Domain of unknown function (DUF4378)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G63430 AT3G63430 |
| fragaria_vesca | FvH4_2g22810 FvH4_2g22810 FvH4_2g22810 |
| malus_domestica | MD03G1256300.v1.1 MD11G1277100.v1.1 |
| prunus_persica | Prupe.8G233400_v2.0.a1 |
| pyrus_communis | pycom03g20300 pycom03g20310 pycom11g24510 |
| rosa_chinensis | RchiOBHm_Chr6g0289731 |
| rosa_laevigata | RLG00000012272 |
| rosa_multiflora | Rmu_co8011000.1_g000001 Rmu_sc0005640.1_g000024 |
| rosa_roxburghii | Rroxscaffold_7G00177610 Rroxscaffold_7G00178110 |
| rosa_rugosa | Rorug06G0206100 |
| rosa_samantha | Rh6AG318000 Rh6BG325300 Rh6CG330900 Rh6DG316600 |
| rosa_wichuraiana | Rw6G027400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 4 cut(s) | 313, 1453, 2032, 2162 |
| AccBSI | CCGCTC | 2 cut(s) | 555, 1234 |
| AccI | GTMKAC | 1 cut(s) | 1050 |
| AccII | CGCG | 2 cut(s) | 190, 1187 |
| AccIII | TCCGGA | 1 cut(s) | 871 |
| AclWI | GGATC | 7 cut(s) | 466, 602, 615, 771, 785, 1443, 2224 |
| AcoI | YGGCCR | 1 cut(s) | 66 |
| AcsI | RAATTY | 3 cut(s) | 362, 724, 1042 |
| AcuI | CTGAAG | 1 cut(s) | 62 |
| AcyI | GRCGYC | 3 cut(s) | 272, 308, 2178 |
| AfaI | GTAC | 5 cut(s) | 461, 478, 668, 899, 1598 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 2019, 2043, 2071, 2261 |
| AflIII | ACRYGT | 1 cut(s) | 1920 |
| AgeI | ACCGGT | 2 cut(s) | 1056, 1452 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1427 |
| AjiI | CACGTC | 1 cut(s) | 1923 |
| AjnI | CCWGG | 1 cut(s) | 572 |
| Alw21I | GWGCWC | 2 cut(s) | 282, 1380 |
| Alw26I | GTCTC | 8 cut(s) | 396, 534, 953, 1196, 1337, 1393, 1435, 2020 |
| AlwI | GGATC | 7 cut(s) | 466, 602, 615, 771, 785, 1443, 2224 |
| Ama87I | CYCGRG | 1 cut(s) | 2017 |
| Aor13HI | TCCGGA | 1 cut(s) | 871 |
| AoxI | GGCC | 4 cut(s) | 66, 1088, 1327, 2010 |
| ApeKI | GCWGC | 7 cut(s) | 292, 485, 715, 718, 771, 1734, 1897 |
| ApoI | RAATTY | 3 cut(s) | 362, 724, 1042 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1802, 1834 |
| AsiGI | ACCGGT | 2 cut(s) | 1056, 1452 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 845 |
| AspLEI | GCGC | 2 cut(s) | 1734, 2278 |
| AspS9I | GGNCC | 4 cut(s) | 678, 1328, 2046, 2122 |
| AsuC2I | CCSGG | 2 cut(s) | 1012, 2066 |
| AsuII | TTCGAA | 2 cut(s) | 360, 1850 |
| AvaI | CYCGRG | 1 cut(s) | 2017 |
| AvaII | GGWCC | 3 cut(s) | 678, 2046, 2122 |
| AxyI | CCTNAGG | 1 cut(s) | 1494 |
