Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0000443

Physical Location & Seq

Genomic Coordinates Reverse (-)

67054629 .. 67140922

Gene Structure 86294 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG463700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1677 bp

ATGGCAAGTCTTAGCTACATTGTTTACGTGTTGGCTAGCCTATTCAACCTAATTAGCTTCCTTCTTTACGGTCATCATGATCATCCTGATCAGTACTCCAGTAGTACTTGTATAGAACACAATCATAATAAGGTGGCGTTGTTTGTGTTTGGGGACTCACCATTTGAGGCTGGAAACAACCAATACCTTCCTAATATAACCGTAGAAGAAGACATAGCGATAGCCTGGCCATATGGAGAAACATACTTCCACCATCCCACTGGAAGATACAGCGATGGGCGTATTGTCCCAGATTTTATTGCTAAGTTTGCAAAACTGCCAATGCTTCCACCATATCTGCAACCCGGTCCACATGATTTTACCGATGGATCCAACTTTGCTTCAGCAGGAGCCGGAGTTCTTGAAACACCTGACCCAGGATTGGCAGTAAGTCTTCCGACACAGTTAAGCTATTTAAAAAATGTGGCAAAGTTGCTGGAGCTGAAGTTAGGTGATTTAGAAACCAAACGTGTGCTGAGGACCGCTGTTTTCTTGATCAGCATCGGAGGGGTCGATTATTTTGACTTCTACTCTACATATCCAAATGCCACCGAGTCCCTCCGATCCGAATTCATAGCAAATGTGATTGGTAACTTGACCGTTGTGCTCAAAGAAATATACAACTTAGGAGGAAGGAAGATTGGATTTCAGAATGTAGGATCTATTGGGTGCCTACCTTATTTTAGAGAATTATACGGTGCTACTGAAGGGTGTGTTGAAGGACTTTCGACTTTGGCGAGGCTACATAATGGAGCTCTAGCTAATGCTCTCAAAGAGCTAGAGCTAGAGCTATCGGGATTCAAATATTCAATATTTAACTACTATGACGTGACTTTGGACCTATACCATAACCCTGCAAAACATGGGTTCACAAATGGGTCGGATGCATGTTGTGGTATAGGACCATACCGAGGAGATGATTGCGGCGGAGATAATGGAACCGAACCTTATGAATTGTGCCCAAACCCAGGTGACTATGTGTGGTGGGATGGTGGCCATTCGACTGAAAGAGCAAACCTTAAATTGGCAGAGCTAATATGGAGTGGCACGCTAAATACTACTGGGCCTTACAATGTCAAACAGTTTTTTCAGCAAATTGATGGTTTTTCACTTTATCATGGGTTTAATTGGGGTTTTCTGAAGTTGGTAGCAGTTTGGGAGTTTTGTGACTTGGTCTCGTTTTTCCAATCAATCCAAGGCAATATTGCAATCAGGGGAGTACTTTATGGGCCTCCCTCGCTTCTTCTTCCTGAGATAGCAGACAATACAGCCAGGGTAATTGATGAGAAAGTAGATGGAAATGCAGTTAAGGTGCAAGTGAAGGCAGGAACTTTGACAGCGCCATTTCACCGCTGGGATTTGGTGGACAAAGTGAGTCCAGATTTCTCAAATAGAAGTGAAAAGACTTTTGCTTCACAACTTGGTCCTAGTTTTCTGATTTCTTTCCTCCTTGCTTGCAAGTTGCTAGAAGCACTCCAAGGGAACTTCAAGGTGTGCTACCATATCACGTCCCAGCTTTACACCGATAATGTCTACCGTGTTCAAACTTTTGACAAAACATTTACTTTGACTGTTGTTTGTTACCATTTGAATTTGATGGTTATCTTGGAAGCTGCTCCCATTGAAATATCATGGCTT

