Nuclear pore complex protein
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom09g09660 pycom17g14180 |
| rosa_laevigata | RLG00000001874 RLG00000027916 |
| rosa_multiflora | Rmu_co8207192.1_g000001 Rmu_sc0023243.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00151190 Rroxscaffold_3G00232580 |
| rosa_rugosa | Rorug01G0317100 |
| rosa_samantha | Rh3BG172100 Rh7AG386600 Rh7AG395400 Rh7CG405900 Rh7CG414100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 153 |
| AciI | CCGC | 1 cut(s) | 4 |
| AclWI | GGATC | 1 cut(s) | 182 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 153 |
| AgsI | TTSAA | 1 cut(s) | 65 |
| AlwI | GGATC | 1 cut(s) | 182 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 121 |
| AspS9I | GGNCC | 1 cut(s) | 178 |
| AvaII | GGWCC | 1 cut(s) | 178 |
| BccI | CCATC | 1 cut(s) | 8 |
| Bme18I | GGWCC | 1 cut(s) | 178 |
| BmgT120I | GGNCC | 1 cut(s) | 178 |
| BmiI | GGNNCC | 1 cut(s) | 145 |
| BmsI | GCATC | 3 cut(s) | 50, 63, 166 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 153 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 153 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 153 |
| Bsp143I | GATC | 1 cut(s) | 187 |
| BspACI | CCGC | 1 cut(s) | 4 |
| BspLI | GGNNCC | 1 cut(s) | 145 |
| BspPI | GGATC | 1 cut(s) | 182 |
| BspQI | GCTCTTC | 1 cut(s) | 66 |
| BssMI | GATC | 1 cut(s) | 187 |
| Bst6I | CTCTTC | 2 cut(s) | 66, 178 |
| BstC8I | GCNNGC | 1 cut(s) | 6 |
| BstDEI | CTNAG | 1 cut(s) | 95 |
| BstKTI | GATC | 1 cut(s) | 190 |
| BstMBI | GATC | 1 cut(s) | 187 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 38 |
| BstX2I | RGATCY | 1 cut(s) | 187 |
| BstYI | RGATCY | 1 cut(s) | 187 |
| Cac8I | GCNNGC | 1 cut(s) | 6 |
| Cfr13I | GGNCC | 1 cut(s) | 178 |
| CviAII | CATG | 1 cut(s) | 111 |
| CviJI | RGCY | 1 cut(s) | 8 |
| CviKI_1 | RGCY | 1 cut(s) | 8 |
| DdeI | CTNAG | 1 cut(s) | 95 |
| DpnI | GATC | 1 cut(s) | 189 |
| DpnII | GATC | 1 cut(s) | 187 |
| Eam1104I | CTCTTC | 2 cut(s) | 66, 178 |
| EarI | CTCTTC | 2 cut(s) | 66, 178 |
| Eco47I | GGWCC | 1 cut(s) | 178 |
| EcoT22I | ATGCAT | 1 cut(s) | 78 |
| FaeI | CATG | 1 cut(s) | 114 |
| FaiI | YATR | 6 cut(s) | 112, 137, 141, 152, 154, 167 |
| FatI | CATG | 1 cut(s) | 110 |
| FauNDI | CATATG | 1 cut(s) | 152 |
| FspEI | CC | 9 cut(s) | 51, 52, 96, 101, 126, 139, 145, 160, 161 |
| Hin1II | CATG | 1 cut(s) | 114 |
| HinfI | GANTC | 4 cut(s) | 53, 99, 107, 128 |
| Hpy188I | TCNGA | 2 cut(s) | 127, 162 |
| Hpy188III | TCNNGA | 1 cut(s) | 83 |
| HpyCH4V | TGCA | 3 cut(s) | 41, 76, 114 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 38 |
| HpyF3I | CTNAG | 1 cut(s) | 95 |
| Hsp92II | CATG | 1 cut(s) | 114 |
| Kzo9I | GATC | 1 cut(s) | 187 |
| LguI | GCTCTTC | 1 cut(s) | 66 |
| LpnPI | CCDG | 2 cut(s) | 96, 101 |
| LweI | GCATC | 3 cut(s) | 50, 63, 166 |
| MalI | GATC | 1 cut(s) | 189 |
| MboI | GATC | 1 cut(s) | 187 |
| MboII | GAAGA | 4 cut(s) | 53, 116, 182, 195 |
| MflI | RGATCY | 1 cut(s) | 187 |
| MluCI | AATT | 1 cut(s) | 132 |
| MlyI | GAGTC | 3 cut(s) | 47, 93, 137 |
| MmeI | TCCRAC | 1 cut(s) | 171 |
| Mph1103I | ATGCAT | 1 cut(s) | 78 |
| MroXI | GAANNNNTTC | 1 cut(s) | 121 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 38 |
| NdeI | CATATG | 1 cut(s) | 152 |
| NdeII | GATC | 1 cut(s) | 187 |
| NlaIII | CATG | 1 cut(s) | 114 |
| NlaIV | GGNNCC | 1 cut(s) | 145 |
| NsiI | ATGCAT | 1 cut(s) | 78 |
| PciSI | GCTCTTC | 1 cut(s) | 66 |
| PdmI | GAANNNNTTC | 1 cut(s) | 121 |
| PfeI | GAWTC | 1 cut(s) | 107 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 153 |
| PleI | GAGTC | 3 cut(s) | 47, 93, 136 |
| PpsI | GAGTC | 3 cut(s) | 47, 93, 136 |
| PspN4I | GGNNCC | 1 cut(s) | 145 |
| PspPI | GGNCC | 1 cut(s) | 178 |
| PsuI | RGATCY | 1 cut(s) | 187 |
| SapI | GCTCTTC | 1 cut(s) | 66 |
| Sau3AI | GATC | 1 cut(s) | 187 |
| Sau96I | GGNCC | 1 cut(s) | 178 |
| SchI | GAGTC | 3 cut(s) | 47, 93, 137 |
| SetI | ASST | 1 cut(s) | 90 |
| SfaNI | GCATC | 3 cut(s) | 50, 63, 166 |
| SgeI | CNNG | 7 cut(s) | 17, 62, 77, 95, 100, 113, 123 |
| SinI | GGWCC | 1 cut(s) | 178 |
| Sse9I | AATT | 1 cut(s) | 132 |
| SsiI | CCGC | 1 cut(s) | 4 |
| TaqI | TCGA | 1 cut(s) | 102 |
| TaqII | GACCGA | 1 cut(s) | 195 |
| TasI | AATT | 1 cut(s) | 132 |
| TfiI | GAWTC | 1 cut(s) | 107 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 153 |
| VpaK11BI | GGWCC | 1 cut(s) | 178 |
| XmnI | GAANNNNTTC | 1 cut(s) | 121 |
| Zsp2I | ATGCAT | 1 cut(s) | 78 |