Rh7BG372900
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0015871
Physical Location & Seq
Forward (+)
40104918 .. 40109408
4491 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG372900.1

Sequence Viewer

Length: 3438 bp
ATGAAACCCATTATGCCTGCGCTTCTTCTTCTTCTCTTTCTTCTGGTGCTTCGCGGCGCACCCTTCTTCTCCTGCGCCGCCCAGCGCAGCCCCGAAAGCCTAGCCGAGATCGACGCCCTCACCACCTTCAGGCTCGACCTCCAGGATCCGATTGGCGCATTGAACGGCTGGGATTCCTCCACGCCTTCCGCTCCCTGCGACTGGCGCGGCGTCTTTTGCGACAGTAGCAGTCGGGTCTCCGAGCTCCGCTTGCCTCGCCTCCAACTCGGCGGCCGACTCAGTGACTCGCTCGCGAAGCTCACCATGCTGGGGAAGCTCAGCCTCCGGTCGAACTCCTTCAACGGGAGTATTCCCGACTCGCTTTCCCAATGCACGCGCCTACGCGCCGTCTTCCTGCAGAACAACTCTCTCTCCGGGAAGCTGCCGCCGGAGATCGGGAACCTGACTGGGCTGCAGATTCTCAATGTCGCCGGTAACCGCCTCTCCGGCGAAATCTCCGGCGAGCTCCCGCCGAGCCTCGTGTACCTCGATCTCTCCTCGAACGATTTCTCCGGCGAGATTCCGAGGAGCATCGCGAACCTGACTCAGCTTCAGCTCATCAACCTGTCGTACAACCAGTTTTCCGGTCAGGTTCCGGCGAGCTTGGGCCAGCTCCAGCAGCTGCAGTTCCTCTGGCTGGACCACAACCTGCTGGAAGGGACTCTGCCGTCGGCGATAGCCAATTGCGCGGCGCTGGTGCATTTCAGCGTCGAAGGGAATGCGCTCGGCGGCGTGATTCCGGCGGCTGTCGGAGCTCTGCCGAAGCTTCAGGTGTTGTCGCTTTCACAGAATAATTTCTCTGGTATGGTCCCATCCTCGTTGTTTTGCAATGCCTCATTCAATACGGCGTCGCTTAGGATTGTCCAGCTAGGGTTTAATTCGTTCACGGATATTGTTAAGCCTGAGAGGGCCACATGTTTTAGTGCTCTGGTGGTTTTGGATCTTCAGCACAATCAGATTGGCGGCGATTTTCCCTGGTGGATAATAACACAGGTACCAAACTTGACAGTGTTGGATGTTTCTAGTAACTCATTCTCCGGCGTGGTGCCGCCGGGGATTGGAAACCTCTCGAGGTTACAGGAGCTTAAGATGGCTAATAATTCATTTAGCGGTCCGATTCCGCAAGAGATTAAGCAATGCAGCTCACTAAGCGTGCTTGATCTCCAAGGAAATCGATTTTCGGGGGAAATTCCTGTGTTTTTGGGGGATTTGACAGGTTTGAAGGTGCTGTCTCTAGGGGAAAATCAGTTCTCGGGTTCCATTCCTCCGAGTTTTGGTAATCTTACGAGGCTGGAGACTTTGGGCTTGGGAGGGAACAACTTGACCGGAACTATGCCTGAGGAGTTGTTAATAGGGTTGGGTAATTTGACCACATTGGACCTCAGTGGGAACAGGTTTTTTGGTGAAGTTGCCATCAGCATTGGGAGTTTGAGTCAGTTAATGGTGCTGAATCTAAGTGGCAATGGCTTTTCTGGGAGGGTGCCGACTAGCTTGGGTAGTCTTTTCAGGCTTACTACTATTGATCTGAGCAAACAAAACTTCTCTGGTGAGGTGCCTTCTGAGTTTTTGGGGTTACCCAATTTACAAGTCATTGCATTGCAAGAGAACAGGTTATCTGGAGACGTTCCTGAAGGTTTTAGTAGCTTGATGGGTCTGCATTATTTGAATCTCAGTTCAAATGCATTTTCTGGTCACATTCCGGAGAATTATGGTTTTCTTCGGTCATTGGTTGTTCTTTCATTGTCCAACAATCACATTTCAGGACCAATTCCACCAGAGCTTGGAAACTGCTCTGACCTTCAAGTTCTAGAGCTGCAAATGAATTCCTTGACTGGCACCATTCCAGCCGCTCTCTCTCGCCTATCAGTGTTAAAGGATCTTGATTTGGGTAGCAACAACTTAACAGGTAGAATCCCAGAGGAAATGTCTAAATGCTCATCATTAACTGCTTTGTTGTTGAACTTCAATCATCTCTCAGGTGGTATACCAGACTCATTGTCTAAGCTATTGAACCTAACTACACTGGATCTCTCCAATAACAATTTGAGCGGGCAAATTCCTGGTGATCTTACATCTATTCCTGGCCTAGTGAACTTCAATGTCTCAATGAATAACCTCGACGGTGAGATTCCAGTGACGCTTGGTTCTCGGTTCAACAATGCATCAGACTTTTCAGGGAATCAAAACCTATGTGGGCCGCCATTGGAAAAGAAGTGCAAGGATCTAGACAAGAAAGATAGAAATAAGAGATTAATTCTTTTGATTGTGATTGTTGTTAGTGGAGCTTGCCTATTAGCTTTGTGCTGCTGCTTCTACATTTTCAGCCTCTTGAGATGGCGCAAAAAGCTCAAACAGGGATCATCTGGAGAGAAGACTAGAAGCAGTGCGAGGGCAAGCTCAGGAACTAGTGAGGGCCGTGGAAGCTCTGATAATGGAGTGCCAAAGCTTGTCATGTTCAACAGCAAAATCACACTTACAGAGACAATTGCAGCCACAAGGCAATTCGACGAAGAAAATGTGCTGAGCAGATCATCATATGGCTTGGTTTTCAAGGCTTGTTATGAGGATGGCATGGTGATGTCCATCCGTCGCCTCCCCGATGCAACACTCGATGAAAACATGTTCCGAAAAGAAGCAGAATCACTAGGCAGAGTCAAGCACCGGAATTTAACAGTTCTTCGAGGCTACTATGCCGGTCCACCTGACCTCAGGCTTCTAATCTATGACTACATGCCCAACGGTAACCTAGCCACCCTTCTGCAAGAAGCATCACACCAAGACGGCCATGTCCTCAATTGGCCAATGCGTCATCTCATTGCACTTGGAATTGCTCGTGGCTTGGCTTTTCTACACACATCTTCACTGGTACACGGCGACGTGAAGCCACAAAGCGTGCTATTCGATGCAGATTTCGAAGCCCATTTGTCTGATTTCGGCCTAGACAAACTCACATCAGCAACCAGCACTACTACCCCAACCGAAGCCTCAACCTCAACCACGGTCGGGACATTAGGCTACGTCTCTCACGAAGCAACACTAACAGGCAGAGTCACAAAGGAATCCGATGTTTACAGCTACGGGATCGTCTTGCTCGAGCTCTTAACAGGAAAGAGGCCGGTGATGTTCACCGAAGACGAAGACATAGTGAAGTGGGTGAAGAAGCAGCTTCAAAGAGGCCAAGTCACGGAGCTACTAGAGCCAGGGCTGCTTGAGCTTGACCCCGAGTCATCCGAGTGGGAAGAGTTTTTGCTTGGCGTGAAAGTCGGTTTGCTTTGCACGGCACCCGACCCGCTGGACCGGCCCACCATGTCCGACATTGTTTTCATGCTCGAAGGCTGCCGGGTCGGACCCGATCTCCCCTCCTCCGCCGACCCGACAACGCAACCGTCCCCGGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0007275 GO:0008150 GO:0009791 GO:0016020 GO:0032501 GO:0032502 GO:0044464 GO:0048731 GO:0048856 GO:0071944 GO:0090696 GO:0099402
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

1145

Amino Acids

123.43

Weight (kDa)

5.3

Isoelectric Point (pI)

41.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 36 - 74 1.4e-08 Leucine rich repeat N-terminal domain
LRR_8 PF13855 171 - 231 7.8e-07 Leucine rich repeat
LRR_14 PF23598 173 - 353 5.7e-09 Leucine-rich repeat region
LRR_8 PF13855 346 - 406 8.3e-08 Leucine rich repeat
LRR_14 PF23598 366 - 472 1.1e-07 Leucine-rich repeat region
LRR_8 PF13855 516 - 574 2.8e-08 Leucine rich repeat
LRR_8 PF13855 539 - 599 2.7e-07 Leucine rich repeat
LRR_14 PF23598 541 - 715 3e-09 Leucine-rich repeat region
