Rh7CG430000

vinorine synthase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0015639
Physical Location & Seq
Reverse (-)
56291805 .. 56294124
2320 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG430000.1

Sequence Viewer

Length: 1377 bp
ATGGAGGTGACTATTGTTTCCAGAGATACCATCAAACCAGCAGCGACTTCCTCTTCACTTCATCGCCATCAAAAACCTTACAAACTTTGCATCATCGATCAACTCATTCCAGCAACTTATACCCCAATGGTTTTCTTCTACCCCATCACTGACCCCAATTTCAATCTCCCACAAACCCTAGCCAACTTGAAAAACTCACTCTCACGTACCCTCACTCTGTACTACCCATTTTCCGGGAGGACCCAAAACAACCTCTACATAAATGACTTTGATGCGGGTGTTCCCTACCTCGAGGCCCAAGTCAAATGTTCCATGTTAGAGTTTCTTGAGCTAAAAGAAATCGAGTTGCTCAACCGGTTCATTCCGTTGCCTCCATTTCGCAAGGAAACTGAAGATAATCATGATTTGCTACCCTTGATAGCATTTCAAGTCAGTGTTTTTGCTTGCGGTGGGATATCAATTGGGGTCTCTCTATCTCACAAGATCTTTGACGGGGTAACTGCAGATACTTTCCTCAAGTCTTGGGCTGCTATTTGTCGTGGGGATCATGATGAGAAAACCATGACAACACTACACCTTAATCTCTCCCAAGCGTCGTTAACTTTTCCGGCAAGAGATGATTTACCACAAAAATATACAGCTTTCGTGGAGAGCCTGTGGTTCCAGGAGAAAAACTATGTTACAAGGAGATTTGTGTTTGATGCTAAAGCCATAGCGACACTACGTGACCGAGCAAAGAGTGAGCTTGTGCCCAATCCAACACGTGTTGAGACACCGACTTGTTTTCTATGGAAACATGCAATATCTGCTTCTAGACTTGTTTCGACAGGTAATTCACAACGAGCATCCCTAGTAGCACATGCAGTGAACTTGAGGAGGCGACTGAATCCCCCAATGGCAGATAATATCATTGGAAATATAATTTGGTTTGCCACAGCACTCAACAACCATACCGATGAGGCAGAGACTACTCAGTTGTGTGATTTGTTGAAGTTGTTACGTATGTCTTTCGAAGGATTTGACAATGATTATTTGCAGACATTTTGCGGAGAAGAGGGACTTGGAGCCTTTTCTAAATACTTCAATCAGTTACTGGAAGTCATGCATTCCTTAGAGTCACCACCAGAAACTTACGGTTTCACTAGCTGGACTAACATTCTTAGTGAAATTGACTTTGGATGGGGAAGGCCAGTTTGGATTGGGGCCGGGGGAAGTGTCGGACCTGCCTTTAGGAACTTCATAGTGCTTGTTGAAACACAGTGGGGTAATGGCATTGAAGCATGGGTGACTTTGGATAAAAAGCAAATGGCTATAATGGAGAAAGATCCTCAGTTTTTAGCATTTGCTTCTCCAAACCCGCGTATTTCAGGCATATGA

Protein Analysis

458

Amino Acids

51.71

Weight (kDa)

5.97

Isoelectric Point (pI)

