Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0000443

Physical Location & Seq

Genomic Coordinates Reverse (-)

49845213 .. 49851045

Gene Structure 5833 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0390000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1581 bp

ATGGTGGGTCCGACGCTGGTGGGTCTGCAAGACCACCTGAAGCTGGCGAGAGAGTACGCGATGGAAGGGCTCTACGACACCTCCATGATCTTCTTCGACGGCGGCATTGCTCAGATCAACAAGCACTTAAACACGCTTGATGACCCGTTGATCCGCTCAAAATGGATGAATGTAAAGAAGGCACTTTCCGAGGAAGCAGAGGTTGTGAAACAACTAGATGCCGAGAGAAGGGCATTTAAGGAAAGCCCCATGGGCCGGCGCCCTTCCTCGCCTCCAATTCATGCTAAGTCATCCTTCGTTTTTCAACCCTTAGATGAATACCCAACTTCTTCAGGATATCCAACTTCTTCAGGTTCGCCTATGGATGATCCTGATGTGTGGAGGCCACCAAGTAGGGACACTTCAAATAGAAGAAATGCAAAGGCTGGTCAGGTTGGTATGAGGAAGTCACCACAAGATGGAAATTGGGCTCGGAGTTCTGCAACAAAAGCAGGCACACCTGGCCGTGGTGCAAAGGCCGGTGGATCAAGTAGGGCTAACTCAGCGGTCCGGTCTTCTACTCCCGGCAAGAAAGACACCCGATCTGGAAAATCTAGCAAGGCAGATTCAGCGAATGGTGATGCTGAGGATGGAAAGCCAAAGAGGCAGTATGAGGGACCTGATCCTGATTTGGCTGAAATGCTTGAAAGGGATGTACTGGAAACCAGTCCTGGAGTGAGATGGGATGATGTTGCTGGCCTGACTGAAGCAAAAAGACTTCTGGAGGAAGCCGTTGTTCTTCCTTTGTGGATGCCAGAATATTTTCAGGGGATCAGGAGACCATGGAAGGGTGTTCTTATGTTTGGTCCTCCTGGAACTGGAAAGACATTACTTGCTAAAGCTGTTGCTACTGAGTGTGGCACAACTTTTTTCAATGTCTCCTCTGCTACATTAGCTTCAAAGTGGCGTGGAGAAAGTGAACGAATGGTTCGGTGCTTATTTGATCTTGCAAGAGCTTATGCGCCGAGTACAATCTTCATAGATGAAATTGATTCTCTCTGCAATTCCCGGGGGGCATCAGGAGAGCATGAGTCCTCCAGAAGGGTGAAATCTGAACTTCTGGTCCAGGTTGATGGTGTAAATGCCACTTCCACAAATGAAGATGGTACTCGTAAAATAGTGATGGTTCTGGCAGCTACTAACTTTCCATGGGACATTGATGAGGCACTCAGGAGGAGACTGGAGAAGCGTATTTATATCCCTCTTCCAAATTTTGAGAGCCGTAAAGAGCTTATTCGGATAAATTTGAAAACAGTTGAGGTTGCTCAAGATGTAAACATTGATGATGTGGCTCGCCGAACAGATGGATATAGTGGTGACGATCTCACAAACGTTTGCCGTGATGCTTCCTTGAATGGGATGAGGAGGAAAATAGCTGGAAAGACACGTGATGAGATCAAGAGCATGTCGAAGGATGAGATTTCAAAGGATCCTGTTGCCATGTGTGATTTTGAAGAAGCCTTGGTGAAGGTCCAACGGAGTGTTTCTCAATCTGATATTGAACGGCATGAAAAATGGTTTTCAGAGTTTGGGTCAGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005774 GO:0005777 GO:0005829 GO:0005840 GO:0005911 GO:0006082 GO:0006790 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009056 GO:0009266 GO:0009409 GO:0009505 GO:0009506 GO:0009507 GO:0009526 GO:0009536 GO:0009605 GO:0009607 GO:0009617 GO:0009625 GO:0009628 GO:0009941 GO:0009987 GO:0016020 GO:0016143 GO:0016145 GO:0019748 GO:0019757 GO:0019759 GO:0019760 GO:0019762 GO:0022626 GO:0030054 GO:0030312 GO:0031090 GO:0031967 GO:0031975 GO:0032991 GO:0042579 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043436 GO:0044237 GO:0044248 GO:0044273 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0048046 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0071704 GO:0071944 GO:0098542 GO:0098588 GO:0098805 GO:1901135 GO:1901136 GO:1901564 GO:1901565 GO:1901575 GO:1901657 GO:1901658 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lipase_GDSL

