Rh6DG487200

Cell division control protein 2

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0019526
Physical Location & Seq
Forward (+)
64870335 .. 64870658
324 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG487200.1

Sequence Viewer

Length: 324 bp
ATGCGCGTCCAGATGGACGAAGAAGGCATGCCTCCCACCGCCCTCCGCGAGGTCTCGCTCCTCCAGATGCTGTCCCAGTCGCTCTACGTGGTCCGCCTCCTCTGCGACGAACACGTGGACAACAAGAAGGACGGGAAACCGGTCCTCTACCTCGTCTTCAAGTACCTCGACACCGATCTGAGAAGTTTATCTATTCCGGTCACCGAAAAGGCCCGAATCCGAGAGCGCTGGTGCCGGCGATGGTCCAGAGCTTTCTGTTTCAGCTCGCCACTCCCACGGCGTGCTTCACCGCGATTTGAAGCCGCAGAATCTGCTTTTGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000082 GO:0000278 GO:0000307 GO:0000902 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006464 GO:0006468 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0007049 GO:0007154 GO:0007165 GO:0007275 GO:0007346 GO:0008150 GO:0008152 GO:0008284 GO:0009058 GO:0009059 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009826 GO:0009888 GO:0009889 GO:0009987 GO:0010016 GO:0010033 GO:0010103 GO:0010154 GO:0010374 GO:0010376 GO:0010389 GO:0010440 GO:0010444 GO:0010468 GO:0010556 GO:0010564 GO:0016043 GO:0016049 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019219 GO:0019222 GO:0019538 GO:0022402 GO:0022414 GO:0023052 GO:0030154 GO:0030332 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032875 GO:0032989 GO:0032991 GO:0034641 GO:0034645 GO:0036211 GO:0040007 GO:0042023 GO:0042127 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0044770 GO:0044772 GO:0044786 GO:0044843 GO:0046483 GO:0048316 GO:0048366 GO:0048367 GO:0048518 GO:0048522 GO:0048589 GO:0048608 GO:0048646 GO:0048731 GO:0048825 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051239 GO:0051716 GO:0051726 GO:0060255 GO:0060560 GO:0061458 GO:0061695 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0090329 GO:0090558 GO:0090626 GO:0090627 GO:0090698 GO:0097472 GO:0099402 GO:0140096 GO:1901360 GO:1901564 GO:1901576 GO:1901987 GO:1901990 GO:1902494 GO:1902554 GO:1902749 GO:1902806 GO:1902911 GO:1903047 GO:1990234 GO:2000026 GO:2000037 GO:2000112
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase

Protein Analysis

107

Amino Acids

12.49

Weight (kDa)

9.21

Isoelectric Point (pI)