LRR_8 PF13855 613 - 671 2.4e-08 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 852 - 1070 8.9e-30 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 854 - 1119 4.5e-30 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015871)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G36180
fragaria_vesca FvH4_5g31360
prunus_persica Prupe.7G166100_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0226621
rosa_laevigata RLG00000001713
rosa_multiflora Rmu_co8455755.1_g000001 Rmu_sc0002043.1_g000006 Rmu_sc0004294.1_g000002
rosa_roxburghii Rroxscaffold_3G00232650
rosa_rugosa Rorug07G0238700
rosa_samantha Rh7AG386200 Rh7BG372900 Rh7CG405500 Rh7DG384900
rosa_wichuraiana Rw7G032420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 706, 2825
Acc36I ACCTGC 1 cut(s) 696
Acc65I GGTACC 1 cut(s) 1033
AccB1I GGYRCC 6 cut(s) 1033, 1084, 1519, 1591, 1874, 3319
AccB7I CCANNNNNTGG 1 cut(s) 1820
AccBSI CCGCTC 3 cut(s) 191, 1889, 2088
AccI GTMKAC 1 cut(s) 2023
AccII CGCG 7 cut(s) 54, 207, 293, 376, 384, 575, 728
AccIII TCCGGA 1 cut(s) 1738
AclWI GGATC 8 cut(s) 140, 153, 987, 1923, 2073, 2268, 2404, 3128
AcoI YGGCCR 3 cut(s) 271, 2821, 2837
AcsI RAATTY 4 cut(s) 1227, 1861, 2094, 2704
AcuI CTGAAG 5 cut(s) 112, 575, 791, 968, 1689
AcyI GRCGYC 3 cut(s) 114, 210, 887
AfaI GTAC 4 cut(s) 524, 611, 1035, 2907
AflII CTTAAG 1 cut(s) 1124
AflIII ACRYGT 2 cut(s) 953, 2658
AhdI GACNNNNNGTC 2 cut(s) 2035, 3262
AhlI ACTAGT 1 cut(s) 2444
AjiI CACGTC 1 cut(s) 2917
AjnI CCWGG 5 cut(s) 141, 1013, 2098, 2119, 3238
AloI GAACNNNNNNTCC 4 cut(s) 533, 565, 1271, 1303
Alw21I GWGCWC 5 cut(s) 246, 507, 796, 967, 3138
Alw26I GTCTC 7 cut(s) 241, 1275, 1328, 1653, 2146, 2513, 3064
AlwI GGATC 8 cut(s) 140, 153, 987, 1923, 2073, 2268, 2404, 3128
AlwNI CAGNNNCTG 1 cut(s) 661
Ama87I CYCGRG 4 cut(s) 1108, 1291, 3131, 3260
Aor13HI TCCGGA 1 cut(s) 1738
ApoI RAATTY 4 cut(s) 1227, 1861, 2094, 2704
AseI ATTAAT 1 cut(s) 2291
Asp700I GAANNNNTTC 3 cut(s) 335, 545, 833
Asp718I GGTACC 1 cut(s) 1033
AsuC2I CCSGG 4 cut(s) 415, 1092, 3380, 3431
AsuII TTCGAA 1 cut(s) 2952
AvaI CYCGRG 4 cut(s) 1108, 1291, 3131, 3260
AvaII GGWCC 8 cut(s) 679, 847, 1151, 1417, 1802, 2735, 3334, 3386
AxyI CCTNAGG 2 cut(s) 1377, 2747
BaeI ACNNNNGTAYC 2 cut(s) 1017, 1050
BalI TGGCCA 1 cut(s) 2839
BamHI GGATCC 1 cut(s) 145
BanI GGYRCC 6 cut(s) 1033, 1084, 1519, 1591, 1874, 3319
BanII GRGCYC 4 cut(s) 246, 507, 796, 3138