Protein Analysis

526

Amino Acids

58.17

Weight (kDa)

8.1

Isoelectric Point (pI)

53.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KATNA1_MIT	PF21126	11 - 71	5.5e-18	Katanin p60 subunit A1, MIT domain
AAA	PF00004	278 - 415	3.1e-38	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	437 - 479	2.5e-12	AAA+ lid domain
Vps4_C	PF09336	480 - 524	1e-09	Vps4 C terminal oligomerisation domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000443)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g35490 FvH4_6g35490 FvH4_6g35500 FvH4_6g35500 FvH4_6g35500 FvH4_6g35520 FvH4_6g35520 FvH4_6g35540 FvH4_6g35550
malus_domestica	MD09G1175400.v1.1
pyrus_communis	pycom09g09260
rosa_chinensis	RchiOBHm_Chr2g0144821 RchiOBHm_Chr2g0145011 RchiOBHm_Chr2g0145061 RchiOBHm_Chr2g0147051 RchiOBHm_Chr2g0147071 RchiOBHm_Chr2g0147111 RchiOBHm_Chr2g0147141
rosa_laevigata	RLG00000020116 RLG00000020119 RLG00000020120 RLG00000020122 RLG00000020243 RLG00000020245 RLG00000020246
rosa_multiflora	Rmu_co8407447.1_g000001 Rmu_sc0000070.1_g000059 Rmu_sc0001668.1_g000005 Rmu_sc0001880.1_g000013 Rmu_sc0001880.1_g000020 Rmu_sc0001880.1_g000023 Rmu_sc0001880.1_g000027 Rmu_sc0002354.1_g000023 Rmu_sc0002506.1_g000001 Rmu_sc0002506.1_g000016 Rmu_sc0004897.1_g000008 Rmu_sc0007988.1_g000001
rosa_roxburghii	Rroxscaffold_1G00033230 Rroxscaffold_2G00099670 Rroxscaffold_2G00099720 Rroxscaffold_2G00100900 Rroxscaffold_2G00100930 Rroxscaffold_2G00100940
rosa_rugosa	Rorug02G0390000 Rorug02G0390100 Rorug02G0390200 Rorug02G0390200 Rorug02G0390200 Rorug02G0398400 Rorug02G0398500 Rorug02G0398600
rosa_samantha	Rh2AG442200 Rh2AG442500 Rh2AG442700 Rh2AG455600 Rh2AG455700 Rh2AG455800 Rh2AG455900 Rh2BG452500 Rh2BG453000 Rh2BG453700 Rh2BG467900 Rh2BG468100 Rh2BG468200 Rh2CG429200 Rh2CG429500 Rh2CG429600 Rh2CG429700 Rh2CG443000 Rh2CG443100 Rh2CG443200 Rh2CG443300 Rh2DG462200 Rh2DG463000 Rh2DG463200 Rh2DG463700 Rh2DG477300 Rh2DG477500 Rh2DG477600 Rh4AG390700 Rh5AG320200
rosa_wichuraiana	Rw2G036130 Rw2G036170 Rw2G036180 Rw2G037150 Rw2G037160 Rw2G037170 Rw2G037180 Rw2G037260 Rw2G037270 Rw2G037280 Rw2G037290 Rw5G030070 Rw5G030220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	258
AccB7I	CCANNNNNTGG	1 cut(s)	458
AccBSI	CCGCTC	1 cut(s)	156
AccII	CGCG	1 cut(s)	59
AciI	CCGC	3 cut(s)	102, 154, 545