38.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 1 - 445 4e-72 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 290
Acc36I ACCTGC 1 cut(s) 1231
AccII CGCG 1 cut(s) 1360
AciI CCGC 4 cut(s) 275, 447, 1047, 1358
AclWI GGATC 2 cut(s) 552, 1319
AcuI CTGAAG 1 cut(s) 411
AcvI CACGTG 1 cut(s) 764
AdeI CACNNNGTG 1 cut(s) 725
AfaI GTAC 2 cut(s) 208, 221
AfiI CCNNNNNNNGG 1 cut(s) 233
AflIII ACRYGT 2 cut(s) 761, 763
AgeI ACCGGT 1 cut(s) 354
AgsI TTSAA 7 cut(s) 163, 190, 428, 991, 1084, 1253, 1277
AjnI CCWGG 1 cut(s) 663
AjuI GAANNNNNNNTTGG 8 cut(s) 907, 939, 1044, 1076, 1158, 1177, 1190, 1209
AluBI AGCT 4 cut(s) 331, 641, 745, 1146
AluI AGCT 4 cut(s) 331, 641, 745, 1146
Alw26I GTCTC 3 cut(s) 472, 764, 959
AlwI GGATC 2 cut(s) 552, 1319
AlwNI CAGNNNCTG 1 cut(s) 1093
Ama87I CYCGRG 1 cut(s) 290
AoxI GGCC 3 cut(s) 294, 1187, 1203
ApeKI GCWGC 2 cut(s) 41, 527
AsiGI ACCGGT 1 cut(s) 354
AspS9I GGNCC 4 cut(s) 240, 295, 1203, 1220
AsuC2I CCSGG 2 cut(s) 235, 1207
AsuHPI GGTGA 3 cut(s) 19, 1110, 1297
AsuII TTCGAA 1 cut(s) 1011
AvaI CYCGRG 1 cut(s) 290
AvaII GGWCC 2 cut(s) 240, 1220
BaeGI GKGCMC 1 cut(s) 753
BbrPI CACGTG 1 cut(s) 764
BbvI GCAGC 2 cut(s) 53, 514
BccI CCATC 4 cut(s) 38, 75, 152, 1173
BciT130I CCWGG 1 cut(s) 665
BcnI CCSGG 2 cut(s) 235, 1207
BcoDI GTCTC 3 cut(s) 472, 764, 959
BfaI CTAG 4 cut(s) 179, 813, 851, 1143
BfmI CTRYAG 1 cut(s) 501
BfuAI ACCTGC 1 cut(s) 1231
BglII AGATCT 1 cut(s) 483
BisI GCNGC 2 cut(s) 42, 528
BlsI GCNGC 2 cut(s) 43, 529
Bme1390I CCNGG 3 cut(s) 235, 665, 1207
Bme18I GGWCC 2 cut(s) 240, 1220
BmeT110I CYCGRG 1 cut(s) 290
BmgT120I GGNCC 4 cut(s) 240, 295, 1203, 1220
BmiI GGNNCC 4 cut(s) 242, 662, 1066, 1204
BmrFI CCNGG 3 cut(s) 235, 665, 1207
BmsI GCATC 4 cut(s) 99, 262, 691, 854
Bpu14I TTCGAA 1 cut(s) 1011
BpuEI CTTGAG 3 cut(s) 347, 500, 892
BpuMI CCSGG 2 cut(s) 235, 1207
Bsa29I ATCGAT 1 cut(s) 96
BsaAI YACGTR 4 cut(s) 206, 725, 764, 1001
BsaI GGTCTC 1 cut(s) 472
BsaJI CCNNGG 1 cut(s) 1206
BsaWI WCCGGW 1 cut(s) 354
BsaXI ACNNNNNCTCC 2 cut(s) 641, 671
Bsc4I CCNNNNNNNGG 1 cut(s) 233
Bse118I RCCGGY 1 cut(s) 354
Bse1I ACTGG 2 cut(s) 1098, 1190
BseBI CCWGG 1 cut(s) 665
BseCI ATCGAT 1 cut(s) 96
BseDI CCNNGG 1 cut(s) 1206
BseGI GGATG 2 cut(s) 845, 1184
BseLI CCNNNNNNNGG 1 cut(s) 233
BseMII CTCAG 2 cut(s) 986, 1343
BseNI ACTGG 2 cut(s) 1098, 1190
BseRI GAGGAG 1 cut(s) 889
BseSI GKGCMC 1 cut(s) 753
BseXI GCAGC 2 cut(s) 53, 514
Bsh1236I CGCG 1 cut(s) 1360
BshFI GGCC 3 cut(s) 296, 1189, 1205
BshTI ACCGGT 1 cut(s) 354
BshVI ATCGAT 1 cut(s) 96
