NHL repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0393221 RchiOBHm_Chr7g0198871 |
| rosa_samantha | Rh2BG191000 Rh5AG337400 Rh6BG065300 Rh6CG219600 Rh6CG399700 Rh7AG443700 Rh7CG353200 Rh7DG212800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 250 |
| AcoI | YGGCCR | 1 cut(s) | 157 |
| AcsI | RAATTY | 1 cut(s) | 168 |
| AfaI | GTAC | 1 cut(s) | 295 |
| AgsI | TTSAA | 2 cut(s) | 11, 37 |
| AluBI | AGCT | 2 cut(s) | 188, 253 |
| AluI | AGCT | 2 cut(s) | 188, 253 |
| AlwI | GGATC | 1 cut(s) | 250 |
| AoxI | GGCC | 2 cut(s) | 48, 157 |
| ApeKI | GCWGC | 1 cut(s) | 257 |
| ApoI | RAATTY | 1 cut(s) | 168 |
| AsuHPI | GGTGA | 2 cut(s) | 77, 227 |
| BalI | TGGCCA | 1 cut(s) | 159 |
| BauI | CACGAG | 1 cut(s) | 299 |
| BbvI | GCAGC | 1 cut(s) | 269 |
| BccI | CCATC | 2 cut(s) | 185, 212 |
| BfaI | CTAG | 1 cut(s) | 201 |
| BisI | GCNGC | 1 cut(s) | 258 |
| BlsI | GCNGC | 1 cut(s) | 259 |
| BsaJI | CCNNGG | 2 cut(s) | 104, 150 |
| Bse1I | ACTGG | 1 cut(s) | 125 |
| BseDI | CCNNGG | 2 cut(s) | 104, 150 |
| BseGI | GGATG | 2 cut(s) | 115, 121 |
| BseNI | ACTGG | 1 cut(s) | 125 |
| BseXI | GCAGC | 1 cut(s) | 269 |
| BshFI | GGCC | 2 cut(s) | 50, 159 |
| BsmI | GAATGC | 1 cut(s) | 64 |
| BsnI | GGCC | 2 cut(s) | 50, 159 |
| Bsp143I | GATC | 1 cut(s) | 242 |
| Bsp19I | CCATGG | 2 cut(s) | 104, 150 |
| BspANI | GGCC | 2 cut(s) | 50, 159 |
| BspHI | TCATGA | 1 cut(s) | 306 |
| BspPI | GGATC | 1 cut(s) | 250 |
| BsrI | ACTGG | 1 cut(s) | 125 |
| BssECI | CCNNGG | 2 cut(s) | 104, 150 |
| BssMI | GATC | 1 cut(s) | 242 |
| BssSI | CACGAG | 1 cut(s) | 299 |
| BssT1I | CCWWGG | 2 cut(s) | 104, 150 |
| Bst2BI | CACGAG | 1 cut(s) | 299 |
| BstC8I | GCNNGC | 3 cut(s) | 157, 255, 315 |
| BstDSI | CCRYGG | 2 cut(s) | 104, 150 |
| BstF5I | GGATG | 2 cut(s) | 115, 121 |
| BstKTI | GATC | 1 cut(s) | 245 |
| BstMBI | GATC | 1 cut(s) | 242 |
| BstV1I | GCAGC | 1 cut(s) | 269 |
| BsuRI | GGCC | 2 cut(s) | 50, 159 |
| BtgI | CCRYGG | 2 cut(s) | 104, 150 |
| BtsCI | GGATG | 2 cut(s) | 115, 121 |
| BtsI | GCAGTG | 1 cut(s) | 69 |
| BtsIMutI | CAGTG | 1 cut(s) | 69 |
| Cac8I | GCNNGC | 3 cut(s) | 157, 255, 315 |
| CciI | TCATGA | 1 cut(s) | 306 |
| Csp6I | GTAC | 1 cut(s) | 294 |
| CviAII | CATG | 3 cut(s) | 105, 151, 307 |
| CviJI | RGCY | 5 cut(s) | 50, 155, 159, 188, 253 |
| CviKI_1 | RGCY | 5 cut(s) | 50, 155, 159, 188, 253 |
| CviQI | GTAC | 1 cut(s) | 294 |
| DpnI | GATC | 1 cut(s) | 244 |
