Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig01097

Orthogroup ID

OG0005823

Physical Location & Seq

Genomic Coordinates Reverse (-)

108024 .. 117206

Gene Structure 9183 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G023660.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2283 bp

ATGGCTTTCTCACACACCTCGTCGTCGCCATGCACATCATTTCTCTCGCACCTCCAGTCTTCGTCTTCGTCTTCGCTGCTCAAATTACAGCACCCCCTCCTCCTCCTCCCCCAACGTCGCGCTCGCATTCGAATTCGAATTCGCGTCACGGCTTCTGCAGCAGCTGCCGTTGTTGAGTCTTCTTCAAACGGCGCCGTAGCGGCCAAACAGGACAGTTCCTACGGAAGACAGTTCTTTCCCTTGGCTGCCGTTGTTGGCCAAGATGCTATTAAAACTGCTCTGTTGCTTGGGGCTATAGACCGTGAAATTGGAGGAATTGCTATCTCCGGAAGGAGGGGAACAGCCAAAACAGTAATGGCCCGTGGTTTGCATGCAATTTTACCACCCATTGAAGTAGTCGTTGGTTCAATAGCAAATGCTGATCCAGCCTGTCCCGAAGAGTGGGAAGATGTTTTACCTGAACGCATGGAATTTGATTCTGCTGGTAATGTCAAGACTCAGATTGTTAGGTCTCCTTTTGTTCAGATTCCACTTGGAGTCACAGAGGACAGACTCATTGGATCTGTTGATGTTGAGGAGTCCGTGAGAACAGGAACCACTGTTTTCCAACCTGGCCTTCTTGCTGAAGCTCATAGAGGTGTATTATATGTTGATGAAATTAATCTTTTGGATGAGGGGATCAGTAATTTGCTTCTCAACGTATTAACTGAGGGAGTTAATATTGTTGAGAGAGAGGGAATGAGCTTTAGACACCCATGCAAGCCACTCTTGATTGCTACGTATAATCCTGAAGAGGGTGCTGTGCGTGAACACTTACTAGACCGTATTGCAATCAACTTGAGTGCAGATCTTCCGATGAGTTTTGATGATCGCGTTGCAGCTGTGGGCATTGCGACAAAATTTCAGGAATATAGTACTGAAGTCTTTAAAATGGTTCAAGAAGAAACAGAATTTGCAAAAACTCAGATCATTTTGGCAAGAGAGTATCTAAAGGACGTAGTTATAAGCAGAGAACAACTCAAGTATCTGGTTTTGGAAGCCCTGCGAGGTGGTTGCCAGGGACATAGAGCTGAGCTATATGCTTCCCGTGTTGCAAAATGCTTAGCTGCTCTAGATGGACGAGAAAAAGTTTATGCTGATGACCTGAAAAAAGCTGTAGAACTGGTCATACTTCCTCGCTCAATCATTAATGAGAACCCACCAGAACAGCAAAATCAACCGCCTCCACCTCCACCACCTCCTCAAAATCAAGAATCTGGGGAAGAGCAAAATGAGGAGCAAGAAGAAAAAGAGGATGACAATGATGAAGAGAAGGAAGAGAATGAAGATAATGAACAAGAGCAGGAACAGCTACCTGAAGAGTTTGTCTTTGATGCAGAAGGGGGTTTGGTGGATGAGAAGCTTCTTTTTTTTGCACAACAAGCGCAGAGACGCAAAGGGAAGGCTGGGAGAGCAAAGAATGTTATCTTTTCAGAGGATAGAGGTCGATACATTAAGCCAATGCTTCCAAAGGGACCTGTAAAGAGATTAGCTGTTGATGCAACTCTTAGAGTTGCTGCACCATATCAAAAATTGCGTAGGGAGAAGAACACTCAAGTTGGTAGGAAAGTTTTTGTTGAAAAAACTGACATGAGAGCAAAGAGAATGGCACGGAAAGCAGGAGCACTGGTTATATTTGTTGTTGATGCAAGTGGAAGCATGGCACTGAACCGAATGCAGAATGCAAAAGGTGCAGCGCTCAAGTTACTAGCTGAAAGTTATACGAGCAGAGATCAGGTTTCTATTATTCCTTTCCGTGGAGATTCTGCTGAAGTTCTTCTGCCTCCTTCTAGATCCATTGCAATGGCAAGAAATCGTCTTGAGAGACTTCCCTGTGGTGGAGGTTCTCCGCTTGCTCATGGTCTGACCACGGCTGTAAGGGTTGGGCTAAATGCAGAGAAGAGTGGTGATGTTGGACGTATAATGATTGTTGCAATAACTGATGGTAGAGCCAATATATCACTAAAAAGGTCCAATGACCCTGAAGCTGCTGCTGCTGCTACTGATGTCCCAAAACCTTCGGCAAAGGAGTTGAAGGATGAGATTCTTGAGGTTGCTGGTAAAATATACAAAGCAGGGATGTCTCTTCTCGTCATCGACACTGAAAATAAATTTGTTTCAACTGGTTTTGCCAAGGAGATTGCAAGAGTTGCTCAAGGAAAATACTATTACTTGCCAAATGCCTCAGATGCTGTAATCTCAGCTGCCACAAAGGACGCTTTGTCAACATTGAAAAACACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009532 GO:0009534 GO:0009536 GO:0009570 GO:0009579 GO:0010007 GO:0031976 GO:0031984 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:1902494

