Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00162

Orthogroup ID

OG0008525

Physical Location & Seq

Genomic Coordinates Forward (+)

68825 .. 73113

Gene Structure 4289 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G004190.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1608 bp

ATGGCTGCGATTAATCCAGGTAACAGGAACAATCCCGAAACGGCTCCGCCGGTTCAATCGCCGCGTCAGGGCGGTGGTGGTGATAGTGTGAGCAGTCCGCAGTCGCGTCGGGCGGCCAGGGTGGCGGCGGCGGCGGCGCCTTGGACGCAAATTGTGCGAGGGGAATCTGAGCCGCCGATCACGGCCGCTCCTTCCTCGCCATCATCATCGACCGCTGCTGTGACTGAGCAACAAGCTGCAGCAGCGGCTTCTTTTTCGTCGGCCTCGCCTTCTCAGTCTAATTCGCCGTCGCCGACTCCGGCGGAGGATTCAGTGGGTGAGGGCTCGGAGAACGGTAGTGGGCCCAACGGCAATGCGGGTAAGAAGCCCGCCTGGAACAAGCCGTCCAATGGAGCCATTGAGGTTGGGCCGGTAATGGGAGCTGTTTCTTGGCCTGCTTTGTCCGACGCTCGGGCTTCCACTAAATCGTCTTCTGAATCTTTGAAAGGTGTATCTGATGCGCCTTTGTCCGTCTCTGTCACGCAGGGGGCTGGAACTACAACTATCTCATCACTGAAACAAGTGAATTCTTCTTCGACTCCAACCCATAGTGGACCTACTCGCCAGAGATCGATGAAACAAAGAAATAATGCAAGTGCATCCTCTAATGGTGGCATCCCCCAGCATCAAATGCCAGCTGGCCAAGGTGTTGAAGTGACTCCAAATAACCCTTCACCTAAGGATCATAGCCATAGGAGTGCATTTGGGTCACAAACTCACAGCAGCAACGATCATCCACAGCAACGTAATTCCTTCAGAAACCGAAATGGTGGTCCACATCCCCGTGGAGATGGTTCTCACCATCACAACTATGGCAGCAGGCATCACGACCGAGGAAGTCAAGATTGGAACAATCATCGAAATTTTAACAGTAGAGACAATCACATGCATCCTCAGAGAGTTGTTCCTAGAGCAATGAGGCCATCTCACCAAGCACCGGCACCACCAAATGCTCCCGCGTTTATCCCCCAGCCTATGAGGTCTTTCGGTCCCATAGGATTTGACGTGCAAGGACCACTGGTATACTTTCAACAGGATCCACTAGTACCTTTTATGGCACCACCACGGCATCCCCTGATATTTGCAGGTCCAGATCTTCAGCTGCATAATAAGATTATTAATCAGATAGATTATTATTTCAGTAATGAAAATTTAATTAAAGATACTTTCTTGCGGCGAAACATGGATGATCAGGGATGGGTTCGTGTTAAATTAATAGCAGGCTTCAACAAAGTTATGAATTTGACAGACAATATCCAGATTATACTGGATGCTTTGAGAATGTCAACTGTGGTGGAAGTACAGGGTGATAAAATAAGGAGGCGCAATGATTGGATGAGATGGGTGATGCCAGCTGCTCAGTCTCCTGCTGTTTCAAGCTCTCAGACCCTTGGAAAATCTGGAAATGATATGCTATCAGCTCATATCCAAAGTATTTCACTGGATGAGAAGACTACTAACAACAAGAATATTCAGAACAATACCCAGCCGCAGCCGTCCTCTGGTGATGGATCTGGTCAATTCAGTGTTCAAGGAGGTGCAGATCGCACTATTTCAGCAAGAAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005844 GO:0007275 GO:0007568 GO:0008150 GO:0009719 GO:0009725 GO:0009737 GO:0009751 GO:0009753 GO:0010033 GO:0010150 GO:0014070 GO:0032501 GO:0032502 GO:0032991 GO:0033993 GO:0042221 GO:0042493 GO:0044424 GO:0044464 GO:0046677 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0090693 GO:0097159 GO:0097305 GO:0099402 GO:1901363 GO:1901700 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

535

Amino Acids

57.09

Weight (kDa)