| BamHI | GGATCC | 1 cut(s) | 607 |
| BanII | GRGCYC | 2 cut(s) | 282, 1223 |
| BauI | CACGAG | 1 cut(s) | 376 |
| BbsI | GAAGAC | 3 cut(s) | 992, 2091, 2287 |
| Bbv12I | GWGCWC | 2 cut(s) | 282, 1380 |
| BbvCI | CCTCAGC | 1 cut(s) | 920 |
| BbvI | GCAGC | 7 cut(s) | 279, 472, 727, 730, 758, 1746, 1909 |
| BccI | CCATC | 3 cut(s) | 49, 1575, 1753 |
| BceAI | ACGGC | 8 cut(s) | 157, 295, 1075, 1494, 1987, 1997, 2161, 2165 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1779, 1813 |
| BciT130I | CCWGG | 1 cut(s) | 574 |
| BclI | TGATCA | 1 cut(s) | 1753 |
| BcnI | CCSGG | 2 cut(s) | 1012, 2066 |
| BcoDI | GTCTC | 8 cut(s) | 396, 534, 953, 1196, 1337, 1393, 1435, 2020 |
| BfaI | CTAG | 2 cut(s) | 561, 780 |
| BfoI | RGCGCY | 1 cut(s) | 2279 |
| BglII | AGATCT | 4 cut(s) | 81, 632, 661, 2236 |
| Bme1390I | CCNGG | 3 cut(s) | 574, 1012, 2066 |
| Bme18I | GGWCC | 3 cut(s) | 678, 2046, 2122 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1427 |
| BmeT110I | CYCGRG | 1 cut(s) | 2017 |
| BmgBI | CACGTC | 1 cut(s) | 1923 |
| BmgT120I | GGNCC | 4 cut(s) | 678, 1328, 2046, 2122 |
| BmiI | GGNNCC | 4 cut(s) | 300, 609, 876, 1253 |
| BmrFI | CCNGG | 3 cut(s) | 574, 1012, 2066 |
| BmrI | ACTGGG | 1 cut(s) | 18 |
| BmuI | ACTGGG | 1 cut(s) | 18 |
| BpiI | GAAGAC | 3 cut(s) | 992, 2091, 2287 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1375, 1407 |
| BpmI | CTGGAG | 2 cut(s) | 230, 1910 |
| Bpu10I | CCTNAGC | 1 cut(s) | 920 |
| Bpu14I | TTCGAA | 2 cut(s) | 360, 1850 |
| BpuEI | CTTGAG | 1 cut(s) | 1892 |
| BpuMI | CCSGG | 2 cut(s) | 1012, 2066 |
| BsaHI | GRCGYC | 3 cut(s) | 272, 308, 2178 |
| BsaI | GGTCTC | 1 cut(s) | 1435 |
| BsaJI | CCNNGG | 9 cut(s) | 302, 410, 438, 674, 681, 1223, 1407, 1460, 2003 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1046, 1076 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 2019, 2043, 2071, 2261 |
| Bse118I | RCCGGY | 5 cut(s) | 68, 1056, 1196, 1452, 1989 |
| Bse1I | ACTGG | 4 cut(s) | 13, 213, 1287, 1721 |
| Bse21I | CCTNAGG | 1 cut(s) | 1494 |
| Bse3DI | GCAATG | 3 cut(s) | 567, 754, 1221 |
| BseAI | TCCGGA | 1 cut(s) | 871 |
| BseBI | CCWGG | 1 cut(s) | 574 |
| BseDI | CCNNGG | 9 cut(s) | 302, 410, 438, 674, 681, 1223, 1407, 1460, 2003 |
| BseGI | GGATG | 3 cut(s) | 930, 1534, 2080 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 2019, 2043, 2071, 2261 |
