CCWGG 2 cut(s) 574, 1830
BseDI CCNNGG 9 cut(s) 302, 410, 438, 674, 681, 1223, 1407, 1460, 1828
BseGI GGATG 2 cut(s) 930, 1534
BseLI CCNNNNNNNGG 1 cut(s) 1834
BseMI GCAATG 3 cut(s) 567, 754, 1221
BseMII CTCAG 3 cut(s) 911, 1473, 1566
BseNI ACTGG 6 cut(s) 13, 213, 1287, 1721, 1839, 1847
BseRI GAGGAG 3 cut(s) 1338, 1607, 1624
BseXI GCAGC 6 cut(s) 279, 472, 727, 730, 758, 1746
BsgI GTGCAG 1 cut(s) 854
Bsh1236I CGCG 2 cut(s) 190, 1187
Bsh1285I CGRYCG 3 cut(s) 91, 1057, 1427
BshFI GGCC 4 cut(s) 68, 1090, 1329, 1760
BshTI ACCGGT 2 cut(s) 1056, 1452
BsiEI CGRYCG 3 cut(s) 91, 1057, 1427
BsiHKAI GWGCWC 2 cut(s) 282, 1380
BslFI GGGAC 1 cut(s) 597
BslI CCNNNNNNNGG 1 cut(s) 1834
BsmAI GTCTC 7 cut(s) 396, 534, 953, 1196, 1337, 1393, 1435
BsmBI CGTCTC 2 cut(s) 1196, 1337
BsmFI GGGAC 1 cut(s) 597
BsnI GGCC 4 cut(s) 68, 1090, 1329, 1760
Bso31I GGTCTC 1 cut(s) 1435
Bsp119I TTCGAA 1 cut(s) 360
Bsp1286I GDGCHC 3 cut(s) 282, 1223, 1380
Bsp13I TCCGGA 1 cut(s) 871
BspANI GGCC 4 cut(s) 68, 1090, 1329, 1760
BspCNI CTCAG 3 cut(s) 912, 1474, 1567
BspEI TCCGGA 1 cut(s) 871
BspFNI CGCG 2 cut(s) 190, 1187
BspLI GGNNCC 5 cut(s) 300, 609, 876, 1253, 1827
BspPI GGATC 6 cut(s) 466, 602, 615, 771, 785, 1443
BspQI GCTCTTC 2 cut(s) 725, 836
BspT104I TTCGAA 1 cut(s) 360
BspTNI GGTCTC 1 cut(s) 1435
BsrBI CCGCTC 2 cut(s) 555, 1234
BsrDI GCAATG 3 cut(s) 567, 754, 1221
BsrFI RCCGGY 4 cut(s) 68, 1056, 1196, 1452
BsrI ACTGG 6 cut(s) 13, 213, 1287, 1721, 1839, 1847
BssAI RCCGGY 4 cut(s) 68, 1056, 1196, 1452
BssECI CCNNGG 9 cut(s) 302, 410, 438, 674, 681, 1223, 1407, 1460, 1828
BssNI GRCGYC 2 cut(s) 272, 308
BssSI CACGAG 1 cut(s) 376
BssT1I CCWWGG 2 cut(s) 1223, 1407
Bst2BI CACGAG 1 cut(s) 376
Bst2UI CCWGG 2 cut(s) 574, 1830
Bst4CI ACNGT 8 cut(s) 439, 594, 678, 885, 902, 945, 1425, 1646
Bst6I CTCTTC 5 cut(s) 348, 354, 725, 836, 908
BstACI GRCGYC 2 cut(s) 272, 308
BstAPI GCANNNNNTGC 1 cut(s) 741
BstBI TTCGAA 1 cut(s) 360
BstC8I GCNNGC 5 cut(s) 70, 557, 1198, 1236, 1280
BstDEI CTNAG 4 cut(s) 920, 1482, 1494, 1575
BstDSI CCRYGG 4 cut(s) 302, 438, 674, 681
BstEII GGTNACC 1 cut(s) 1455
BstF5I GGATG 2 cut(s) 930, 1534
BstFNI CGCG 2 cut(s) 190, 1187
BstHHI GCGC 1 cut(s) 1734
BstMAI GTCTC 7 cut(s) 396, 534, 953, 1196, 1337, 1393, 1435
BstMCI CGRYCG 3 cut(s) 91, 1057, 1427
BstMWI GCNNNNNNNGC 6 cut(s) 69, 561, 715, 741, 753, 1193
BstNI CCWGG 2 cut(s) 574, 1830
BstNSI RCATGY 1 cut(s) 409
BstPI GGTNACC 1 cut(s) 1455
BstSCI CCNGG 3 cut(s) 572, 1010, 1828
BstUI CGCG 2 cut(s) 190, 1187
BstV1I GCAGC 6 cut(s) 279, 472, 727, 730, 758, 1746
BstV2I GAAGAC 2 cut(s) 992, 1831
BstX2I RGATCY 6 cut(s) 81, 471, 607, 632, 661, 790
BstXI CCANNNNNNTGG 1 cut(s) 580
BstYI RGATCY 6 cut(s) 81, 471, 607, 632, 661, 790
Bsu36I CCTNAGG 1 cut(s) 1494
BsuRI GGCC 4 cut(s) 68, 1090, 1329, 1760
BtgI CCRYGG 4 cut(s) 302, 438, 674, 681
BtsCI GGATG 2 cut(s) 930, 1534
BtsI GCAGTG 1 cut(s) 1785
BtsIMutI CAGTG 4 cut(s) 1377, 1572, 1728, 1785
Cac8I GCNNGC 5 cut(s) 70, 557, 1198, 1236, 1280
CaiI CAGNNNCTG 1 cut(s) 1787
CfoI GCGC 1 cut(s) 1734
Cfr10I RCCGGY 4 cut(s) 68, 1056, 1196, 1452
Cfr13I GGNCC 4 cut(s) 678, 1328, 1758, 1825
CpoI CGGWCCG 1 cut(s) 678
CseI GACGC 6 cut(s) 261, 316, 452, 553, 627, 1354
Csp6I GTAC 5 cut(s) 460, 477, 667, 898, 1597
CspAI ACCGGT 2 cut(s) 1056, 1452
CspI CGGWCCG 1 cut(s) 678
CviAII CATG 4 cut(s) 64, 235, 406, 1543
CviQI GTAC 5 cut(s) 460, 477, 667, 898, 1597
DdeI CTNAG 4 cut(s) 920, 1482, 1494, 1575
DraI TTTAAA 1 cut(s) 1806
DrdI GACNNNNNNGTC 2 cut(s) 313, 1453
DriI GACNNNNNGTC 1 cut(s) 1427
DseDI GACNNNNNNGTC 2 cut(s) 313, 1453
EaeI YGGCCR 1 cut(s) 66
Eam1104I CTCTTC 5 cut(s) 348, 354, 725, 836, 908
Eam1105I GACNNNNNGTC 1 cut(s) 1427
EarI CTCTTC 5 cut(s) 348, 354, 725, 836, 908
EciI GGCGGA 2 cut(s) 875, 1253
Ecl136II GAGCTC 1 cut(s) 280
Eco130I CCWWGG 2 cut(s) 1223, 1407
Eco24I GRGCYC 2 cut(s) 282, 1223
Eco31I GGTCTC 1 cut(s) 1435
Eco32I GATATC 1 cut(s) 198
Eco47I GGWCC 2 cut(s) 678, 1825
Eco53kI GAGCTC 1 cut(s) 280
Eco57I CTGAAG 1 cut(s) 62
Eco81I CCTNAGG 1 cut(s) 1494
Eco91I GGTNACC 1 cut(s) 1455
EcoICRI GAGCTC 1 cut(s) 280
EcoO65I GGTNACC 1 cut(s) 1455
EcoRI GAATTC 1 cut(s) 362
EcoRII CCWGG 2 cut(s) 572, 1828
EcoRV GATATC 1 cut(s) 198
EcoT14I CCWWGG 2 cut(s) 1223, 1407
EcoT38I GRGCYC 2 cut(s) 282, 1223
ErhI CCWWGG 2 cut(s) 1223, 1407
Esp3I CGTCTC 2 cut(s) 1196, 1337
FaeI CATG 4 cut(s) 67, 238, 409, 1546
FaiI YATR 7 cut(s) 44, 65, 236, 407, 1350, 1544, 1649
FalI AAGNNNNNCTT 4 cut(s) 833, 865, 987, 1019
FaqI GGGAC 1 cut(s) 597
FatI CATG 4 cut(s) 63, 234, 405, 1542
FauI CCCGC 3 cut(s) 183, 1201, 1227
FblI GTMKAC 1 cut(s) 1050