BauI CACGAG 2 cut(s) 518, 2871
BbsI GAAGAC 4 cut(s) 382, 2417, 3177, 3183
Bbv12I GWGCWC 5 cut(s) 246, 507, 796, 967, 3138
BccI CCATC 7 cut(s) 859, 1123, 1460, 1681, 2367, 2600, 2630
BceAI ACGGC 8 cut(s) 181, 371, 691, 900, 2439, 2836, 2926, 3333
BcgI CGANNNNNNTGC 2 cut(s) 740, 774
BciT130I CCWGG 5 cut(s) 143, 1015, 2100, 2121, 3240
BcnI CCSGG 4 cut(s) 415, 1092, 3380, 3431
BcoDI GTCTC 7 cut(s) 241, 1275, 1328, 1653, 2146, 2513, 3064
BcuI ACTAGT 1 cut(s) 2444
BfmI CTRYAG 3 cut(s) 395, 452, 662
BfoI RGCGCY 1 cut(s) 734
BfrI CTTAAG 1 cut(s) 1124
BfuAI ACCTGC 1 cut(s) 696
BglI GCCNNNNNGGC 1 cut(s) 486
BlpI GCTNAGC 2 cut(s) 317, 2561
Bme1390I CCNGG 9 cut(s) 143, 415, 1015, 1092, 2100, 2121, 3240, 3380, 3431
Bme18I GGWCC 8 cut(s) 679, 847, 1151, 1417, 1802, 2735, 3334, 3386
BmeRI GACNNNNNGTC 2 cut(s) 2035, 3262
BmeT110I CYCGRG 4 cut(s) 1108, 1291, 3131, 3260
BmgBI CACGTC 1 cut(s) 2917
BmrFI CCNGG 9 cut(s) 143, 415, 1015, 1092, 2100, 2121, 3240, 3380, 3431
BmrI ACTGGG 1 cut(s) 456
BmsI GCATC 5 cut(s) 579, 2210, 2629, 2816, 2932
BmuI ACTGGG 1 cut(s) 456
BpiI GAAGAC 4 cut(s) 382, 2417, 3177, 3183
BpmI CTGGAG 5 cut(s) 125, 638, 1352, 1677, 2424
Bpu10I CCTNAGC 2 cut(s) 893, 2437
Bpu1102I GCTNAGC 2 cut(s) 317, 2561
Bpu14I TTCGAA 1 cut(s) 2952
BpuEI CTTGAG 2 cut(s) 2389, 3269
BpuMI CCSGG 4 cut(s) 415, 1092, 3380, 3431
Bsa29I ATCGAT 1 cut(s) 1213
BsaBI GATNNNNATC 1 cut(s) 2621
BsaHI GRCGYC 3 cut(s) 114, 210, 887
BsaI GGTCTC 1 cut(s) 241
BsaJI CCNNGG 8 cut(s) 563, 1013, 1091, 1204, 2455, 3036, 3239, 3429
BsaWI WCCGGW 5 cut(s) 324, 623, 1364, 1738, 2700
Bse118I RCCGGY 4 cut(s) 470, 2732, 3154, 3336
Bse1I ACTGG 7 cut(s) 206, 451, 616, 1876, 2067, 2171, 2907
Bse21I CCTNAGG 2 cut(s) 1377, 2747
Bse3DI GCAATG 6 cut(s) 874, 1181, 1507, 1629, 1634, 2853
Bse8I GATNNNNATC 1 cut(s) 2621
BseAI TCCGGA 1 cut(s) 1738
BseBI CCWGG 5 cut(s) 143, 1015, 2100, 2121, 3240
BseCI ATCGAT 1 cut(s) 1213
BseDI CCNNGG 8 cut(s) 563, 1013, 1091, 1204, 2455, 3036, 3239, 3429
BseGI GGATG 5 cut(s) 851, 1060, 2611, 2622, 3266
BseJI GATNNNNATC 1 cut(s) 2621
BseMI GCAATG 6 cut(s) 874, 1181, 1507, 1629, 1634, 2853
BseNI ACTGG 7 cut(s) 206, 451, 616, 1876, 2067, 2171, 2907
BseRI GAGGAG 4 cut(s) 526, 580, 1394, 3391
BseX3I CGGCCG 1 cut(s) 271
BseYI CCCAGC 3 cut(s) 81, 168, 307