| BseMI | GCAATG | 3 cut(s) | 567, 754, 1221 |
| BseMII | CTCAG | 3 cut(s) | 911, 1473, 1566 |
| BseNI | ACTGG | 4 cut(s) | 13, 213, 1287, 1721 |
| BseRI | GAGGAG | 3 cut(s) | 1338, 1607, 1624 |
| BseXI | GCAGC | 7 cut(s) | 279, 472, 727, 730, 758, 1746, 1909 |
| BseYI | CCCAGC | 1 cut(s) | 2148 |
| BsgI | GTGCAG | 1 cut(s) | 854 |
| Bsh1236I | CGCG | 2 cut(s) | 190, 1187 |
| Bsh1285I | CGRYCG | 5 cut(s) | 91, 1057, 1427, 1984, 2166 |
| BshFI | GGCC | 4 cut(s) | 68, 1090, 1329, 2012 |
| BshTI | ACCGGT | 2 cut(s) | 1056, 1452 |
| BsiEI | CGRYCG | 5 cut(s) | 91, 1057, 1427, 1984, 2166 |
| BsiHKAI | GWGCWC | 2 cut(s) | 282, 1380 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2017 |
| BslFI | GGGAC | 1 cut(s) | 597 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 2019, 2043, 2071, 2261 |
| BsmAI | GTCTC | 8 cut(s) | 396, 534, 953, 1196, 1337, 1393, 1435, 2020 |
| BsmBI | CGTCTC | 3 cut(s) | 1196, 1337, 2020 |
| BsmFI | GGGAC | 1 cut(s) | 597 |
| BsnI | GGCC | 4 cut(s) | 68, 1090, 1329, 2012 |
| Bso31I | GGTCTC | 1 cut(s) | 1435 |
| BsoBI | CYCGRG | 1 cut(s) | 2017 |
| Bsp119I | TTCGAA | 2 cut(s) | 360, 1850 |
| Bsp1286I | GDGCHC | 3 cut(s) | 282, 1223, 1380 |
| Bsp13I | TCCGGA | 1 cut(s) | 871 |
| BspANI | GGCC | 4 cut(s) | 68, 1090, 1329, 2012 |
| BspCNI | CTCAG | 3 cut(s) | 912, 1474, 1567 |
| BspEI | TCCGGA | 1 cut(s) | 871 |
| BspFNI | CGCG | 2 cut(s) | 190, 1187 |
| BspLI | GGNNCC | 4 cut(s) | 300, 609, 876, 1253 |
| BspPI | GGATC | 7 cut(s) | 466, 602, 615, 771, 785, 1443, 2224 |
| BspQI | GCTCTTC | 2 cut(s) | 725, 836 |
| BspT104I | TTCGAA | 2 cut(s) | 360, 1850 |
| BspTNI | GGTCTC | 1 cut(s) | 1435 |
| BsrBI | CCGCTC | 2 cut(s) | 555, 1234 |
| BsrDI | GCAATG | 3 cut(s) | 567, 754, 1221 |
| BsrFI | RCCGGY | 5 cut(s) | 68, 1056, 1196, 1452, 1989 |
| BsrI | ACTGG | 4 cut(s) | 13, 213, 1287, 1721 |
| BssAI | RCCGGY | 5 cut(s) | 68, 1056, 1196, 1452, 1989 |
| BssECI | CCNNGG | 9 cut(s) | 302, 410, 438, 674, 681, 1223, 1407, 1460, 2003 |
| BssNI | GRCGYC | 3 cut(s) | 272, 308, 2178 |
| BssSI | CACGAG | 1 cut(s) | 376 |
| BssT1I | CCWWGG | 2 cut(s) | 1223, 1407 |
| Bst2BI | CACGAG | 1 cut(s) | 376 |
| Bst2UI | CCWGG | 1 cut(s) | 574 |
| Bst6I | CTCTTC | 5 cut(s) | 348, 354, 725, 836, 908 |
| BstACI | GRCGYC | 3 cut(s) | 272, 308, 2178 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 741, 1787 |
| BstBI | TTCGAA | 2 cut(s) | 360, 1850 |
