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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g10700 |
| rosa_chinensis | RchiOBHm_Chr4g0438801 |
| rosa_laevigata | RLG00000015020 |
| rosa_multiflora | Rmu_sc0005439.1_g000002 |
| rosa_roxburghii | Rroxscaffold_7G00211900 Rroxscaffold_7G00211910 |
| rosa_rugosa | Rorug05G0544100 Rorug05G0544200 |
| rosa_samantha | Rh4AG364200 Rh4DG369900 Rh6AG059100 Rh6BG052600 Rh6CG050300 Rh6DG047000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 23 |
| Acc36I | ACCTGC | 1 cut(s) | 481 |
| AccI | GTMKAC | 2 cut(s) | 27, 505 |
| AciI | CCGC | 4 cut(s) | 21, 230, 336, 358 |
| AclWI | GGATC | 1 cut(s) | 129 |
| AcuI | CTGAAG | 1 cut(s) | 120 |
| AcyI | GRCGYC | 1 cut(s) | 24 |
| AfaI | GTAC | 3 cut(s) | 312, 495, 586 |
| AgsI | TTSAA | 4 cut(s) | 184, 207, 307, 537 |
| Alw21I | GWGCWC | 1 cut(s) | 265 |
| Alw26I | GTCTC | 1 cut(s) | 280 |
| AlwI | GGATC | 1 cut(s) | 129 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 496 |
| AoxI | GGCC | 1 cut(s) | 166 |
| ApeKI | GCWGC | 1 cut(s) | 254 |
| AsuC2I | CCSGG | 1 cut(s) | 150 |
| AsuHPI | GGTGA | 1 cut(s) | 42 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 227, 259 |
| BbsI | GAAGAC | 2 cut(s) | 21, 235 |
| Bbv12I | GWGCWC | 1 cut(s) | 265 |
| BbvI | GCAGC | 1 cut(s) | 241 |
| BceAI | ACGGC | 1 cut(s) | 401 |
| BcnI | CCSGG | 1 cut(s) | 150 |
| BcoDI | GTCTC | 1 cut(s) | 280 |
| BfmI | CTRYAG | 1 cut(s) | 291 |
| BfuAI | ACCTGC | 1 cut(s) | 481 |
| BisI | GCNGC | 3 cut(s) | 22, 255, 336 |
| BlsI | GCNGC | 3 cut(s) | 23, 256, 337 |
| BmcAI | AGTACT | 1 cut(s) | 312 |
| Bme1390I | CCNGG | 1 cut(s) | 150 |
| BmrFI | CCNGG | 1 cut(s) | 150 |
| BpiI | GAAGAC | 2 cut(s) | 21, 235 |
| BpuMI | CCSGG | 1 cut(s) | 150 |
| BsaHI | GRCGYC | 1 cut(s) | 24 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 211, 241 |
| Bse1I | ACTGG | 3 cut(s) | 123, 201, 519 |
| Bse3DI | GCAATG | 1 cut(s) | 103 |
| BseGI | GGATG | 1 cut(s) | 91 |
| BseMI | GCAATG | 1 cut(s) | 103 |
| BseNI | ACTGG | 3 cut(s) | 123, 201, 519 |
| BseXI | GCAGC | 1 cut(s) | 241 |
| BsgI | GTGCAG | 1 cut(s) | 573 |
| BshFI | GGCC | 1 cut(s) | 168 |
| BsiHKAI | GWGCWC | 1 cut(s) | 265 |
| BsiSI | CCGG | 1 cut(s) | 149 |
| BslFI | GGGAC | 1 cut(s) | 40 |
| BsmAI | GTCTC | 1 cut(s) | 280 |
| BsmFI | GGGAC | 1 cut(s) | 40 |
| BsnI | GGCC | 1 cut(s) | 168 |
| Bsp1286I | GDGCHC | 1 cut(s) | 265 |
| Bsp143I | GATC | 2 cut(s) | 103, 121 |
