Rw2G036120

Protein BIG GRAIN 1-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Forward (+)
59242578 .. 59244294
1717 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G036120.1

Sequence Viewer

Length: 1173 bp
ATGGAGAGGTGGGATCACAAATCACAACGAGAAGCTCGACACAGTAAACACCGTAGAGAAAACCCTTCTTTCTCTTCGTCTCTGCTGGACTCTATTTACCGCTCAATCGACGAAGGCGAACAGATTGGAGCTCGGAGAGAAGGAGAGCTCATATTTTACAAGGAATCCATGAGGAAGAAACAGAGCGGTAGTGTTTCTTCTAATGGCGTCAAAGCAGAGGAGGAGATCATGAGTCTCCGGCGAGCCTGCTTGATAGAGAAATGGATGGAGAAGAAAGCTGCGGTGGCTGACAAAGTCGTGGTTCGAAGAAATTCAATGGCGGATTTCGACAGGAGGTTCTTGAATTCGAGCTCCAGCTCTTCGGATTCGAGTTGCGGAGGTGGGTTTTCTTCGTCGGAGTCAGACTCCATGTACGGGTCGAGATCGAGGTCCTCATCTTCATGCTACAGCATGCCGAGGCCCATCCGGACCAGCCTCTCATCGTCCCGACCTGAAACCCATCAGAAGCCGAAGCAAGAAAACGGGTTCGTGAAGACGAAATCCAAGGCGTTGAAGATTTACGGCGACTTGAAGAAAGTGAAGCAGCCAATCTCACCGGGTGGAAAACTCGCCAGTTTTCTCAATTCCATTTTCAACAGCGGAAACGGAAAGAAGCACAAGATTAACATCGACGACTTGGGTTCCGACAGGAACTCGAAATCGACAAACGGGTCGAACTGTTCTTCTGCTTCTTCGTTTTCAAGGTCCTGTTTGCGCAAAACTTCTGTTTCTAGAGGTGAACTCAGCAATGGCGGTGGTGACAGTGCGAAAAGGTCAGTGAGGTTTTATCCGGTGAGCGTGATCGTGGACGAGGACTGCCGGCCGTGCGGGCACAAAACTCTTGAAGAGATGAAGAGGAGTTCTGCACTTGACTGTTTTGTTATGGATGAAGATGATCATCGTCGCCAAGTTGAGGAAGTAGCCAGAAGCTACTTGATGAAGAACTACCAGAAGAAGACTCATGATGAGGAAATGGATGAGGATGAGGACGATGATGCAGCGAGCTATGCAAGTTCTGATCTGTTCGAGTTGGACACTGTTGGAGTTGAAGAAAGGTACCGTGAAGAATTACCGGTGTATGAAACTACGTATCTCGACAGAAATCGAGCCATTGCTAATGGTTTGATTTTGTAA

Protein Analysis

390

Amino Acids

43.89

Weight (kDa)

8.61

Isoelectric Point (pI)