KEGG Pathways

Metabolic & Signaling

ko00860 ko01100 ko01110 map00860 map01100 map01110

Pfam Domains

Protein Families

Mg_chelatase VWA_2

Protein Analysis

760

Amino Acids

83.03

Weight (kDa)

5.96

Isoelectric Point (pI)

46.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Mg_chelatase	PF01078	198 - 265	9.7e-07	Magnesium chelatase, subunit ChlI
AAA_lid_2	PF17863	345 - 405	1.4e-13	AAA lid domain
VWA_2	PF13519	557 - 662	1.6e-12	von Willebrand factor type A domain
VWA	PF00092	557 - 678	4.2e-06	von Willebrand factor type A domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005823)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08520
fragaria_vesca	FvH4_3g28280 FvH4_3g28280 FvH4_3g28280 FvH4_3g28280 FvH4_3g28280 FvH4_3g28280 FvH4_3g28280 FvH4_3g28280 FvH4_3g28280 FvH4_3g28280 FvH4_3g28280
malus_domestica	MD03G1170000.v1.1 MD11G1187400.v1.1
prunus_persica	Prupe.4G257100_v2.0.a1 Prupe.4G257100_v2.0.a1
pyrus_communis	pycom11g16410 pycom11g16420
rosa_chinensis	RchiOBHm_Chr5g0051161
rosa_laevigata	RLG00000034758
rosa_multiflora	Rmu_sc0000446.1_g000012
rosa_roxburghii	Rroxscaffold_1G00029290
rosa_samantha	Rh5AG338500 Rh5BG348400 Rh5CG375500 Rh5DG361300
rosa_wichuraiana	Rw0G023660 Rw5G031970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1004
AccB1I	GGYRCC	1 cut(s)	191
AccII	CGCG	3 cut(s)	120, 144, 873
AccIII	TCCGGA	1 cut(s)	326
AciI	CCGC	3 cut(s)	200, 1220, 1889
AclWI	GGATC	4 cut(s)	416, 568, 686, 1827
AcoI	YGGCCR	2 cut(s)	201, 256
AcsI	RAATTY	6 cut(s)	132, 138, 470, 899, 950, 2150
AcuI	CTGAAG	6 cut(s)	645, 810, 939, 1377, 1830, 2043
AcyI	GRCGYC	1 cut(s)	192
AfaI	GTAC	1 cut(s)	916
AfeI	AGCGCT	1 cut(s)	1737
AfiI	CCNNNNNNNGG	5 cut(s)	333, 441, 794, 1796, 1877
AgsI	TTSAA	8 cut(s)	186, 392, 408, 938, 1619, 2074, 2160, 2272
AhdI	GACNNNNNGTC	1 cut(s)	2260
AjnI	CCWGG	2 cut(s)	610, 1056
AjuI	GAANNNNNNNTTGG	4 cut(s)	384, 416, 600, 632
Alw21I	GWGCWC	1 cut(s)	1666
Alw26I	GTCTC	4 cut(s)	516, 1423, 1858, 2127