| BstC8I | GCNNGC | 5 cut(s) | 70, 557, 1198, 1236, 1280 |
| BstDEI | CTNAG | 4 cut(s) | 920, 1482, 1494, 1575 |
| BstDSI | CCRYGG | 5 cut(s) | 302, 438, 674, 681, 2003 |
| BstEII | GGTNACC | 1 cut(s) | 1455 |
| BstF5I | GGATG | 3 cut(s) | 930, 1534, 2080 |
| BstFNI | CGCG | 2 cut(s) | 190, 1187 |
| BstH2I | RGCGCY | 1 cut(s) | 2279 |
| BstHHI | GCGC | 2 cut(s) | 1734, 2278 |
| BstMAI | GTCTC | 8 cut(s) | 396, 534, 953, 1196, 1337, 1393, 1435, 2020 |
| BstMCI | CGRYCG | 5 cut(s) | 91, 1057, 1427, 1984, 2166 |
| BstNI | CCWGG | 1 cut(s) | 574 |
| BstNSI | RCATGY | 1 cut(s) | 409 |
| BstPI | GGTNACC | 1 cut(s) | 1455 |
| BstSCI | CCNGG | 3 cut(s) | 572, 1010, 2064 |
| BstUI | CGCG | 2 cut(s) | 190, 1187 |
| BstV1I | GCAGC | 7 cut(s) | 279, 472, 727, 730, 758, 1746, 1909 |
| BstV2I | GAAGAC | 3 cut(s) | 992, 2091, 2287 |
| BstX2I | RGATCY | 7 cut(s) | 81, 471, 607, 632, 661, 790, 2236 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 580 |
| BstYI | RGATCY | 7 cut(s) | 81, 471, 607, 632, 661, 790, 2236 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1494 |
| BsuRI | GGCC | 4 cut(s) | 68, 1090, 1329, 2012 |
| BtgI | CCRYGG | 5 cut(s) | 302, 438, 674, 681, 2003 |
| BtrI | CACGTC | 1 cut(s) | 1923 |
| BtsCI | GGATG | 3 cut(s) | 930, 1534, 2080 |
| BtsIMutI | CAGTG | 3 cut(s) | 1377, 1572, 1728 |
| Cac8I | GCNNGC | 5 cut(s) | 70, 557, 1198, 1236, 1280 |
| CfoI | GCGC | 2 cut(s) | 1734, 2278 |
| Cfr10I | RCCGGY | 5 cut(s) | 68, 1056, 1196, 1452, 1989 |
| Cfr13I | GGNCC | 4 cut(s) | 678, 1328, 2046, 2122 |
| CpoI | CGGWCCG | 1 cut(s) | 678 |
| CseI | GACGC | 9 cut(s) | 261, 316, 452, 553, 627, 1354, 1945, 2144, 2186 |
| Csp6I | GTAC | 5 cut(s) | 460, 477, 667, 898, 1597 |
| CspAI | ACCGGT | 2 cut(s) | 1056, 1452 |
| CspI | CGGWCCG | 1 cut(s) | 678 |
| CviAII | CATG | 4 cut(s) | 64, 235, 406, 1543 |
| CviQI | GTAC | 5 cut(s) | 460, 477, 667, 898, 1597 |
| DdeI | CTNAG | 4 cut(s) | 920, 1482, 1494, 1575 |
| DrdI | GACNNNNNNGTC | 4 cut(s) | 313, 1453, 2032, 2162 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1427 |
| DseDI | GACNNNNNNGTC | 4 cut(s) | 313, 1453, 2032, 2162 |
| EaeI | YGGCCR | 1 cut(s) | 66 |
| Eam1104I | CTCTTC | 5 cut(s) | 348, 354, 725, 836, 908 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1427 |
| EarI | CTCTTC | 5 cut(s) | 348, 354, 725, 836, 908 |
| EciI | GGCGGA | 2 cut(s) | 875, 1253 |