72.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013871)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G54200 AT3G13980
fragaria_vesca FvH4_6g34500
malus_domestica MD09G1185600.v1.1 MD17G1170300.v1.1
prunus_persica Prupe.3G043400_v2.0.a1
pyrus_communis pycom09g10290 pycom12419g00180
rosa_chinensis RchiOBHm_Chr2g0144811
rosa_laevigata RLG00000020115
rosa_multiflora Rmu_sc0002354.1_g000024
rosa_roxburghii Rroxscaffold_2G00100950
rosa_rugosa Rorug02G0390000
rosa_samantha Rh2AG441700 Rh2BG452300 Rh2DG462100
rosa_wichuraiana Rw2G036120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 709
Acc16I TGCGCA 1 cut(s) 755
Acc65I GGTACC 1 cut(s) 1095
AccB1I GGYRCC 1 cut(s) 1095
AccBSI CCGCTC 2 cut(s) 102, 186
AccIII TCCGGA 1 cut(s) 465
AciI CCGC 8 cut(s) 100, 186, 281, 320, 375, 639, 792, 867
AclWI GGATC 1 cut(s) 21
AcoI YGGCCR 1 cut(s) 860
AcsI RAATTY 2 cut(s) 310, 343
AcyI GRCGYC 1 cut(s) 207
AdeI CACNNNGTG 1 cut(s) 599
AfaI GTAC 2 cut(s) 413, 1097
AfiI CCNNNNNNNGG 2 cut(s) 414, 952
AgeI ACCGGT 1 cut(s) 1111
AgsI TTSAA 8 cut(s) 315, 343, 553, 571, 634, 741, 884, 1088
AluBI AGCT 8 cut(s) 35, 131, 148, 278, 351, 357, 969, 1044
AluI AGCT 8 cut(s) 35, 131, 148, 278, 351, 357, 969, 1044
Alw21I GWGCWC 3 cut(s) 133, 150, 353
Alw26I GTCTC 2 cut(s) 84, 239
AlwI GGATC 1 cut(s) 21
Aor13HI TCCGGA 1 cut(s) 465
AoxI GGCC 2 cut(s) 458, 860
ApeKI GCWGC 3 cut(s) 278, 583, 1037
ApoI RAATTY 2 cut(s) 310, 343
AsiGI ACCGGT 1 cut(s) 1111
Asp700I GAANNNNTTC 1 cut(s) 310
Asp718I GGTACC 1 cut(s) 1095
AspLEI GCGC 1 cut(s) 756
AspS9I GGNCC 4 cut(s) 429, 459, 468, 744
AsuC2I CCSGG 1 cut(s) 597
AsuHPI GGTGA 4 cut(s) 585, 788, 809, 844
AsuII TTCGAA 1 cut(s) 304
AvaII GGWCC 3 cut(s) 429, 468, 744
BaeGI GKGCMC 1 cut(s) 873
BanI GGYRCC 1 cut(s) 1095
BanII GRGCYC 3 cut(s) 133, 150, 353
BarI GAAGNNNNNNTAC 2 cut(s) 181, 213
BbsI GAAGAC 2 cut(s) 539, 1001
Bbv12I GWGCWC 3 cut(s) 133, 150, 353
BbvI GCAGC 3 cut(s) 265, 595, 1049
BccI CCATC 3 cut(s) 259, 470, 507
BceAI ACGGC 2 cut(s) 577, 847
BclI TGATCA 1 cut(s) 934
BcnI CCSGG 1 cut(s) 597
BcoDI GTCTC 2 cut(s) 84, 239
BfaI CTAG 1 cut(s) 771
BfmI CTRYAG 1 cut(s) 445
BglI GCCNNNNNGGC 1 cut(s) 868
BisI GCNGC 3 cut(s) 279, 584, 1038
BlsI GCNGC 3 cut(s) 280, 585, 1039
Bme1390I CCNGG 1 cut(s) 597
Bme18I GGWCC 3 cut(s) 429, 468, 744