AlwI	GGATC	4 cut(s)	416, 568, 686, 1827
AlwNI	CAGNNNCTG	2 cut(s)	164, 2231
Aor13HI	TCCGGA	1 cut(s)	326
Aor51HI	AGCGCT	1 cut(s)	1737
AoxI	GGCC	4 cut(s)	201, 256, 357, 613
ApoI	RAATTY	6 cut(s)	132, 138, 470, 899, 950, 2150
AseI	ATTAAT	2 cut(s)	660, 1188
Asp700I	GAANNNNTTC	1 cut(s)	1815
AspLEI	GCGC	4 cut(s)	122, 194, 1426, 1738
AspS9I	GGNCC	3 cut(s)	358, 1514, 2010
AsuHPI	GGTGA	1 cut(s)	1958
AsuII	TTCGAA	2 cut(s)	130, 136
AvaII	GGWCC	2 cut(s)	1514, 2010
BaeI	ACNNNNGTAYC	2 cut(s)	1007, 1040
BalI	TGGCCA	1 cut(s)	258
BanI	GGYRCC	1 cut(s)	191
BarI	GAAGNNNNNNTAC	2 cut(s)	438, 470
BbsI	GAAGAC	5 cut(s)	51, 57, 63, 171, 232
Bbv12I	GWGCWC	1 cut(s)	1666
BccI	CCATC	2 cut(s)	1109, 1976
BceAI	ACGGC	6 cut(s)	152, 165, 179, 205, 233, 1926
BcgI	CGANNNNNNTGC	2 cut(s)	1035, 1069
BciT130I	CCWGG	2 cut(s)	612, 1058
BcoDI	GTCTC	4 cut(s)	516, 1423, 1858, 2127
BfaI	CTAG	4 cut(s)	818, 1112, 1748, 1830
BfmI	CTRYAG	3 cut(s)	156, 294, 1155
BfoI	RGCGCY	2 cut(s)	195, 1739
BglI	GCCNNNNNGGC	1 cut(s)	200
BglII	AGATCT	1 cut(s)	847
BlpI	GCTNAGC	2 cut(s)	1071, 1102
BmcAI	AGTACT	1 cut(s)	916
Bme1390I	CCNGG	2 cut(s)	612, 1058
Bme18I	GGWCC	2 cut(s)	1514, 2010
BmeRI	GACNNNNNGTC	1 cut(s)	2260
BmgT120I	GGNCC	3 cut(s)	358, 1514, 2010
BmiI	GGNNCC	3 cut(s)	193, 595, 1515
BmrFI	CCNGG	2 cut(s)	612, 1058
BmsI	GCATC	5 cut(s)	253, 1363, 1528, 1675, 2218
BpiI	GAAGAC	5 cut(s)	51, 57, 63, 171, 232
BplI	GAGNNNNNCTC	2 cut(s)	1002, 1034
BpmI	CTGGAG	1 cut(s)	38
Bpu1102I	GCTNAGC	2 cut(s)	1071, 1102
Bpu14I	TTCGAA	2 cut(s)	130, 136
BpuEI	CTTGAG	7 cut(s)	859, 1004, 1578, 1724, 1880, 2108, 2178
BsaAI	YACGTR	1 cut(s)	780
BsaHI	GRCGYC	1 cut(s)	192
BsaI	GGTCTC	1 cut(s)	516
BsaJI	CCNNGG	6 cut(s)	240, 361, 1057, 1795, 1908, 2172
BsaWI	WCCGGW	1 cut(s)	326
BsaXI	ACNNNNNCTCC	2 cut(s)	1653, 1683
Bsc4I	CCNNNNNNNGG	5 cut(s)	333, 441, 794, 1796, 1877
Bse1I	ACTGG	4 cut(s)	55, 1167, 1671, 2167
Bse3DI	GCAATG	3 cut(s)	888, 1836, 1848
BseAI	TCCGGA	1 cut(s)	326
BseBI	CCWGG	2 cut(s)	612, 1058