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005774 GO:0005777 GO:0005829 GO:0005840 GO:0005911 GO:0006082 GO:0006790 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009056 GO:0009266 GO:0009409 GO:0009505 GO:0009506 GO:0009507 GO:0009526 GO:0009536 GO:0009605 GO:0009607 GO:0009617 GO:0009625 GO:0009628 GO:0009941 GO:0009987 GO:0016020 GO:0016143 GO:0016145 GO:0019748 GO:0019757 GO:0019759 GO:0019760 GO:0019762 GO:0022626 GO:0030054 GO:0030312 GO:0031090 GO:0031967 GO:0031975 GO:0032991 GO:0042579 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043436 GO:0044237 GO:0044248 GO:0044273 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0048046 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0071704 GO:0071944 GO:0098542 GO:0098588 GO:0098805 GO:1901135 GO:1901136 GO:1901564 GO:1901565 GO:1901575 GO:1901657 GO:1901658 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lipase_GDSL

Protein Analysis

559

Amino Acids

62.08

Weight (kDa)

5.2

Isoelectric Point (pI)

29.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lipase_GDSL	PF00657	47 - 359	3.5e-24	GDSL-like Lipase/Acylhydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000443)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g35490 FvH4_6g35490 FvH4_6g35500 FvH4_6g35500 FvH4_6g35500 FvH4_6g35520 FvH4_6g35520 FvH4_6g35540 FvH4_6g35550
malus_domestica	MD09G1175400.v1.1
pyrus_communis	pycom09g09260
rosa_chinensis	RchiOBHm_Chr2g0144821 RchiOBHm_Chr2g0145011 RchiOBHm_Chr2g0145061 RchiOBHm_Chr2g0147051 RchiOBHm_Chr2g0147071 RchiOBHm_Chr2g0147111 RchiOBHm_Chr2g0147141
rosa_laevigata	RLG00000020116 RLG00000020119 RLG00000020120 RLG00000020122 RLG00000020243 RLG00000020245 RLG00000020246
rosa_multiflora	Rmu_co8407447.1_g000001 Rmu_sc0000070.1_g000059 Rmu_sc0001668.1_g000005 Rmu_sc0001880.1_g000013 Rmu_sc0001880.1_g000020 Rmu_sc0001880.1_g000023 Rmu_sc0001880.1_g000027 Rmu_sc0002354.1_g000023 Rmu_sc0002506.1_g000001 Rmu_sc0002506.1_g000016 Rmu_sc0004897.1_g000008 Rmu_sc0007988.1_g000001
rosa_roxburghii	Rroxscaffold_1G00033230 Rroxscaffold_2G00099670 Rroxscaffold_2G00099720 Rroxscaffold_2G00100900 Rroxscaffold_2G00100930 Rroxscaffold_2G00100940
rosa_rugosa	Rorug02G0390000 Rorug02G0390100 Rorug02G0390200 Rorug02G0390200 Rorug02G0390200 Rorug02G0398400 Rorug02G0398500 Rorug02G0398600