AclI	AACGTT	1 cut(s)	1371
AclWI	GGATC	7 cut(s)	145, 362, 532, 656, 818, 1463, 1476
AcoI	YGGCCR	1 cut(s)	502
AcsI	RAATTY	2 cut(s)	1249, 1282
AcuI	CTGAAG	4 cut(s)	59, 315, 333, 765
AcvI	CACGTG	1 cut(s)	1427
AcyI	GRCGYC	1 cut(s)	259
AfaI	GTAC	4 cut(s)	56, 696, 1009, 1147
AfiI	CCNNNNNNNGG	9 cut(s)	43, 228, 255, 458, 506, 827, 857, 1080, 1395
AflIII	ACRYGT	1 cut(s)	1424
AjnI	CCWGG	4 cut(s)	499, 709, 850, 1104
AloI	GAACNNNNNNTCC	2 cut(s)	1086, 1118
AluBI	AGCT	7 cut(s)	43, 881, 935, 995, 1175, 1270, 1415
AluI	AGCT	7 cut(s)	43, 881, 935, 995, 1175, 1270, 1415
Alw26I	GTCTC	3 cut(s)	811, 922, 1210
AlwI	GGATC	7 cut(s)	145, 362, 532, 656, 818, 1463, 1476
Ama87I	CYCGRG	1 cut(s)	1047
AoxI	GGCC	5 cut(s)	253, 383, 502, 516, 736
ApeKI	GCWGC	1 cut(s)	1172
ApoI	RAATTY	2 cut(s)	1249, 1282
Asp700I	GAANNNNTTC	1 cut(s)	801
AspLEI	GCGC	2 cut(s)	261, 1003
AspS9I	GGNCC	7 cut(s)	8, 253, 547, 656, 845, 1102, 1510
AsuC2I	CCSGG	3 cut(s)	564, 1048, 1049
AsuHPI	GGTGA	5 cut(s)	441, 629, 1096, 1367, 1516
AvaI	CYCGRG	1 cut(s)	1047
AvaII	GGWCC	6 cut(s)	8, 547, 656, 845, 1102, 1510
BamHI	GGATCC	1 cut(s)	1468
BanI	GGYRCC	1 cut(s)	258
BanII	GRGCYC	2 cut(s)	72, 472
BarI	GAAGNNNNNNTAC	2 cut(s)	385, 417
BbrPI	CACGTG	1 cut(s)	1427
BbsI	GAAGAC	1 cut(s)	546
BbvCI	CCTCAGC	1 cut(s)	624
BbvI	GCAGC	1 cut(s)	1184
BccI	CCATC	8 cut(s)	55, 452, 623, 714, 1106, 1136, 1156, 1337
BceAI	ACGGC	6 cut(s)	115, 489, 755, 1245, 1362, 1559
BciT130I	CCWGG	4 cut(s)	501, 711, 852, 1106
BcnI	CCSGG	3 cut(s)	564, 1048, 1049
BcoDI	GTCTC	3 cut(s)	811, 922, 1210
BfaI	CTAG	2 cut(s)	215, 594
BfoI	RGCGCY	1 cut(s)	262
BglI	GCCNNNNNGGC	2 cut(s)	252, 643
BisI	GCNGC	2 cut(s)	103, 1173
BlsI	GCNGC	2 cut(s)	104, 1174
Bme1390I	CCNGG	7 cut(s)	501, 564, 711, 852, 1048, 1049, 1106
Bme18I	GGWCC	6 cut(s)	8, 547, 656, 845, 1102, 1510
BmeT110I	CYCGRG	1 cut(s)	1047
BmgT120I	GGNCC	7 cut(s)	8, 253, 547, 656, 845, 1102, 1510
BmiI	GGNNCC	4 cut(s)	9, 260, 657, 1470
BmrFI	CCNGG	7 cut(s)	501, 564, 711, 852, 1048, 1049, 1106
BmsI	GCATC	5 cut(s)	208, 610, 780, 1064, 1372
BpiI	GAAGAC	1 cut(s)	546
BplI	GAGNNNNNCTC	2 cut(s)	1510, 1542
BpmI	CTGGAG	4 cut(s)	732, 782, 1060, 1241
Bpu10I	CCTNAGC	1 cut(s)	624
BpuEI	CTTGAG	1 cut(s)	1290
BpuMI	CCSGG	3 cut(s)	564, 1048, 1049
BsaAI	YACGTR	1 cut(s)	1427
BsaHI	GRCGYC	1 cut(s)	259
BsaI	GGTCTC	1 cut(s)	811
