Rh6CG095600

Cell division cycle-associated 7-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0016254
Physical Location & Seq
Forward (+)
10554215 .. 10558084
3870 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG095600.1

Sequence Viewer

Length: 1338 bp
ATGGTGGTTCGGAGCGGAGCCGACGACGGAAGCGCCGAGAATGGAAGCACGGGGGTTTCCGACTACGAGAAAATCAGAGAGCAAAGGATCAAAGAGAACCTGGCCAGAATGCAGAACATGGGCATTTTCGACCTTTCACGCCAGCTCCACTCCTTCAAATCTAACCCTCCCAAACGCCTTCGCCGGAGTCCTCCTTCCGATCAGCCCAAAACCCACAACTCAGTTCCCACAAGACGCTCCTCCAGGTTGCAGAATGTGGCTCCTGTAACCTATGTGGAAACTGTAAGGAATGTCTCAGTTGAACCAAGAAGAAGAGTAAGGAAGGCTTCTCAAAATGCAAGGAACCCCAATGGTGGGAAGAGAAGGACATCAGACACTGAATCAGAGACTGACTCAGAATCAGACTCAGGCTCAGACTTGGAGTTCGACTCTGACTCTGACTCTGAGGTTAAAGTTCGTATACAGATTTCAAATTCTGGGTCTCCACCAAGGCGCTCTTCTAGGTTGAGAGATGTGGCTCCAGTGAGTTATGTGGAAGCTAGTCCTAAAAAGGAGAAAGAGCTGACAGAGAGTGTTGAAGGAGAGTACTTGGTGGATGACTATGGAGAAGATGGGAAACGCATTGATGATGGGGTCAAGGATGAAACTTGTCACCAATGCAGGCAGAGAACTCTGGGCGATCTTACTCATTGCAGCAAATGTGACTTGGTCCAAGGGCAGTTTTGTGGAGATTGCTTGGATATGGGATATGGAGAGAATGTGATTAAAGCCAACCAAAATCCTGATTGGGTTTGCCCTGTTTGTCGGGATATCTGTAACTGCAGTCTCTGCTTGAGTAGGAAGACACAGGAATTAATGCATGATGATATCAATGAAGAAATGGAGGGATGCCTCATGGGGAAAGAGGTGAACTTCTTAGGTAGTGTGCTTGTTCCTACAGAAGACGTGCGCAAGCTAGATGCTGCTACTATTGCTTGTGATGTTGATGGTAAGACAAAGAAAGAACCAAAAAGGAACACGAGCATGATTAGTGCGCATGTTGCTGCAGAAGACATGGACAAGCTAGATGCTGCTGGTGATGTTGTTGATTGTGAGACAAATATAGAATCAAGAAGGAGCACGAGGACAAGTAGTTTGCATGTTGCTGCAGAAGACCTGGGCAACCCAGATGCTGCTGGTGATGTCATTCATGGTGAGACAAAGCAACCAAGAAGGAGCACAAGGAGGAGTAGTGGGCATGTTGCTGCAGAAGACATGAGCCACCTAGATGCTGCTGGTGACGTTGATGGTGAAAAAAAGAAACAACTAAGAAGGAGCACAAGGATGAGGAGGAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-4CXXC_R1

Protein Analysis

445

Amino Acids

49.39

Weight (kDa)

5.91

Isoelectric Point (pI)

