Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0009089

Physical Location & Seq

Genomic Coordinates Forward (+)

66381565 .. 66387427

Gene Structure 5863 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG510300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1407 bp

ATGATGAATACTATTCTGACCAGAGCCTCTCTCTCGCCGGACCCGAAGCTCCTGTTCAGCTACACCACCAACTCCAATGTCGACCGCTTCGCCTTCAACTTCAAGCCTCACCTCCCGATACGCCGTCGTTTCCCTCATCGCCGTCATCTCCGGCAGCAGTCGAACCCTAATTTCACTCTCTCCAGCTGCCTGCAGGCCGCCGCGGCCCCAAATCATATCGCCACGGCGGCGGCGCCGATTCAGGGGGAGGCGTCGGTGCTGCTCGACGTCTCCGGGATGATGTGCGGCGGCTGTGTTTCGCGAGTCAAGTCGGTGCTGTCTGCGGACGACCGAGTCCACTCGGTGGCGGTCAACATGTTGACCGAGACGGCAGCGATTAAGCTGAGGCCGGAGGTTGAAGGTGGAGCGGAGGCCGTGGCGGAGAGCTTGGCCGGAAGGTTGACGGAGTGCGGATTCGCGGCGAGGAGGAGGGCTTCCGGGATGGGAGTGACGGAGAGTGTGAGGAAGTGGAAGGAGATGGTGAAGAAGAAGGAGGAGATGCTGGTGAAGAGTAGGAACCGAGTCATTTTGGCTTGGACTCTGGTGGCCTTGTGCTGTGGATCACACGCTTCCCACATTTTGCATTCTCTGGGAATTCACATTGCTCATGGATCGTATATGGATGTGCTCCATAATTCGTATGTGAAGGGTGGTTTGGCTATGGCAGCTTTGTTGGGACCCGGACGAGGAACCCTCACTGAAGGAAAACCTGCTGTTTCTAGCATTGCTTCTTTCAAGTATAAAGACTCAGAAATTCTTCAAATAGCTGCTGCTGTAGAGAGTACAGCATCACATCCAATTGCTGATGCTATCTTAAACAAAGCCAAATCATTGGAGTTGAGTATCCCAGTCACAAAAAGGCAATTAACAGAACCAGGTTTTGGAACATTAGCAGAAGTAGATGGCCTTTTGGTTGCAGTGGGTTCTTTGGAATGGGTTCATGAGCGTTTCCAGAGAAGAACAGATCGATCTGACATTTCAAACCTAGAGCATGCCGTGCATCAATCATCAGAAGGCATAACACCCTCAAATTATTCAAAAACAATTGTATACGTTGGACGTGAAGGGGAAGGTATCATCGGTGCTATTGCAATATCCGACAGCCTGCGGGAAGATGCTGAGTTTACTGTTGTAGATGCACTGGAACTTGCACAGGCAACAATGGGAAAAGTGTATCAAAATTTATCTTGGGCTGTTGCATACAACGTAATTGCCATCCCCATTGCTGCTGGAGTACTGCTTCCTCAATATGATTTTGCCATGACACCATCACTTTCTGGTGGGATGATGGCCTTGAGCTCGATATTTGTAGTAACCAACTCTTTGCTTCTACAGCTTCATAAGTCTGAAAGTGCTAGGAAGAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0003674 GO:0005215 GO:0005375 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006811 GO:0006812 GO:0006825 GO:0008150 GO:0008324 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0015075 GO:0015318 GO:0016020 GO:0022857 GO:0022890 GO:0030001 GO:0031976 GO:0031984 GO:0034220 GO:0034357 GO:0035434 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0046915 GO:0051179 GO:0051234 GO:0055035 GO:0055085 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

E1-E2_ATPase HMA Hydrolase

Protein Analysis

468

Amino Acids

50.44

Weight (kDa)

8.92

Isoelectric Point (pI)