72.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 231
AccII CGCG 3 cut(s) 6, 48, 292
AciI CCGC 5 cut(s) 39, 46, 94, 290, 303
AcvI CACGTG 1 cut(s) 115
AdeI CACNNNGTG 1 cut(s) 281
AfaI GTAC 1 cut(s) 164
AfeI AGCGCT 1 cut(s) 227
AfiI CCNNNNNNNGG 1 cut(s) 49
AflIII ACRYGT 1 cut(s) 112
AgeI ACCGGT 1 cut(s) 139
AgsI TTSAA 2 cut(s) 160, 299
AjuI GAANNNNNNNTTGG 1 cut(s) 300
AluBI AGCT 2 cut(s) 251, 264
AluI AGCT 2 cut(s) 251, 264
Alw26I GTCTC 1 cut(s) 58
AlwNI CAGNNNCTG 2 cut(s) 70, 311
Aor51HI AGCGCT 1 cut(s) 227
AoxI GGCC 1 cut(s) 210
AsiGI ACCGGT 1 cut(s) 139
AspLEI GCGC 2 cut(s) 6, 228
AspS9I GGNCC 4 cut(s) 91, 142, 211, 243
AsuHPI GGTGA 2 cut(s) 193, 279
AvaII GGWCC 3 cut(s) 91, 142, 243
BanI GGYRCC 1 cut(s) 231
BbrPI CACGTG 1 cut(s) 115
BbsI GAAGAC 1 cut(s) 148
BccI CCATC 2 cut(s) 7, 234
BceAI ACGGC 1 cut(s) 293
BcoDI GTCTC 1 cut(s) 58
BfoI RGCGCY 1 cut(s) 229
BisI GCNGC 1 cut(s) 303
BlsI GCNGC 1 cut(s) 304
Bme18I GGWCC 3 cut(s) 91, 142, 243
BmgT120I GGNCC 4 cut(s) 91, 142, 211, 243
BmiI GGNNCC 1 cut(s) 233
BmrI ACTGGG 1 cut(s) 70
BmsI GCATC 1 cut(s) 57
BmuI ACTGGG 1 cut(s) 70
BpiI GAAGAC 1 cut(s) 148
BpmI CTGGAG 1 cut(s) 47
BsaAI YACGTR 2 cut(s) 88, 115
BsaI GGTCTC 1 cut(s) 58
BsaJI CCNNGG 1 cut(s) 275
BsaWI WCCGGW 2 cut(s) 139, 196
Bsc4I CCNNNNNNNGG 1 cut(s) 49
Bse118I RCCGGY 2 cut(s) 139, 234
Bse1I ACTGG 1 cut(s) 76
BseDI CCNNGG 1 cut(s) 275
BseLI CCNNNNNNNGG 1 cut(s) 49
BseMII CTCAG 1 cut(s) 170
BseNI ACTGG 1 cut(s) 76
BseRI GAGGAG 2 cut(s) 50, 89
Bsh1236I CGCG 3 cut(s) 6, 48, 292
BshFI GGCC 1 cut(s) 212
BshNI GGYRCC 1 cut(s) 231
BshTI ACCGGT 1 cut(s) 139
BsiSI CCGG 3 cut(s) 140, 197, 235
BslFI GGGAC 1 cut(s) 58
BslI CCNNNNNNNGG 1 cut(s) 49
BsmAI GTCTC 1 cut(s) 58
BsmFI GGGAC 1 cut(s) 58
BsnI GGCC 1 cut(s) 212
Bso31I GGTCTC 1 cut(s) 58
Bsp143I GATC 1 cut(s) 175
BspACI CCGC 5 cut(s) 39, 46, 94, 290, 303
BspANI GGCC 1 cut(s) 212
BspCNI CTCAG 1 cut(s) 171
BspFNI CGCG 3 cut(s) 6, 48, 292
BspLI GGNNCC 1 cut(s) 233
BspT107I GGYRCC 1 cut(s) 231
BspTNI GGTCTC 1 cut(s) 58
BsrFI RCCGGY 2 cut(s) 139, 234
BsrI ACTGG 1 cut(s) 76
BssAI RCCGGY 2 cut(s) 139, 234
BssECI CCNNGG 1 cut(s) 275
BssMI GATC 1 cut(s) 175
BstAPI GCANNNNNTGC 1 cut(s) 311
BstBAI YACGTR 2 cut(s) 88, 115
BstC8I GCNNGC 4 cut(s) 29, 236, 266, 282
BstDEI CTNAG 1 cut(s) 179
BstDSI CCRYGG 1 cut(s) 275
BstEII GGTNACC 1 cut(s) 199
BstENI CCTNNNNNAGG 1 cut(s) 47
BstFNI CGCG 3 cut(s) 6, 48, 292
BstH2I RGCGCY 1 cut(s) 229
BstHHI GCGC 2 cut(s) 6, 228
BstKTI GATC 1 cut(s) 178
BstMAI GTCTC 1 cut(s) 58
BstMBI GATC 1 cut(s) 175
BstMWI GCNNNNNNNGC 2 cut(s) 102, 311
BstNSI RCATGY 1 cut(s) 31
BstPI GGTNACC 1 cut(s) 199
BstUI CGCG 3 cut(s) 6, 48, 292
BstV2I GAAGAC 1 cut(s) 148
BsuRI GGCC 1 cut(s) 212
BtgI CCRYGG 1 cut(s) 275
BtgZI GCGATG 1 cut(s) 253
Cac8I GCNNGC 4 cut(s) 29, 236, 266, 282
CaiI CAGNNNCTG 2 cut(s) 70, 311
CfoI GCGC 2 cut(s) 6, 228
Cfr10I RCCGGY 2 cut(s) 139, 234
Cfr13I GGNCC 4 cut(s) 91, 142, 211, 243
Csp6I GTAC 1 cut(s) 163
CspAI ACCGGT 1 cut(s) 139
