Rh7AG232000

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
22395665 .. 22397107
1443 bp
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UTR
Exon/CDS
Intron
Rh7AG232000.1

Sequence Viewer

Length: 162 bp
ATGTTTTCAGACAATTGGTTGCGATATAAGGTATGGCTTCATGTTTGGAAGAGAATCTGCTCGCAAAGAGCTGGGAAGACCTTCGCCGCCAGAATCCCAATTCCTGACTTCGTTGGGTTGATGGCATCAGGTGGGCAGTGTGGAAATCCCTTCATTTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

53

Amino Acids

6.07

Weight (kDa)

9.75

Isoelectric Point (pI)

22.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 87
AluBI AGCT 1 cut(s) 71
AluI AGCT 1 cut(s) 71
Asp700I GAANNNNTTC 1 cut(s) 80
BbsI GAAGAC 1 cut(s) 83
BccI CCATC 1 cut(s) 115
BisI GCNGC 1 cut(s) 87
BlsI GCNGC 1 cut(s) 88
BmsI GCATC 1 cut(s) 134
BpiI GAAGAC 1 cut(s) 83
BseYI CCCAGC 1 cut(s) 71
BspACI CCGC 1 cut(s) 87
Bst6I CTCTTC 1 cut(s) 44
BstC8I GCNNGC 1 cut(s) 62
BstV2I GAAGAC 1 cut(s) 83
BtsI GCAGTG 1 cut(s) 143
BtsIMutI CAGTG 1 cut(s) 143
Cac8I GCNNGC 1 cut(s) 62
CviAII CATG 1 cut(s) 41
CviJI RGCY 2 cut(s) 37, 71
CviKI_1 RGCY 2 cut(s) 37, 71
Eam1104I CTCTTC 1 cut(s) 44
EarI CTCTTC 1 cut(s) 44
FaeI CATG 1 cut(s) 44
FaiI YATR 3 cut(s) 27, 34, 42
FatI CATG 1 cut(s) 40
Fnu4HI GCNGC 1 cut(s) 87
Fsp4HI GCNGC 1 cut(s) 87
GluI GCNGC 1 cut(s) 87
GsaI CCCAGC 1 cut(s) 75
Hin1II CATG 1 cut(s) 44
HinfI GANTC 2 cut(s) 54, 93
Hpy188I TCNGA 1 cut(s) 10
Hpy188III TCNNGA 1 cut(s) 104
HpyAV CCTTC 2 cut(s) 91, 160
Hsp92II CATG 1 cut(s) 44
LpnPI CCDG 4 cut(s) 57, 103, 114, 117
LweI GCATC 1 cut(s) 134
MboII GAAGA 2 cut(s) 61, 88
MfeI CAATTG 1 cut(s) 13
MluCI AATT 2 cut(s) 13, 99
MroXI GAANNNNTTC 1 cut(s) 80
MseI TTAA 1 cut(s) 160
MunI CAATTG 1 cut(s) 13
NlaIII CATG 1 cut(s) 44
PdmI GAANNNNTTC 1 cut(s) 80
PfeI GAWTC 2 cut(s) 54, 93
PkrI GCNGC 1 cut(s) 88
PspFI CCCAGC 1 cut(s) 71
SaqAI TTAA 1 cut(s) 160
SatI GCNGC 1 cut(s) 87
SetI ASST 4 cut(s) 33, 73, 83, 133
SfaNI GCATC 1 cut(s) 134
SgeI CNNG 6 cut(s) 53, 73, 84, 102, 116, 141
Sse9I AATT 2 cut(s) 13, 99
SsiI CCGC 1 cut(s) 87
TasI AATT 2 cut(s) 13, 99
TauI GCSGC 1 cut(s) 89
TfiI GAWTC 2 cut(s) 54, 93
Tru1I TTAA 1 cut(s) 160
Tru9I TTAA 1 cut(s) 160
TscAI CASTG 1 cut(s) 143
TspDTI ATGAA 2 cut(s) 29, 142
TspRI CASTG 1 cut(s) 143
XmnI GAANNNNTTC 1 cut(s) 80
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.