BseDI	CCNNGG	6 cut(s)	240, 361, 1057, 1795, 1908, 2172
BseGI	GGATG	5 cut(s)	676, 1300, 1399, 2083, 2124
BseLI	CCNNNNNNNGG	5 cut(s)	333, 441, 794, 1796, 1877
BseMI	GCAATG	3 cut(s)	888, 1836, 1848
BseMII	CTCAG	6 cut(s)	512, 699, 977, 1062, 2238, 2253
BseNI	ACTGG	4 cut(s)	55, 1167, 1671, 2167
BseRI	GAGGAG	6 cut(s)	89, 92, 95, 590, 1230, 1289
BseYI	CCCAGC	1 cut(s)	1445
BsgI	GTGCAG	3 cut(s)	864, 1542, 1752
Bsh1236I	CGCG	3 cut(s)	120, 144, 873
BshFI	GGCC	4 cut(s)	203, 258, 359, 615
BshNI	GGYRCC	1 cut(s)	191
BsiHKAI	GWGCWC	1 cut(s)	1666
BsiSI	CCGG	1 cut(s)	327
BslFI	GGGAC	4 cut(s)	417, 1074, 1527, 2033
BslI	CCNNNNNNNGG	5 cut(s)	333, 441, 794, 1796, 1877
BsmAI	GTCTC	4 cut(s)	516, 1423, 1858, 2127
BsmBI	CGTCTC	1 cut(s)	1423
BsmFI	GGGAC	4 cut(s)	417, 1074, 1527, 2033
BsmI	GAATGC	3 cut(s)	126, 1719, 1726
BsnI	GGCC	4 cut(s)	203, 258, 359, 615
Bso31I	GGTCTC	1 cut(s)	516
Bsp119I	TTCGAA	2 cut(s)	130, 136
Bsp1286I	GDGCHC	1 cut(s)	1666
Bsp13I	TCCGGA	1 cut(s)	326
Bsp143I	GATC	8 cut(s)	421, 560, 678, 847, 868, 966, 1771, 1832
Bsp1720I	GCTNAGC	2 cut(s)	1071, 1102
BspACI	CCGC	3 cut(s)	200, 1220, 1889
BspANI	GGCC	4 cut(s)	203, 258, 359, 615
BspCNI	CTCAG	6 cut(s)	511, 700, 976, 1063, 2237, 2252
BspEI	TCCGGA	1 cut(s)	326
BspFNI	CGCG	3 cut(s)	120, 144, 873
BspLI	GGNNCC	3 cut(s)	193, 595, 1515
BspMAI	CTGCAG	1 cut(s)	160
BspPI	GGATC	4 cut(s)	416, 568, 686, 1827
BspQI	GCTCTTC	1 cut(s)	1257
BspT104I	TTCGAA	2 cut(s)	130, 136
BspT107I	GGYRCC	1 cut(s)	191
BspTNI	GGTCTC	1 cut(s)	516
BsrDI	GCAATG	3 cut(s)	888, 1836, 1848
BsrI	ACTGG	4 cut(s)	55, 1167, 1671, 2167
BssECI	CCNNGG	6 cut(s)	240, 361, 1057, 1795, 1908, 2172
BssMI	GATC	8 cut(s)	421, 560, 678, 847, 868, 966, 1771, 1832
BssNI	GRCGYC	1 cut(s)	192
BssT1I	CCWWGG	2 cut(s)	240, 2172
Bst2UI	CCWGG	2 cut(s)	612, 1058
Bst4CI	ACNGT	6 cut(s)	215, 231, 302, 352, 601, 824
Bst6I	CTCTTC	8 cut(s)	432, 786, 1257, 1302, 1311, 1353, 1934, 2130
BstACI	GRCGYC	1 cut(s)	192
BstAPI	GCANNNNNTGC	3 cut(s)	164, 1730, 2189