10.05

Isoelectric Point (pI)

65.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
La	PF05383	385 - 440	8.1e-22	La domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008525)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35890 AT4G35890 AT5G66100 AT5G66100
fragaria_vesca	FvH4_1g11260 FvH4_1g11260 FvH4_1g11260
malus_domestica	MD02G1125000.v1.1 MD15G1240700.v1.1
prunus_persica	Prupe.7G173400_v2.0.a1
pyrus_communis	pycom02g09760 pycom15g21230
rosa_chinensis	RchiOBHm_Chr2g0098711
rosa_laevigata	RLG00000016823
rosa_multiflora	Rmu_sc0002776.1_g000023
rosa_roxburghii	Rroxscaffold_2G00143790
rosa_rugosa	Rorug02G0074000 Rorug02G0074100
rosa_samantha	Rh2AG122000 Rh2BG125500 Rh2CG126600 Rh2DG127600
rosa_wichuraiana	Rw0G004190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1115
AccB1I	GGYRCC	3 cut(s)	136, 979, 1096
AccBSI	CCGCTC	1 cut(s)	188
AccI	GTMKAC	1 cut(s)	1062
AccII	CGCG	3 cut(s)	64, 106, 998
AclWI	GGATC	4 cut(s)	729, 1070, 1083, 1558
AcoI	YGGCCR	3 cut(s)	114, 183, 679
AcsI	RAATTY	4 cut(s)	565, 901, 1189, 1279
AcuI	CTGAAG	2 cut(s)	778, 1121
AcyI	GRCGYC	1 cut(s)	137
AfaI	GTAC	2 cut(s)	1086, 1341
AfiI	CCNNNNNNNGG	6 cut(s)	68, 389, 416, 450, 976, 1541
AgsI	TTSAA	7 cut(s)	56, 484, 692, 1070, 1267, 1416, 1571
AhlI	ACTAGT	1 cut(s)	1081
AjiI	CACGTC	1 cut(s)	1045
AjnI	CCWGG	3 cut(s)	16, 116, 371
AjuI	GAANNNNNNNTTGG	4 cut(s)	694, 726, 868, 900
AloI	GAACNNNNNNTCC	2 cut(s)	368, 400
AluBI	AGCT	7 cut(s)	236, 422, 677, 1141, 1394, 1419, 1460
AluI	AGCT	7 cut(s)	236, 422, 677, 1141, 1394, 1419, 1460
Alw26I	GTCTC	3 cut(s)	517, 909, 1407
AlwI	GGATC	4 cut(s)	729, 1070, 1083, 1558
Ama87I	CYCGRG	1 cut(s)	450
AoxI	GGCC	8 cut(s)	114, 183, 261, 341, 407, 431, 679, 959
ApaI	GGGCCC	1 cut(s)	345
ApoI	RAATTY	4 cut(s)	565, 901, 1189, 1279
ArsI	GACNNNNNNTTYG	2 cut(s)	796, 828
AseI	ATTAAT	3 cut(s)	12, 1158, 1253
AspLEI	GCGC	3 cut(s)	139, 502, 1365
AspS9I	GGNCC	8 cut(s)	341, 342, 407, 593, 812, 1028, 1052, 1127
AsuHPI	GGTGA	8 cut(s)	92, 329, 705, 830, 959, 1358, 1396, 1556
AvaI	CYCGRG	1 cut(s)	450
AvaII	GGWCC	5 cut(s)	593, 812, 1028, 1052, 1127
AxyI	CCTNAGG	1 cut(s)	717
BaeGI	GKGCMC	1 cut(s)	345
BalI	TGGCCA	1 cut(s)	681
BamHI	GGATCC	1 cut(s)	1075
BanI	GGYRCC	3 cut(s)	136, 979, 1096
BanII	GRGCYC	2 cut(s)	326, 345