rosa_samantha	Rh2AG442200 Rh2AG442500 Rh2AG442700 Rh2AG455600 Rh2AG455700 Rh2AG455800 Rh2AG455900 Rh2BG452500 Rh2BG453000 Rh2BG453700 Rh2BG467900 Rh2BG468100 Rh2BG468200 Rh2CG429200 Rh2CG429500 Rh2CG429600 Rh2CG429700 Rh2CG443000 Rh2CG443100 Rh2CG443200 Rh2CG443300 Rh2DG462200 Rh2DG463000 Rh2DG463200 Rh2DG463700 Rh2DG477300 Rh2DG477500 Rh2DG477600 Rh4AG390700 Rh5AG320200
rosa_wichuraiana	Rw2G036130 Rw2G036170 Rw2G036180 Rw2G037150 Rw2G037160 Rw2G037170 Rw2G037180 Rw2G037260 Rw2G037270 Rw2G037280 Rw2G037290 Rw5G030070 Rw5G030220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	708
AccI	GTMKAC	1 cut(s)	1572
AciI	CCGC	4 cut(s)	522, 963, 966, 1390
AclWI	GGATC	4 cut(s)	363, 376, 597, 706
AcoI	YGGCCR	2 cut(s)	227, 1033
AcsI	RAATTY	2 cut(s)	608, 1630
AcuI	CTGAAG	4 cut(s)	366, 503, 765, 1199
AfaI	GTAC	3 cut(s)	95, 106, 1260
AfiI	CCNNNNNNNGG	5 cut(s)	416, 421, 950, 1007, 1063
AflIII	ACRYGT	2 cut(s)	27, 508
AgsI	TTSAA	9 cut(s)	46, 404, 758, 841, 849, 1528, 1583, 1630, 1664
AjiI	CACGTC	2 cut(s)	868, 1548
AjnI	CCWGG	4 cut(s)	224, 415, 1006, 1310
AloI	GAACNNNNNNTCC	2 cut(s)	381, 413
Alw21I	GWGCWC	2 cut(s)	648, 796
Alw26I	GTCTC	1 cut(s)	1219
AlwI	GGATC	4 cut(s)	363, 376, 597, 706
AoxI	GGCC	4 cut(s)	227, 1033, 1103, 1268
ApeKI	GCWGC	1 cut(s)	1652
ApoI	RAATTY	2 cut(s)	608, 1630
ArsI	GACNNNNNNTTYG	2 cut(s)	146, 178
AspLEI	GCGC	1 cut(s)	1381
AspS9I	GGNCC	7 cut(s)	347, 519, 877, 941, 1103, 1268, 1463
AsuC2I	CCSGG	1 cut(s)	345
AsuHPI	GGTGA	4 cut(s)	150, 503, 1022, 1379
AsuNHI	GCTAGC	1 cut(s)	35
AvaII	GGWCC	5 cut(s)	347, 519, 877, 941, 1463
BaeGI	GKGCMC	1 cut(s)	1001
BalI	TGGCCA	2 cut(s)	229, 1035
BamHI	GGATCC	1 cut(s)	368
BanI	GGYRCC	1 cut(s)	708
BanII	GRGCYC	1 cut(s)	796
BbsI	GAAGAC	2 cut(s)	216, 425
Bbv12I	GWGCWC	2 cut(s)	648, 796
BbvCI	CCTCAGC	1 cut(s)	515
BbvI	GCAGC	1 cut(s)	1639
BccI	CCATC	7 cut(s)	261, 269, 359, 1022, 1133, 1328, 1630
BciT130I	CCWGG	4 cut(s)	226, 417, 1008, 1312
BclI	TGATCA	3 cut(s)	79, 88, 534
BcnI	CCSGG	1 cut(s)	345
BcoDI	GTCTC	1 cut(s)	1219
BfaI	CTAG	6 cut(s)	36, 797, 818, 824, 1467, 1505
BfoI	RGCGCY	1 cut(s)	1382
BisI	GCNGC	2 cut(s)	964, 1653
BlsI	GCNGC	2 cut(s)	965, 1654
BmcAI	AGTACT	3 cut(s)	95, 106, 1260
Bme1390I	CCNGG	5 cut(s)	226, 345, 417, 1008, 1312
Bme18I	GGWCC	5 cut(s)	347, 519, 877, 941, 1463
BmgBI	CACGTC	2 cut(s)	868, 1548