BstBAI	YACGTR	1 cut(s)	780
BstBI	TTCGAA	2 cut(s)	130, 136
BstC8I	GCNNGC	4 cut(s)	124, 372, 761, 1893
BstDEI	CTNAG	8 cut(s)	498, 708, 963, 1071, 1102, 1547, 2224, 2239
BstDSI	CCRYGG	3 cut(s)	361, 1795, 1908
BstF5I	GGATG	5 cut(s)	676, 1300, 1399, 2083, 2124
BstFNI	CGCG	3 cut(s)	120, 144, 873
BstH2I	RGCGCY	2 cut(s)	195, 1739
BstHHI	GCGC	4 cut(s)	122, 194, 1426, 1738
BstKTI	GATC	8 cut(s)	424, 563, 681, 850, 871, 969, 1774, 1835
BstMAI	GTCTC	4 cut(s)	516, 1423, 1858, 2127
BstMBI	GATC	8 cut(s)	421, 560, 678, 847, 868, 966, 1771, 1832
BstNI	CCWGG	2 cut(s)	612, 1058
BstNSI	RCATGY	1 cut(s)	374
BstSCI	CCNGG	2 cut(s)	610, 1056
BstSFI	CTRYAG	3 cut(s)	156, 294, 1155
BstSNI	TACGTA	1 cut(s)	780
BstUI	CGCG	3 cut(s)	120, 144, 873
BstV2I	GAAGAC	5 cut(s)	51, 57, 63, 171, 232
BstX2I	RGATCY	3 cut(s)	560, 847, 1832
BstXI	CCANNNNNNTGG	1 cut(s)	1843
BstYI	RGATCY	3 cut(s)	560, 847, 1832
BsuRI	GGCC	4 cut(s)	203, 258, 359, 615
BtgI	CCRYGG	3 cut(s)	361, 1795, 1908
BtsCI	GGATG	5 cut(s)	676, 1300, 1399, 2083, 2124
BtsIMutI	CAGTG	4 cut(s)	597, 1664, 1703, 2139
Cac8I	GCNNGC	4 cut(s)	124, 372, 761, 1893
CaiI	CAGNNNCTG	2 cut(s)	164, 2231
CfoI	GCGC	4 cut(s)	122, 194, 1426, 1738
Cfr13I	GGNCC	3 cut(s)	358, 1514, 2010
CseI	GACGC	3 cut(s)	133, 1440, 2264
Csp6I	GTAC	1 cut(s)	915
CviAII	CATG	8 cut(s)	30, 371, 466, 756, 1630, 1699, 1898, 2280
CviQI	GTAC	1 cut(s)	915
DdeI	CTNAG	8 cut(s)	498, 708, 963, 1071, 1102, 1547, 2224, 2239
DinI	GGCGCC	1 cut(s)	193
DpnI	GATC	8 cut(s)	423, 562, 680, 849, 870, 968, 1773, 1834
DpnII	GATC	8 cut(s)	421, 560, 678, 847, 868, 966, 1771, 1832
DraI	TTTAAA	1 cut(s)	928
DriI	GACNNNNNGTC	1 cut(s)	2260
EaeI	YGGCCR	2 cut(s)	201, 256
Eam1104I	CTCTTC	8 cut(s)	432, 786, 1257, 1302, 1311, 1353, 1934, 2130
Eam1105I	GACNNNNNGTC	1 cut(s)	2260
EarI	CTCTTC	8 cut(s)	432, 786, 1257, 1302, 1311, 1353, 1934, 2130
Eco105I	TACGTA	1 cut(s)	780
Eco130I	CCWWGG	2 cut(s)	240, 2172
Eco31I	GGTCTC	1 cut(s)	516
Eco47I	GGWCC	2 cut(s)	1514, 2010