BbsI	GAAGAC	2 cut(s)	462, 1496
BbvI	GCAGC	9 cut(s)	202, 223, 251, 254, 774, 867, 1128, 1381, 1543
BccI	CCATC	7 cut(s)	208, 824, 849, 970, 1230, 1374, 1541
BceAI	ACGGC	7 cut(s)	57, 198, 271, 364, 367, 1121, 1519
BcgI	CGANNNNNNTGC	2 cut(s)	89, 123
BciT130I	CCWGG	3 cut(s)	18, 118, 373
BclI	TGATCA	1 cut(s)	1228
BcoDI	GTCTC	3 cut(s)	517, 909, 1407
BcuI	ACTAGT	1 cut(s)	1081
BfaI	CTAG	2 cut(s)	948, 1082
BfmI	CTRYAG	1 cut(s)	237
BfoI	RGCGCY	1 cut(s)	140
BfuAI	ACCTGC	1 cut(s)	1115
BglI	GCCNNNNNGGC	1 cut(s)	122
BglII	AGATCT	1 cut(s)	1132
Bme1390I	CCNGG	3 cut(s)	18, 118, 373
Bme18I	GGWCC	5 cut(s)	593, 812, 1028, 1052, 1127
BmeT110I	CYCGRG	1 cut(s)	450
BmgBI	CACGTC	1 cut(s)	1045
BmgT120I	GGNCC	8 cut(s)	341, 342, 407, 593, 812, 1028, 1052, 1127
BmiI	GGNNCC	8 cut(s)	45, 138, 343, 394, 981, 1030, 1077, 1098
BmrFI	CCNGG	3 cut(s)	18, 118, 373
BmsI	GCATC	9 cut(s)	487, 647, 663, 673, 871, 937, 1117, 1300, 1377
BpiI	GAAGAC	2 cut(s)	462, 1496
BplI	GAGNNNNNCTC	2 cut(s)	949, 981
Bsa29I	ATCGAT	1 cut(s)	611
BsaHI	GRCGYC	1 cut(s)	137
BsaJI	CCNNGG	7 cut(s)	117, 140, 682, 823, 871, 1103, 1429
BsaXI	ACNNNNNCTCC	2 cut(s)	172, 202
Bsc4I	CCNNNNNNNGG	6 cut(s)	68, 389, 416, 450, 976, 1541
Bse118I	RCCGGY	3 cut(s)	49, 409, 976
Bse1I	ACTGG	3 cut(s)	1062, 1311, 1485
Bse21I	CCTNAGG	1 cut(s)	717
Bse3DI	GCAATG	3 cut(s)	358, 960, 1372
BseBI	CCWGG	3 cut(s)	18, 118, 373
BseCI	ATCGAT	1 cut(s)	611
BseDI	CCNNGG	7 cut(s)	117, 140, 682, 823, 871, 1103, 1429
BseLI	CCNNNNNNNGG	6 cut(s)	68, 389, 416, 450, 976, 1541
BseMI	GCAATG	3 cut(s)	358, 960, 1372
BseMII	CTCAG	6 cut(s)	159, 216, 287, 947, 1412, 1436
BseNI	ACTGG	3 cut(s)	1062, 1311, 1485
BseSI	GKGCMC	1 cut(s)	345
BseX3I	CGGCCG	1 cut(s)	183
BseXI	GCAGC	9 cut(s)	202, 223, 251, 254, 774, 867, 1128, 1381, 1543
BseYI	CCCAGC	3 cut(s)	660, 1008, 1524
BsgI	GTGCAG	1 cut(s)	1599
Bsh1236I	CGCG	3 cut(s)	64, 106, 998
Bsh1285I	CGRYCG	3 cut(s)	186, 213, 871
BshFI	GGCC	8 cut(s)	116, 185, 263, 343, 409, 433, 681, 961
BshNI	GGYRCC	3 cut(s)	136, 979, 1096
BshVI	ATCGAT	1 cut(s)	611
BsiEI	CGRYCG	3 cut(s)	186, 213, 871
BsiHKCI	CYCGRG	1 cut(s)	450
BsiSI	CCGG	4 cut(s)	50, 299, 410, 977
BslFI	GGGAC	1 cut(s)	1014
BslI	CCNNNNNNNGG	6 cut(s)	68, 389, 416, 450, 976, 1541
BsmAI	GTCTC	3 cut(s)	517, 909, 1407