BsaJI	CCNNGG	8 cut(s)	189, 249, 505, 821, 1047, 1048, 1187, 1500
BsaWI	WCCGGW	1 cut(s)	549
BsaXI	ACNNNNNCTCC	2 cut(s)	65, 95
Bsc4I	CCNNNNNNNGG	9 cut(s)	43, 228, 255, 458, 506, 827, 857, 1080, 1395
Bse118I	RCCGGY	2 cut(s)	255, 518
Bse1I	ACTGG	4 cut(s)	702, 705, 862, 1224
Bse3DI	GCAATG	1 cut(s)	105
BseBI	CCWGG	4 cut(s)	501, 711, 852, 1106
BseDI	CCNNGG	8 cut(s)	189, 249, 505, 821, 1047, 1048, 1187, 1500
BseGI	GGATG	9 cut(s)	171, 290, 370, 634, 697, 730, 795, 1404, 1459
BseLI	CCNNNNNNNGG	9 cut(s)	43, 228, 255, 458, 506, 827, 857, 1080, 1395
BseMI	GCAATG	1 cut(s)	105
BseMII	CTCAG	5 cut(s)	125, 555, 615, 882, 1222
BseNI	ACTGG	4 cut(s)	702, 705, 862, 1224
BseRI	GAGGAG	3 cut(s)	910, 1228, 1417
BseXI	GCAGC	1 cut(s)	1184
Bsh1236I	CGCG	1 cut(s)	59
BshFI	GGCC	5 cut(s)	255, 385, 504, 518, 738
BshNI	GGYRCC	1 cut(s)	258
BsiHKCI	CYCGRG	1 cut(s)	1047
BsiSI	CCGG	5 cut(s)	256, 519, 550, 564, 1048
BslFI	GGGAC	3 cut(s)	410, 669, 1205
BslI	CCNNNNNNNGG	9 cut(s)	43, 228, 255, 458, 506, 827, 857, 1080, 1395
BsmAI	GTCTC	3 cut(s)	811, 922, 1210
BsmFI	GGGAC	3 cut(s)	410, 669, 1205
BsnI	GGCC	5 cut(s)	255, 385, 504, 518, 738
Bso31I	GGTCTC	1 cut(s)	811
BsoBI	CYCGRG	1 cut(s)	1047
Bsp1286I	GDGCHC	2 cut(s)	72, 472
Bsp19I	CCATGG	3 cut(s)	249, 821, 1187
BspACI	CCGC	3 cut(s)	102, 154, 545
BspANI	GGCC	5 cut(s)	255, 385, 504, 518, 738
BspCNI	CTCAG	5 cut(s)	124, 554, 616, 883, 1221
BspFNI	CGCG	1 cut(s)	59
BspLI	GGNNCC	4 cut(s)	9, 260, 657, 1470
BspPI	GGATC	7 cut(s)	145, 362, 532, 656, 818, 1463, 1476
BspT107I	GGYRCC	1 cut(s)	258
BspTNI	GGTCTC	1 cut(s)	811
BsrBI	CCGCTC	1 cut(s)	156
BsrDI	GCAATG	1 cut(s)	105
BsrFI	RCCGGY	2 cut(s)	255, 518
BsrI	ACTGG	4 cut(s)	702, 705, 862, 1224
BssAI	RCCGGY	2 cut(s)	255, 518
BssECI	CCNNGG	8 cut(s)	189, 249, 505, 821, 1047, 1048, 1187, 1500
BssNI	GRCGYC	1 cut(s)	259
BssT1I	CCWWGG	4 cut(s)	249, 821, 1187, 1500
Bst2UI	CCWGG	4 cut(s)	501, 711, 852, 1106
Bst4CI	ACNGT	1 cut(s)	1294
Bst6I	CTCTTC	1 cut(s)	1248
BstACI	GRCGYC	1 cut(s)	259
BstBAI	YACGTR	1 cut(s)	1427
BstC8I	GCNNGC	5 cut(s)	45, 257, 493, 736, 1333
BstDEI	CTNAG	7 cut(s)	111, 285, 310, 541, 624, 891, 1208
BstDSI	CCRYGG	4 cut(s)	249, 505, 821, 1187
BstENI	CCTNNNNNAGG	1 cut(s)	1078
BstF5I	GGATG	9 cut(s)	171, 290, 370, 634, 697, 730, 795, 1404, 1459
BstFNI	CGCG	1 cut(s)	59
BstH2I	RGCGCY	1 cut(s)	262