FokI GGATG 2 cut(s) 937, 1541
FriOI GRGCYC 2 cut(s) 282, 1223
FspBI CTAG 2 cut(s) 561, 780
GlaI GCGC 1 cut(s) 1733
GsuI CTGGAG 1 cut(s) 230
HaeIII GGCC 4 cut(s) 68, 1090, 1329, 1760
HgaI GACGC 6 cut(s) 261, 316, 452, 553, 627, 1354
HhaI GCGC 1 cut(s) 1734
Hin1I GRCGYC 2 cut(s) 272, 308
Hin1II CATG 4 cut(s) 67, 238, 409, 1546
Hin6I GCGC 1 cut(s) 1732
HinP1I GCGC 1 cut(s) 1732
HindIII AAGCTT 3 cut(s) 623, 981, 1153
Hpy166II GTNNAC 7 cut(s) 442, 514, 655, 685, 898, 1051, 1399
Hpy8I GTNNAC 7 cut(s) 442, 514, 655, 685, 898, 1051, 1399
Hpy99I CGWCG 8 cut(s) 178, 181, 277, 316, 319, 388, 527, 1693
HpyAV CCTTC 8 cut(s) 150, 249, 365, 460, 1158, 1579, 1598, 1853
HpyCH4III ACNGT 8 cut(s) 439, 594, 678, 885, 902, 945, 1425, 1646
HpyCH4IV ACGT 2 cut(s) 183, 1205
HpyCH4V TGCA 5 cut(s) 19, 63, 774, 835, 1660
HpyF10VI GCNNNNNNNGC 6 cut(s) 69, 561, 715, 741, 753, 1193
HpyF3I CTNAG 4 cut(s) 920, 1482, 1494, 1575
HpySE526I ACGT 2 cut(s) 183, 1205
Hsp92I GRCGYC 2 cut(s) 272, 308
Hsp92II CATG 4 cut(s) 67, 238, 409, 1546
HspAI GCGC 1 cut(s) 1732
Kpn2I TCCGGA 1 cut(s) 871
KroI GCCGGC 2 cut(s) 68, 1196
KroNI GCCGGC 2 cut(s) 70, 1198
LguI GCTCTTC 2 cut(s) 725, 836
LmnI GCTCC 9 cut(s) 128, 256, 277, 285, 527, 768, 874, 1251, 1375
Lsp1109I GCAGC 6 cut(s) 279, 472, 727, 730, 758, 1746
MaeI CTAG 2 cut(s) 561, 780
MaeII ACGT 2 cut(s) 183, 1205
MaeIII GTNAC 3 cut(s) 162, 1455, 1628
MbiI CCGCTC 2 cut(s) 555, 1234
MfeI CAATTG 1 cut(s) 531
MflI RGATCY 6 cut(s) 81, 471, 607, 632, 661, 790
MhlI GDGCHC 3 cut(s) 282, 1223, 1380
MluCI AATT 6 cut(s) 362, 531, 694, 724, 1042, 1753
MlyI GAGTC 7 cut(s) 579, 653, 1395, 1483, 1621, 1675, 1679
MmeI TCCRAC 3 cut(s) 234, 255, 297
MreI CGCCGGCG 1 cut(s) 1196
MroI TCCGGA 1 cut(s) 871
MroNI GCCGGC 2 cut(s) 68, 1196
MroXI GAANNNNTTC 1 cut(s) 845
MseI TTAA 1 cut(s) 1805
MspA1I CMGCKG 1 cut(s) 292
MspR9I CCNGG 3 cut(s) 574, 1012, 1830
MunI CAATTG 1 cut(s) 531
MvaI CCWGG 2 cut(s) 574, 1830
MvnI CGCG 2 cut(s) 190, 1187
MwoI GCNNNNNNNGC 6 cut(s) 69, 561, 715, 741, 753, 1193
NaeI GCCGGC 2 cut(s) 70, 1198
NciI CCSGG 1 cut(s) 1012
NgoMIV GCCGGC 2 cut(s) 68, 1196
NlaIII CATG 4 cut(s) 67, 238, 409, 1546
NlaIV GGNNCC 5 cut(s) 300, 609, 876, 1253, 1827
NmeAIII GCCGAG 2 cut(s) 435, 1678
NmuCI GTSAC 3 cut(s) 162, 1455, 1628
NspI RCATGY 1 cut(s) 409