Bsh1236I CGCG 7 cut(s) 54, 207, 293, 376, 384, 575, 728
Bsh1285I CGRYCG 3 cut(s) 274, 329, 3042
BshNI GGYRCC 6 cut(s) 1033, 1084, 1519, 1591, 1874, 3319
BshVI ATCGAT 1 cut(s) 1213
BsiEI CGRYCG 3 cut(s) 274, 329, 3042
BsiHKAI GWGCWC 5 cut(s) 246, 507, 796, 967, 3138
BsiHKCI CYCGRG 4 cut(s) 1108, 1291, 3131, 3260
BslFI GGGAC 4 cut(s) 712, 833, 3058, 3412
BsmAI GTCTC 7 cut(s) 241, 1275, 1328, 1653, 2146, 2513, 3064
BsmBI CGTCTC 2 cut(s) 1653, 3064
BsmFI GGGAC 4 cut(s) 712, 833, 3058, 3412
BsmI GAATGC 1 cut(s) 763
Bso31I GGTCTC 1 cut(s) 241
BsoBI CYCGRG 4 cut(s) 1108, 1291, 3131, 3260
Bsp119I TTCGAA 1 cut(s) 2952
Bsp1286I GDGCHC 5 cut(s) 246, 507, 796, 967, 3138
Bsp13I TCCGGA 1 cut(s) 1738
Bsp1720I GCTNAGC 2 cut(s) 317, 2561
Bsp68I TCGCGA 2 cut(s) 293, 575
BspDI ATCGAT 1 cut(s) 1213
BspEI TCCGGA 1 cut(s) 1738
BspFNI CGCG 7 cut(s) 54, 207, 293, 376, 384, 575, 728
BspMAI CTGCAG 3 cut(s) 399, 456, 666
BspMI ACCTGC 1 cut(s) 696
BspPI GGATC 8 cut(s) 140, 153, 987, 1923, 2073, 2268, 2404, 3128
BspT104I TTCGAA 1 cut(s) 2952
BspT107I GGYRCC 6 cut(s) 1033, 1084, 1519, 1591, 1874, 3319
BspTI CTTAAG 1 cut(s) 1124
BspTNI GGTCTC 1 cut(s) 241
BsrBI CCGCTC 3 cut(s) 191, 1889, 2088
BsrDI GCAATG 6 cut(s) 874, 1181, 1507, 1629, 1634, 2853
BsrFI RCCGGY 4 cut(s) 470, 2732, 3154, 3336
BsrI ACTGG 7 cut(s) 206, 451, 616, 1876, 2067, 2171, 2907
BssAI RCCGGY 4 cut(s) 470, 2732, 3154, 3336
BssECI CCNNGG 8 cut(s) 563, 1013, 1091, 1204, 2455, 3036, 3239, 3429
BssNAI GTATAC 1 cut(s) 2024
BssNI GRCGYC 3 cut(s) 114, 210, 887
BssSI CACGAG 2 cut(s) 518, 2871
BssT1I CCWWGG 1 cut(s) 1204
Bst1107I GTATAC 1 cut(s) 2024
Bst2BI CACGAG 2 cut(s) 518, 2871
Bst2UI CCWGG 5 cut(s) 143, 1015, 2100, 2121, 3240
Bst4CI ACNGT 7 cut(s) 224, 1048, 2162, 2713, 2780, 3040, 3426
Bst6I CTCTTC 1 cut(s) 3273
BstACI GRCGYC 3 cut(s) 114, 210, 887
BstAFI CTTAAG 1 cut(s) 1124
BstBI TTCGAA 1 cut(s) 2952
BstDSI CCRYGG 2 cut(s) 2455, 3036
BstEII GGTNACC 3 cut(s) 473, 1611, 2780
BstF5I GGATG 5 cut(s) 851, 1060, 2611, 2622, 3266
BstFNI CGCG 7 cut(s) 54, 207, 293, 376, 384, 575, 728
BstH2I RGCGCY 1 cut(s) 734
BstMAI GTCTC 7 cut(s) 241, 1275, 1328, 1653, 2146, 2513, 3064
BstMCI CGRYCG 3 cut(s) 274, 329, 3042
BstNI CCWGG 5 cut(s) 143, 1015, 2100, 2121, 3240
BstNSI RCATGY 3 cut(s) 957, 2662, 2773
