Rh7CG516600

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Reverse (-)
69588817 .. 69590118
1302 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG516600.1

Sequence Viewer

Length: 282 bp
ATGATGGAGGTTCAAATCCAGGAATCAGTTGTTTGTAGGCCTCAGGTTAAGGTACAATTTCAGCTTGGTTCAGAAACATATTCTGTCAGCGGAAACAAGGGCATTCTTTCCGAGCAACTGGTTTCAGTTAAAGAGGAGAGCATGGCCATATTGAAGGACTTCATCACCAAACATAATGTTCCTAATGATGTCCCTGATGAACCTGTTGAAGACTCTTCTGAAGATGATGGTGAAATTCTTGAGAAGCCTCAAGTCAAGTCAAAGAAGACAAAGCTTACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

93

Amino Acids

10.39

Weight (kDa)

4.71

Isoelectric Point (pI)

52.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013860)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 90
AcoI YGGCCR 1 cut(s) 144
AcsI RAATTY 1 cut(s) 234
AcuI CTGAAG 1 cut(s) 240
AfaI GTAC 1 cut(s) 54
AgsI TTSAA 3 cut(s) 14, 154, 209
AjnI CCWGG 1 cut(s) 18
AluBI AGCT 2 cut(s) 64, 274
AluI AGCT 2 cut(s) 64, 274
AoxI GGCC 2 cut(s) 38, 144
ApoI RAATTY 1 cut(s) 234
Asp700I GAANNNNTTC 1 cut(s) 158
AsuHPI GGTGA 2 cut(s) 157, 242
AxyI CCTNAGG 1 cut(s) 42
BalI TGGCCA 1 cut(s) 146
BbsI GAAGAC 2 cut(s) 216, 272
BccI CCATC 1 cut(s) 221
BciT130I CCWGG 1 cut(s) 20
Bme1390I CCNGG 1 cut(s) 20
BmrFI CCNGG 1 cut(s) 20
BpiI GAAGAC 2 cut(s) 216, 272
BpuEI CTTGAG 2 cut(s) 234, 260
Bse1I ACTGG 1 cut(s) 123
Bse21I CCTNAGG 1 cut(s) 42
BseBI CCWGG 1 cut(s) 20
BseMII CTCAG 1 cut(s) 56
BseNI ACTGG 1 cut(s) 123
BseRI GAGGAG 1 cut(s) 149
BshFI GGCC 2 cut(s) 40, 146
BslFI GGGAC 1 cut(s) 176
BsmFI GGGAC 1 cut(s) 176
BsmI GAATGC 1 cut(s) 102
BsnI GGCC 2 cut(s) 40, 146
BspACI CCGC 1 cut(s) 90
BspANI GGCC 2 cut(s) 40, 146
BspCNI CTCAG 1 cut(s) 55
BsrI ACTGG 1 cut(s) 123
Bst2UI CCWGG 1 cut(s) 20
Bst6I CTCTTC 1 cut(s) 220
BstDEI CTNAG 1 cut(s) 42
BstNI CCWGG 1 cut(s) 20
BstSCI CCNGG 1 cut(s) 18
BstV2I GAAGAC 2 cut(s) 216, 272
Bsu36I CCTNAGG 1 cut(s) 42
BsuRI GGCC 2 cut(s) 40, 146
Csp6I GTAC 1 cut(s) 53
CviAII CATG 1 cut(s) 142
CviJI RGCY 5 cut(s) 40, 64, 146, 247, 274
CviKI_1 RGCY 5 cut(s) 40, 64, 146, 247, 274
CviQI GTAC 1 cut(s) 53
DdeI CTNAG 1 cut(s) 42
EaeI YGGCCR 1 cut(s) 144
Eam1104I CTCTTC 1 cut(s) 220
EarI CTCTTC 1 cut(s) 220
Eco147I AGGCCT 1 cut(s) 40
Eco57I CTGAAG 1 cut(s) 240
Eco81I CCTNAGG 1 cut(s) 42
EcoRII CCWGG 1 cut(s) 18
FaeI CATG 1 cut(s) 145
FaiI YATR 4 cut(s) 79, 143, 149, 174
FaqI GGGAC 1 cut(s) 176
FatI CATG 1 cut(s) 141
HaeIII GGCC 2 cut(s) 40, 146
Hin1II CATG 1 cut(s) 145
HindIII AAGCTT 1 cut(s) 272
HinfI GANTC 2 cut(s) 23, 212
HphI GGTGA 2 cut(s) 157, 242
Hpy188I TCNGA 3 cut(s) 73, 112, 220
Hpy188III TCNNGA 1 cut(s) 239
HpyAV CCTTC 1 cut(s) 148
HpyF3I CTNAG 1 cut(s) 42
Hsp92II CATG 1 cut(s) 145
LpnPI CCDG 6 cut(s) 5, 29, 32, 104, 207, 216
MboII GAAGA 4 cut(s) 207, 221, 233, 277
MlsI TGGCCA 1 cut(s) 146
MluCI AATT 2 cut(s) 56, 234
MluNI TGGCCA 1 cut(s) 146
MlyI GAGTC 1 cut(s) 206
MnlI CCTC 3 cut(s) 51, 127, 258
Mox20I TGGCCA 1 cut(s) 146
MroXI GAANNNNTTC 1 cut(s) 158
MscI TGGCCA 1 cut(s) 146
MseI TTAA 2 cut(s) 48, 129
Msp20I TGGCCA 1 cut(s) 146
MspA1I CMGCKG 1 cut(s) 90
MspR9I CCNGG 1 cut(s) 20
Mva1269I GAATGC 1 cut(s) 102
MvaI CCWGG 1 cut(s) 20
NlaIII CATG 1 cut(s) 145
PceI AGGCCT 1 cut(s) 40
PctI GAATGC 1 cut(s) 102
PdmI GAANNNNTTC 1 cut(s) 158
PfeI GAWTC 1 cut(s) 23
PfoI TCCNGGA 1 cut(s) 18
PleI GAGTC 1 cut(s) 206
PpsI GAGTC 1 cut(s) 206
Psp6I CCWGG 1 cut(s) 18
PspGI CCWGG 1 cut(s) 18
RsaI GTAC 1 cut(s) 54
RsaNI GTAC 1 cut(s) 53
SaqAI TTAA 2 cut(s) 48, 129
SchI GAGTC 1 cut(s) 206
ScrFI CCNGG 1 cut(s) 20
SetI ASST 6 cut(s) 12, 48, 54, 66, 205, 276
SmlI CTYRAG 2 cut(s) 239, 249
SmoI CTYRAG 2 cut(s) 239, 249
Sse9I AATT 2 cut(s) 56, 234
SseBI AGGCCT 1 cut(s) 40
SsiI CCGC 1 cut(s) 90
StuI AGGCCT 1 cut(s) 40
StyD4I CCNGG 1 cut(s) 18
TasI AATT 2 cut(s) 56, 234
TfiI GAWTC 1 cut(s) 23
Tru1I TTAA 2 cut(s) 48, 129
Tru9I TTAA 2 cut(s) 48, 129
TspDTI ATGAA 2 cut(s) 151, 213
XapI RAATTY 1 cut(s) 234
XmnI GAANNNNTTC 1 cut(s) 158
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.