| Ecl136II | GAGCTC | 1 cut(s) | 280 |
| Eco130I | CCWWGG | 2 cut(s) | 1223, 1407 |
| Eco24I | GRGCYC | 2 cut(s) | 282, 1223 |
| Eco31I | GGTCTC | 1 cut(s) | 1435 |
| Eco32I | GATATC | 2 cut(s) | 198, 1768 |
| Eco47I | GGWCC | 3 cut(s) | 678, 2046, 2122 |
| Eco53kI | GAGCTC | 1 cut(s) | 280 |
| Eco57I | CTGAAG | 1 cut(s) | 62 |
| Eco81I | CCTNAGG | 1 cut(s) | 1494 |
| Eco88I | CYCGRG | 1 cut(s) | 2017 |
| Eco91I | GGTNACC | 1 cut(s) | 1455 |
| EcoICRI | GAGCTC | 1 cut(s) | 280 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2122 |
| EcoO65I | GGTNACC | 1 cut(s) | 1455 |
| EcoRI | GAATTC | 1 cut(s) | 362 |
| EcoRII | CCWGG | 1 cut(s) | 572 |
| EcoRV | GATATC | 2 cut(s) | 198, 1768 |
| EcoT14I | CCWWGG | 2 cut(s) | 1223, 1407 |
| EcoT38I | GRGCYC | 2 cut(s) | 282, 1223 |
| ErhI | CCWWGG | 2 cut(s) | 1223, 1407 |
| Esp3I | CGTCTC | 3 cut(s) | 1196, 1337, 2020 |
| FaeI | CATG | 4 cut(s) | 67, 238, 409, 1546 |
| FalI | AAGNNNNNCTT | 7 cut(s) | 833, 865, 987, 1019, 1940, 1972, 2279 |
| FaqI | GGGAC | 1 cut(s) | 597 |
| FatI | CATG | 4 cut(s) | 63, 234, 405, 1542 |
| FauI | CCCGC | 4 cut(s) | 183, 1201, 1227, 2122 |
| FbaI | TGATCA | 1 cut(s) | 1753 |
| FblI | GTMKAC | 1 cut(s) | 1050 |
| FokI | GGATG | 3 cut(s) | 937, 1541, 2087 |
| FriOI | GRGCYC | 2 cut(s) | 282, 1223 |
| FspBI | CTAG | 2 cut(s) | 561, 780 |
| GlaI | GCGC | 2 cut(s) | 1733, 2277 |
| GsaI | CCCAGC | 1 cut(s) | 2152 |
| GsuI | CTGGAG | 2 cut(s) | 230, 1910 |
| HaeII | RGCGCY | 1 cut(s) | 2279 |
| HaeIII | GGCC | 4 cut(s) | 68, 1090, 1329, 2012 |
| HgaI | GACGC | 9 cut(s) | 261, 316, 452, 553, 627, 1354, 1945, 2144, 2186 |
| HhaI | GCGC | 2 cut(s) | 1734, 2278 |
| Hin1I | GRCGYC | 3 cut(s) | 272, 308, 2178 |
| Hin1II | CATG | 4 cut(s) | 67, 238, 409, 1546 |
| Hin6I | GCGC | 2 cut(s) | 1732, 2276 |
| HinP1I | GCGC | 2 cut(s) | 1732, 2276 |
| HindIII | AAGCTT | 3 cut(s) | 623, 981, 1153 |
| Hpy166II | GTNNAC | 7 cut(s) | 442, 514, 655, 685, 898, 1051, 1399 |
| Hpy8I | GTNNAC | 7 cut(s) | 442, 514, 655, 685, 898, 1051, 1399 |
| HpyAV | CCTTC | 9 cut(s) | 150, 249, 365, 460, 1158, 1579, 1598, 2002, 2113 |
| HpyCH4IV | ACGT | 3 cut(s) | 183, 1205, 1922 |
| HpyCH4V | TGCA | 6 cut(s) | 19, 63, 774, 835, 1660, 1790 |
| HpyF3I | CTNAG | 4 cut(s) | 920, 1482, 1494, 1575 |
| HpySE526I | ACGT | 3 cut(s) | 183, 1205, 1922 |
| Hsp92I | GRCGYC | 3 cut(s) | 272, 308, 2178 |