BstPI GGTNACC 3 cut(s) 473, 1611, 2780
BstSCI CCNGG 9 cut(s) 141, 413, 1013, 1090, 2098, 2119, 3238, 3378, 3429
BstSFI CTRYAG 3 cut(s) 395, 452, 662
BstUI CGCG 7 cut(s) 54, 207, 293, 376, 384, 575, 728
BstV2I GAAGAC 4 cut(s) 382, 2417, 3177, 3183
BstX2I RGATCY 5 cut(s) 145, 979, 1915, 2065, 2260
BstYI RGATCY 5 cut(s) 145, 979, 1915, 2065, 2260
BstZ17I GTATAC 1 cut(s) 2024
BstZI CGGCCG 1 cut(s) 271
Bsu15I ATCGAT 1 cut(s) 1213
Bsu36I CCTNAGG 2 cut(s) 1377, 2747
BsuTUI ATCGAT 1 cut(s) 1213
BtgI CCRYGG 2 cut(s) 2455, 3036
BtgZI GCGATG 1 cut(s) 556
BtrI CACGTC 1 cut(s) 2917
BtsCI GGATG 5 cut(s) 851, 1060, 2611, 2622, 3266
BtsI GCAGTG 1 cut(s) 2428
BtsIMutI CAGTG 8 cut(s) 286, 1053, 1429, 1911, 2060, 2178, 2428, 2900
BtuMI TCGCGA 2 cut(s) 293, 575
BveI ACCTGC 1 cut(s) 696
CaiI CAGNNNCTG 1 cut(s) 661
Cfr10I RCCGGY 4 cut(s) 470, 2732, 3154, 3336
ClaI ATCGAT 1 cut(s) 1213
CpoI CGGWCCG 1 cut(s) 1151
CseI GACGC 6 cut(s) 122, 199, 736, 876, 2185, 2834
Csp6I GTAC 4 cut(s) 523, 610, 1034, 2906
CspI CGGWCCG 1 cut(s) 1151
CviQI GTAC 4 cut(s) 523, 610, 1034, 2906
DrdI GACNNNNNNGTC 2 cut(s) 706, 2825
DriI GACNNNNNGTC 2 cut(s) 2035, 3262
DseDI GACNNNNNNGTC 2 cut(s) 706, 2825
EaeI YGGCCR 3 cut(s) 271, 2821, 2837
EagI CGGCCG 1 cut(s) 271
Eam1104I CTCTTC 1 cut(s) 3273
Eam1105I GACNNNNNGTC 2 cut(s) 2035, 3262
EarI CTCTTC 1 cut(s) 3273
EciI GGCGGA 1 cut(s) 3394
Ecl136II GAGCTC 4 cut(s) 244, 505, 794, 3136
EclXI CGGCCG 1 cut(s) 271
Eco130I CCWWGG 1 cut(s) 1204
Eco24I GRGCYC 4 cut(s) 246, 507, 796, 3138
Eco31I GGTCTC 1 cut(s) 241
Eco47I GGWCC 8 cut(s) 679, 847, 1151, 1417, 1802, 2735, 3334, 3386
Eco52I CGGCCG 1 cut(s) 271
Eco53kI GAGCTC 4 cut(s) 244, 505, 794, 3136
Eco57I CTGAAG 5 cut(s) 112, 575, 791, 968, 1689
Eco81I CCTNAGG 2 cut(s) 1377, 2747
Eco88I CYCGRG 4 cut(s) 1108, 1291, 3131, 3260
Eco91I GGTNACC 3 cut(s) 473, 1611, 2780
EcoICRI GAGCTC 4 cut(s) 244, 505, 794, 3136
EcoO65I GGTNACC 3 cut(s) 473, 1611, 2780
EcoRI GAATTC 1 cut(s) 1861
EcoRII CCWGG 5 cut(s) 141, 1013, 2098, 2119, 3238
EcoT14I CCWWGG 1 cut(s) 1204
EcoT22I ATGCAT 2 cut(s) 1723, 2203
EcoT38I GRGCYC 4 cut(s) 246, 507, 796, 3138
ErhI CCWWGG 1 cut(s) 1204
Esp3I CGTCTC 2 cut(s) 1653, 3064
FaqI GGGAC 4 cut(s) 712, 833, 3058, 3412
FauI CCCGC 3 cut(s) 516, 2081, 3336
FauNDI CATATG 1 cut(s) 2575
FblI GTMKAC 1 cut(s) 2023