BsmBI	CGTCTC	1 cut(s)	517
BsmFI	GGGAC	1 cut(s)	1014
BsnI	GGCC	8 cut(s)	116, 185, 263, 343, 409, 433, 681, 961
BsoBI	CYCGRG	1 cut(s)	450
Bsp120I	GGGCCC	1 cut(s)	341
Bsp1286I	GDGCHC	2 cut(s)	326, 345
Bsp143I	GATC	9 cut(s)	177, 608, 721, 769, 1075, 1132, 1228, 1550, 1582
BspANI	GGCC	8 cut(s)	116, 185, 263, 343, 409, 433, 681, 961
BspCNI	CTCAG	6 cut(s)	160, 217, 286, 946, 1411, 1435
BspDI	ATCGAT	1 cut(s)	611
BspFNI	CGCG	3 cut(s)	64, 106, 998
BspLI	GGNNCC	8 cut(s)	45, 138, 343, 394, 981, 1030, 1077, 1098
BspMAI	CTGCAG	1 cut(s)	241
BspMI	ACCTGC	1 cut(s)	1115
BspPI	GGATC	4 cut(s)	729, 1070, 1083, 1558
BspT107I	GGYRCC	3 cut(s)	136, 979, 1096
BsrBI	CCGCTC	1 cut(s)	188
BsrDI	GCAATG	3 cut(s)	358, 960, 1372
BsrFI	RCCGGY	3 cut(s)	49, 409, 976
BsrI	ACTGG	3 cut(s)	1062, 1311, 1485
BssAI	RCCGGY	3 cut(s)	49, 409, 976
BssECI	CCNNGG	7 cut(s)	117, 140, 682, 823, 871, 1103, 1429
BssMI	GATC	9 cut(s)	177, 608, 721, 769, 1075, 1132, 1228, 1550, 1582
BssNAI	GTATAC	1 cut(s)	1063
BssNI	GRCGYC	1 cut(s)	137
BssT1I	CCWWGG	3 cut(s)	140, 682, 1429
Bst1107I	GTATAC	1 cut(s)	1063
Bst2UI	CCWGG	3 cut(s)	18, 118, 373
Bst4CI	ACNGT	3 cut(s)	335, 911, 1330
BstACI	GRCGYC	1 cut(s)	137
BstAPI	GCANNNNNTGC	2 cut(s)	154, 670
BstC8I	GCNNGC	7 cut(s)	369, 435, 675, 679, 860, 1261, 1392
BstDEI	CTNAG	7 cut(s)	168, 225, 273, 717, 933, 1398, 1422
BstDSI	CCRYGG	2 cut(s)	823, 1103
BstFNI	CGCG	3 cut(s)	64, 106, 998
BstH2I	RGCGCY	1 cut(s)	140
BstHHI	GCGC	3 cut(s)	139, 502, 1365
BstKTI	GATC	9 cut(s)	180, 611, 724, 772, 1078, 1135, 1231, 1553, 1585
BstMAI	GTCTC	3 cut(s)	517, 909, 1407
BstMBI	GATC	9 cut(s)	177, 608, 721, 769, 1075, 1132, 1228, 1550, 1582
BstMCI	CGRYCG	3 cut(s)	186, 213, 871
BstMWI	GCNNNNNNNGC	8 cut(s)	122, 131, 134, 145, 154, 242, 245, 670
BstNI	CCWGG	3 cut(s)	18, 118, 373
BstNSI	RCATGY	1 cut(s)	928
BstSCI	CCNGG	3 cut(s)	16, 116, 371
BstSFI	CTRYAG	1 cut(s)	237
BstSLI	GKGCMC	1 cut(s)	345
BstUI	CGCG	3 cut(s)	64, 106, 998
BstV1I	GCAGC	9 cut(s)	202, 223, 251, 254, 774, 867, 1128, 1381, 1543
BstV2I	GAAGAC	2 cut(s)	462, 1496
BstX2I	RGATCY	3 cut(s)	1075, 1132, 1550
BstYI	RGATCY	3 cut(s)	1075, 1132, 1550
BstZ17I	GTATAC	1 cut(s)	1063
BstZI	CGGCCG	1 cut(s)	183
Bsu15I	ATCGAT	1 cut(s)	611
Bsu36I	CCTNAGG	1 cut(s)	717