| DpnII | GATC | 1 cut(s) | 242 |
| EaeI | YGGCCR | 1 cut(s) | 157 |
| Eco130I | CCWWGG | 2 cut(s) | 104, 150 |
| EcoT14I | CCWWGG | 2 cut(s) | 104, 150 |
| ErhI | CCWWGG | 2 cut(s) | 104, 150 |
| FaeI | CATG | 3 cut(s) | 108, 154, 310 |
| FaiI | YATR | 9 cut(s) | 75, 106, 144, 152, 225, 262, 284, 286, 308 |
| FatI | CATG | 3 cut(s) | 104, 150, 306 |
| Fnu4HI | GCNGC | 1 cut(s) | 258 |
| FokI | GGATG | 2 cut(s) | 108, 122 |
| Fsp4HI | GCNGC | 1 cut(s) | 258 |
| FspBI | CTAG | 1 cut(s) | 201 |
| GluI | GCNGC | 1 cut(s) | 258 |
| HaeIII | GGCC | 2 cut(s) | 50, 159 |
| Hin1II | CATG | 3 cut(s) | 108, 154, 310 |
| HphI | GGTGA | 2 cut(s) | 77, 227 |
| Hpy166II | GTNNAC | 1 cut(s) | 294 |
| Hpy188I | TCNGA | 2 cut(s) | 237, 342 |
| Hpy188III | TCNNGA | 3 cut(s) | 11, 299, 307 |
| Hpy8I | GTNNAC | 1 cut(s) | 294 |
| HpyAV | CCTTC | 1 cut(s) | 31 |
| HpyCH4V | TGCA | 2 cut(s) | 62, 272 |
| Hsp92II | CATG | 3 cut(s) | 108, 154, 310 |
| Kzo9I | GATC | 1 cut(s) | 242 |
| LmnI | GCTCC | 1 cut(s) | 343 |
| LpnPI | CCDG | 3 cut(s) | 138, 141, 302 |
| Lsp1109I | GCAGC | 1 cut(s) | 269 |
| MaeI | CTAG | 1 cut(s) | 201 |
| MaeIII | GTNAC | 1 cut(s) | 66 |
| MalI | GATC | 1 cut(s) | 244 |
| MboI | GATC | 1 cut(s) | 242 |
| MboII | GAAGA | 1 cut(s) | 269 |
| MlsI | TGGCCA | 1 cut(s) | 159 |
| MluCI | AATT | 3 cut(s) | 26, 168, 273 |
| MluNI | TGGCCA | 1 cut(s) | 159 |
| MnlI | CCTC | 2 cut(s) | 40, 295 |
| Mox20I | TGGCCA | 1 cut(s) | 159 |
| MscI | TGGCCA | 1 cut(s) | 159 |
| Msp20I | TGGCCA | 1 cut(s) | 159 |
| MspA1I | CMGCKG | 1 cut(s) | 188 |
| Mva1269I | GAATGC | 1 cut(s) | 64 |
| NcoI | CCATGG | 2 cut(s) | 104, 150 |
| NdeII | GATC | 1 cut(s) | 242 |
| NlaIII | CATG | 3 cut(s) | 108, 154, 310 |
| PagI | TCATGA | 1 cut(s) | 306 |
| PctI | GAATGC | 1 cut(s) | 64 |
| PkrI | GCNGC | 1 cut(s) | 259 |
| PvuII | CAGCTG | 1 cut(s) | 188 |
| RsaI | GTAC | 1 cut(s) | 295 |
| RsaNI | GTAC | 1 cut(s) | 294 |
| SatI | GCNGC | 1 cut(s) | 258 |
| Sau3AI | GATC | 1 cut(s) | 242 |
| SetI | ASST | 5 cut(s) | 190, 255, 291, 306, 350 |
| Sse9I | AATT | 3 cut(s) | 26, 168, 273 |
| SspMI | CTAG | 1 cut(s) | 201 |
| StyI | CCWWGG | 2 cut(s) | 104, 150 |
| TasI | AATT | 3 cut(s) | 26, 168, 273 |
| TatI | WGTACW | 1 cut(s) | 293 |
| TscAI | CASTG | 1 cut(s) | 69 |
| TseI | GCWGC | 1 cut(s) | 257 |
| TspDTI | ATGAA | 3 cut(s) | 110, 240, 323 |
| TspRI | CASTG | 1 cut(s) | 69 |
| XapI | RAATTY | 1 cut(s) | 168 |
| XspI | CTAG | 1 cut(s) | 201 |