Rh7CG245500
ERF Family

Belongs to the protein kinase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0012697
Physical Location & Seq
Forward (+)
22962459 .. 22964497
2039 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG245500.1

Sequence Viewer

Length: 390 bp
ATGGTTAGAGCTAGAATCACAACGGGCCTTCGAAATTCAAATATACCCGCAAGGCATGCATGCATCTTTCCCTTCAAATTCAAATCCAAGAAGAAACGAAAGGAGTCAAAATCAGCTCCGGATTTGAGAAACAAAAGCGACTCCTTAACTCCGGTATTAGACCTTGCCTCGAAATCTCTACCTTCACCAAGAAGCATACCAGAATTGTACAAAGAGAAGGAGCAGAATTTGAAGGTTTTCTCACTCCAAGAGCTCAGGGATTCAACCAATGGCTTCAGCAGGTTGCAAAAGCTTGGGAAAGGGGGATTTGGGAGTGTGTATAAAGGAATAATCAAGCCCAAAAATGGCAAGGAAACACTATTCAATTCTTCCTGTATACTGCTTCAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr

Protein Analysis

129

Amino Acids

14.48

Weight (kDa)

10.36

Isoelectric Point (pI)

55.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 270
AccI GTMKAC 1 cut(s) 376
AccIII TCCGGA 1 cut(s) 118
AciI CCGC 1 cut(s) 48
AcsI RAATTY 3 cut(s) 34, 77, 226
AcuI CTGAAG 1 cut(s) 259
AfaI GTAC 1 cut(s) 209
AfiI CCNNNNNNNGG 1 cut(s) 344
AgsI TTSAA 7 cut(s) 39, 76, 82, 232, 264, 364, 386
AluBI AGCT 4 cut(s) 11, 116, 253, 292
AluI AGCT 4 cut(s) 11, 116, 253, 292
Alw21I GWGCWC 1 cut(s) 255
Aor13HI TCCGGA 1 cut(s) 118
AoxI GGCC 1 cut(s) 25
ApoI RAATTY 3 cut(s) 34, 77, 226
Asp700I GAANNNNTTC 1 cut(s) 236
AspS9I GGNCC 1 cut(s) 25
AsuHPI GGTGA 1 cut(s) 177
AsuII TTCGAA 1 cut(s) 31
BanII GRGCYC 1 cut(s) 255
Bbv12I GWGCWC 1 cut(s) 255
BfaI CTAG 1 cut(s) 12
BfuAI ACCTGC 1 cut(s) 270
BmgT120I GGNCC 1 cut(s) 25
BmsI GCATC 1 cut(s) 72
Bpu10I CCTNAGC 1 cut(s) 254
Bpu14I TTCGAA 1 cut(s) 31
BsaWI WCCGGW 2 cut(s) 118, 151
Bsc4I CCNNNNNNNGG 1 cut(s) 344
BseAI TCCGGA 1 cut(s) 118
BseLI CCNNNNNNNGG 1 cut(s) 344
BseMII CTCAG 1 cut(s) 268
BshFI GGCC 1 cut(s) 27
BsiHKAI GWGCWC 1 cut(s) 255
BsiSI CCGG 2 cut(s) 119, 152
BslI CCNNNNNNNGG 1 cut(s) 344
BsnI GGCC 1 cut(s) 27
Bsp119I TTCGAA 1 cut(s) 31
Bsp1286I GDGCHC 1 cut(s) 255
Bsp13I TCCGGA 1 cut(s) 118
Bsp1407I TGTACA 1 cut(s) 207
BspACI CCGC 1 cut(s) 48
BspANI GGCC 1 cut(s) 27
BspCNI CTCAG 1 cut(s) 267
BspEI TCCGGA 1 cut(s) 118
BspMI ACCTGC 1 cut(s) 270
BspT104I TTCGAA 1 cut(s) 31
BsrGI TGTACA 1 cut(s) 207
BssNAI GTATAC 1 cut(s) 377
Bst1107I GTATAC 1 cut(s) 377
BstAPI GCANNNNNTGC 1 cut(s) 56
BstAUI TGTACA 1 cut(s) 207
BstBI TTCGAA 1 cut(s) 31
BstC8I GCNNGC 2 cut(s) 57, 61
BstDEI CTNAG 1 cut(s) 254
BstMWI GCNNNNNNNGC 1 cut(s) 56
BstNSI RCATGY 2 cut(s) 59, 63
BstZ17I GTATAC 1 cut(s) 377
BsuRI GGCC 1 cut(s) 27
BveI ACCTGC 1 cut(s) 270
Cac8I GCNNGC 2 cut(s) 57, 61
Cfr13I GGNCC 1 cut(s) 25
Csp6I GTAC 1 cut(s) 208