BsuRI	GGCC	8 cut(s)	116, 185, 263, 343, 409, 433, 681, 961
BsuTUI	ATCGAT	1 cut(s)	611
BtgI	CCRYGG	2 cut(s)	823, 1103
BtrI	CACGTC	1 cut(s)	1045
BtsIMutI	CAGTG	5 cut(s)	318, 551, 1055, 1478, 1570
BveI	ACCTGC	1 cut(s)	1115
Cac8I	GCNNGC	7 cut(s)	369, 435, 675, 679, 860, 1261, 1392
CfoI	GCGC	3 cut(s)	139, 502, 1365
Cfr10I	RCCGGY	3 cut(s)	49, 409, 976
Cfr13I	GGNCC	8 cut(s)	341, 342, 407, 593, 812, 1028, 1052, 1127
ClaI	ATCGAT	1 cut(s)	611
CseI	GACGC	4 cut(s)	53, 95, 154, 455
Csp6I	GTAC	2 cut(s)	1085, 1340
CspCI	CAANNNNNGTGG	2 cut(s)	1314, 1349
CviAII	CATG	2 cut(s)	925, 1222
CviQI	GTAC	2 cut(s)	1085, 1340
DdeI	CTNAG	7 cut(s)	168, 225, 273, 717, 933, 1398, 1422
DinI	GGCGCC	1 cut(s)	138
DpnI	GATC	9 cut(s)	179, 610, 723, 771, 1077, 1134, 1230, 1552, 1584
DpnII	GATC	9 cut(s)	177, 608, 721, 769, 1075, 1132, 1228, 1550, 1582
EaeI	YGGCCR	3 cut(s)	114, 183, 679
EagI	CGGCCG	1 cut(s)	183
EciI	GGCGGA	2 cut(s)	36, 317
EclXI	CGGCCG	1 cut(s)	183
Eco130I	CCWWGG	3 cut(s)	140, 682, 1429
Eco24I	GRGCYC	2 cut(s)	326, 345
Eco47I	GGWCC	5 cut(s)	593, 812, 1028, 1052, 1127
Eco52I	CGGCCG	1 cut(s)	183
Eco57I	CTGAAG	2 cut(s)	778, 1121
Eco81I	CCTNAGG	1 cut(s)	717
Eco88I	CYCGRG	1 cut(s)	450
EcoRI	GAATTC	1 cut(s)	565
EcoRII	CCWGG	3 cut(s)	16, 116, 371
EcoT14I	CCWWGG	3 cut(s)	140, 682, 1429
EcoT22I	ATGCAT	1 cut(s)	930
EcoT38I	GRGCYC	2 cut(s)	326, 345
EgeI	GGCGCC	1 cut(s)	138
EheI	GGCGCC	1 cut(s)	138
ErhI	CCWWGG	3 cut(s)	140, 682, 1429
Esp3I	CGTCTC	1 cut(s)	517
FaeI	CATG	2 cut(s)	928, 1225
FaqI	GGGAC	1 cut(s)	1014
FatI	CATG	2 cut(s)	924, 1221
FauI	CCCGC	3 cut(s)	349, 376, 1003
FbaI	TGATCA	1 cut(s)	1228
FblI	GTMKAC	1 cut(s)	1062
FriOI	GRGCYC	2 cut(s)	326, 345
FspBI	CTAG	2 cut(s)	948, 1082
GlaI	GCGC	3 cut(s)	138, 501, 1364
GsaI	CCCAGC	3 cut(s)	664, 1012, 1528
HaeII	RGCGCY	1 cut(s)	140
HaeIII	GGCC	8 cut(s)	116, 185, 263, 343, 409, 433, 681, 961
HapII	CCGG	4 cut(s)	50, 299, 410, 977
HgaI	GACGC	4 cut(s)	53, 95, 154, 455
HhaI	GCGC	3 cut(s)	139, 502, 1365
Hin1I	GRCGYC	1 cut(s)	137
Hin1II	CATG	2 cut(s)	928, 1225
Hin6I	GCGC	3 cut(s)	137, 500, 1363
HinP1I	GCGC	3 cut(s)	137, 500, 1363
HincII	GTYRAC	1 cut(s)	1326
HindII	GTYRAC	1 cut(s)	1326
HinfI	GANTC	6 cut(s)	164, 295, 308, 476, 577, 697
HpaII	CCGG	4 cut(s)	50, 299, 410, 977