Eco47III	AGCGCT	1 cut(s)	1737
Eco57I	CTGAAG	6 cut(s)	645, 810, 939, 1377, 1830, 2043
EcoO109I	RGGNCCY	1 cut(s)	1514
EcoRI	GAATTC	2 cut(s)	132, 138
EcoRII	CCWGG	2 cut(s)	610, 1056
EcoT14I	CCWWGG	2 cut(s)	240, 2172
EgeI	GGCGCC	1 cut(s)	193
EheI	GGCGCC	1 cut(s)	193
ErhI	CCWWGG	2 cut(s)	240, 2172
Esp3I	CGTCTC	1 cut(s)	1423
FaeI	CATG	8 cut(s)	33, 374, 469, 759, 1633, 1702, 1901, 2283
FalI	AAGNNNNNCTT	2 cut(s)	752, 784
FaqI	GGGAC	4 cut(s)	417, 1074, 1527, 2033
FatI	CATG	8 cut(s)	29, 370, 465, 755, 1629, 1698, 1897, 2279
FokI	GGATG	5 cut(s)	683, 1307, 1406, 2090, 2131
FspBI	CTAG	4 cut(s)	818, 1112, 1748, 1830
GlaI	GCGC	4 cut(s)	121, 193, 1425, 1737
GsaI	CCCAGC	1 cut(s)	1449
GsuI	CTGGAG	1 cut(s)	38
HaeII	RGCGCY	2 cut(s)	195, 1739
HaeIII	GGCC	4 cut(s)	203, 258, 359, 615
HapII	CCGG	1 cut(s)	327
HgaI	GACGC	3 cut(s)	133, 1440, 2264
HhaI	GCGC	4 cut(s)	122, 194, 1426, 1738
Hin1I	GRCGYC	1 cut(s)	192
Hin1II	CATG	8 cut(s)	33, 374, 469, 759, 1633, 1702, 1901, 2283
Hin6I	GCGC	4 cut(s)	120, 192, 1424, 1736
HinP1I	GCGC	4 cut(s)	120, 192, 1424, 1736
HincII	GTYRAC	1 cut(s)	2265
HindII	GTYRAC	1 cut(s)	2265
HindIII	AAGCTT	1 cut(s)	1400
HpaII	CCGG	1 cut(s)	327
HphI	GGTGA	1 cut(s)	1958
Hpy166II	GTNNAC	2 cut(s)	809, 2265
Hpy188I	TCNGA	7 cut(s)	501, 525, 855, 966, 1474, 1905, 2227
Hpy8I	GTNNAC	2 cut(s)	809, 2265
Hpy99I	CGWCG	3 cut(s)	25, 28, 120
HpyAV	CCTTC	8 cut(s)	324, 626, 1306, 1373, 1435, 1836, 2067, 2068
HpyCH4III	ACNGT	6 cut(s)	215, 231, 302, 352, 601, 824
HpyCH4IV	ACGT	5 cut(s)	115, 699, 779, 996, 1957
HpyF3I	CTNAG	8 cut(s)	498, 708, 963, 1071, 1102, 1547, 2224, 2239
HpySE526I	ACGT	5 cut(s)	115, 699, 779, 996, 1957
Hsp92I	GRCGYC	1 cut(s)	192
Hsp92II	CATG	8 cut(s)	33, 374, 469, 759, 1633, 1702, 1901, 2283
HspAI	GCGC	4 cut(s)	120, 192, 1424, 1736
KasI	GGCGCC	1 cut(s)	191
Kpn2I	TCCGGA	1 cut(s)	326
Kzo9I	GATC	8 cut(s)	421, 560, 678, 847, 868, 966, 1771, 1832
LguI	GCTCTTC	1 cut(s)	1257
LmnI	GCTCC	2 cut(s)	1276, 1661