BmgT120I GGNCC 4 cut(s) 429, 459, 468, 744
BmiI GGNNCC 2 cut(s) 682, 1097
BmrFI CCNGG 1 cut(s) 597
BmsI GCATC 1 cut(s) 1024
BpiI GAAGAC 2 cut(s) 539, 1001
BplI GAGNNNNNCTC 4 cut(s) 389, 421, 765, 797
BpmI CTGGAG 1 cut(s) 337
Bpu14I TTCGAA 1 cut(s) 304
BpuMI CCSGG 1 cut(s) 597
BsaAI YACGTR 1 cut(s) 1128
BsaBI GATNNNNATC 2 cut(s) 665, 936
BsaHI GRCGYC 1 cut(s) 207
BsaJI CCNNGG 2 cut(s) 455, 543
BsaWI WCCGGW 3 cut(s) 465, 829, 1111
Bsc4I CCNNNNNNNGG 2 cut(s) 414, 952
Bse118I RCCGGY 2 cut(s) 858, 1111
Bse1I ACTGG 1 cut(s) 612
Bse3DI GCAATG 2 cut(s) 793, 1149
Bse8I GATNNNNATC 2 cut(s) 665, 936
BseAI TCCGGA 1 cut(s) 465
BseDI CCNNGG 2 cut(s) 455, 543
BseGI GGATG 5 cut(s) 270, 462, 931, 1021, 1027
BseJI GATNNNNATC 2 cut(s) 665, 936
BseLI CCNNNNNNNGG 2 cut(s) 414, 952
BseMI GCAATG 2 cut(s) 793, 1149
BseMII CTCAG 1 cut(s) 796
BseNI ACTGG 1 cut(s) 612
BseRI GAGGAG 3 cut(s) 233, 236, 910
BseSI GKGCMC 1 cut(s) 873
BseX3I CGGCCG 1 cut(s) 860
BseXI GCAGC 3 cut(s) 265, 595, 1049
BsgI GTGCAG 1 cut(s) 888
Bsh1285I CGRYCG 1 cut(s) 863
BshFI GGCC 2 cut(s) 460, 862
BshNI GGYRCC 1 cut(s) 1095
BshTI ACCGGT 1 cut(s) 1111
BsiEI CGRYCG 1 cut(s) 863
BsiHKAI GWGCWC 3 cut(s) 133, 150, 353
BsiSI CCGG 6 cut(s) 238, 466, 596, 830, 859, 1112
BslFI GGGAC 1 cut(s) 469
BslI CCNNNNNNNGG 2 cut(s) 414, 952
BsmAI GTCTC 2 cut(s) 84, 239
BsmBI CGTCTC 1 cut(s) 84
BsmFI GGGAC 1 cut(s) 469
BsnI GGCC 2 cut(s) 460, 862
Bsp119I TTCGAA 1 cut(s) 304
Bsp1286I GDGCHC 4 cut(s) 133, 150, 353, 873
Bsp13I TCCGGA 1 cut(s) 465
Bsp143I GATC 6 cut(s) 13, 225, 422, 840, 934, 1057
BspACI CCGC 8 cut(s) 100, 186, 281, 320, 375, 639, 792, 867
BspANI GGCC 2 cut(s) 460, 862
BspCNI CTCAG 1 cut(s) 795
BspEI TCCGGA 1 cut(s) 465
BspHI TCATGA 2 cut(s) 228, 1000
BspLI GGNNCC 2 cut(s) 682, 1097
BspPI GGATC 1 cut(s) 21
BspQI GCTCTTC 1 cut(s) 364
BspT104I TTCGAA 1 cut(s) 304
BspT107I GGYRCC 1 cut(s) 1095
BsrBI CCGCTC 2 cut(s) 102, 186
BsrDI GCAATG 2 cut(s) 793, 1149
BsrFI RCCGGY 2 cut(s) 858, 1111
BsrI ACTGG 1 cut(s) 612
BssAI RCCGGY 2 cut(s) 858, 1111
BssECI CCNNGG 2 cut(s) 455, 543
BssMI GATC 6 cut(s) 13, 225, 422, 840, 934, 1057
BssNI GRCGYC 1 cut(s) 207
BssT1I CCWWGG 1 cut(s) 543
Bst4CI ACNGT 7 cut(s) 44, 53, 719, 803, 914, 1078, 1100
Bst6I CTCTTC 4 cut(s) 79, 364, 879, 887