HphI	GGTGA	8 cut(s)	92, 329, 705, 830, 959, 1358, 1396, 1556
Hpy166II	GTNNAC	4 cut(s)	593, 815, 1063, 1326
Hpy188III	TCNNGA	6 cut(s)	35, 866, 881, 1130, 1297, 1440
Hpy8I	GTNNAC	4 cut(s)	593, 815, 1063, 1326
Hpy99I	CGWCG	4 cut(s)	111, 262, 292, 449
HpyAV	CCTTC	4 cut(s)	201, 279, 720, 802
HpyCH4III	ACNGT	3 cut(s)	335, 911, 1330
HpyCH4IV	ACGT	2 cut(s)	784, 1044
HpyCH4V	TGCA	9 cut(s)	239, 632, 638, 740, 928, 1048, 1124, 1144, 1580
HpyF10VI	GCNNNNNNNGC	8 cut(s)	122, 131, 134, 145, 154, 242, 245, 670
HpyF3I	CTNAG	7 cut(s)	168, 225, 273, 717, 933, 1398, 1422
HpySE526I	ACGT	2 cut(s)	784, 1044
Hsp92I	GRCGYC	1 cut(s)	137
Hsp92II	CATG	2 cut(s)	928, 1225
HspAI	GCGC	3 cut(s)	137, 500, 1363
KasI	GGCGCC	1 cut(s)	136
Ksp22I	TGATCA	1 cut(s)	1228
Kzo9I	GATC	9 cut(s)	177, 608, 721, 769, 1075, 1132, 1228, 1550, 1582
LmnI	GCTCC	5 cut(s)	49, 193, 392, 419, 997
Lsp1109I	GCAGC	9 cut(s)	202, 223, 251, 254, 774, 867, 1128, 1381, 1543
LweI	GCATC	9 cut(s)	487, 647, 663, 673, 871, 937, 1117, 1300, 1377
MaeI	CTAG	2 cut(s)	948, 1082
MaeII	ACGT	2 cut(s)	784, 1044
MaeIII	GTNAC	5 cut(s)	20, 220, 517, 694, 747
MalI	GATC	9 cut(s)	179, 610, 723, 771, 1077, 1134, 1230, 1552, 1584
MbiI	CCGCTC	1 cut(s)	188
MboI	GATC	9 cut(s)	177, 608, 721, 769, 1075, 1132, 1228, 1550, 1582
MboII	GAAGA	5 cut(s)	462, 561, 564, 1127, 1501
MflI	RGATCY	3 cut(s)	1075, 1132, 1550
MhlI	GDGCHC	2 cut(s)	326, 345
MlsI	TGGCCA	1 cut(s)	681
MluNI	TGGCCA	1 cut(s)	681
Mly113I	GGCGCC	1 cut(s)	137
MlyI	GAGTC	3 cut(s)	289, 571, 691
MmeI	TCCRAC	2 cut(s)	468, 605
Mox20I	TGGCCA	1 cut(s)	681
Mph1103I	ATGCAT	1 cut(s)	930
MscI	TGGCCA	1 cut(s)	681
MseI	TTAA	7 cut(s)	12, 906, 1158, 1193, 1197, 1248, 1253
MslI	CAYNNNNRTG	3 cut(s)	735, 822, 849
Msp20I	TGGCCA	1 cut(s)	681
MspA1I	CMGCKG	5 cut(s)	215, 245, 677, 1141, 1394
MspI	CCGG	4 cut(s)	50, 299, 410, 977
MspR9I	CCNGG	3 cut(s)	18, 118, 373
MvaI	CCWGG	3 cut(s)	18, 118, 373
MvnI	CGCG	3 cut(s)	64, 106, 998
MwoI	GCNNNNNNNGC	8 cut(s)	122, 131, 134, 145, 154, 242, 245, 670
NarI	GGCGCC	1 cut(s)	137
NdeII	GATC	9 cut(s)	177, 608, 721, 769, 1075, 1132, 1228, 1550, 1582
NlaIII	CATG	2 cut(s)	928, 1225
NlaIV	GGNNCC	8 cut(s)	45, 138, 343, 394, 981, 1030, 1077, 1098
NmuCI	GTSAC	4 cut(s)	220, 517, 694, 747
NsiI	ATGCAT	1 cut(s)	930
NspI	RCATGY	1 cut(s)	928