BsiHKCI CYCGRG 1 cut(s) 290
BsiSI CCGG 4 cut(s) 234, 355, 608, 1206
BslFI GGGAC 1 cut(s) 1071
BslI CCNNNNNNNGG 1 cut(s) 233
BsmAI GTCTC 3 cut(s) 472, 764, 959
BsmFI GGGAC 1 cut(s) 1071
BsmI GAATGC 1 cut(s) 1105
BsnI GGCC 3 cut(s) 296, 1189, 1205
Bso31I GGTCTC 1 cut(s) 472
BsoBI CYCGRG 1 cut(s) 290
Bsp119I TTCGAA 1 cut(s) 1011
Bsp1286I GDGCHC 1 cut(s) 753
Bsp143I GATC 4 cut(s) 97, 483, 544, 1324
BspACI CCGC 4 cut(s) 275, 447, 1047, 1358
BspANI GGCC 3 cut(s) 296, 1189, 1205
BspCNI CTCAG 2 cut(s) 985, 1342
BspDI ATCGAT 1 cut(s) 96
BspFNI CGCG 1 cut(s) 1360
BspHI TCATGA 2 cut(s) 400, 547
BspLI GGNNCC 4 cut(s) 242, 662, 1066, 1204
BspMAI CTGCAG 1 cut(s) 505
BspMI ACCTGC 1 cut(s) 1231
BspPI GGATC 2 cut(s) 552, 1319
BspT104I TTCGAA 1 cut(s) 1011
BspTNI GGTCTC 1 cut(s) 472
BsrFI RCCGGY 1 cut(s) 354
BsrI ACTGG 2 cut(s) 1098, 1190
BssAI RCCGGY 1 cut(s) 354
BssECI CCNNGG 1 cut(s) 1206
BssMI GATC 4 cut(s) 97, 483, 544, 1324
Bst2UI CCWGG 1 cut(s) 665
Bst4CI ACNGT 2 cut(s) 1136, 1260
Bst6I CTCTTC 2 cut(s) 58, 1047
BstAPI GCANNNNNTGC 1 cut(s) 806
BstBAI YACGTR 4 cut(s) 206, 725, 764, 1001
BstBI TTCGAA 1 cut(s) 1011
BstC8I GCNNGC 1 cut(s) 445
BstDEI CTNAG 4 cut(s) 972, 1111, 1160, 1329
BstF5I GGATG 2 cut(s) 845, 1184
BstFNI CGCG 1 cut(s) 1360
BstKTI GATC 4 cut(s) 100, 486, 547, 1327
BstMAI GTCTC 3 cut(s) 472, 764, 959
BstMBI GATC 4 cut(s) 97, 483, 544, 1324
BstMWI GCNNNNNNNGC 1 cut(s) 806
BstNI CCWGG 1 cut(s) 665
BstNSI RCATGY 2 cut(s) 800, 863
BstSCI CCNGG 3 cut(s) 233, 663, 1205
BstSFI CTRYAG 1 cut(s) 501
BstSLI GKGCMC 1 cut(s) 753
BstSNI TACGTA 1 cut(s) 1001
BstUI CGCG 1 cut(s) 1360
BstV1I GCAGC 2 cut(s) 53, 514
BstX2I RGATCY 2 cut(s) 483, 1324
BstYI RGATCY 2 cut(s) 483, 1324
Bsu15I ATCGAT 1 cut(s) 96
BsuRI GGCC 3 cut(s) 296, 1189, 1205
BsuTUI ATCGAT 1 cut(s) 96
BtgZI GCGATG 1 cut(s) 47
BtsCI GGATG 2 cut(s) 845, 1184
BtsI GCAGTG 1 cut(s) 870
BtsIMutI CAGTG 4 cut(s) 147, 439, 870, 1265
BveI ACCTGC 1 cut(s) 1231
Cac8I GCNNGC 1 cut(s) 445
CaiI CAGNNNCTG 1 cut(s) 1093
CciI TCATGA 2 cut(s) 400, 547
Cfr10I RCCGGY 1 cut(s) 354
Cfr13I GGNCC 4 cut(s) 240, 295, 1203, 1220
ClaI ATCGAT 1 cut(s) 96
CseI GACGC 1 cut(s) 582
Csp6I GTAC 2 cut(s) 207, 220
CspAI ACCGGT 1 cut(s) 354
CviAII CATG 8 cut(s) 313, 401, 548, 562, 797, 860, 1102, 1281
CviQI GTAC 2 cut(s) 207, 220
DdeI CTNAG 4 cut(s) 972, 1111, 1160, 1329
DpnI GATC 4 cut(s) 99, 485, 546, 1326
DpnII GATC 4 cut(s) 97, 483, 544, 1324
DraIII CACNNNGTG 1 cut(s) 725
Eam1104I CTCTTC 2 cut(s) 58, 1047
EarI CTCTTC 2 cut(s) 58, 1047
Eco105I TACGTA 1 cut(s) 1001