BmgT120I	GGNCC	7 cut(s)	347, 519, 877, 941, 1103, 1268, 1463
BmiI	GGNNCC	4 cut(s)	370, 391, 710, 979
BmrFI	CCNGG	5 cut(s)	226, 345, 417, 1008, 1312
BmrI	ACTGGG	1 cut(s)	1110
BmsI	GCATC	2 cut(s)	549, 913
BmtI	GCTAGC	1 cut(s)	39
BmuI	ACTGGG	1 cut(s)	1110
BpiI	GAAGAC	2 cut(s)	216, 425
BpmI	CTGGAG	2 cut(s)	82, 497
Bpu10I	CCTNAGC	1 cut(s)	515
BpuMI	CCSGG	1 cut(s)	345
BsaAI	YACGTR	1 cut(s)	28
BsaBI	GATNNNNATC	2 cut(s)	539, 1640
BsaI	GGTCTC	1 cut(s)	1219
BsaJI	CCNNGG	6 cut(s)	415, 949, 1006, 1234, 1311, 1516
BsaXI	ACNNNNNCTCC	4 cut(s)	381, 411, 470, 500
Bsc4I	CCNNNNNNNGG	5 cut(s)	416, 421, 950, 1007, 1063
Bse1I	ACTGG	3 cut(s)	99, 265, 1105
Bse8I	GATNNNNATC	2 cut(s)	539, 1640
BseBI	CCWGG	4 cut(s)	226, 417, 1008, 1312
BseDI	CCNNGG	6 cut(s)	415, 949, 1006, 1234, 1311, 1516
BseGI	GGATG	4 cut(s)	82, 253, 928, 1033
BseJI	GATNNNNATC	2 cut(s)	539, 1640
BseLI	CCNNNNNNNGG	5 cut(s)	416, 421, 950, 1007, 1063
BseMII	CTCAG	2 cut(s)	506, 1281
BseNI	ACTGG	3 cut(s)	99, 265, 1105
BseRI	GAGGAG	1 cut(s)	966
BseSI	GKGCMC	1 cut(s)	1001
BseXI	GCAGC	1 cut(s)	1639
BseYI	CCCAGC	2 cut(s)	1392, 1551
BshFI	GGCC	4 cut(s)	229, 1035, 1105, 1270
BshNI	GGYRCC	1 cut(s)	708
BsiHKAI	GWGCWC	2 cut(s)	648, 796
BsiSI	CCGG	2 cut(s)	345, 393
BslFI	GGGAC	4 cut(s)	167, 272, 580, 1534
BslI	CCNNNNNNNGG	5 cut(s)	416, 421, 950, 1007, 1063
BsmAI	GTCTC	1 cut(s)	1219
BsmFI	GGGAC	4 cut(s)	167, 272, 580, 1534
BsnI	GGCC	4 cut(s)	229, 1035, 1105, 1270
Bso31I	GGTCTC	1 cut(s)	1219
Bsp1286I	GDGCHC	3 cut(s)	648, 796, 1001
Bsp143I	GATC	6 cut(s)	79, 88, 368, 534, 602, 698
BspACI	CCGC	4 cut(s)	522, 963, 966, 1390
BspANI	GGCC	4 cut(s)	229, 1035, 1105, 1270
BspCNI	CTCAG	2 cut(s)	507, 1282
BspHI	TCATGA	1 cut(s)	76
BspLI	GGNNCC	4 cut(s)	370, 391, 710, 979
BspOI	GCTAGC	1 cut(s)	39
BspPI	GGATC	4 cut(s)	363, 376, 597, 706
BspT107I	GGYRCC	1 cut(s)	708
BspTNI	GGTCTC	1 cut(s)	1219
BsrI	ACTGG	3 cut(s)	99, 265, 1105
BssECI	CCNNGG	6 cut(s)	415, 949, 1006, 1234, 1311, 1516
BssMI	GATC	6 cut(s)	79, 88, 368, 534, 602, 698
BssT1I	CCWWGG	2 cut(s)	1234, 1516
Bst2UI	CCWGG	4 cut(s)	226, 417, 1008, 1312
Bst4CI	ACNGT	8 cut(s)	71, 202, 444, 640, 737, 1122, 1577, 1612
BstBAI	YACGTR	1 cut(s)	28
BstC8I	GCNNGC	3 cut(s)	37, 1088, 1495
BstDEI	CTNAG	5 cut(s)	11, 303, 515, 664, 1290
BstENI	CCTNNNNNAGG	1 cut(s)	414
BstF5I	GGATG	4 cut(s)	82, 253, 928, 1033