62.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-4CXXC_R1 PF10497 213 - 285 6.1e-25 Zinc-finger domain of monoamine-oxidase A repressor R1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 950, 1035
AccBSI CCGCTC 1 cut(s) 15
AccI GTMKAC 1 cut(s) 460
AciI CCGC 1 cut(s) 15
AclWI GGATC 1 cut(s) 95
AcoI YGGCCR 1 cut(s) 102
AcsI RAATTY 1 cut(s) 472
AfaI GTAC 1 cut(s) 587
AfiI CCNNNNNNNGG 2 cut(s) 353, 354
AgsI TTSAA 4 cut(s) 157, 302, 471, 578
AjiI CACGTC 1 cut(s) 946
AjnI CCWGG 3 cut(s) 99, 242, 1155
AjuI GAANNNNNNNTTGG 2 cut(s) 481, 513
AluBI AGCT 5 cut(s) 145, 539, 562, 955, 1063
AluI AGCT 5 cut(s) 145, 539, 562, 955, 1063
Alw21I GWGCWC 3 cut(s) 1121, 1220, 1319
Alw26I GTCTC 6 cut(s) 298, 380, 486, 830, 1088, 1190
AlwI GGATC 1 cut(s) 95
AlwNI CAGNNNCTG 4 cut(s) 377, 389, 828, 1172
AoxI GGCC 1 cut(s) 102
ApeKI GCWGC 8 cut(s) 693, 962, 1043, 1070, 1145, 1172, 1244, 1271
ApoI RAATTY 1 cut(s) 472
ArsI GACNNNNNNTTYG 6 cut(s) 407, 439, 464, 496, 1117, 1149
AseI ATTAAT 1 cut(s) 854
AspLEI GCGC 4 cut(s) 35, 495, 951, 1036
AspS9I GGNCC 1 cut(s) 709
AsuHPI GGTGA 7 cut(s) 644, 919, 1088, 1190, 1205, 1289, 1301
AvaII GGWCC 1 cut(s) 709
BalI TGGCCA 1 cut(s) 104
BauI CACGAG 2 cut(s) 1018, 1120
BbsI GAAGAC 5 cut(s) 848, 948, 1056, 1158, 1257
Bbv12I GWGCWC 3 cut(s) 1121, 1220, 1319
BbvI GCAGC 8 cut(s) 705, 949, 1030, 1057, 1132, 1159, 1231, 1258
BccI CCATC 4 cut(s) 605, 623, 980, 1280
BciT130I CCWGG 3 cut(s) 101, 244, 1157
BcoDI GTCTC 6 cut(s) 298, 380, 486, 830, 1088, 1190
BfaI CTAG 5 cut(s) 501, 540, 956, 1064, 1265
BfmI CTRYAG 5 cut(s) 820, 936, 1044, 1146, 1245
BfoI RGCGCY 2 cut(s) 36, 496
BisI GCNGC 8 cut(s) 694, 963, 1044, 1071, 1146, 1173, 1245, 1272
BlsI GCNGC 8 cut(s) 695, 964, 1045, 1072, 1147, 1174, 1246, 1273
BmcAI AGTACT 1 cut(s) 587
Bme1390I CCNGG 3 cut(s) 101, 244, 1157
Bme18I GGWCC 1 cut(s) 709
BmgBI CACGTC 1 cut(s) 946
BmgT120I GGNCC 1 cut(s) 709
BmiI GGNNCC 4 cut(s) 19, 261, 344, 519
BmrFI CCNGG 3 cut(s) 101, 244, 1157
BmsI GCATC 5 cut(s) 878, 949, 1057, 1159, 1258
BpiI GAAGAC 5 cut(s) 848, 948, 1056, 1158, 1257
BplI GAGNNNNNCTC 4 cut(s) 377, 409, 413, 445
BpmI CTGGAG 2 cut(s) 226, 504
BpuEI CTTGAG 1 cut(s) 853
BsaI GGTCTC 1 cut(s) 486
BsaJI CCNNGG 3 cut(s) 488, 712, 1156
BsaXI ACNNNNNCTCC 6 cut(s) 129, 159, 744, 774, 1216, 1246
Bsc4I CCNNNNNNNGG 2 cut(s) 353, 354
Bse1I ACTGG 1 cut(s) 521
Bse3DI GCAATG 1 cut(s) 688
BseBI CCWGG 3 cut(s) 101, 244, 1157
BseDI CCNNGG 3 cut(s) 488, 712, 1156
BseGI GGATG 4 cut(s) 601, 646, 893, 1329