41.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HMA	PF00403	88 - 132	1.3e-09	Heavy-metal-associated domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009089)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G21930 AT5G21930 AT5G21930 AT5G21930
fragaria_vesca	FvH4_2g30930 FvH4_2g30930 FvH4_2g30930
malus_domestica	MD15G1049400.v1.1
prunus_persica	Prupe.1G403700_v2.0.a1 Prupe.1G403700_v2.0.a1
pyrus_communis	pycom15g04820
rosa_chinensis	RchiOBHm_Chr6g0311921
rosa_multiflora	Rmu_ssc0000057.1_g000001
rosa_roxburghii	Rroxscaffold_7G00157220
rosa_rugosa	Rorug06G0391300 Rorug06G0391400 Rorug06G0391400
rosa_samantha	Rh6AG507800 Rh6BG519000 Rh6CG524700 Rh6DG510300
rosa_wichuraiana	Rw6G044200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	332
AatII	GACGTC	1 cut(s)	270
Acc36I	ACCTGC	1 cut(s)	757
AccB1I	GGYRCC	1 cut(s)	232
AccB7I	CCANNNNNTGG	2 cut(s)	343, 920
AccBSI	CCGCTC	1 cut(s)	407
AccI	GTMKAC	2 cut(s)	81, 1089
AccII	CGCG	3 cut(s)	203, 301, 458
AclWI	GGATC	2 cut(s)	607, 658
AcoI	YGGCCR	1 cut(s)	429
AcsI	RAATTY	3 cut(s)	633, 792, 1219
AcuI	CTGAAG	1 cut(s)	759
AcyI	GRCGYC	3 cut(s)	233, 251, 267
AdeI	CACNNNGTG	1 cut(s)	343
AfaI	GTAC	2 cut(s)	823, 1275
AfiI	CCNNNNNNNGG	4 cut(s)	242, 343, 725, 920
AflIII	ACRYGT	1 cut(s)	354
AgsI	TTSAA	7 cut(s)	97, 103, 398, 775, 800, 1020, 1077
AjiI	CACGTC	1 cut(s)	1100
AjnI	CCWGG	1 cut(s)	913
AjuI	GAANNNNNNNTTGG	4 cut(s)	677, 709, 903, 935
AluBI	AGCT	9 cut(s)	49, 60, 186, 382, 426, 707, 806, 1338, 1375
AluI	AGCT	9 cut(s)	49, 60, 186, 382, 426, 707, 806, 1338, 1375
Alw21I	GWGCWC	2 cut(s)	669, 1340
Alw26I	GTCTC	2 cut(s)	274, 359
AlwI	GGATC	2 cut(s)	607, 658
AoxI	GGCC	8 cut(s)	195, 204, 386, 411, 429, 585, 943, 1329
ApeKI	GCWGC	8 cut(s)	154, 186, 259, 371, 704, 806, 809, 1265
ApoI	RAATTY	3 cut(s)	633, 792, 1219
Asp700I	GAANNNNTTC	2 cut(s)	795, 975
AspLEI	GCGC	1 cut(s)	235
AspS9I	GGNCC	3 cut(s)	40, 205, 716
AsuC2I	CCSGG	3 cut(s)	274, 478, 720
AsuHPI	GGTGA	3 cut(s)	101, 532, 556
AvaII	GGWCC	2 cut(s)	40, 716
BanI	GGYRCC	1 cut(s)	232
BanII	GRGCYC	1 cut(s)	1340
Bbv12I	GWGCWC	2 cut(s)	669, 1340
BbvCI	CCTCAGC	1 cut(s)	383
BbvI	GCAGC	8 cut(s)	166, 173, 246, 383, 716, 793, 796, 1252
