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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0420181 |
| rosa_roxburghii | Rroxscaffold_2G00118540 Rroxscaffold_2G00118850 Rroxscaffold_4G00287940 |
| rosa_samantha | Rh1AG154700 Rh1BG124000 Rh2AG285900 Rh2BG240000 Rh2BG297500 Rh2CG275300 Rh2DG311400 |
| rosa_wichuraiana | Rw0G009690 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 1 cut(s) | 89 |
| AluBI | AGCT | 3 cut(s) | 42, 148, 168 |
| AluI | AGCT | 3 cut(s) | 42, 148, 168 |
| Alw21I | GWGCWC | 3 cut(s) | 44, 84, 134 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 147, 195 |
| BanII | GRGCYC | 1 cut(s) | 44 |
| BbsI | GAAGAC | 1 cut(s) | 61 |
| Bbv12I | GWGCWC | 3 cut(s) | 44, 84, 134 |
| BceAI | ACGGC | 1 cut(s) | 9 |
| BfmI | CTRYAG | 1 cut(s) | 15 |
| BpiI | GAAGAC | 1 cut(s) | 61 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 116, 148 |
| BpuEI | CTTGAG | 1 cut(s) | 28 |
| BsiHKAI | GWGCWC | 3 cut(s) | 44, 84, 134 |
| BsmI | GAATGC | 3 cut(s) | 7, 195, 197 |
| Bsp1286I | GDGCHC | 3 cut(s) | 44, 84, 134 |
| Bsp143I | GATC | 2 cut(s) | 159, 217 |
| BspMAI | CTGCAG | 1 cut(s) | 19 |
| BspQI | GCTCTTC | 1 cut(s) | 72 |
| BssMI | GATC | 2 cut(s) | 159, 217 |
| Bst6I | CTCTTC | 1 cut(s) | 72 |
| BstC8I | GCNNGC | 1 cut(s) | 170 |
| BstDEI | CTNAG | 1 cut(s) | 214 |
| BstKTI | GATC | 2 cut(s) | 162, 220 |
| BstMBI | GATC | 2 cut(s) | 159, 217 |
| BstSFI | CTRYAG | 1 cut(s) | 15 |
| BstV2I | GAAGAC | 1 cut(s) | 61 |
| Cac8I | GCNNGC | 1 cut(s) | 170 |
| CviAII | CATG | 1 cut(s) | 152 |
| CviJI | RGCY | 5 cut(s) | 24, 42, 101, 148, 168 |
| CviKI_1 | RGCY | 5 cut(s) | 24, 42, 101, 148, 168 |
| DdeI | CTNAG | 1 cut(s) | 214 |
| DpnI | GATC | 2 cut(s) | 161, 219 |
| DpnII | GATC | 2 cut(s) | 159, 217 |
| Eam1104I | CTCTTC | 1 cut(s) | 72 |
| EarI | CTCTTC | 1 cut(s) | 72 |
| Ecl136II | GAGCTC | 1 cut(s) | 42 |
| Eco24I | GRGCYC | 1 cut(s) | 44 |
| Eco53kI | GAGCTC | 1 cut(s) | 42 |
| EcoICRI | GAGCTC | 1 cut(s) | 42 |
| EcoT22I | ATGCAT | 1 cut(s) | 197 |
| EcoT38I | GRGCYC | 1 cut(s) | 44 |
| FaeI | CATG | 1 cut(s) | 155 |
| FaiI | YATR | 6 cut(s) | 38, 136, 138, 153, 177, 182 |
| FatI | CATG | 1 cut(s) | 151 |
| FauNDI | CATATG | 1 cut(s) | 136 |
| FriOI | GRGCYC | 1 cut(s) | 44 |
| FspEI | CC | 9 cut(s) | 3, 36, 38, 48, 99, 109, 115, 125, 226 |
| Hin1II | CATG | 1 cut(s) | 155 |
| HindIII | AAGCTT | 1 cut(s) | 166 |
| Hpy188III | TCNNGA | 1 cut(s) | 45 |
| HpyCH4V | TGCA | 3 cut(s) | 17, 172, 195 |
| HpyF3I | CTNAG | 1 cut(s) | 214 |
| Hsp92II | CATG | 1 cut(s) | 155 |
| Kzo9I | GATC | 2 cut(s) | 159, 217 |
| LguI | GCTCTTC | 1 cut(s) | 72 |
| LpnPI | CCDG | 2 cut(s) | 3, 99 |
| MalI | GATC | 2 cut(s) | 161, 219 |
| MboI | GATC | 2 cut(s) | 159, 217 |
| MboII | GAAGA | 2 cut(s) | 66, 89 |
| MhlI | GDGCHC | 3 cut(s) | 44, 84, 134 |
| MluCI | AATT | 1 cut(s) | 90 |
| MnlI | CCTC | 1 cut(s) | 133 |
| Mph1103I | ATGCAT | 1 cut(s) | 197 |
| MroXI | GAANNNNTTC | 2 cut(s) | 147, 195 |
| Mva1269I | GAATGC | 3 cut(s) | 7, 195, 197 |
| NdeI | CATATG | 1 cut(s) | 136 |
| NdeII | GATC | 2 cut(s) | 159, 217 |
| NlaIII | CATG | 1 cut(s) | 155 |
| NsiI | ATGCAT | 1 cut(s) | 197 |
| PciSI | GCTCTTC | 1 cut(s) | 72 |
| PctI | GAATGC | 3 cut(s) | 7, 195, 197 |
| PdmI | GAANNNNTTC | 2 cut(s) | 147, 195 |
| Psp124BI | GAGCTC | 1 cut(s) | 44 |
| PstI | CTGCAG | 1 cut(s) | 19 |
| SacI | GAGCTC | 1 cut(s) | 44 |
| SapI | GCTCTTC | 1 cut(s) | 72 |
| Sau3AI | GATC | 2 cut(s) | 159, 217 |
| SduI | GDGCHC | 3 cut(s) | 44, 84, 134 |
| SetI | ASST | 4 cut(s) | 44, 150, 170, 215 |
| SfcI | CTRYAG | 1 cut(s) | 15 |
| SgeI | CNNG | 7 cut(s) | 30, 57, 115, 126, 164, 181, 200 |
| SmlI | CTYRAG | 1 cut(s) | 43 |
| SmoI | CTYRAG | 1 cut(s) | 43 |
| Sse9I | AATT | 1 cut(s) | 90 |
| SstI | GAGCTC | 1 cut(s) | 44 |
| TasI | AATT | 1 cut(s) | 90 |
| TspDTI | ATGAA | 3 cut(s) | 17, 90, 140 |
| XmnI | GAANNNNTTC | 2 cut(s) | 147, 195 |
| Zsp2I | ATGCAT | 1 cut(s) | 197 |