| Hsp92II | CATG | 4 cut(s) | 67, 238, 409, 1546 |
| HspAI | GCGC | 2 cut(s) | 1732, 2276 |
| Kpn2I | TCCGGA | 1 cut(s) | 871 |
| KroI | GCCGGC | 2 cut(s) | 68, 1196 |
| KroNI | GCCGGC | 2 cut(s) | 70, 1198 |
| Ksp22I | TGATCA | 1 cut(s) | 1753 |
| LguI | GCTCTTC | 2 cut(s) | 725, 836 |
| Lsp1109I | GCAGC | 7 cut(s) | 279, 472, 727, 730, 758, 1746, 1909 |
| MaeI | CTAG | 2 cut(s) | 561, 780 |
| MaeII | ACGT | 3 cut(s) | 183, 1205, 1922 |
| MaeIII | GTNAC | 6 cut(s) | 162, 1455, 1628, 1985, 2132, 2153 |
| MbiI | CCGCTC | 2 cut(s) | 555, 1234 |
| MfeI | CAATTG | 2 cut(s) | 531, 1994 |
| MflI | RGATCY | 7 cut(s) | 81, 471, 607, 632, 661, 790, 2236 |
| MhlI | GDGCHC | 3 cut(s) | 282, 1223, 1380 |
| MluCI | AATT | 8 cut(s) | 362, 531, 694, 724, 1042, 1852, 1994, 2257 |
| MlyI | GAGTC | 9 cut(s) | 579, 653, 1395, 1483, 1621, 1675, 1679, 1805, 1862 |
| MmeI | TCCRAC | 6 cut(s) | 234, 255, 297, 1779, 1830, 2199 |
| MreI | CGCCGGCG | 1 cut(s) | 1196 |
| MroI | TCCGGA | 1 cut(s) | 871 |
| MroNI | GCCGGC | 2 cut(s) | 68, 1196 |
| MroXI | GAANNNNTTC | 1 cut(s) | 845 |
| MspA1I | CMGCKG | 1 cut(s) | 292 |
| MspR9I | CCNGG | 3 cut(s) | 574, 1012, 2066 |
| MunI | CAATTG | 2 cut(s) | 531, 1994 |
| MvaI | CCWGG | 1 cut(s) | 574 |
| MvnI | CGCG | 2 cut(s) | 190, 1187 |
| NaeI | GCCGGC | 2 cut(s) | 70, 1198 |
| NciI | CCSGG | 2 cut(s) | 1012, 2066 |
| NgoMIV | GCCGGC | 2 cut(s) | 68, 1196 |
| NlaIII | CATG | 4 cut(s) | 67, 238, 409, 1546 |
| NlaIV | GGNNCC | 4 cut(s) | 300, 609, 876, 1253 |
| NmeAIII | GCCGAG | 2 cut(s) | 435, 1678 |
| NmuCI | GTSAC | 5 cut(s) | 162, 1455, 1628, 2132, 2153 |
| NspI | RCATGY | 1 cut(s) | 409 |
| NspV | TTCGAA | 2 cut(s) | 360, 1850 |
| PaeR7I | CTCGAG | 1 cut(s) | 2017 |
| PciSI | GCTCTTC | 2 cut(s) | 725, 836 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 383, 1977, 2172 |
| PdiI | GCCGGC | 2 cut(s) | 70, 1198 |
| PdmI | GAANNNNTTC | 1 cut(s) | 845 |
| PflFI | GACNNNGTC | 1 cut(s) | 310 |
| PfoI | TCCNGGA | 2 cut(s) | 1010, 2064 |
| PinAI | ACCGGT | 2 cut(s) | 1056, 1452 |
| Ple19I | CGATCG | 1 cut(s) | 91 |
| PleI | GAGTC | 9 cut(s) | 579, 652, 1394, 1483, 1620, 1674, 1679, 1804, 1862 |
| PpsI | GAGTC | 9 cut(s) | 579, 652, 1394, 1483, 1620, 1674, 1679, 1804, 1862 |
| PpuMI | RGGWCCY | 1 cut(s) | 2122 |
| Psp124BI | GAGCTC | 1 cut(s) | 282 |
| Psp5II | RGGWCCY | 1 cut(s) | 2122 |
| Psp6I | CCWGG | 1 cut(s) | 572 |