FokI GGATG 5 cut(s) 838, 1067, 2609, 2618, 3253
FriOI GRGCYC 4 cut(s) 246, 507, 796, 3138
GsaI CCCAGC 3 cut(s) 85, 172, 311
GsuI CTGGAG 5 cut(s) 125, 638, 1352, 1677, 2424
HaeII RGCGCY 1 cut(s) 734
HgaI GACGC 6 cut(s) 122, 199, 736, 876, 2185, 2834
Hin1I GRCGYC 3 cut(s) 114, 210, 887
HindIII AAGCTT 2 cut(s) 803, 2483
Hpy166II GTNNAC 8 cut(s) 523, 924, 2024, 2131, 2738, 2908, 3109, 3165
Hpy8I GTNNAC 8 cut(s) 523, 924, 2024, 2131, 2738, 2908, 3109, 3165
Hpy99I CGWCG 8 cut(s) 116, 712, 752, 892, 2162, 2549, 2631, 2918
HpyCH4III ACNGT 7 cut(s) 224, 1048, 2162, 2713, 2780, 3040, 3426
HpyCH4IV ACGT 3 cut(s) 1662, 2916, 3057
HpySE526I ACGT 3 cut(s) 1662, 2916, 3057
Hsp92I GRCGYC 3 cut(s) 114, 210, 887
Kpn2I TCCGGA 1 cut(s) 1738
KpnI GGTACC 1 cut(s) 1037
LmnI GCTCC 9 cut(s) 196, 249, 510, 567, 657, 791, 1120, 2321, 3226
LweI GCATC 5 cut(s) 579, 2210, 2629, 2816, 2932
MaeII ACGT 3 cut(s) 1662, 2916, 3057
MbiI CCGCTC 3 cut(s) 191, 1889, 2088
MfeI CAATTG 3 cut(s) 721, 2523, 2833
MflI RGATCY 5 cut(s) 145, 979, 1915, 2065, 2260
MhlI GDGCHC 5 cut(s) 246, 507, 796, 967, 3138
MlsI TGGCCA 1 cut(s) 2839
MluNI TGGCCA 1 cut(s) 2839
MmeI TCCRAC 6 cut(s) 286, 769, 1032, 1809, 3364, 3375
Mox20I TGGCCA 1 cut(s) 2839
Mph1103I ATGCAT 2 cut(s) 1723, 2203
MroI TCCGGA 1 cut(s) 1738
MroXI GAANNNNTTC 3 cut(s) 335, 545, 833
MscI TGGCCA 1 cut(s) 2839
MslI CAYNNNNRTG 2 cut(s) 2615, 3271
Msp20I TGGCCA 1 cut(s) 2839
MspA1I CMGCKG 2 cut(s) 661, 3331
MspCI CTTAAG 1 cut(s) 1124
MspR9I CCNGG 9 cut(s) 143, 415, 1015, 1092, 2100, 2121, 3240, 3380, 3431
MteI GCGCNGCGC 1 cut(s) 729
MunI CAATTG 3 cut(s) 721, 2523, 2833
Mva1269I GAATGC 1 cut(s) 763
MvaI CCWGG 5 cut(s) 143, 1015, 2100, 2121, 3240
MvnI CGCG 7 cut(s) 54, 207, 293, 376, 384, 575, 728
NciI CCSGG 4 cut(s) 415, 1092, 3380, 3431
NdeI CATATG 1 cut(s) 2575
NmeAIII GCCGAG 4 cut(s) 130, 246, 537, 744
NmuCI GTSAC 5 cut(s) 281, 1730, 2173, 3088, 3220
NruI TCGCGA 2 cut(s) 293, 575
NsiI ATGCAT 2 cut(s) 1723, 2203
NspI RCATGY 3 cut(s) 957, 2662, 2773
NspV TTCGAA 1 cut(s) 2952
PaeR7I CTCGAG 2 cut(s) 1108, 3131
PciI ACATGT 2 cut(s) 953, 2658
PcsI WCGNNNNNNNCGW 3 cut(s) 525, 3063, 3129
PctI GAATGC 1 cut(s) 763
PdmI GAANNNNTTC 3 cut(s) 335, 545, 833
PflMI CCANNNNNTGG 1 cut(s) 1820
PfoI TCCNGGA 2 cut(s) 141, 413