PacI	TTAATTAA	1 cut(s)	1197
PcsI	WCGNNNNNNNCGW	1 cut(s)	290
PfeI	GAWTC	3 cut(s)	164, 308, 476
PleI	GAGTC	3 cut(s)	289, 571, 691
PluTI	GGCGCC	1 cut(s)	140
PpsI	GAGTC	3 cut(s)	289, 571, 691
PshBI	ATTAAT	3 cut(s)	12, 1158, 1253
Psp6I	CCWGG	3 cut(s)	16, 116, 371
PspFI	CCCAGC	3 cut(s)	660, 1008, 1524
PspGI	CCWGG	3 cut(s)	16, 116, 371
PspN4I	GGNNCC	8 cut(s)	45, 138, 343, 394, 981, 1030, 1077, 1098
PspOMI	GGGCCC	1 cut(s)	341
PspPI	GGNCC	8 cut(s)	341, 342, 407, 593, 812, 1028, 1052, 1127
PstI	CTGCAG	1 cut(s)	241
PsuI	RGATCY	3 cut(s)	1075, 1132, 1550
PvuII	CAGCTG	3 cut(s)	677, 1141, 1394
RsaI	GTAC	2 cut(s)	1086, 1341
RsaNI	GTAC	2 cut(s)	1085, 1340
RseI	CAYNNNNRTG	3 cut(s)	735, 822, 849
SaqAI	TTAA	7 cut(s)	12, 906, 1158, 1193, 1197, 1248, 1253
Sau3AI	GATC	9 cut(s)	177, 608, 721, 769, 1075, 1132, 1228, 1550, 1582
Sau96I	GGNCC	8 cut(s)	341, 342, 407, 593, 812, 1028, 1052, 1127
SchI	GAGTC	3 cut(s)	289, 571, 691
ScrFI	CCNGG	3 cut(s)	18, 118, 373
SduI	GDGCHC	2 cut(s)	326, 345
SfaNI	GCATC	9 cut(s)	487, 647, 663, 673, 871, 937, 1117, 1300, 1377
SfcI	CTRYAG	1 cut(s)	237
SfoI	GGCGCC	1 cut(s)	138
SinI	GGWCC	5 cut(s)	593, 812, 1028, 1052, 1127
SmiMI	CAYNNNNRTG	3 cut(s)	735, 822, 849
SpeI	ACTAGT	1 cut(s)	1081
SspDI	GGCGCC	1 cut(s)	136
SspI	AATATT	1 cut(s)	1510
SspMI	CTAG	2 cut(s)	948, 1082
StyD4I	CCNGG	3 cut(s)	16, 116, 371
StyI	CCWWGG	3 cut(s)	140, 682, 1429
TaaI	ACNGT	3 cut(s)	335, 911, 1330
TaiI	ACGT	2 cut(s)	787, 1047
TaqI	TCGA	4 cut(s)	209, 575, 611, 898
TaqII	GACCGA	2 cut(s)	885, 1016
TatI	WGTACW	1 cut(s)	1339
TfiI	GAWTC	3 cut(s)	164, 308, 476
Tru1I	TTAA	7 cut(s)	12, 906, 1158, 1193, 1197, 1248, 1253
Tru9I	TTAA	7 cut(s)	12, 906, 1158, 1193, 1197, 1248, 1253
TscAI	CASTG	5 cut(s)	318, 558, 1062, 1485, 1570
TseFI	GTSAC	4 cut(s)	220, 517, 694, 747
Tsp45I	GTSAC	4 cut(s)	220, 517, 694, 747
TspDTI	ATGAA	3 cut(s)	629, 1200, 1292
TspGWI	ACGGA	1 cut(s)	499
TspRI	CASTG	5 cut(s)	318, 558, 1062, 1485, 1570
VpaK11BI	GGWCC	5 cut(s)	593, 812, 1028, 1052, 1127
VspI	ATTAAT	3 cut(s)	12, 1158, 1253
XapI	RAATTY	4 cut(s)	565, 901, 1189, 1279
XceI	RCATGY	1 cut(s)	928
XcmI	CCANNNNNNNNNTGG	1 cut(s)	848
XmiI	GTMKAC	1 cut(s)	1062
XspI	CTAG	2 cut(s)	948, 1082
Zsp2I	ATGCAT	1 cut(s)	930

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.