BccI	CCATC	6 cut(s)	475, 511, 935, 1262, 1315, 1321
BceAI	ACGGC	6 cut(s)	108, 126, 240, 384, 398, 1019
BciT130I	CCWGG	1 cut(s)	915
BciVI	GTATCC	1 cut(s)	893
BcnI	CCSGG	3 cut(s)	274, 478, 720
BcoDI	GTCTC	2 cut(s)	274, 359
BfaI	CTAG	3 cut(s)	759, 1025, 1395
BfmI	CTRYAG	3 cut(s)	191, 813, 1370
BfoI	RGCGCY	1 cut(s)	236
BfuAI	ACCTGC	1 cut(s)	757
BfuI	GTATCC	1 cut(s)	893
BglI	GCCNNNNNGGC	2 cut(s)	203, 227
BmcAI	AGTACT	1 cut(s)	1275
Bme1390I	CCNGG	4 cut(s)	274, 478, 720, 915
Bme18I	GGWCC	2 cut(s)	40, 716
BmgBI	CACGTC	1 cut(s)	1100
BmgT120I	GGNCC	3 cut(s)	40, 205, 716
BmiI	GGNNCC	7 cut(s)	42, 207, 234, 557, 717, 718, 730
BmrFI	CCNGG	4 cut(s)	274, 478, 720, 915
BmrI	ACTGGG	1 cut(s)	881
BmsI	GCATC	6 cut(s)	528, 835, 836, 1048, 1144, 1165
BmuI	ACTGGG	1 cut(s)	881
BplI	GAGNNNNNCTC	4 cut(s)	15, 47, 717, 749
BpmI	CTGGAG	2 cut(s)	166, 1290
Bpu10I	CCTNAGC	1 cut(s)	383
BpuEI	CTTGAG	1 cut(s)	1354
BpuMI	CCSGG	3 cut(s)	274, 478, 720
Bsa29I	ATCGAT	1 cut(s)	1006
BsaHI	GRCGYC	3 cut(s)	233, 251, 267
BsaJI	CCNNGG	3 cut(s)	201, 222, 414
Bsc4I	CCNNNNNNNGG	4 cut(s)	242, 343, 725, 920
Bse1I	ACTGG	2 cut(s)	887, 1185
Bse3DI	GCAATG	3 cut(s)	639, 762, 1260
BseBI	CCWGG	1 cut(s)	915
BseCI	ATCGAT	1 cut(s)	1006
BseDI	CCNNGG	3 cut(s)	201, 222, 414
BseGI	GGATG	6 cut(s)	282, 486, 667, 832, 1254, 1329
BseLI	CCNNNNNNNGG	4 cut(s)	242, 343, 725, 920
BseMI	GCAATG	3 cut(s)	639, 762, 1260
BseMII	CTCAG	3 cut(s)	374, 801, 1149
BseNI	ACTGG	2 cut(s)	887, 1185
BseRI	GAGGAG	3 cut(s)	478, 481, 548
BseXI	GCAGC	8 cut(s)	166, 173, 246, 383, 716, 793, 796, 1252
Bsh1236I	CGCG	3 cut(s)	203, 301, 458
Bsh1285I	CGRYCG	2 cut(s)	85, 331
BshFI	GGCC	8 cut(s)	197, 206, 388, 413, 431, 587, 945, 1331
BshNI	GGYRCC	1 cut(s)	232
BshVI	ATCGAT	1 cut(s)	1006
BsiEI	CGRYCG	2 cut(s)	85, 331
BsiHKAI	GWGCWC	2 cut(s)	669, 1340
BsiSI	CCGG	7 cut(s)	38, 151, 273, 389, 432, 477, 720
BslFI	GGGAC	1 cut(s)	729
BslI	CCNNNNNNNGG	4 cut(s)	242, 343, 725, 920
BsmAI	GTCTC	2 cut(s)	274, 359
BsmBI	CGTCTC	2 cut(s)	274, 359
BsmFI	GGGAC	1 cut(s)	729
BsmI	GAATGC	1 cut(s)	622
BsnI	GGCC	8 cut(s)	197, 206, 388, 413, 431, 587, 945, 1331
Bsp1286I	GDGCHC	2 cut(s)	669, 1340
Bsp143I	GATC	4 cut(s)	599, 650, 1003, 1007