BstACI GRCGYC 1 cut(s) 207
BstBAI YACGTR 1 cut(s) 1128
BstBI TTCGAA 1 cut(s) 304
BstC8I GCNNGC 6 cut(s) 243, 247, 452, 860, 869, 1042
BstDEI CTNAG 1 cut(s) 782
BstF5I GGATG 5 cut(s) 270, 462, 931, 1021, 1027
BstHHI GCGC 1 cut(s) 756
BstKTI GATC 6 cut(s) 16, 228, 425, 843, 937, 1060
BstMAI GTCTC 2 cut(s) 84, 239
BstMBI GATC 6 cut(s) 13, 225, 422, 840, 934, 1057
BstMCI CGRYCG 1 cut(s) 863
BstMWI GCNNNNNNNGC 4 cut(s) 284, 864, 868, 1046
BstNSI RCATGY 1 cut(s) 454
BstSCI CCNGG 1 cut(s) 595
BstSFI CTRYAG 1 cut(s) 445
BstSLI GKGCMC 1 cut(s) 873
BstSNI TACGTA 1 cut(s) 1128
BstV1I GCAGC 3 cut(s) 265, 595, 1049
BstV2I GAAGAC 2 cut(s) 539, 1001
BstZI CGGCCG 1 cut(s) 860
BsuRI GGCC 2 cut(s) 460, 862
BtsCI GGATG 5 cut(s) 270, 462, 931, 1021, 1027
BtsIMutI CAGTG 3 cut(s) 808, 822, 1074
Cac8I GCNNGC 6 cut(s) 243, 247, 452, 860, 869, 1042
CciI TCATGA 2 cut(s) 228, 1000
CfoI GCGC 1 cut(s) 756
Cfr10I RCCGGY 2 cut(s) 858, 1111
Cfr13I GGNCC 4 cut(s) 429, 459, 468, 744
CseI GACGC 1 cut(s) 196
Csp6I GTAC 2 cut(s) 412, 1096
CspAI ACCGGT 1 cut(s) 1111
CspCI CAANNNNNGTGG 2 cut(s) 775, 810
CviAII CATG 6 cut(s) 169, 229, 409, 441, 451, 1001
CviQI GTAC 2 cut(s) 412, 1096
DdeI CTNAG 1 cut(s) 782
DpnI GATC 6 cut(s) 15, 227, 424, 842, 936, 1059
DpnII GATC 6 cut(s) 13, 225, 422, 840, 934, 1057
DraIII CACNNNGTG 1 cut(s) 599
DrdI GACNNNNNNGTC 1 cut(s) 709
DseDI GACNNNNNNGTC 1 cut(s) 709
EaeI YGGCCR 1 cut(s) 860
EagI CGGCCG 1 cut(s) 860
Eam1104I CTCTTC 4 cut(s) 79, 364, 879, 887
EarI CTCTTC 4 cut(s) 79, 364, 879, 887
EciI GGCGGA 1 cut(s) 335
Ecl136II GAGCTC 3 cut(s) 131, 148, 351
EclXI CGGCCG 1 cut(s) 860
Eco105I TACGTA 1 cut(s) 1128
Eco130I CCWWGG 1 cut(s) 543
Eco24I GRGCYC 3 cut(s) 133, 150, 353
Eco47I GGWCC 3 cut(s) 429, 468, 744
Eco52I CGGCCG 1 cut(s) 860
Eco53kI GAGCTC 3 cut(s) 131, 148, 351
EcoICRI GAGCTC 3 cut(s) 131, 148, 351
EcoO109I RGGNCCY 2 cut(s) 429, 744
EcoRI GAATTC 1 cut(s) 343
EcoT14I CCWWGG 1 cut(s) 543
EcoT38I GRGCYC 3 cut(s) 133, 150, 353
ErhI CCWWGG 1 cut(s) 543
Esp3I CGTCTC 1 cut(s) 84
FaeI CATG 6 cut(s) 172, 232, 412, 444, 454, 1004
FaqI GGGAC 1 cut(s) 469
FatI CATG 6 cut(s) 168, 228, 408, 440, 450, 1000
FauI CCCGC 1 cut(s) 860
FbaI TGATCA 1 cut(s) 934
Fnu4HI GCNGC 3 cut(s) 279, 584, 1038
FokI GGATG 5 cut(s) 277, 449, 938, 1028, 1034