BstH2I	RGCGCY	1 cut(s)	1382
BstHHI	GCGC	1 cut(s)	1381
BstKTI	GATC	6 cut(s)	82, 91, 371, 537, 605, 701
BstMAI	GTCTC	1 cut(s)	1219
BstMBI	GATC	6 cut(s)	79, 88, 368, 534, 602, 698
BstMWI	GCNNNNNNNGC	2 cut(s)	308, 1276
BstNI	CCWGG	4 cut(s)	226, 417, 1008, 1312
BstNSI	RCATGY	1 cut(s)	930
BstSCI	CCNGG	5 cut(s)	224, 343, 415, 1006, 1310
BstSLI	GKGCMC	1 cut(s)	1001
BstV1I	GCAGC	1 cut(s)	1639
BstV2I	GAAGAC	2 cut(s)	216, 425
BstX2I	RGATCY	2 cut(s)	368, 698
BstXI	CCANNNNNNTGG	1 cut(s)	260
BstYI	RGATCY	2 cut(s)	368, 698
BsuRI	GGCC	4 cut(s)	229, 1035, 1105, 1270
BtgZI	GCGATG	1 cut(s)	288
BtrI	CACGTC	2 cut(s)	868, 1548
BtsCI	GGATG	4 cut(s)	82, 253, 928, 1033
BtsIMutI	CAGTG	1 cut(s)	258
Cac8I	GCNNGC	3 cut(s)	37, 1088, 1495
CciI	TCATGA	1 cut(s)	76
CfoI	GCGC	1 cut(s)	1381
Cfr13I	GGNCC	7 cut(s)	347, 519, 877, 941, 1103, 1268, 1463
Csp6I	GTAC	3 cut(s)	94, 105, 1259
CviAII	CATG	6 cut(s)	77, 353, 902, 927, 1157, 1671
CviQI	GTAC	3 cut(s)	94, 105, 1259
DdeI	CTNAG	5 cut(s)	11, 303, 515, 664, 1290
DpnI	GATC	6 cut(s)	81, 90, 370, 536, 604, 700
DpnII	GATC	6 cut(s)	79, 88, 368, 534, 602, 698
DraI	TTTAAA	1 cut(s)	456
EaeI	YGGCCR	2 cut(s)	227, 1033
EciI	GGCGGA	1 cut(s)	981
Ecl136II	GAGCTC	1 cut(s)	794
Eco130I	CCWWGG	2 cut(s)	1234, 1516
Eco24I	GRGCYC	1 cut(s)	796
Eco31I	GGTCTC	1 cut(s)	1219
Eco47I	GGWCC	5 cut(s)	347, 519, 877, 941, 1463
Eco53kI	GAGCTC	1 cut(s)	794
Eco57I	CTGAAG	4 cut(s)	366, 503, 765, 1199
EcoICRI	GAGCTC	1 cut(s)	794
EcoNI	CCTNNNNNAGG	1 cut(s)	414
EcoRI	GAATTC	1 cut(s)	608
EcoRII	CCWGG	4 cut(s)	224, 415, 1006, 1310
EcoT14I	CCWWGG	2 cut(s)	1234, 1516
EcoT22I	ATGCAT	1 cut(s)	928
EcoT38I	GRGCYC	1 cut(s)	796
ErhI	CCWWGG	2 cut(s)	1234, 1516
FaeI	CATG	6 cut(s)	80, 356, 905, 930, 1160, 1674
FaqI	GGGAC	4 cut(s)	167, 272, 580, 1534
FatI	CATG	6 cut(s)	76, 352, 901, 926, 1156, 1670
FauNDI	CATATG	1 cut(s)	232
FbaI	TGATCA	3 cut(s)	79, 88, 534
FblI	GTMKAC	1 cut(s)	1572
Fnu4HI	GCNGC	2 cut(s)	964, 1653
FokI	GGATG	4 cut(s)	69, 240, 935, 1040
FriOI	GRGCYC	1 cut(s)	796
Fsp4HI	GCNGC	2 cut(s)	964, 1653
FspBI	CTAG	6 cut(s)	36, 797, 818, 824, 1467, 1505
GlaI	GCGC	1 cut(s)	1380
GluI	GCNGC	2 cut(s)	964, 1653
GsaI	CCCAGC	2 cut(s)	1396, 1555
GsuI	CTGGAG	2 cut(s)	82, 497
HaeII	RGCGCY	1 cut(s)	1382
HaeIII	GGCC	4 cut(s)	229, 1035, 1105, 1270
HapII	CCGG	2 cut(s)	345, 393
HhaI	GCGC	1 cut(s)	1381