NspV TTCGAA 1 cut(s) 360
PciSI GCTCTTC 2 cut(s) 725, 836
PcsI WCGNNNNNNNCGW 1 cut(s) 383
PdiI GCCGGC 2 cut(s) 70, 1198
PdmI GAANNNNTTC 1 cut(s) 845
PflFI GACNNNGTC 1 cut(s) 310
PfoI TCCNGGA 1 cut(s) 1010
PinAI ACCGGT 2 cut(s) 1056, 1452
Ple19I CGATCG 1 cut(s) 91
PleI GAGTC 7 cut(s) 579, 652, 1394, 1483, 1620, 1674, 1679
PpsI GAGTC 7 cut(s) 579, 652, 1394, 1483, 1620, 1674, 1679
Psp124BI GAGCTC 1 cut(s) 282
Psp6I CCWGG 2 cut(s) 572, 1828
PspEI GGTNACC 1 cut(s) 1455
PspGI CCWGG 2 cut(s) 572, 1828
PspN4I GGNNCC 5 cut(s) 300, 609, 876, 1253, 1827
PspPI GGNCC 4 cut(s) 678, 1328, 1758, 1825
PstNI CAGNNNCTG 1 cut(s) 1787
PsuI RGATCY 6 cut(s) 81, 471, 607, 632, 661, 790
PsyI GACNNNGTC 1 cut(s) 310
PvuI CGATCG 1 cut(s) 91
RsaI GTAC 5 cut(s) 461, 478, 668, 899, 1598
RsaNI GTAC 5 cut(s) 460, 477, 667, 898, 1597
Rsr2I CGGWCCG 1 cut(s) 678
RsrII CGGWCCG 1 cut(s) 678
SacI GAGCTC 1 cut(s) 282
SapI GCTCTTC 2 cut(s) 725, 836
SaqAI TTAA 1 cut(s) 1805
Sau96I GGNCC 4 cut(s) 678, 1328, 1758, 1825
SchI GAGTC 7 cut(s) 579, 653, 1395, 1483, 1621, 1675, 1679
ScrFI CCNGG 3 cut(s) 574, 1012, 1830
SduI GDGCHC 3 cut(s) 282, 1223, 1380
SfuI TTCGAA 1 cut(s) 360
SgrAI CRCCGGYG 1 cut(s) 1196
SinI GGWCC 2 cut(s) 678, 1825
Sse9I AATT 6 cut(s) 362, 531, 694, 724, 1042, 1753
SspMI CTAG 2 cut(s) 561, 780
SstI GAGCTC 1 cut(s) 282
StyD4I CCNGG 3 cut(s) 572, 1010, 1828
StyI CCWWGG 2 cut(s) 1223, 1407
TaaI ACNGT 8 cut(s) 439, 594, 678, 885, 902, 945, 1425, 1646
TaiI ACGT 2 cut(s) 186, 1208
TaqI TCGA 8 cut(s) 87, 179, 200, 360, 423, 588, 887, 1341
TaqII GACCGA 1 cut(s) 1417
TasI AATT 6 cut(s) 362, 531, 694, 724, 1042, 1753
TatI WGTACW 1 cut(s) 1596
TauI GCSGC 4 cut(s) 601, 747, 1124, 1147
Tru1I TTAA 1 cut(s) 1805
Tru9I TTAA 1 cut(s) 1805
TscAI CASTG 4 cut(s) 1377, 1579, 1728, 1792
TseFI GTSAC 3 cut(s) 162, 1455, 1628
TseI GCWGC 6 cut(s) 292, 485, 715, 718, 771, 1734
Tsp45I GTSAC 3 cut(s) 162, 1455, 1628
TspDTI ATGAA 2 cut(s) 954, 1742
TspGWI ACGGA 5 cut(s) 319, 464, 540, 552, 670
TspRI CASTG 4 cut(s) 1377, 1579, 1728, 1792
Tth111I GACNNNGTC 1 cut(s) 310
VpaK11BI GGWCC 2 cut(s) 678, 1825
XapI RAATTY 3 cut(s) 362, 724, 1042
XceI RCATGY 1 cut(s) 409
XmiI GTMKAC 1 cut(s) 1050
XmnI GAANNNNTTC 1 cut(s) 845
XspI CTAG 2 cut(s) 561, 780
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.