Eco31I GGTCTC 1 cut(s) 472
Eco32I GATATC 1 cut(s) 456
Eco47I GGWCC 2 cut(s) 240, 1220
Eco57I CTGAAG 1 cut(s) 411
Eco72I CACGTG 1 cut(s) 764
Eco88I CYCGRG 1 cut(s) 290
EcoO109I RGGNCCY 1 cut(s) 240
EcoRII CCWGG 1 cut(s) 663
EcoRV GATATC 1 cut(s) 456
EcoT22I ATGCAT 1 cut(s) 1107
FaeI CATG 8 cut(s) 316, 404, 551, 565, 800, 863, 1105, 1284
FalI AAGNNNNNCTT 2 cut(s) 1044, 1076
FaqI GGGAC 1 cut(s) 1071
FatI CATG 8 cut(s) 312, 400, 547, 561, 796, 859, 1101, 1280
FauI CCCGC 2 cut(s) 268, 1365
FauNDI CATATG 1 cut(s) 1373
Fnu4HI GCNGC 2 cut(s) 42, 528
FokI GGATG 2 cut(s) 832, 1191
Fsp4HI GCNGC 2 cut(s) 42, 528
FspBI CTAG 4 cut(s) 179, 813, 851, 1143
GluI GCNGC 2 cut(s) 42, 528
HaeIII GGCC 3 cut(s) 296, 1189, 1205
HapII CCGG 4 cut(s) 234, 355, 608, 1206
HgaI GACGC 1 cut(s) 582
Hin1II CATG 8 cut(s) 316, 404, 551, 565, 800, 863, 1105, 1284
HincII GTYRAC 1 cut(s) 600
HindII GTYRAC 1 cut(s) 600
HinfI GANTC 2 cut(s) 886, 1115
HpaI GTTAAC 1 cut(s) 600
HpaII CCGG 4 cut(s) 234, 355, 608, 1206
HphI GGTGA 3 cut(s) 19, 1110, 1297
Hpy166II GTNNAC 2 cut(s) 600, 868
Hpy188I TCNGA 1 cut(s) 1220
Hpy188III TCNNGA 5 cut(s) 21, 326, 401, 548, 813
Hpy8I GTNNAC 2 cut(s) 600, 868
Hpy99I CGWCG 1 cut(s) 598
HpyAV CCTTC 2 cut(s) 1007, 1179
HpyCH4III ACNGT 2 cut(s) 1136, 1260
HpyCH4IV ACGT 4 cut(s) 205, 724, 763, 1000
HpyCH4V TGCA 6 cut(s) 90, 503, 800, 863, 1036, 1105
HpyF10VI GCNNNNNNNGC 1 cut(s) 806
HpyF3I CTNAG 4 cut(s) 972, 1111, 1160, 1329
HpySE526I ACGT 4 cut(s) 205, 724, 763, 1000
Hsp92II CATG 8 cut(s) 316, 404, 551, 565, 800, 863, 1105, 1284
KspAI GTTAAC 1 cut(s) 600
Kzo9I GATC 4 cut(s) 97, 483, 544, 1324
LmnI GCTCC 1 cut(s) 1064
Lsp1109I GCAGC 2 cut(s) 53, 514
LweI GCATC 4 cut(s) 99, 262, 691, 854
MaeI CTAG 4 cut(s) 179, 813, 851, 1143
MaeII ACGT 4 cut(s) 205, 724, 763, 1000
MaeIII GTNAC 8 cut(s) 7, 496, 679, 725, 996, 1089, 1116, 1285
MalI GATC 4 cut(s) 99, 485, 546, 1326
MboI GATC 4 cut(s) 97, 483, 544, 1324
MboII GAAGA 4 cut(s) 45, 127, 404, 1064
MfeI CAATTG 1 cut(s) 459
MflI RGATCY 2 cut(s) 483, 1324
MhlI GDGCHC 1 cut(s) 753
MluCI AATT 5 cut(s) 157, 459, 832, 921, 1167
MlyI GAGTC 1 cut(s) 1124
MmeI TCCRAC 2 cut(s) 782, 1198
Mph1103I ATGCAT 1 cut(s) 1107
MseI TTAA 2 cut(s) 579, 599
MslI CAYNNNNRTG 1 cut(s) 954
MspI CCGG 4 cut(s) 234, 355, 608, 1206
MspR9I CCNGG 3 cut(s) 235, 665, 1207
MunI CAATTG 1 cut(s) 459
Mva1269I GAATGC 1 cut(s) 1105
MvaI CCWGG 1 cut(s) 665
MvnI CGCG 1 cut(s) 1360
MwoI GCNNNNNNNGC 1 cut(s) 806
NciI CCSGG 2 cut(s) 235, 1207
NdeI CATATG 1 cut(s) 1373