LweI	GCATC	5 cut(s)	253, 1363, 1528, 1675, 2218
MaeI	CTAG	4 cut(s)	818, 1112, 1748, 1830
MaeII	ACGT	5 cut(s)	115, 699, 779, 996, 1957
MaeIII	GTNAC	3 cut(s)	145, 538, 1743
MalI	GATC	8 cut(s)	423, 562, 680, 849, 870, 968, 1773, 1834
MboI	GATC	8 cut(s)	421, 560, 678, 847, 868, 966, 1771, 1832
MflI	RGATCY	3 cut(s)	560, 847, 1832
MhlI	GDGCHC	1 cut(s)	1666
MlsI	TGGCCA	1 cut(s)	258
MluNI	TGGCCA	1 cut(s)	258
Mly113I	GGCGCC	1 cut(s)	192
MlyI	GAGTC	5 cut(s)	185, 490, 546, 546, 587
MmeI	TCCRAC	2 cut(s)	631, 1933
Mox20I	TGGCCA	1 cut(s)	258
MroI	TCCGGA	1 cut(s)	326
MroXI	GAANNNNTTC	1 cut(s)	1815
MscI	TGGCCA	1 cut(s)	258
MseI	TTAA	7 cut(s)	270, 660, 704, 717, 927, 1188, 1494
MslI	CAYNNNNRTG	2 cut(s)	636, 1841
Msp20I	TGGCCA	1 cut(s)	258
MspA1I	CMGCKG	3 cut(s)	164, 881, 2243
MspI	CCGG	1 cut(s)	327
MspR9I	CCNGG	2 cut(s)	612, 1058
Mva1269I	GAATGC	3 cut(s)	126, 1719, 1726
MvaI	CCWGG	2 cut(s)	612, 1058
MvnI	CGCG	3 cut(s)	120, 144, 873
NarI	GGCGCC	1 cut(s)	192
NdeII	GATC	8 cut(s)	421, 560, 678, 847, 868, 966, 1771, 1832
NlaIII	CATG	8 cut(s)	33, 374, 469, 759, 1633, 1702, 1901, 2283
NlaIV	GGNNCC	3 cut(s)	193, 595, 1515
NmuCI	GTSAC	2 cut(s)	145, 538
NspI	RCATGY	1 cut(s)	374
NspV	TTCGAA	2 cut(s)	130, 136
PaeI	GCATGC	1 cut(s)	374
PciSI	GCTCTTC	1 cut(s)	1257
PctI	GAATGC	3 cut(s)	126, 1719, 1726
PdmI	GAANNNNTTC	1 cut(s)	1815
PfeI	GAWTC	5 cut(s)	476, 526, 1253, 1802, 2083
PleI	GAGTC	5 cut(s)	184, 490, 545, 546, 586
PluTI	GGCGCC	1 cut(s)	195
PpsI	GAGTC	5 cut(s)	184, 490, 545, 546, 586
Ppu21I	YACGTR	1 cut(s)	780
PpuMI	RGGWCCY	1 cut(s)	1514
PshBI	ATTAAT	2 cut(s)	660, 1188
PsiI	TTATAA	1 cut(s)	1004
Psp5II	RGGWCCY	1 cut(s)	1514
Psp6I	CCWGG	2 cut(s)	610, 1056
PspFI	CCCAGC	1 cut(s)	1445
PspGI	CCWGG	2 cut(s)	610, 1056
PspN4I	GGNNCC	3 cut(s)	193, 595, 1515
PspPI	GGNCC	3 cut(s)	358, 1514, 2010
PspPPI	RGGWCCY	1 cut(s)	1514
PsrI	GAACNNNNNNTAC	2 cut(s)	1152, 1184
PstI	CTGCAG	1 cut(s)	160
PstNI	CAGNNNCTG	2 cut(s)	164, 2231
PsuI	RGATCY	3 cut(s)	560, 847, 1832