FriOI GRGCYC 3 cut(s) 133, 150, 353
Fsp4HI GCNGC 3 cut(s) 279, 584, 1038
FspBI CTAG 1 cut(s) 771
FspI TGCGCA 1 cut(s) 755
GlaI GCGC 1 cut(s) 755
GluI GCNGC 3 cut(s) 279, 584, 1038
GsuI CTGGAG 1 cut(s) 337
HaeIII GGCC 2 cut(s) 460, 862
HapII CCGG 6 cut(s) 238, 466, 596, 830, 859, 1112
HgaI GACGC 1 cut(s) 196
HhaI GCGC 1 cut(s) 756
Hin1I GRCGYC 1 cut(s) 207
Hin1II CATG 6 cut(s) 172, 232, 412, 444, 454, 1004
Hin6I GCGC 1 cut(s) 754
HinP1I GCGC 1 cut(s) 754
HinfI GANTC 7 cut(s) 89, 164, 232, 365, 398, 404, 997
HpaII CCGG 6 cut(s) 238, 466, 596, 830, 859, 1112
HphI GGTGA 4 cut(s) 585, 788, 809, 844
Hpy166II GTNNAC 3 cut(s) 47, 779, 847
Hpy188I TCNGA 7 cut(s) 135, 364, 397, 403, 504, 685, 1057
Hpy8I GTNNAC 3 cut(s) 47, 779, 847
Hpy99I CGWCG 4 cut(s) 113, 397, 674, 945
HpyAV CCTTC 3 cut(s) 75, 107, 134
HpyCH4III ACNGT 7 cut(s) 44, 53, 719, 803, 914, 1078, 1100
HpyCH4IV ACGT 1 cut(s) 1127
HpyCH4V TGCA 3 cut(s) 905, 1037, 1049
HpyF10VI GCNNNNNNNGC 4 cut(s) 284, 864, 868, 1046
HpyF3I CTNAG 1 cut(s) 782
HpySE526I ACGT 1 cut(s) 1127
Hsp92I GRCGYC 1 cut(s) 207
Hsp92II CATG 6 cut(s) 172, 232, 412, 444, 454, 1004
HspAI GCGC 1 cut(s) 754
Kpn2I TCCGGA 1 cut(s) 465
KpnI GGTACC 1 cut(s) 1099
KroI GCCGGC 1 cut(s) 858
KroNI GCCGGC 1 cut(s) 860
Ksp22I TGATCA 1 cut(s) 934
Kzo9I GATC 6 cut(s) 13, 225, 422, 840, 934, 1057
LguI GCTCTTC 1 cut(s) 364
LmnI GCTCC 2 cut(s) 128, 356
Lsp1109I GCAGC 3 cut(s) 265, 595, 1049
LweI GCATC 1 cut(s) 1024
MaeI CTAG 1 cut(s) 771
MaeII ACGT 1 cut(s) 1127
MaeIII GTNAC 1 cut(s) 797
MalI GATC 6 cut(s) 15, 227, 424, 842, 936, 1059
MbiI CCGCTC 2 cut(s) 102, 186
MboI GATC 6 cut(s) 13, 225, 422, 840, 934, 1057
MhlI GDGCHC 4 cut(s) 133, 150, 353, 873
MluCI AATT 4 cut(s) 310, 343, 622, 1106
MlyI GAGTC 5 cut(s) 83, 241, 398, 407, 991
MmeI TCCRAC 4 cut(s) 375, 708, 1050, 1060
MroI TCCGGA 1 cut(s) 465
MroNI GCCGGC 1 cut(s) 858
MroXI GAANNNNTTC 1 cut(s) 310
MseI TTAA 1 cut(s) 663
MslI CAYNNNNRTG 1 cut(s) 439
MspA1I CMGCKG 1 cut(s) 639
MspI CCGG 6 cut(s) 238, 466, 596, 830, 859, 1112
MspR9I CCNGG 1 cut(s) 597
MwoI GCNNNNNNNGC 4 cut(s) 284, 864, 868, 1046
NaeI GCCGGC 1 cut(s) 860
NciI CCSGG 1 cut(s) 597
NdeII GATC 6 cut(s) 13, 225, 422, 840, 934, 1057
NgoMIV GCCGGC 1 cut(s) 858
NlaIII CATG 6 cut(s) 172, 232, 412, 444, 454, 1004
NlaIV GGNNCC 2 cut(s) 682, 1097