BstHHI	GCGC	2 cut(s)	261, 1003
BstMAI	GTCTC	3 cut(s)	811, 922, 1210
BstMWI	GCNNNNNNNGC	7 cut(s)	252, 488, 501, 542, 608, 643, 932
BstNI	CCWGG	4 cut(s)	501, 711, 852, 1106
BstNSI	RCATGY	1 cut(s)	1447
BstSCI	CCNGG	7 cut(s)	499, 562, 709, 850, 1046, 1047, 1104
BstUI	CGCG	1 cut(s)	59
BstV1I	GCAGC	1 cut(s)	1184
BstV2I	GAAGAC	1 cut(s)	546
BstX2I	RGATCY	1 cut(s)	1468
BstXI	CCANNNNNNTGG	1 cut(s)	1112
BstYI	RGATCY	1 cut(s)	1468
BsuRI	GGCC	5 cut(s)	255, 385, 504, 518, 738
BtgI	CCRYGG	4 cut(s)	249, 505, 821, 1187
BtgZI	GCGATG	1 cut(s)	74
BtsCI	GGATG	9 cut(s)	171, 290, 370, 634, 697, 730, 795, 1404, 1459
Cac8I	GCNNGC	5 cut(s)	45, 257, 493, 736, 1333
CfoI	GCGC	2 cut(s)	261, 1003
Cfr10I	RCCGGY	2 cut(s)	255, 518
Cfr13I	GGNCC	7 cut(s)	8, 253, 547, 656, 845, 1102, 1510
Cfr9I	CCCGGG	1 cut(s)	1047
CpoI	CGGWCCG	1 cut(s)	547
CseI	GACGC	1 cut(s)	22
Csp6I	GTAC	4 cut(s)	55, 695, 1008, 1146
CspI	CGGWCCG	1 cut(s)	547
CviAII	CATG	9 cut(s)	85, 250, 281, 822, 1067, 1188, 1444, 1480, 1547
CviQI	GTAC	4 cut(s)	55, 695, 1008, 1146
DdeI	CTNAG	7 cut(s)	111, 285, 310, 541, 624, 891, 1208
DinI	GGCGCC	1 cut(s)	260
EaeI	YGGCCR	1 cut(s)	502
Eam1104I	CTCTTC	1 cut(s)	1248
EarI	CTCTTC	1 cut(s)	1248
Eco130I	CCWWGG	4 cut(s)	249, 821, 1187, 1500
Eco24I	GRGCYC	2 cut(s)	72, 472
Eco31I	GGTCTC	1 cut(s)	811
Eco32I	GATATC	1 cut(s)	338
Eco47I	GGWCC	6 cut(s)	8, 547, 656, 845, 1102, 1510
Eco57I	CTGAAG	4 cut(s)	59, 315, 333, 765
Eco72I	CACGTG	1 cut(s)	1427
Eco88I	CYCGRG	1 cut(s)	1047
EcoNI	CCTNNNNNAGG	1 cut(s)	1078
EcoO109I	RGGNCCY	1 cut(s)	656
EcoRII	CCWGG	4 cut(s)	499, 709, 850, 1104
EcoRV	GATATC	1 cut(s)	338
EcoT14I	CCWWGG	4 cut(s)	249, 821, 1187, 1500
EcoT38I	GRGCYC	2 cut(s)	72, 472
EgeI	GGCGCC	1 cut(s)	260
EheI	GGCGCC	1 cut(s)	260
ErhI	CCWWGG	4 cut(s)	249, 821, 1187, 1500
FaeI	CATG	9 cut(s)	88, 253, 284, 825, 1070, 1191, 1447, 1483, 1550
FalI	AAGNNNNNCTT	2 cut(s)	278, 310
FaqI	GGGAC	3 cut(s)	410, 669, 1205
FatI	CATG	9 cut(s)	84, 249, 280, 821, 1066, 1187, 1443, 1479, 1546
Fnu4HI	GCNGC	2 cut(s)	103, 1173
FokI	GGATG	9 cut(s)	178, 277, 377, 641, 704, 737, 802, 1411, 1466
FriOI	GRGCYC	2 cut(s)	72, 472
Fsp4HI	GCNGC	2 cut(s)	103, 1173
FspBI	CTAG	2 cut(s)	215, 594
GlaI	GCGC	2 cut(s)	260, 1002
GluI	GCNGC	2 cut(s)	103, 1173
GsuI	CTGGAG	4 cut(s)	732, 782, 1060, 1241
HaeII	RGCGCY	1 cut(s)	262