Bsp68I	TCGCGA	1 cut(s)	301
BspANI	GGCC	8 cut(s)	197, 206, 388, 413, 431, 587, 945, 1331
BspCNI	CTCAG	3 cut(s)	375, 800, 1150
BspDI	ATCGAT	1 cut(s)	1006
BspFNI	CGCG	3 cut(s)	203, 301, 458
BspHI	TCATGA	1 cut(s)	979
BspLI	GGNNCC	7 cut(s)	42, 207, 234, 557, 717, 718, 730
BspMAI	CTGCAG	1 cut(s)	195
BspMI	ACCTGC	1 cut(s)	757
BspPI	GGATC	2 cut(s)	607, 658
BspT107I	GGYRCC	1 cut(s)	232
BsrBI	CCGCTC	1 cut(s)	407
BsrDI	GCAATG	3 cut(s)	639, 762, 1260
BsrI	ACTGG	2 cut(s)	887, 1185
BssECI	CCNNGG	3 cut(s)	201, 222, 414
BssMI	GATC	4 cut(s)	599, 650, 1003, 1007
BssNAI	GTATAC	1 cut(s)	1090
BssNI	GRCGYC	3 cut(s)	233, 251, 267
Bst1107I	GTATAC	1 cut(s)	1090
Bst2UI	CCWGG	1 cut(s)	915
Bst4CI	ACNGT	1 cut(s)	1168
Bst6I	CTCTTC	1 cut(s)	542
BstACI	GRCGYC	3 cut(s)	233, 251, 267
BstAPI	GCANNNNNTGC	1 cut(s)	1036
BstC8I	GCNNGC	4 cut(s)	191, 195, 1032, 1145
BstDEI	CTNAG	3 cut(s)	383, 787, 1158
BstDSI	CCRYGG	3 cut(s)	201, 222, 414
BstF5I	GGATG	6 cut(s)	282, 486, 667, 832, 1254, 1329
BstFNI	CGCG	3 cut(s)	203, 301, 458
BstH2I	RGCGCY	1 cut(s)	236
BstHHI	GCGC	1 cut(s)	235
BstKTI	GATC	4 cut(s)	602, 653, 1006, 1010
BstMAI	GTCTC	2 cut(s)	274, 359
BstMBI	GATC	4 cut(s)	599, 650, 1003, 1007
BstMCI	CGRYCG	2 cut(s)	85, 331
BstMWI	GCNNNNNNNGC	5 cut(s)	203, 227, 704, 1036, 1372
BstNI	CCWGG	1 cut(s)	915
BstNSI	RCATGY	2 cut(s)	358, 1034
BstSCI	CCNGG	4 cut(s)	272, 476, 718, 913
BstSFI	CTRYAG	3 cut(s)	191, 813, 1370
BstUI	CGCG	3 cut(s)	203, 301, 458
BstV1I	GCAGC	8 cut(s)	166, 173, 246, 383, 716, 793, 796, 1252
BstXI	CCANNNNNNTGG	1 cut(s)	871
BstZ17I	GTATAC	1 cut(s)	1090
Bsu15I	ATCGAT	1 cut(s)	1006
BsuI	GTATCC	1 cut(s)	893
BsuRI	GGCC	8 cut(s)	197, 206, 388, 413, 431, 587, 945, 1331
BsuTUI	ATCGAT	1 cut(s)	1006
BtgI	CCRYGG	3 cut(s)	201, 222, 414
BtgZI	GCGATG	1 cut(s)	122
BtrI	CACGTC	1 cut(s)	1100
BtsCI	GGATG	6 cut(s)	282, 486, 667, 832, 1254, 1329
BtsI	GCAGTG	1 cut(s)	963
BtsIMutI	CAGTG	3 cut(s)	735, 963, 1178
BtuMI	TCGCGA	1 cut(s)	301
BveI	ACCTGC	1 cut(s)	757
Cac8I	GCNNGC	4 cut(s)	191, 195, 1032, 1145
CciI	TCATGA	1 cut(s)	979
CfoI	GCGC	1 cut(s)	235
Cfr13I	GGNCC	3 cut(s)	40, 205, 716
Cfr42I	CCGCGG	1 cut(s)	204
ClaI	ATCGAT	1 cut(s)	1006