PscI ACATGT 2 cut(s) 953, 2658
PshBI ATTAAT 1 cut(s) 2291
Psp124BI GAGCTC 4 cut(s) 246, 507, 796, 3138
Psp6I CCWGG 5 cut(s) 141, 1013, 2098, 2119, 3238
PspEI GGTNACC 3 cut(s) 473, 1611, 2780
PspFI CCCAGC 3 cut(s) 81, 168, 307
PspGI CCWGG 5 cut(s) 141, 1013, 2098, 2119, 3238
PspXI VCTCGAGB 1 cut(s) 3131
PstI CTGCAG 3 cut(s) 399, 456, 666
PstNI CAGNNNCTG 1 cut(s) 661
PsuI RGATCY 5 cut(s) 145, 979, 1915, 2065, 2260
PvuII CAGCTG 1 cut(s) 661
RruI TCGCGA 2 cut(s) 293, 575
RsaI GTAC 4 cut(s) 524, 611, 1035, 2907
RsaNI GTAC 4 cut(s) 523, 610, 1034, 2906
RseI CAYNNNNRTG 2 cut(s) 2615, 3271
Rsr2I CGGWCCG 1 cut(s) 1151
RsrII CGGWCCG 1 cut(s) 1151
SacI GAGCTC 4 cut(s) 246, 507, 796, 3138
ScrFI CCNGG 9 cut(s) 143, 415, 1015, 1092, 2100, 2121, 3240, 3380, 3431
SduI GDGCHC 5 cut(s) 246, 507, 796, 967, 3138
SfaNI GCATC 5 cut(s) 579, 2210, 2629, 2816, 2932
SfcI CTRYAG 3 cut(s) 395, 452, 662
Sfr274I CTCGAG 2 cut(s) 1108, 3131
SfuI TTCGAA 1 cut(s) 2952
SinI GGWCC 8 cut(s) 679, 847, 1151, 1417, 1802, 2735, 3334, 3386
SlaI CTCGAG 2 cut(s) 1108, 3131
SmiMI CAYNNNNRTG 2 cut(s) 2615, 3271
SmlI CTYRAG 5 cut(s) 1108, 1124, 2368, 3131, 3248
SmoI CTYRAG 5 cut(s) 1108, 1124, 2368, 3131, 3248
SpeI ACTAGT 1 cut(s) 2444
SstI GAGCTC 4 cut(s) 246, 507, 796, 3138
StyD4I CCNGG 9 cut(s) 141, 413, 1013, 1090, 2098, 2119, 3238, 3378, 3429
StyI CCWWGG 1 cut(s) 1204
TaaI ACNGT 7 cut(s) 224, 1048, 2162, 2713, 2780, 3040, 3426
TaiI ACGT 3 cut(s) 1665, 2919, 3060
TaqII GACCGA 1 cut(s) 1749
TscAI CASTG 8 cut(s) 286, 1053, 1429, 1911, 2067, 2178, 2428, 2907
TseFI GTSAC 5 cut(s) 281, 1730, 2173, 3088, 3220
Tsp45I GTSAC 5 cut(s) 281, 1730, 2173, 3088, 3220
TspDTI ATGAA 7 cut(s) 17, 1131, 1767, 1874, 2162, 2667, 3352
TspGWI ACGGA 3 cut(s) 941, 2615, 3239
TspRI CASTG 8 cut(s) 286, 1053, 1429, 1911, 2067, 2178, 2428, 2907
Van91I CCANNNNNTGG 1 cut(s) 1820
Vha464I CTTAAG 1 cut(s) 1124
VpaK11BI GGWCC 8 cut(s) 679, 847, 1151, 1417, 1802, 2735, 3334, 3386
VspI ATTAAT 1 cut(s) 2291
XapI RAATTY 4 cut(s) 1227, 1861, 2094, 2704
XbaI TCTAGA 2 cut(s) 1846, 2263
XceI RCATGY 3 cut(s) 957, 2662, 2773
XcmI CCANNNNNNNNNTGG 1 cut(s) 149
XhoI CTCGAG 2 cut(s) 1108, 3131
XmiI GTMKAC 1 cut(s) 2023
XmnI GAANNNNTTC 3 cut(s) 335, 545, 833
Zsp2I ATGCAT 2 cut(s) 1723, 2203
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.