HaeIII	GGCC	5 cut(s)	255, 385, 504, 518, 738
HapII	CCGG	5 cut(s)	256, 519, 550, 564, 1048
HgaI	GACGC	1 cut(s)	22
HhaI	GCGC	2 cut(s)	261, 1003
Hin1I	GRCGYC	1 cut(s)	259
Hin1II	CATG	9 cut(s)	88, 253, 284, 825, 1070, 1191, 1447, 1483, 1550
Hin6I	GCGC	2 cut(s)	259, 1001
HinP1I	GCGC	2 cut(s)	259, 1001
HinfI	GANTC	3 cut(s)	605, 1031, 1070
HpaII	CCGG	5 cut(s)	256, 519, 550, 564, 1048
HphI	GGTGA	5 cut(s)	441, 629, 1096, 1367, 1516
Hpy166II	GTNNAC	2 cut(s)	959, 1315
Hpy188I	TCNGA	8 cut(s)	12, 114, 190, 474, 1093, 1278, 1534, 1564
Hpy8I	GTNNAC	2 cut(s)	959, 1315
Hpy99I	CGWCG	2 cut(s)	16, 101
HpyAV	CCTTC	9 cut(s)	59, 172, 222, 273, 304, 820, 1074, 1444, 1501
HpyCH4III	ACNGT	1 cut(s)	1294
HpyCH4IV	ACGT	2 cut(s)	1371, 1426
HpyCH4V	TGCA	6 cut(s)	28, 419, 482, 512, 989, 1041
HpyF10VI	GCNNNNNNNGC	7 cut(s)	252, 488, 501, 542, 608, 643, 932
HpyF3I	CTNAG	7 cut(s)	111, 285, 310, 541, 624, 891, 1208
HpySE526I	ACGT	2 cut(s)	1371, 1426
Hsp92I	GRCGYC	1 cut(s)	259
Hsp92II	CATG	9 cut(s)	88, 253, 284, 825, 1070, 1191, 1447, 1483, 1550
HspAI	GCGC	2 cut(s)	259, 1001
KasI	GGCGCC	1 cut(s)	258
KroI	GCCGGC	1 cut(s)	255
KroNI	GCCGGC	1 cut(s)	257
Lsp1109I	GCAGC	1 cut(s)	1184
LweI	GCATC	5 cut(s)	208, 610, 780, 1064, 1372
MaeI	CTAG	2 cut(s)	215, 594
MaeII	ACGT	2 cut(s)	1371, 1426
MaeIII	GTNAC	2 cut(s)	447, 1355
MbiI	CCGCTC	1 cut(s)	156
MflI	RGATCY	1 cut(s)	1468
MhlI	GDGCHC	2 cut(s)	72, 472
MluCI	AATT	6 cut(s)	276, 463, 1026, 1042, 1249, 1282
Mly113I	GGCGCC	1 cut(s)	259
MlyI	GAGTC	1 cut(s)	1079
MmeI	TCCRAC	3 cut(s)	35, 365, 1537
MroNI	GCCGGC	1 cut(s)	255
MroXI	GAANNNNTTC	1 cut(s)	801
MseI	TTAA	2 cut(s)	128, 237
MslI	CAYNNNNRTG	1 cut(s)	83
MspA1I	CMGCKG	1 cut(s)	545
MspI	CCGG	5 cut(s)	256, 519, 550, 564, 1048
MspR9I	CCNGG	7 cut(s)	501, 564, 711, 852, 1048, 1049, 1106
MvaI	CCWGG	4 cut(s)	501, 711, 852, 1106
MvnI	CGCG	1 cut(s)	59
MwoI	GCNNNNNNNGC	7 cut(s)	252, 488, 501, 542, 608, 643, 932
NaeI	GCCGGC	1 cut(s)	257
NarI	GGCGCC	1 cut(s)	259
NciI	CCSGG	3 cut(s)	564, 1048, 1049
NcoI	CCATGG	3 cut(s)	249, 821, 1187
NgoMIV	GCCGGC	1 cut(s)	255
NlaIII	CATG	9 cut(s)	88, 253, 284, 825, 1070, 1191, 1447, 1483, 1550
NlaIV	GGNNCC	4 cut(s)	9, 260, 657, 1470
NmeAIII	GCCGAG	2 cut(s)	247, 1029
NmuCI	GTSAC	2 cut(s)	447, 1355
NspI	RCATGY	1 cut(s)	1447
PdiI	GCCGGC	1 cut(s)	257
PdmI	GAANNNNTTC	1 cut(s)	801