CseI	GACGC	1 cut(s)	240
CsiI	ACCWGGT	1 cut(s)	913
Csp6I	GTAC	2 cut(s)	822, 1274
CviAII	CATG	5 cut(s)	355, 647, 980, 1031, 1300
CviQI	GTAC	2 cut(s)	822, 1274
DdeI	CTNAG	3 cut(s)	383, 787, 1158
DinI	GGCGCC	1 cut(s)	234
DpnI	GATC	4 cut(s)	601, 652, 1005, 1009
DpnII	GATC	4 cut(s)	599, 650, 1003, 1007
DraIII	CACNNNGTG	1 cut(s)	343
DrdI	GACNNNNNNGTC	1 cut(s)	332
DseDI	GACNNNNNNGTC	1 cut(s)	332
EaeI	YGGCCR	1 cut(s)	429
Eam1104I	CTCTTC	1 cut(s)	542
EarI	CTCTTC	1 cut(s)	542
EciI	GGCGGA	1 cut(s)	434
Ecl136II	GAGCTC	1 cut(s)	1338
Eco24I	GRGCYC	1 cut(s)	1340
Eco47I	GGWCC	2 cut(s)	40, 716
Eco53kI	GAGCTC	1 cut(s)	1338
Eco57I	CTGAAG	1 cut(s)	759
EcoICRI	GAGCTC	1 cut(s)	1338
EcoO109I	RGGNCCY	1 cut(s)	716
EcoRI	GAATTC	1 cut(s)	633
EcoRII	CCWGG	1 cut(s)	913
EcoT38I	GRGCYC	1 cut(s)	1340
EgeI	GGCGCC	1 cut(s)	234
EheI	GGCGCC	1 cut(s)	234
Esp3I	CGTCTC	2 cut(s)	274, 359
FaeI	CATG	5 cut(s)	358, 650, 983, 1034, 1303
FaqI	GGGAC	1 cut(s)	729
FatI	CATG	5 cut(s)	354, 646, 979, 1030, 1299
FauI	CCCGC	1 cut(s)	1140
FblI	GTMKAC	2 cut(s)	81, 1089
FokI	GGATG	6 cut(s)	289, 493, 674, 819, 1241, 1336
FriOI	GRGCYC	1 cut(s)	1340
FspBI	CTAG	3 cut(s)	759, 1025, 1395
GlaI	GCGC	1 cut(s)	234
GsuI	CTGGAG	2 cut(s)	166, 1290
HaeII	RGCGCY	1 cut(s)	236
HaeIII	GGCC	8 cut(s)	197, 206, 388, 413, 431, 587, 945, 1331
HapII	CCGG	7 cut(s)	38, 151, 273, 389, 432, 477, 720
HgaI	GACGC	1 cut(s)	240
HhaI	GCGC	1 cut(s)	235
Hin1I	GRCGYC	3 cut(s)	233, 251, 267
Hin1II	CATG	5 cut(s)	358, 650, 983, 1034, 1303
Hin6I	GCGC	1 cut(s)	233
HinP1I	GCGC	1 cut(s)	233
HincII	GTYRAC	4 cut(s)	82, 352, 360, 441
HindII	GTYRAC	4 cut(s)	82, 352, 360, 441
HinfI	GANTC	7 cut(s)	238, 303, 333, 453, 561, 577, 785
HpaII	CCGG	7 cut(s)	38, 151, 273, 389, 432, 477, 720
HphI	GGTGA	3 cut(s)	101, 532, 556
Hpy166II	GTNNAC	7 cut(s)	82, 337, 352, 360, 441, 1090, 1164
Hpy188I	TCNGA	6 cut(s)	18, 790, 1012, 1051, 1138, 1387
Hpy188III	TCNNGA	4 cut(s)	115, 300, 980, 991
Hpy8I	GTNNAC	7 cut(s)	82, 337, 352, 360, 441, 1090, 1164
Hpy99I	CGWCG	3 cut(s)	129, 256, 269
HpyCH4III	ACNGT	1 cut(s)	1168
HpyCH4IV	ACGT	4 cut(s)	267, 1092, 1099, 1245
HpyCH4V	TGCA	8 cut(s)	193, 622, 956, 1039, 1130, 1178, 1190, 1238