| BspACI | CCGC | 4 cut(s) | 21, 230, 336, 358 |
| BspANI | GGCC | 1 cut(s) | 168 |
| BspMAI | CTGCAG | 1 cut(s) | 295 |
| BspMI | ACCTGC | 1 cut(s) | 481 |
| BspPI | GGATC | 1 cut(s) | 129 |
| BsrDI | GCAATG | 1 cut(s) | 103 |
| BsrI | ACTGG | 3 cut(s) | 123, 201, 519 |
| BssMI | GATC | 2 cut(s) | 103, 121 |
| BssNI | GRCGYC | 1 cut(s) | 24 |
| Bst4CI | ACNGT | 3 cut(s) | 54, 315, 498 |
| BstACI | GRCGYC | 1 cut(s) | 24 |
| BstC8I | GCNNGC | 1 cut(s) | 552 |
| BstF5I | GGATG | 1 cut(s) | 91 |
| BstKTI | GATC | 2 cut(s) | 106, 124 |
| BstMAI | GTCTC | 1 cut(s) | 280 |
| BstMBI | GATC | 2 cut(s) | 103, 121 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 174, 260, 269, 299, 385 |
| BstSCI | CCNGG | 1 cut(s) | 148 |
| BstSFI | CTRYAG | 1 cut(s) | 291 |
| BstV1I | GCAGC | 1 cut(s) | 241 |
| BstV2I | GAAGAC | 2 cut(s) | 21, 235 |
| BstX2I | RGATCY | 1 cut(s) | 121 |
| BstYI | RGATCY | 1 cut(s) | 121 |
| BsuRI | GGCC | 1 cut(s) | 168 |
| BtsCI | GGATG | 1 cut(s) | 91 |
| BtsIMutI | CAGTG | 1 cut(s) | 144 |
| BveI | ACCTGC | 1 cut(s) | 481 |
| Cac8I | GCNNGC | 1 cut(s) | 552 |
| CaiI | CAGNNNCTG | 1 cut(s) | 496 |
| CseI | GACGC | 1 cut(s) | 13 |
| Csp6I | GTAC | 3 cut(s) | 311, 494, 585 |
| CviAII | CATG | 2 cut(s) | 164, 346 |
| CviJI | RGCY | 3 cut(s) | 168, 254, 335 |
| CviKI_1 | RGCY | 3 cut(s) | 168, 254, 335 |
| CviQI | GTAC | 3 cut(s) | 311, 494, 585 |
| DpnI | GATC | 2 cut(s) | 105, 123 |
| DpnII | GATC | 2 cut(s) | 103, 121 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 23 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 23 |
| Eco57I | CTGAAG | 1 cut(s) | 120 |
| FaeI | CATG | 2 cut(s) | 167, 349 |
| FaqI | GGGAC | 1 cut(s) | 40 |
| FatI | CATG | 2 cut(s) | 163, 345 |
| FauI | CCCGC | 1 cut(s) | 351 |
| FblI | GTMKAC | 2 cut(s) | 27, 505 |
| Fnu4HI | GCNGC | 3 cut(s) | 22, 255, 336 |
| FokI | GGATG | 1 cut(s) | 98 |
| Fsp4HI | GCNGC | 3 cut(s) | 22, 255, 336 |
| GluI | GCNGC | 3 cut(s) | 22, 255, 336 |
| HaeIII | GGCC | 1 cut(s) | 168 |
| HapII | CCGG | 1 cut(s) | 149 |
| HgaI | GACGC | 1 cut(s) | 13 |
| Hin1I | GRCGYC | 1 cut(s) | 24 |
| Hin1II | CATG | 2 cut(s) | 167, 349 |
| HincII | GTYRAC | 1 cut(s) | 28 |
| HindII | GTYRAC | 1 cut(s) | 28 |
| HpaII | CCGG | 1 cut(s) | 149 |
| HphI | GGTGA | 1 cut(s) | 42 |
| Hpy166II | GTNNAC | 3 cut(s) | 28, 73, 506 |
| Hpy188I | TCNGA | 1 cut(s) | 248 |
| Hpy188III | TCNNGA | 4 cut(s) | 125, 368, 413, 446 |
| Hpy8I | GTNNAC | 3 cut(s) | 28, 73, 506 |
| Hpy99I | CGWCG | 1 cut(s) | 29 |