PvuII	CAGCTG	3 cut(s)	164, 881, 2243
RsaI	GTAC	1 cut(s)	916
RsaNI	GTAC	1 cut(s)	915
RseI	CAYNNNNRTG	2 cut(s)	636, 1841
SapI	GCTCTTC	1 cut(s)	1257
SaqAI	TTAA	7 cut(s)	270, 660, 704, 717, 927, 1188, 1494
Sau3AI	GATC	8 cut(s)	421, 560, 678, 847, 868, 966, 1771, 1832
Sau96I	GGNCC	3 cut(s)	358, 1514, 2010
ScaI	AGTACT	1 cut(s)	916
SchI	GAGTC	5 cut(s)	185, 490, 546, 546, 587
ScrFI	CCNGG	2 cut(s)	612, 1058
SduI	GDGCHC	1 cut(s)	1666
SfaNI	GCATC	5 cut(s)	253, 1363, 1528, 1675, 2218
SfcI	CTRYAG	3 cut(s)	156, 294, 1155
SfoI	GGCGCC	1 cut(s)	193
SfuI	TTCGAA	2 cut(s)	130, 136
SinI	GGWCC	2 cut(s)	1514, 2010
SmiMI	CAYNNNNRTG	2 cut(s)	636, 1841
SmlI	CTYRAG	7 cut(s)	838, 1019, 1593, 1739, 1859, 2087, 2193
SmoI	CTYRAG	7 cut(s)	838, 1019, 1593, 1739, 1859, 2087, 2193
SnaBI	TACGTA	1 cut(s)	780
SphI	GCATGC	1 cut(s)	374
SsiI	CCGC	3 cut(s)	200, 1220, 1889
SspDI	GGCGCC	1 cut(s)	191
SspI	AATATT	1 cut(s)	721
SspMI	CTAG	4 cut(s)	818, 1112, 1748, 1830
StyD4I	CCNGG	2 cut(s)	610, 1056
StyI	CCWWGG	2 cut(s)	240, 2172
TaaI	ACNGT	6 cut(s)	215, 231, 302, 352, 601, 824
TaiI	ACGT	5 cut(s)	118, 702, 782, 999, 1960
TaqI	TCGA	4 cut(s)	130, 136, 1486, 2136
TatI	WGTACW	1 cut(s)	914
TauI	GCSGC	1 cut(s)	203
TfiI	GAWTC	5 cut(s)	476, 526, 1253, 1802, 2083
Tru1I	TTAA	7 cut(s)	270, 660, 704, 717, 927, 1188, 1494
Tru9I	TTAA	7 cut(s)	270, 660, 704, 717, 927, 1188, 1494
TscAI	CASTG	4 cut(s)	604, 1671, 1710, 2146
TseFI	GTSAC	2 cut(s)	145, 538
Tsp45I	GTSAC	2 cut(s)	145, 538
TspDTI	ATGAA	4 cut(s)	669, 1320, 1338, 1347
TspGWI	ACGGA	4 cut(s)	237, 571, 1666, 1784
TspRI	CASTG	4 cut(s)	604, 1671, 1710, 2146
VpaK11BI	GGWCC	2 cut(s)	1514, 2010
VspI	ATTAAT	2 cut(s)	660, 1188
XapI	RAATTY	6 cut(s)	132, 138, 470, 899, 950, 2150
XbaI	TCTAGA	2 cut(s)	1111, 1829
XceI	RCATGY	1 cut(s)	374
XcmI	CCANNNNNNNNNTGG	1 cut(s)	352
XmnI	GAANNNNTTC	1 cut(s)	1815
XspI	CTAG	4 cut(s)	818, 1112, 1748, 1830
ZrmI	AGTACT	1 cut(s)	916

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.