HpyF10VI	GCNNNNNNNGC	5 cut(s)	203, 227, 704, 1036, 1372
HpyF3I	CTNAG	3 cut(s)	383, 787, 1158
HpySE526I	ACGT	4 cut(s)	267, 1092, 1099, 1245
Hsp92I	GRCGYC	3 cut(s)	233, 251, 267
Hsp92II	CATG	5 cut(s)	358, 650, 983, 1034, 1303
HspAI	GCGC	1 cut(s)	233
KasI	GGCGCC	1 cut(s)	232
KflI	GGGWCCC	1 cut(s)	716
KspI	CCGCGG	1 cut(s)	204
Kzo9I	GATC	4 cut(s)	599, 650, 1003, 1007
LmnI	GCTCC	3 cut(s)	54, 404, 672
Lsp1109I	GCAGC	8 cut(s)	166, 173, 246, 383, 716, 793, 796, 1252
LweI	GCATC	6 cut(s)	528, 835, 836, 1048, 1144, 1165
MabI	ACCWGGT	1 cut(s)	913
MaeI	CTAG	3 cut(s)	759, 1025, 1395
MaeII	ACGT	4 cut(s)	267, 1092, 1099, 1245
MaeIII	GTNAC	3 cut(s)	487, 889, 1351
MalI	GATC	4 cut(s)	601, 652, 1005, 1009
MbiI	CCGCTC	1 cut(s)	407
MboI	GATC	4 cut(s)	599, 650, 1003, 1007
MboII	GAAGA	6 cut(s)	535, 538, 559, 788, 1008, 1163
MfeI	CAATTG	2 cut(s)	837, 1083
MhlI	GDGCHC	2 cut(s)	669, 1340
Mly113I	GGCGCC	1 cut(s)	233
MlyI	GAGTC	5 cut(s)	312, 342, 570, 571, 779
MmeI	TCCRAC	2 cut(s)	1075, 1161
MroXI	GAANNNNTTC	2 cut(s)	795, 975
MseI	TTAA	3 cut(s)	378, 854, 905
MspA1I	CMGCKG	2 cut(s)	186, 203
MspI	CCGG	7 cut(s)	38, 151, 273, 389, 432, 477, 720
MspR9I	CCNGG	4 cut(s)	274, 478, 720, 915
MunI	CAATTG	2 cut(s)	837, 1083
Mva1269I	GAATGC	1 cut(s)	622
MvaI	CCWGG	1 cut(s)	915
MvnI	CGCG	3 cut(s)	203, 301, 458
MwoI	GCNNNNNNNGC	5 cut(s)	203, 227, 704, 1036, 1372
NarI	GGCGCC	1 cut(s)	233
NciI	CCSGG	3 cut(s)	274, 478, 720
NdeII	GATC	4 cut(s)	599, 650, 1003, 1007
NlaIII	CATG	5 cut(s)	358, 650, 983, 1034, 1303
NlaIV	GGNNCC	7 cut(s)	42, 207, 234, 557, 717, 718, 730
NmuCI	GTSAC	2 cut(s)	487, 889
NruI	TCGCGA	1 cut(s)	301
NspI	RCATGY	2 cut(s)	358, 1034
PaeI	GCATGC	1 cut(s)	1034
PagI	TCATGA	1 cut(s)	979
PciI	ACATGT	1 cut(s)	354
PcsI	WCGNNNNNNNCGW	1 cut(s)	41
PctI	GAATGC	1 cut(s)	622
PdmI	GAANNNNTTC	2 cut(s)	795, 975
PfeI	GAWTC	2 cut(s)	238, 453
PflFI	GACNNNGTC	1 cut(s)	332
PflMI	CCANNNNNTGG	2 cut(s)	343, 920
PfoI	TCCNGGA	2 cut(s)	272, 476
PleI	GAGTC	5 cut(s)	311, 341, 569, 571, 779
PluTI	GGCGCC	1 cut(s)	236
PpsI	GAGTC	5 cut(s)	311, 341, 569, 571, 779
PpuMI	RGGWCCY	1 cut(s)	716
PscI	ACATGT	1 cut(s)	354
Psp124BI	GAGCTC	1 cut(s)	1340
Psp5II	RGGWCCY	1 cut(s)	716
Psp6I	CCWGG	1 cut(s)	913