NmeAIII GCCGAG 1 cut(s) 480
NmuCI GTSAC 1 cut(s) 797
NsbI TGCGCA 1 cut(s) 755
NspI RCATGY 1 cut(s) 454
NspV TTCGAA 1 cut(s) 304
PaeI GCATGC 1 cut(s) 454
PagI TCATGA 2 cut(s) 228, 1000
PciSI GCTCTTC 1 cut(s) 364
PcsI WCGNNNNNNNCGW 2 cut(s) 34, 114
PdiI GCCGGC 1 cut(s) 860
PdmI GAANNNNTTC 1 cut(s) 310
PfeI GAWTC 2 cut(s) 164, 365
PflFI GACNNNGTC 1 cut(s) 293
PinAI ACCGGT 1 cut(s) 1111
PkrI GCNGC 3 cut(s) 280, 585, 1039
PleI GAGTC 5 cut(s) 83, 240, 398, 406, 991
PpsI GAGTC 5 cut(s) 83, 240, 398, 406, 991
Ppu21I YACGTR 1 cut(s) 1128
PpuMI RGGWCCY 2 cut(s) 429, 744
Psp124BI GAGCTC 3 cut(s) 133, 150, 353
Psp5II RGGWCCY 2 cut(s) 429, 744
PspN4I GGNNCC 2 cut(s) 682, 1097
PspPI GGNCC 4 cut(s) 429, 459, 468, 744
PspPPI RGGWCCY 2 cut(s) 429, 744
PsyI GACNNNGTC 1 cut(s) 293
RsaI GTAC 2 cut(s) 413, 1097
RsaNI GTAC 2 cut(s) 412, 1096
RseI CAYNNNNRTG 1 cut(s) 439
SacI GAGCTC 3 cut(s) 133, 150, 353
SapI GCTCTTC 1 cut(s) 364
SaqAI TTAA 1 cut(s) 663
SatI GCNGC 3 cut(s) 279, 584, 1038
Sau3AI GATC 6 cut(s) 13, 225, 422, 840, 934, 1057
Sau96I GGNCC 4 cut(s) 429, 459, 468, 744
SchI GAGTC 5 cut(s) 83, 241, 398, 407, 991
ScrFI CCNGG 1 cut(s) 597
SduI GDGCHC 4 cut(s) 133, 150, 353, 873
SfaNI GCATC 1 cut(s) 1024
SfcI CTRYAG 1 cut(s) 445
SfuI TTCGAA 1 cut(s) 304
SinI GGWCC 3 cut(s) 429, 468, 744
SmiMI CAYNNNNRTG 1 cut(s) 439
SnaBI TACGTA 1 cut(s) 1128
SphI GCATGC 1 cut(s) 454
Sse9I AATT 4 cut(s) 310, 343, 622, 1106
SsiI CCGC 8 cut(s) 100, 186, 281, 320, 375, 639, 792, 867
SspMI CTAG 1 cut(s) 771
SstI GAGCTC 3 cut(s) 133, 150, 353
StyD4I CCNGG 1 cut(s) 595
StyI CCWWGG 1 cut(s) 543
TaaI ACNGT 7 cut(s) 44, 53, 719, 803, 914, 1078, 1100
TaiI ACGT 1 cut(s) 1130
TasI AATT 4 cut(s) 310, 343, 622, 1106
TfiI GAWTC 2 cut(s) 164, 365
Tru1I TTAA 1 cut(s) 663
Tru9I TTAA 1 cut(s) 663
TscAI CASTG 3 cut(s) 808, 822, 1081
TseFI GTSAC 1 cut(s) 797
TseI GCWGC 3 cut(s) 278, 583, 1037
Tsp45I GTSAC 1 cut(s) 797
TspDTI ATGAA 5 cut(s) 429, 905, 942, 992, 1134
TspGWI ACGGA 1 cut(s) 660
TspRI CASTG 3 cut(s) 808, 822, 1081
Tth111I GACNNNGTC 1 cut(s) 293
VpaK11BI GGWCC 3 cut(s) 429, 468, 744
XapI RAATTY 2 cut(s) 310, 343
XbaI TCTAGA 1 cut(s) 770
XceI RCATGY 1 cut(s) 454
XmnI GAANNNNTTC 1 cut(s) 310
XspI CTAG 1 cut(s) 771
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.