Hin1II	CATG	6 cut(s)	80, 356, 905, 930, 1160, 1674
Hin6I	GCGC	1 cut(s)	1379
HinP1I	GCGC	1 cut(s)	1379
HinfI	GANTC	4 cut(s)	155, 593, 837, 1414
HpaII	CCGG	2 cut(s)	345, 393
HphI	GGTGA	4 cut(s)	150, 503, 1022, 1379
Hpy166II	GTNNAC	5 cut(s)	25, 350, 909, 1405, 1573
Hpy188I	TCNGA	8 cut(s)	438, 545, 602, 607, 690, 922, 1179, 1476
Hpy188III	TCNNGA	7 cut(s)	77, 86, 401, 532, 834, 1289, 1418
Hpy8I	GTNNAC	5 cut(s)	25, 350, 909, 1405, 1573
HpyAV	CCTTC	6 cut(s)	71, 197, 666, 740, 752, 1354
HpyCH4III	ACNGT	8 cut(s)	71, 202, 444, 640, 737, 1122, 1577, 1612
HpyCH4IV	ACGT	4 cut(s)	27, 508, 867, 1547
HpyCH4V	TGCA	8 cut(s)	311, 340, 896, 926, 1247, 1343, 1354, 1497
HpyF10VI	GCNNNNNNNGC	2 cut(s)	308, 1276
HpyF3I	CTNAG	5 cut(s)	11, 303, 515, 664, 1290
HpySE526I	ACGT	4 cut(s)	27, 508, 867, 1547
Hsp92II	CATG	6 cut(s)	80, 356, 905, 930, 1160, 1674
HspAI	GCGC	1 cut(s)	1379
Ksp22I	TGATCA	3 cut(s)	79, 88, 534
Kzo9I	GATC	6 cut(s)	79, 88, 368, 534, 602, 698
LmnI	GCTCC	4 cut(s)	389, 478, 791, 1660
Lsp1109I	GCAGC	1 cut(s)	1639
LweI	GCATC	2 cut(s)	549, 913
MaeI	CTAG	6 cut(s)	36, 797, 818, 824, 1467, 1505
MaeII	ACGT	4 cut(s)	27, 508, 867, 1547
MaeIII	GTNAC	5 cut(s)	629, 868, 1010, 1205, 1619
MalI	GATC	6 cut(s)	81, 90, 370, 536, 604, 700
MboI	GATC	6 cut(s)	79, 88, 368, 534, 602, 698
MboII	GAAGA	7 cut(s)	218, 221, 276, 425, 688, 1274, 1277
MflI	RGATCY	2 cut(s)	368, 698
MhlI	GDGCHC	3 cut(s)	648, 796, 1001
MlsI	TGGCCA	2 cut(s)	229, 1035
MluCI	AATT	9 cut(s)	51, 608, 728, 992, 1061, 1134, 1165, 1317, 1630
MluNI	TGGCCA	2 cut(s)	229, 1035
MlyI	GAGTC	3 cut(s)	149, 602, 1423
MmeI	TCCRAC	3 cut(s)	396, 461, 900
Mox20I	TGGCCA	2 cut(s)	229, 1035
Mph1103I	ATGCAT	1 cut(s)	928
MscI	TGGCCA	2 cut(s)	229, 1035
MseI	TTAA	6 cut(s)	446, 455, 855, 1059, 1164, 1347
Msp20I	TGGCCA	2 cut(s)	229, 1035
MspA1I	CMGCKG	2 cut(s)	524, 1392
MspI	CCGG	2 cut(s)	345, 393
MspR9I	CCNGG	5 cut(s)	226, 345, 417, 1008, 1312
MvaI	CCWGG	4 cut(s)	226, 417, 1008, 1312
MwoI	GCNNNNNNNGC	2 cut(s)	308, 1276
NciI	CCSGG	1 cut(s)	345
NdeI	CATATG	1 cut(s)	232
NdeII	GATC	6 cut(s)	79, 88, 368, 534, 602, 698
NheI	GCTAGC	1 cut(s)	35
NlaIII	CATG	6 cut(s)	80, 356, 905, 930, 1160, 1674
NlaIV	GGNNCC	4 cut(s)	370, 391, 710, 979
NmuCI	GTSAC	3 cut(s)	868, 1010, 1205
NsiI	ATGCAT	1 cut(s)	928
NspI	RCATGY	1 cut(s)	930
PagI	TCATGA	1 cut(s)	76