CviAII CATG 1 cut(s) 28
CviJI RGCY 4 cut(s) 212, 251, 264, 302
CviKI_1 RGCY 4 cut(s) 212, 251, 264, 302
CviQI GTAC 1 cut(s) 163
DdeI CTNAG 1 cut(s) 179
DpnI GATC 1 cut(s) 177
DpnII GATC 1 cut(s) 175
DraIII CACNNNGTG 1 cut(s) 281
EciI GGCGGA 1 cut(s) 83
Eco31I GGTCTC 1 cut(s) 58
Eco47I GGWCC 3 cut(s) 91, 142, 243
Eco47III AGCGCT 1 cut(s) 227
Eco72I CACGTG 1 cut(s) 115
Eco91I GGTNACC 1 cut(s) 199
EcoNI CCTNNNNNAGG 1 cut(s) 47
EcoO65I GGTNACC 1 cut(s) 199
FaeI CATG 1 cut(s) 31
FaiI YATR 1 cut(s) 29
FaqI GGGAC 1 cut(s) 58
FatI CATG 1 cut(s) 27
Fnu4HI GCNGC 1 cut(s) 303
Fsp4HI GCNGC 1 cut(s) 303
GlaI GCGC 2 cut(s) 5, 227
GluI GCNGC 1 cut(s) 303
GsuI CTGGAG 1 cut(s) 47
HaeII RGCGCY 1 cut(s) 229
HaeIII GGCC 1 cut(s) 212
HapII CCGG 3 cut(s) 140, 197, 235
HhaI GCGC 2 cut(s) 6, 228
Hin1II CATG 1 cut(s) 31
Hin6I GCGC 2 cut(s) 4, 226
HinP1I GCGC 2 cut(s) 4, 226
HinfI GANTC 2 cut(s) 216, 308
HpaII CCGG 3 cut(s) 140, 197, 235
HphI GGTGA 2 cut(s) 193, 279
Hpy166II GTNNAC 1 cut(s) 118
Hpy188I TCNGA 2 cut(s) 180, 221
Hpy188III TCNNGA 3 cut(s) 10, 64, 246
Hpy8I GTNNAC 1 cut(s) 118
Hpy99I CGWCG 1 cut(s) 110
HpyAV CCTTC 2 cut(s) 17, 121
HpyCH4IV ACGT 2 cut(s) 87, 114
HpyF10VI GCNNNNNNNGC 2 cut(s) 102, 311
HpyF3I CTNAG 1 cut(s) 179
HpySE526I ACGT 2 cut(s) 87, 114
Hsp92II CATG 1 cut(s) 31
HspAI GCGC 2 cut(s) 4, 226
KroI GCCGGC 1 cut(s) 234
KroNI GCCGGC 1 cut(s) 236
Kzo9I GATC 1 cut(s) 175
LmnI GCTCC 1 cut(s) 63
LpnPI CCDG 8 cut(s) 23, 77, 89, 153, 210, 214, 248, 259
LweI GCATC 1 cut(s) 57
MaeII ACGT 2 cut(s) 87, 114
MaeIII GTNAC 1 cut(s) 199
MalI GATC 1 cut(s) 177
MboI GATC 1 cut(s) 175
MboII GAAGA 2 cut(s) 32, 148
MnlI CCTC 9 cut(s) 42, 43, 53, 71, 107, 110, 155, 161, 176
MroNI GCCGGC 1 cut(s) 234
MspI CCGG 3 cut(s) 140, 197, 235
MvnI CGCG 3 cut(s) 6, 48, 292
MwoI GCNNNNNNNGC 2 cut(s) 102, 311
NaeI GCCGGC 1 cut(s) 236
NdeII GATC 1 cut(s) 175
NgoMIV GCCGGC 1 cut(s) 234
NlaIII CATG 1 cut(s) 31
NlaIV GGNNCC 1 cut(s) 233
NmuCI GTSAC 1 cut(s) 199
NspI RCATGY 1 cut(s) 31
PaeI GCATGC 1 cut(s) 31
PdiI GCCGGC 1 cut(s) 236
PfeI GAWTC 2 cut(s) 216, 308
PinAI ACCGGT 1 cut(s) 139
PkrI GCNGC 1 cut(s) 304
PmaCI CACGTG 1 cut(s) 115
PmlI CACGTG 1 cut(s) 115
Ppu21I YACGTR 2 cut(s) 88, 115
PspCI CACGTG 1 cut(s) 115
PspEI GGTNACC 1 cut(s) 199
PspN4I GGNNCC 1 cut(s) 233
PspPI GGNCC 4 cut(s) 91, 142, 211, 243
PstNI CAGNNNCTG 2 cut(s) 70, 311
RsaI GTAC 1 cut(s) 164
RsaNI GTAC 1 cut(s) 163
SatI GCNGC 1 cut(s) 303
Sau3AI GATC 1 cut(s) 175
Sau96I GGNCC 4 cut(s) 91, 142, 211, 243
SetI ASST 7 cut(s) 54, 90, 117, 153, 168, 253, 266
SfaNI GCATC 1 cut(s) 57
SinI GGWCC 3 cut(s) 91, 142, 243
SphI GCATGC 1 cut(s) 31
SsiI CCGC 5 cut(s) 39, 46, 94, 290, 303
TaiI ACGT 2 cut(s) 90, 117
TaqI TCGA 1 cut(s) 168
TauI GCSGC 1 cut(s) 305
TfiI GAWTC 2 cut(s) 216, 308
TseFI GTSAC 1 cut(s) 199
Tsp45I GTSAC 1 cut(s) 199
VpaK11BI GGWCC 3 cut(s) 91, 142, 243
XagI CCTNNNNNAGG 1 cut(s) 47
XceI RCATGY 1 cut(s) 31
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.