BseLI CCNNNNNNNGG 2 cut(s) 353, 354
BseMI GCAATG 1 cut(s) 688
BseMII CTCAG 6 cut(s) 234, 309, 408, 420, 426, 435
BseNI ACTGG 1 cut(s) 521
BseRI GAGGAG 2 cut(s) 229, 1240
BseXI GCAGC 8 cut(s) 705, 949, 1030, 1057, 1132, 1159, 1231, 1258
BshFI GGCC 1 cut(s) 104
BsiHKAI GWGCWC 3 cut(s) 1121, 1220, 1319
BsiSI CCGG 1 cut(s) 184
BslI CCNNNNNNNGG 2 cut(s) 353, 354
BsmAI GTCTC 6 cut(s) 298, 380, 486, 830, 1088, 1190
BsmI GAATGC 1 cut(s) 114
BsnI GGCC 1 cut(s) 104
Bso31I GGTCTC 1 cut(s) 486
Bsp1286I GDGCHC 3 cut(s) 1121, 1220, 1319
Bsp143I GATC 3 cut(s) 87, 199, 679
BspACI CCGC 1 cut(s) 15
BspANI GGCC 1 cut(s) 104
BspCNI CTCAG 6 cut(s) 233, 308, 407, 419, 425, 436
BspLI GGNNCC 4 cut(s) 19, 261, 344, 519
BspMAI CTGCAG 4 cut(s) 824, 1048, 1150, 1249
BspPI GGATC 1 cut(s) 95
BspQI GCTCTTC 1 cut(s) 502
BspTNI GGTCTC 1 cut(s) 486
BsrBI CCGCTC 1 cut(s) 15
BsrDI GCAATG 1 cut(s) 688
BsrI ACTGG 1 cut(s) 521
BssECI CCNNGG 3 cut(s) 488, 712, 1156
BssMI GATC 3 cut(s) 87, 199, 679
BssNAI GTATAC 1 cut(s) 461
BssSI CACGAG 2 cut(s) 1018, 1120
BssT1I CCWWGG 2 cut(s) 488, 712
Bst1107I GTATAC 1 cut(s) 461
Bst2BI CACGAG 2 cut(s) 1018, 1120
Bst2UI CCWGG 3 cut(s) 101, 244, 1157
Bst4CI ACNGT 1 cut(s) 283
Bst6I CTCTTC 3 cut(s) 307, 353, 502
BstAPI GCANNNNNTGC 1 cut(s) 828
BstC8I GCNNGC 3 cut(s) 143, 662, 953
BstDEI CTNAG 8 cut(s) 220, 295, 394, 406, 412, 444, 916, 1307
BstF5I GGATG 4 cut(s) 601, 646, 893, 1329
BstH2I RGCGCY 2 cut(s) 36, 496
BstHHI GCGC 4 cut(s) 35, 495, 951, 1036
BstKTI GATC 3 cut(s) 90, 202, 682
BstMAI GTCTC 6 cut(s) 298, 380, 486, 830, 1088, 1190
BstMBI GATC 3 cut(s) 87, 199, 679
BstMWI GCNNNNNNNGC 3 cut(s) 828, 971, 1040
BstNI CCWGG 3 cut(s) 101, 244, 1157
BstNSI RCATGY 3 cut(s) 1040, 1142, 1241
BstSCI CCNGG 3 cut(s) 99, 242, 1155
BstSFI CTRYAG 5 cut(s) 820, 936, 1044, 1146, 1245
BstV1I GCAGC 8 cut(s) 705, 949, 1030, 1057, 1132, 1159, 1231, 1258
BstV2I GAAGAC 5 cut(s) 848, 948, 1056, 1158, 1257
BstZ17I GTATAC 1 cut(s) 461
BsuRI GGCC 1 cut(s) 104
BtrI CACGTC 1 cut(s) 946
BtsCI GGATG 4 cut(s) 601, 646, 893, 1329
BtsIMutI CAGTG 2 cut(s) 375, 528
Cac8I GCNNGC 3 cut(s) 143, 662, 953
CaiI CAGNNNCTG 4 cut(s) 377, 389, 828, 1172
CfoI GCGC 4 cut(s) 35, 495, 951, 1036
Cfr13I GGNCC 1 cut(s) 709
CseI GACGC 1 cut(s) 243
Csp6I GTAC 1 cut(s) 586
CviQI GTAC 1 cut(s) 586
DdeI CTNAG 8 cut(s) 220, 295, 394, 406, 412, 444, 916, 1307
DpnI GATC 3 cut(s) 89, 201, 681
DpnII GATC 3 cut(s) 87, 199, 679
EaeI YGGCCR 1 cut(s) 102
Eam1104I CTCTTC 3 cut(s) 307, 353, 502
EarI CTCTTC 3 cut(s) 307, 353, 502