CviAII CATG 2 cut(s) 56, 60
CviJI RGCY 7 cut(s) 11, 27, 116, 253, 273, 292, 337
CviKI_1 RGCY 7 cut(s) 11, 27, 116, 253, 273, 292, 337
CviQI GTAC 1 cut(s) 208
DdeI CTNAG 1 cut(s) 254
Ecl136II GAGCTC 1 cut(s) 253
Eco24I GRGCYC 1 cut(s) 255
Eco53kI GAGCTC 1 cut(s) 253
Eco57I CTGAAG 1 cut(s) 259
EcoICRI GAGCTC 1 cut(s) 253
EcoT22I ATGCAT 2 cut(s) 61, 65
EcoT38I GRGCYC 1 cut(s) 255
FaeI CATG 2 cut(s) 59, 63
FaiI YATR 6 cut(s) 44, 57, 61, 197, 321, 377
FatI CATG 2 cut(s) 55, 59
FauI CCCGC 1 cut(s) 55
FblI GTMKAC 1 cut(s) 376
FriOI GRGCYC 1 cut(s) 255
FspBI CTAG 1 cut(s) 12
HaeIII GGCC 1 cut(s) 27
HapII CCGG 2 cut(s) 119, 152
Hin1II CATG 2 cut(s) 59, 63
HindIII AAGCTT 1 cut(s) 290
HinfI GANTC 4 cut(s) 15, 104, 140, 260
HpaII CCGG 2 cut(s) 119, 152
HphI GGTGA 1 cut(s) 177
Hpy166II GTNNAC 1 cut(s) 377
Hpy188III TCNNGA 1 cut(s) 119
Hpy8I GTNNAC 1 cut(s) 377
HpyAV CCTTC 5 cut(s) 38, 82, 192, 211, 226
HpyCH4V TGCA 3 cut(s) 59, 63, 286
HpyF10VI GCNNNNNNNGC 1 cut(s) 56
HpyF3I CTNAG 1 cut(s) 254
Hsp92II CATG 2 cut(s) 59, 63
Kpn2I TCCGGA 1 cut(s) 118
LmnI GCTCC 2 cut(s) 121, 220
LpnPI CCDG 6 cut(s) 132, 165, 213, 241, 265, 385
LweI GCATC 1 cut(s) 72
MaeI CTAG 1 cut(s) 12
MboII GAAGA 2 cut(s) 103, 360
MhlI GDGCHC 1 cut(s) 255
MluCI AATT 5 cut(s) 34, 77, 203, 226, 364
MlyI GAGTC 2 cut(s) 113, 134
MnlI CCTC 1 cut(s) 178
Mph1103I ATGCAT 2 cut(s) 61, 65
MroI TCCGGA 1 cut(s) 118
MroXI GAANNNNTTC 1 cut(s) 236
MseI TTAA 1 cut(s) 146
MspI CCGG 2 cut(s) 119, 152
MwoI GCNNNNNNNGC 1 cut(s) 56
NlaIII CATG 2 cut(s) 59, 63
NsiI ATGCAT 2 cut(s) 61, 65
NspI RCATGY 2 cut(s) 59, 63
NspV TTCGAA 1 cut(s) 31
PaeI GCATGC 2 cut(s) 59, 63
PdmI GAANNNNTTC 1 cut(s) 236
PfeI GAWTC 2 cut(s) 15, 260
PleI GAGTC 2 cut(s) 112, 134
PpsI GAGTC 2 cut(s) 112, 134
Psp124BI GAGCTC 1 cut(s) 255
PspPI GGNCC 1 cut(s) 25
RsaI GTAC 1 cut(s) 209
RsaNI GTAC 1 cut(s) 208
SacI GAGCTC 1 cut(s) 255
SaqAI TTAA 1 cut(s) 146
Sau96I GGNCC 1 cut(s) 25
SchI GAGTC 2 cut(s) 113, 134
SduI GDGCHC 1 cut(s) 255
SetI ASST 8 cut(s) 13, 118, 165, 184, 237, 255, 284, 294
SfaNI GCATC 1 cut(s) 72
SfuI TTCGAA 1 cut(s) 31
SphI GCATGC 2 cut(s) 59, 63
Sse9I AATT 5 cut(s) 34, 77, 203, 226, 364
SsiI CCGC 1 cut(s) 48
SspMI CTAG 1 cut(s) 12
SstI GAGCTC 1 cut(s) 255
TaqI TCGA 2 cut(s) 31, 170
TasI AATT 5 cut(s) 34, 77, 203, 226, 364
TatI WGTACW 1 cut(s) 207
TfiI GAWTC 2 cut(s) 15, 260
Tru1I TTAA 1 cut(s) 146
Tru9I TTAA 1 cut(s) 146
XapI RAATTY 3 cut(s) 34, 77, 226
XceI RCATGY 2 cut(s) 59, 63
XmiI GTMKAC 1 cut(s) 376
XmnI GAANNNNTTC 1 cut(s) 236
XspI CTAG 1 cut(s) 12
Zsp2I ATGCAT 2 cut(s) 61, 65
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.