PcsI	WCGNNNNNNNCGW	2 cut(s)	549, 773
PfeI	GAWTC	1 cut(s)	837
PflFI	GACNNNGTC	1 cut(s)	1211
PkrI	GCNGC	2 cut(s)	965, 1654
PleI	GAGTC	3 cut(s)	149, 601, 1422
PpsI	GAGTC	3 cut(s)	149, 601, 1422
Ppu21I	YACGTR	1 cut(s)	28
Psp124BI	GAGCTC	1 cut(s)	796
Psp6I	CCWGG	4 cut(s)	224, 415, 1006, 1310
PspFI	CCCAGC	2 cut(s)	1392, 1551
PspGI	CCWGG	4 cut(s)	224, 415, 1006, 1310
PspN4I	GGNNCC	4 cut(s)	370, 391, 710, 979
PspPI	GGNCC	7 cut(s)	347, 519, 877, 941, 1103, 1268, 1463
PsuI	RGATCY	2 cut(s)	368, 698
PsyI	GACNNNGTC	1 cut(s)	1211
RsaI	GTAC	3 cut(s)	95, 106, 1260
RsaNI	GTAC	3 cut(s)	94, 105, 1259
SacI	GAGCTC	1 cut(s)	796
SaqAI	TTAA	6 cut(s)	446, 455, 855, 1059, 1164, 1347
SatI	GCNGC	2 cut(s)	964, 1653
Sau3AI	GATC	6 cut(s)	79, 88, 368, 534, 602, 698
Sau96I	GGNCC	7 cut(s)	347, 519, 877, 941, 1103, 1268, 1463
ScaI	AGTACT	3 cut(s)	95, 106, 1260
SchI	GAGTC	3 cut(s)	149, 602, 1423
ScrFI	CCNGG	5 cut(s)	226, 345, 417, 1008, 1312
SduI	GDGCHC	3 cut(s)	648, 796, 1001
SfaNI	GCATC	2 cut(s)	549, 913
SinI	GGWCC	5 cut(s)	347, 519, 877, 941, 1463
Sse9I	AATT	9 cut(s)	51, 608, 728, 992, 1061, 1134, 1165, 1317, 1630
SsiI	CCGC	4 cut(s)	522, 963, 966, 1390
SspI	AATATT	3 cut(s)	845, 852, 1243
SspMI	CTAG	6 cut(s)	36, 797, 818, 824, 1467, 1505
SstI	GAGCTC	1 cut(s)	796
StyD4I	CCNGG	5 cut(s)	224, 343, 415, 1006, 1310
StyI	CCWWGG	2 cut(s)	1234, 1516
TaaI	ACNGT	8 cut(s)	71, 202, 444, 640, 737, 1122, 1577, 1612
TaiI	ACGT	4 cut(s)	30, 511, 870, 1550
TaqI	TCGA	3 cut(s)	552, 767, 1040
TasI	AATT	9 cut(s)	51, 608, 728, 992, 1061, 1134, 1165, 1317, 1630
TatI	WGTACW	3 cut(s)	93, 104, 1258
TauI	GCSGC	1 cut(s)	966
TfiI	GAWTC	1 cut(s)	837
Tru1I	TTAA	6 cut(s)	446, 455, 855, 1059, 1164, 1347
Tru9I	TTAA	6 cut(s)	446, 455, 855, 1059, 1164, 1347
TscAI	CASTG	1 cut(s)	265
TseFI	GTSAC	3 cut(s)	868, 1010, 1205
TseI	GCWGC	1 cut(s)	1652
Tsp45I	GTSAC	3 cut(s)	868, 1010, 1205
TspDTI	ATGAA	2 cut(s)	601, 1005
TspRI	CASTG	1 cut(s)	265
Tth111I	GACNNNGTC	1 cut(s)	1211
VpaK11BI	GGWCC	5 cut(s)	347, 519, 877, 941, 1463
XagI	CCTNNNNNAGG	1 cut(s)	414
XapI	RAATTY	2 cut(s)	608, 1630
XceI	RCATGY	1 cut(s)	930
XcmI	CCANNNNNNNNNTGG	2 cut(s)	257, 1389
XmiI	GTMKAC	1 cut(s)	1572
XspI	CTAG	6 cut(s)	36, 797, 818, 824, 1467, 1505
ZrmI	AGTACT	3 cut(s)	95, 106, 1260
Zsp2I	ATGCAT	1 cut(s)	928

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.