PfeI	GAWTC	2 cut(s)	605, 1031
PflMI	CCANNNNNTGG	1 cut(s)	458
PfoI	TCCNGGA	2 cut(s)	709, 850
PkrI	GCNGC	2 cut(s)	104, 1174
PleI	GAGTC	1 cut(s)	1078
PluTI	GGCGCC	1 cut(s)	262
PmaCI	CACGTG	1 cut(s)	1427
PmlI	CACGTG	1 cut(s)	1427
PpsI	GAGTC	1 cut(s)	1078
Ppu21I	YACGTR	1 cut(s)	1427
PpuMI	RGGWCCY	1 cut(s)	656
Psp1406I	AACGTT	1 cut(s)	1371
Psp5II	RGGWCCY	1 cut(s)	656
Psp6I	CCWGG	4 cut(s)	499, 709, 850, 1104
PspCI	CACGTG	1 cut(s)	1427
PspGI	CCWGG	4 cut(s)	499, 709, 850, 1104
PspN4I	GGNNCC	4 cut(s)	9, 260, 657, 1470
PspPI	GGNCC	7 cut(s)	8, 253, 547, 656, 845, 1102, 1510
PspPPI	RGGWCCY	1 cut(s)	656
PsuI	RGATCY	1 cut(s)	1468
RsaI	GTAC	4 cut(s)	56, 696, 1009, 1147
RsaNI	GTAC	4 cut(s)	55, 695, 1008, 1146
RseI	CAYNNNNRTG	1 cut(s)	83
Rsr2I	CGGWCCG	1 cut(s)	547
RsrII	CGGWCCG	1 cut(s)	547
SaqAI	TTAA	2 cut(s)	128, 237
SatI	GCNGC	2 cut(s)	103, 1173
Sau96I	GGNCC	7 cut(s)	8, 253, 547, 656, 845, 1102, 1510
SchI	GAGTC	1 cut(s)	1079
ScrFI	CCNGG	7 cut(s)	501, 564, 711, 852, 1048, 1049, 1106
SduI	GDGCHC	2 cut(s)	72, 472
SfaNI	GCATC	5 cut(s)	208, 610, 780, 1064, 1372
SfoI	GGCGCC	1 cut(s)	260
SinI	GGWCC	6 cut(s)	8, 547, 656, 845, 1102, 1510
SmaI	CCCGGG	1 cut(s)	1049
SmiMI	CAYNNNNRTG	1 cut(s)	83
SmlI	CTYRAG	1 cut(s)	1305
SmoI	CTYRAG	1 cut(s)	1305
Sse9I	AATT	6 cut(s)	276, 463, 1026, 1042, 1249, 1282
SsiI	CCGC	3 cut(s)	102, 154, 545
SspDI	GGCGCC	1 cut(s)	258
SspI	AATATT	1 cut(s)	800
SspMI	CTAG	2 cut(s)	215, 594
StyD4I	CCNGG	7 cut(s)	499, 562, 709, 850, 1046, 1047, 1104
StyI	CCWWGG	4 cut(s)	249, 821, 1187, 1500
TaaI	ACNGT	1 cut(s)	1294
TaiI	ACGT	2 cut(s)	1374, 1429
TaqI	TCGA	2 cut(s)	96, 1448
TasI	AATT	6 cut(s)	276, 463, 1026, 1042, 1249, 1282
TatI	WGTACW	2 cut(s)	694, 1007
TauI	GCSGC	1 cut(s)	105
TfiI	GAWTC	2 cut(s)	605, 1031
Tru1I	TTAA	2 cut(s)	128, 237
Tru9I	TTAA	2 cut(s)	128, 237
TseFI	GTSAC	2 cut(s)	447, 1355
TseI	GCWGC	1 cut(s)	1172
Tsp45I	GTSAC	2 cut(s)	447, 1355
TspDTI	ATGAA	7 cut(s)	182, 269, 330, 1006, 1038, 1152, 1563
TspGWI	ACGGA	1 cut(s)	1531
TspMI	CCCGGG	1 cut(s)	1047
Van91I	CCANNNNNTGG	1 cut(s)	458
VpaK11BI	GGWCC	6 cut(s)	8, 547, 656, 845, 1102, 1510
XagI	CCTNNNNNAGG	1 cut(s)	1078
XapI	RAATTY	2 cut(s)	1249, 1282
XceI	RCATGY	1 cut(s)	1447
XmaI	CCCGGG	1 cut(s)	1047
XmnI	GAANNNNTTC	1 cut(s)	801
XspI	CTAG	2 cut(s)	215, 594

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.