Eco130I CCWWGG 2 cut(s) 488, 712
Eco31I GGTCTC 1 cut(s) 486
Eco32I GATATC 2 cut(s) 811, 868
Eco47I GGWCC 1 cut(s) 709
EcoRII CCWGG 3 cut(s) 99, 242, 1155
EcoRV GATATC 2 cut(s) 811, 868
EcoT14I CCWWGG 2 cut(s) 488, 712
EcoT22I ATGCAT 1 cut(s) 861
ErhI CCWWGG 2 cut(s) 488, 712
FalI AAGNNNNNCTT 4 cut(s) 310, 342, 481, 513
FblI GTMKAC 1 cut(s) 460
Fnu4HI GCNGC 8 cut(s) 694, 963, 1044, 1071, 1146, 1173, 1245, 1272
FokI GGATG 3 cut(s) 608, 653, 900
Fsp4HI GCNGC 8 cut(s) 694, 963, 1044, 1071, 1146, 1173, 1245, 1272
FspAI RTGCGCAY 1 cut(s) 1035
FspBI CTAG 5 cut(s) 501, 540, 956, 1064, 1265
FspI TGCGCA 2 cut(s) 950, 1035
GlaI GCGC 4 cut(s) 34, 494, 950, 1035
GluI GCNGC 8 cut(s) 694, 963, 1044, 1071, 1146, 1173, 1245, 1272
GsuI CTGGAG 2 cut(s) 226, 504
HaeII RGCGCY 2 cut(s) 36, 496
HaeIII GGCC 1 cut(s) 104
HapII CCGG 1 cut(s) 184
HgaI GACGC 1 cut(s) 243
HhaI GCGC 4 cut(s) 35, 495, 951, 1036
Hin6I GCGC 4 cut(s) 33, 493, 949, 1034
HinP1I GCGC 4 cut(s) 33, 493, 949, 1034
HinfI GANTC 9 cut(s) 187, 380, 392, 398, 404, 428, 434, 440, 1106
HpaII CCGG 1 cut(s) 184
HphI GGTGA 7 cut(s) 644, 919, 1088, 1190, 1205, 1289, 1301
Hpy166II GTNNAC 2 cut(s) 461, 910
Hpy188III TCNNGA 3 cut(s) 782, 806, 1110
Hpy8I GTNNAC 2 cut(s) 461, 910
Hpy99I CGWCG 2 cut(s) 26, 29
HpyAV CCTTC 9 cut(s) 163, 188, 204, 316, 357, 572, 1107, 1206, 1305
HpyCH4III ACNGT 1 cut(s) 283
HpyCH4IV ACGT 2 cut(s) 945, 1281
HpyF10VI GCNNNNNNNGC 3 cut(s) 828, 971, 1040
HpyF3I CTNAG 8 cut(s) 220, 295, 394, 406, 412, 444, 916, 1307
HpySE526I ACGT 2 cut(s) 945, 1281
HspAI GCGC 4 cut(s) 33, 493, 949, 1034
Kzo9I GATC 3 cut(s) 87, 199, 679
LguI GCTCTTC 1 cut(s) 502
LmnI GCTCC 9 cut(s) 12, 17, 150, 242, 265, 523, 1116, 1215, 1314
Lsp1109I GCAGC 8 cut(s) 705, 949, 1030, 1057, 1132, 1159, 1231, 1258
LweI GCATC 5 cut(s) 878, 949, 1057, 1159, 1258
MaeI CTAG 5 cut(s) 501, 540, 956, 1064, 1265
MaeII ACGT 2 cut(s) 945, 1281
MaeIII GTNAC 5 cut(s) 265, 650, 701, 815, 1277
MalI GATC 3 cut(s) 89, 201, 681
MbiI CCGCTC 1 cut(s) 15
MboI GATC 3 cut(s) 87, 199, 679
MhlI GDGCHC 3 cut(s) 1121, 1220, 1319
MlsI TGGCCA 1 cut(s) 104
MluCI AATT 2 cut(s) 472, 851
MluNI TGGCCA 1 cut(s) 104
MlyI GAGTC 6 cut(s) 196, 386, 398, 422, 428, 434
MmeI TCCRAC 1 cut(s) 84
Mox20I TGGCCA 1 cut(s) 104
Mph1103I ATGCAT 1 cut(s) 861
MscI TGGCCA 1 cut(s) 104
MseI TTAA 3 cut(s) 450, 765, 854
MslI CAYNNNNRTG 3 cut(s) 1022, 1266, 1322
Msp20I TGGCCA 1 cut(s) 104
MspI CCGG 1 cut(s) 184
MspR9I CCNGG 3 cut(s) 101, 244, 1157
Mva1269I GAATGC 1 cut(s) 114