NdeII GATC 4 cut(s) 97, 483, 544, 1324
NlaIII CATG 8 cut(s) 316, 404, 551, 565, 800, 863, 1105, 1284
NlaIV GGNNCC 4 cut(s) 242, 662, 1066, 1204
NmuCI GTSAC 4 cut(s) 7, 725, 1116, 1285
NsiI ATGCAT 1 cut(s) 1107
NspI RCATGY 2 cut(s) 800, 863
NspV TTCGAA 1 cut(s) 1011
PaeR7I CTCGAG 1 cut(s) 290
PagI TCATGA 2 cut(s) 400, 547
PctI GAATGC 1 cut(s) 1105
PfeI GAWTC 1 cut(s) 886
PfoI TCCNGGA 2 cut(s) 233, 663
PinAI ACCGGT 1 cut(s) 354
PkrI GCNGC 2 cut(s) 43, 529
PleI GAGTC 1 cut(s) 1123
PmaCI CACGTG 1 cut(s) 764
PmlI CACGTG 1 cut(s) 764
PpsI GAGTC 1 cut(s) 1123
Ppu21I YACGTR 4 cut(s) 206, 725, 764, 1001
PpuMI RGGWCCY 1 cut(s) 240
Psp5II RGGWCCY 1 cut(s) 240
Psp6I CCWGG 1 cut(s) 663
PspCI CACGTG 1 cut(s) 764
PspGI CCWGG 1 cut(s) 663
PspN4I GGNNCC 4 cut(s) 242, 662, 1066, 1204
PspPI GGNCC 4 cut(s) 240, 295, 1203, 1220
PspPPI RGGWCCY 1 cut(s) 240
PspXI VCTCGAGB 1 cut(s) 290
PstI CTGCAG 1 cut(s) 505
PstNI CAGNNNCTG 1 cut(s) 1093
PsuI RGATCY 2 cut(s) 483, 1324
RsaI GTAC 2 cut(s) 208, 221
RsaNI GTAC 2 cut(s) 207, 220
RseI CAYNNNNRTG 1 cut(s) 954
SaqAI TTAA 2 cut(s) 579, 599
SatI GCNGC 2 cut(s) 42, 528
Sau3AI GATC 4 cut(s) 97, 483, 544, 1324
Sau96I GGNCC 4 cut(s) 240, 295, 1203, 1220
SchI GAGTC 1 cut(s) 1124
ScrFI CCNGG 3 cut(s) 235, 665, 1207
SduI GDGCHC 1 cut(s) 753
SfaNI GCATC 4 cut(s) 99, 262, 691, 854
SfcI CTRYAG 1 cut(s) 501
Sfr274I CTCGAG 1 cut(s) 290
SfuI TTCGAA 1 cut(s) 1011
SinI GGWCC 2 cut(s) 240, 1220
SlaI CTCGAG 1 cut(s) 290
SmiMI CAYNNNNRTG 1 cut(s) 954
SmlI CTYRAG 4 cut(s) 290, 326, 515, 871
SmoI CTYRAG 4 cut(s) 290, 326, 515, 871
SnaBI TACGTA 1 cut(s) 1001
Sse9I AATT 5 cut(s) 157, 459, 832, 921, 1167
SsiI CCGC 4 cut(s) 275, 447, 1047, 1358
SspMI CTAG 4 cut(s) 179, 813, 851, 1143
StyD4I CCNGG 3 cut(s) 233, 663, 1205
TaaI ACNGT 2 cut(s) 1136, 1260
TaiI ACGT 4 cut(s) 208, 727, 766, 1003
TaqI TCGA 5 cut(s) 96, 291, 342, 824, 1011
TaqII GACCGA 1 cut(s) 744
TasI AATT 5 cut(s) 157, 459, 832, 921, 1167
TatI WGTACW 1 cut(s) 219
TfiI GAWTC 1 cut(s) 886
Tru1I TTAA 2 cut(s) 579, 599
Tru9I TTAA 2 cut(s) 579, 599
TscAI CASTG 4 cut(s) 154, 439, 870, 1265
TseFI GTSAC 4 cut(s) 7, 725, 1116, 1285
TseI GCWGC 2 cut(s) 41, 527
Tsp45I GTSAC 4 cut(s) 7, 725, 1116, 1285
TspDTI ATGAA 3 cut(s) 50, 349, 1228
TspGWI ACGGA 1 cut(s) 354
TspRI CASTG 4 cut(s) 154, 439, 870, 1265
VpaK11BI GGWCC 2 cut(s) 240, 1220
XbaI TCTAGA 1 cut(s) 812
XceI RCATGY 2 cut(s) 800, 863
XhoI CTCGAG 1 cut(s) 290
XspI CTAG 4 cut(s) 179, 813, 851, 1143
Zsp2I ATGCAT 1 cut(s) 1107
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.