PspGI	CCWGG	1 cut(s)	913
PspN4I	GGNNCC	7 cut(s)	42, 207, 234, 557, 717, 718, 730
PspPI	GGNCC	3 cut(s)	40, 205, 716
PspPPI	RGGWCCY	1 cut(s)	716
PstI	CTGCAG	1 cut(s)	195
PsyI	GACNNNGTC	1 cut(s)	332
PvuII	CAGCTG	1 cut(s)	186
RruI	TCGCGA	1 cut(s)	301
RsaI	GTAC	2 cut(s)	823, 1275
RsaNI	GTAC	2 cut(s)	822, 1274
SacI	GAGCTC	1 cut(s)	1340
SacII	CCGCGG	1 cut(s)	204
SalI	GTCGAC	1 cut(s)	80
SaqAI	TTAA	3 cut(s)	378, 854, 905
Sau3AI	GATC	4 cut(s)	599, 650, 1003, 1007
Sau96I	GGNCC	3 cut(s)	40, 205, 716
SbfI	CCTGCAGG	1 cut(s)	195
ScaI	AGTACT	1 cut(s)	1275
SchI	GAGTC	5 cut(s)	312, 342, 570, 571, 779
ScrFI	CCNGG	4 cut(s)	274, 478, 720, 915
SdaI	CCTGCAGG	1 cut(s)	195
SduI	GDGCHC	2 cut(s)	669, 1340
SexAI	ACCWGGT	1 cut(s)	913
SfaNI	GCATC	6 cut(s)	528, 835, 836, 1048, 1144, 1165
SfcI	CTRYAG	3 cut(s)	191, 813, 1370
SfiI	GGCCNNNNNGGCC	1 cut(s)	203
SfoI	GGCGCC	1 cut(s)	234
Sfr303I	CCGCGG	1 cut(s)	204
SgrBI	CCGCGG	1 cut(s)	204
SinI	GGWCC	2 cut(s)	40, 716
SmlI	CTYRAG	1 cut(s)	1333
SmoI	CTYRAG	1 cut(s)	1333
SphI	GCATGC	1 cut(s)	1034
Sse8387I	CCTGCAGG	1 cut(s)	195
SspDI	GGCGCC	1 cut(s)	232
SspMI	CTAG	3 cut(s)	759, 1025, 1395
SstI	GAGCTC	1 cut(s)	1340
StyD4I	CCNGG	4 cut(s)	272, 476, 718, 913
TaaI	ACNGT	1 cut(s)	1168
TaiI	ACGT	4 cut(s)	270, 1095, 1102, 1248
TaqI	TCGA	5 cut(s)	81, 161, 264, 1006, 1340
TaqII	GACCGA	2 cut(s)	345, 377
TatI	WGTACW	2 cut(s)	821, 1273
TauI	GCSGC	8 cut(s)	200, 203, 206, 230, 233, 288, 291, 461
TfiI	GAWTC	2 cut(s)	238, 453
Tru1I	TTAA	3 cut(s)	378, 854, 905
Tru9I	TTAA	3 cut(s)	378, 854, 905
TscAI	CASTG	3 cut(s)	742, 963, 1185
TseFI	GTSAC	2 cut(s)	487, 889
TseI	GCWGC	8 cut(s)	154, 186, 259, 371, 704, 806, 809, 1265
Tsp45I	GTSAC	2 cut(s)	487, 889
TspDTI	ATGAA	3 cut(s)	20, 968, 1367
TspGWI	ACGGA	2 cut(s)	458, 506
TspRI	CASTG	3 cut(s)	742, 963, 1185
Tth111I	GACNNNGTC	1 cut(s)	332
Van91I	CCANNNNNTGG	2 cut(s)	343, 920
VpaK11BI	GGWCC	2 cut(s)	40, 716
XapI	RAATTY	3 cut(s)	633, 792, 1219
XceI	RCATGY	2 cut(s)	358, 1034
XmiI	GTMKAC	2 cut(s)	81, 1089
XmnI	GAANNNNTTC	2 cut(s)	795, 975
XspI	CTAG	3 cut(s)	759, 1025, 1395
ZraI	GACGTC	1 cut(s)	268
ZrmI	AGTACT	1 cut(s)	1275

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.