MvaI CCWGG 3 cut(s) 101, 244, 1157
MwoI GCNNNNNNNGC 3 cut(s) 828, 971, 1040
NdeII GATC 3 cut(s) 87, 199, 679
NlaIV GGNNCC 4 cut(s) 19, 261, 344, 519
NmeAIII GCCGAG 1 cut(s) 61
NmuCI GTSAC 3 cut(s) 650, 701, 1277
NsbI TGCGCA 2 cut(s) 950, 1035
NsiI ATGCAT 1 cut(s) 861
NspI RCATGY 3 cut(s) 1040, 1142, 1241
PciSI GCTCTTC 1 cut(s) 502
PcsI WCGNNNNNNNCGW 1 cut(s) 33
PctI GAATGC 1 cut(s) 114
PfeI GAWTC 3 cut(s) 380, 398, 1106
PflFI GACNNNGTC 1 cut(s) 707
PkrI GCNGC 8 cut(s) 695, 964, 1045, 1072, 1147, 1174, 1246, 1273
PleI GAGTC 6 cut(s) 195, 386, 398, 422, 428, 434
PpsI GAGTC 6 cut(s) 195, 386, 398, 422, 428, 434
PshBI ATTAAT 1 cut(s) 854
Psp6I CCWGG 3 cut(s) 99, 242, 1155
PspGI CCWGG 3 cut(s) 99, 242, 1155
PspN4I GGNNCC 4 cut(s) 19, 261, 344, 519
PspPI GGNCC 1 cut(s) 709
PstI CTGCAG 4 cut(s) 824, 1048, 1150, 1249
PstNI CAGNNNCTG 4 cut(s) 377, 389, 828, 1172
PsyI GACNNNGTC 1 cut(s) 707
RsaI GTAC 1 cut(s) 587
RsaNI GTAC 1 cut(s) 586
RseI CAYNNNNRTG 3 cut(s) 1022, 1266, 1322
SapI GCTCTTC 1 cut(s) 502
SaqAI TTAA 3 cut(s) 450, 765, 854
SatI GCNGC 8 cut(s) 694, 963, 1044, 1071, 1146, 1173, 1245, 1272
Sau3AI GATC 3 cut(s) 87, 199, 679
Sau96I GGNCC 1 cut(s) 709
ScaI AGTACT 1 cut(s) 587
SchI GAGTC 6 cut(s) 196, 386, 398, 422, 428, 434
ScrFI CCNGG 3 cut(s) 101, 244, 1157
SduI GDGCHC 3 cut(s) 1121, 1220, 1319
SfaNI GCATC 5 cut(s) 878, 949, 1057, 1159, 1258
SfcI CTRYAG 5 cut(s) 820, 936, 1044, 1146, 1245
SinI GGWCC 1 cut(s) 709
SmiMI CAYNNNNRTG 3 cut(s) 1022, 1266, 1322
SmlI CTYRAG 1 cut(s) 832
SmoI CTYRAG 1 cut(s) 832
Sse9I AATT 2 cut(s) 472, 851
SsiI CCGC 1 cut(s) 15
SspMI CTAG 5 cut(s) 501, 540, 956, 1064, 1265
StyD4I CCNGG 3 cut(s) 99, 242, 1155
StyI CCWWGG 2 cut(s) 488, 712
TaaI ACNGT 1 cut(s) 283
TaiI ACGT 2 cut(s) 948, 1284
TaqI TCGA 2 cut(s) 129, 426
TasI AATT 2 cut(s) 472, 851
TatI WGTACW 1 cut(s) 585
TfiI GAWTC 3 cut(s) 380, 398, 1106
Tru1I TTAA 3 cut(s) 450, 765, 854
Tru9I TTAA 3 cut(s) 450, 765, 854
TscAI CASTG 2 cut(s) 382, 528
TseFI GTSAC 3 cut(s) 650, 701, 1277
TseI GCWGC 8 cut(s) 693, 962, 1043, 1070, 1145, 1172, 1244, 1271
Tsp45I GTSAC 3 cut(s) 650, 701, 1277
TspDTI ATGAA 3 cut(s) 657, 888, 1178
TspGWI ACGGA 1 cut(s) 42
TspRI CASTG 2 cut(s) 382, 528
Tth111I GACNNNGTC 1 cut(s) 707
VpaK11BI GGWCC 1 cut(s) 709
VspI ATTAAT 1 cut(s) 854
XapI RAATTY 1 cut(s) 472
XceI RCATGY 3 cut(s) 1040, 1142, 1241
XmiI GTMKAC 1 cut(s) 460
XspI CTAG 5 cut(s) 501, 540, 956, 1064, 1265
ZrmI AGTACT 1 cut(s) 587
Zsp2I ATGCAT 1 cut(s) 861
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.