| PspEI | GGTNACC | 1 cut(s) | 1455 |
| PspFI | CCCAGC | 1 cut(s) | 2148 |
| PspGI | CCWGG | 1 cut(s) | 572 |
| PspN4I | GGNNCC | 4 cut(s) | 300, 609, 876, 1253 |
| PspPI | GGNCC | 4 cut(s) | 678, 1328, 2046, 2122 |
| PspPPI | RGGWCCY | 1 cut(s) | 2122 |
| PsuI | RGATCY | 7 cut(s) | 81, 471, 607, 632, 661, 790, 2236 |
| PsyI | GACNNNGTC | 1 cut(s) | 310 |
| PvuI | CGATCG | 1 cut(s) | 91 |
| RsaI | GTAC | 5 cut(s) | 461, 478, 668, 899, 1598 |
| RsaNI | GTAC | 5 cut(s) | 460, 477, 667, 898, 1597 |
| Rsr2I | CGGWCCG | 1 cut(s) | 678 |
| RsrII | CGGWCCG | 1 cut(s) | 678 |
| SacI | GAGCTC | 1 cut(s) | 282 |
| SapI | GCTCTTC | 2 cut(s) | 725, 836 |
| Sau96I | GGNCC | 4 cut(s) | 678, 1328, 2046, 2122 |
| SchI | GAGTC | 9 cut(s) | 579, 653, 1395, 1483, 1621, 1675, 1679, 1805, 1862 |
| ScrFI | CCNGG | 3 cut(s) | 574, 1012, 2066 |
| SduI | GDGCHC | 3 cut(s) | 282, 1223, 1380 |
| Sfr274I | CTCGAG | 1 cut(s) | 2017 |
| SfuI | TTCGAA | 2 cut(s) | 360, 1850 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1196 |
| SinI | GGWCC | 3 cut(s) | 678, 2046, 2122 |
| SlaI | CTCGAG | 1 cut(s) | 2017 |
| SmlI | CTYRAG | 2 cut(s) | 1907, 2017 |
| SmoI | CTYRAG | 2 cut(s) | 1907, 2017 |
| Sse9I | AATT | 8 cut(s) | 362, 531, 694, 724, 1042, 1852, 1994, 2257 |
| SspMI | CTAG | 2 cut(s) | 561, 780 |
| SstI | GAGCTC | 1 cut(s) | 282 |
| StyD4I | CCNGG | 3 cut(s) | 572, 1010, 2064 |
| StyI | CCWWGG | 2 cut(s) | 1223, 1407 |
| TaiI | ACGT | 3 cut(s) | 186, 1208, 1925 |
| TaqII | GACCGA | 2 cut(s) | 1417, 2152 |
| TasI | AATT | 8 cut(s) | 362, 531, 694, 724, 1042, 1852, 1994, 2257 |
| TatI | WGTACW | 1 cut(s) | 1596 |
| TauI | GCSGC | 5 cut(s) | 601, 747, 1124, 1147, 2002 |
| TscAI | CASTG | 3 cut(s) | 1377, 1579, 1728 |
| TseFI | GTSAC | 5 cut(s) | 162, 1455, 1628, 2132, 2153 |
| TseI | GCWGC | 7 cut(s) | 292, 485, 715, 718, 771, 1734, 1897 |
| Tsp45I | GTSAC | 5 cut(s) | 162, 1455, 1628, 2132, 2153 |
| TspDTI | ATGAA | 3 cut(s) | 954, 1742, 2091 |
| TspGWI | ACGGA | 5 cut(s) | 319, 464, 540, 552, 670 |
| TspRI | CASTG | 3 cut(s) | 1377, 1579, 1728 |
| Tth111I | GACNNNGTC | 1 cut(s) | 310 |
| VpaK11BI | GGWCC | 3 cut(s) | 678, 2046, 2122 |
| XapI | RAATTY | 3 cut(s) | 362, 724, 1042 |
| XceI | RCATGY | 1 cut(s) | 409 |
| XhoI | CTCGAG | 1 cut(s) | 2017 |
| XmiI | GTMKAC | 1 cut(s) | 1050 |
| XmnI | GAANNNNTTC | 1 cut(s) | 845 |
| XspI | CTAG | 2 cut(s) | 561, 780 |