| HpyAV | CCTTC | 2 cut(s) | 243, 449 |
| HpyCH4III | ACNGT | 3 cut(s) | 54, 315, 498 |
| HpyCH4V | TGCA | 5 cut(s) | 96, 177, 293, 379, 554 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 174, 260, 269, 299, 385 |
| Hsp92I | GRCGYC | 1 cut(s) | 24 |
| Hsp92II | CATG | 2 cut(s) | 167, 349 |
| Kzo9I | GATC | 2 cut(s) | 103, 121 |
| LmnI | GCTCC | 2 cut(s) | 190, 217 |
| Lsp1109I | GCAGC | 1 cut(s) | 241 |
| MaeIII | GTNAC | 1 cut(s) | 48 |
| MalI | GATC | 2 cut(s) | 105, 123 |
| MboI | GATC | 2 cut(s) | 103, 121 |
| MboII | GAAGA | 3 cut(s) | 17, 26, 235 |
| MflI | RGATCY | 1 cut(s) | 121 |
| MhlI | GDGCHC | 1 cut(s) | 265 |
| MluCI | AATT | 4 cut(s) | 113, 179, 394, 529 |
| MnlI | CCTC | 2 cut(s) | 76, 237 |
| MseI | TTAA | 2 cut(s) | 363, 528 |
| MspA1I | CMGCKG | 1 cut(s) | 21 |
| MspI | CCGG | 1 cut(s) | 149 |
| MspR9I | CCNGG | 1 cut(s) | 150 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 174, 260, 269, 299, 385 |
| NciI | CCSGG | 1 cut(s) | 150 |
| NdeII | GATC | 2 cut(s) | 103, 121 |
| NlaIII | CATG | 2 cut(s) | 167, 349 |
| NmuCI | GTSAC | 1 cut(s) | 48 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 409 |
| PkrI | GCNGC | 3 cut(s) | 23, 256, 337 |
| PstI | CTGCAG | 1 cut(s) | 295 |
| PstNI | CAGNNNCTG | 1 cut(s) | 496 |
| PsuI | RGATCY | 1 cut(s) | 121 |
| RsaI | GTAC | 3 cut(s) | 312, 495, 586 |
| RsaNI | GTAC | 3 cut(s) | 311, 494, 585 |
| SalI | GTCGAC | 1 cut(s) | 26 |
| SaqAI | TTAA | 2 cut(s) | 363, 528 |
| SatI | GCNGC | 3 cut(s) | 22, 255, 336 |
| Sau3AI | GATC | 2 cut(s) | 103, 121 |
| ScaI | AGTACT | 1 cut(s) | 312 |
| ScrFI | CCNGG | 1 cut(s) | 150 |
| SduI | GDGCHC | 1 cut(s) | 265 |
| SetI | ASST | 4 cut(s) | 48, 229, 495, 505 |
| SfcI | CTRYAG | 1 cut(s) | 291 |
| Sse9I | AATT | 4 cut(s) | 113, 179, 394, 529 |
| SsiI | CCGC | 4 cut(s) | 21, 230, 336, 358 |
| StyD4I | CCNGG | 1 cut(s) | 148 |
| TaaI | ACNGT | 3 cut(s) | 54, 315, 498 |
| TaqI | TCGA | 3 cut(s) | 27, 102, 126 |
| TasI | AATT | 4 cut(s) | 113, 179, 394, 529 |
| TatI | WGTACW | 2 cut(s) | 310, 584 |
| TauI | GCSGC | 2 cut(s) | 24, 338 |
| Tru1I | TTAA | 2 cut(s) | 363, 528 |
| Tru9I | TTAA | 2 cut(s) | 363, 528 |
| TscAI | CASTG | 1 cut(s) | 144 |
| TseFI | GTSAC | 1 cut(s) | 48 |
| TseI | GCWGC | 1 cut(s) | 254 |
| Tsp45I | GTSAC | 1 cut(s) | 48 |
| TspDTI | ATGAA | 3 cut(s) | 27, 152, 362 |
| TspRI | CASTG | 1 cut(s) | 144 |
| XmiI | GTMKAC | 2 cut(s) | 27, 505 |
| ZrmI | AGTACT | 1 cut(s) | 312 |