Rw2G048920

Belongs to the peptidase M16 family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Reverse (-)
76421123 .. 76424828
3706 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G048920.1

Sequence Viewer

Length: 1161 bp
ATGATCTTCAAAGGGACGGAGAAGAGGACGGCGCTGGATCTGGAGGTGGAGGTGGAGAACATGGGAGGGCACTTGAATGCTTATACCTCTAGGGAGCAGACGACCTACTACGCCAAGGTGCTCGATAAGGACGTGCCCCAGGCATTGTCTATATTGGCTGATATCTTGCAGAACTCGAGGTTCGATGAGAACCGGATTAGCCGAGAGCGTGATGTGATTTTGAGGGAAATGGAGGAGGTTGAGAAGCAACCTGATGAAGTCGTTTTTGACCATCTACATGCAAGTGCATTCCAGTACTCTCCTTTGGCCAGAACTATACTTGGGCCTGCTGCAAACATTAAGACTATTTCCAAAGAGCATCTTCAGAATTATATTAAAACACACTACACTGCTCCCAGAATGGTGATTGCTGCTTCAGGAGCTATTAAGCATGAAGACCTTGTTGGGCAAGTTAAGGGTTTGTTTACAAACTTATCAGCTGATCCAACGACAGCAAGTCAGTTGGTTGCAAAAGAACCTTCATTTTTCACCGGTTCTGAGGTCAGAATTGTTGATGATGACTTGCCTTATGCAAACTTTGCTGTTGCATTCAGTGGAGCATCCTGGACAGATCCAGACTCTATTGCTCTAATGGTCATGCAAGCAATGTTGGGTTCATGGAGTAAAAGTGTCAATGGTGGAAAGCACATGGGTTCTGAGTTGACGCAGAGGGTTGCTATTAACGAAATAGCAGAAAGCATAATGGCTTTCAACACCAACTACAAGGACACTGGCTTATTCGGCGTTTTTGCAACTGCGAAGCCGGAAGCTTTGGATGATTTGGCCTATGCAATAATGTATGAGATAACCAAGTTAGTTTATCGAGTTTCTGAAACTGATGTCATTCGTGCTCGCAATCAGTTAAAATCTTCTCTCCTTCTTCACTTGGATGGGACAAGTCCTGTAGCTGAAGATATTGGGCGCCAGCTACTCACATATGGTCGAAGAATCCCATTGCCCGAGTTGTTTGCTAGAATTGATGCTGTTGATGCAAGCACCGTCAAACGGGTTGCAAACCGGTTTATCTATGACAGGGATATTGCAATTGTTGCCATGGGTCCTGTTCAGAAATTGCCCGACTACAACTGGTTCAGACGCAGGACATACTGGAACAGATACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

386

Amino Acids

43.41

Weight (kDa)

5.83

Isoelectric Point (pI)

33.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_M16 PF00675 1 - 109 2e-35 Insulinase (Peptidase family M16)
Peptidase_M16_C PF05193 116 - 301 1.6e-37 Peptidase M16 inactive domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015224)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G02090 AT3G02090
fragaria_vesca FvH4_6g47100
malus_domestica MD09G1064100.v1.1 MD17G1057400.v1.1
prunus_persica Prupe.3G256900_v2.0.a1
pyrus_communis pycom111g05370 pycom111g05380 pycom17g05750
rosa_chinensis RchiOBHm_Chr2g0166151
rosa_laevigata RLG00000021590
rosa_multiflora Rmu_sc0006218.1_g000030
rosa_roxburghii Rroxscaffold_2G00085160
rosa_rugosa Rorug02G0520700
rosa_samantha Rh2BG598600
rosa_wichuraiana Rw2G048920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 960
AclWI GGATC 3 cut(s) 45, 476, 605
AcoI YGGCCR 1 cut(s) 306
AcuI CTGAAG 3 cut(s) 347, 399, 969
AcyI GRCGYC 1 cut(s) 961
AfaI GTAC 1 cut(s) 296
AfiI CCNNNNNNNGG 1 cut(s) 1044
AgeI ACCGGT 2 cut(s) 530, 1056
AgsI TTSAA 3 cut(s) 10, 76, 751
AhdI GACNNNNNGTC 1 cut(s) 495
AjiI CACGTC 1 cut(s) 133
AjnI CCWGG 2 cut(s) 138, 602
AjuI GAANNNNNNNTTGG 2 cut(s) 426, 458
AluBI AGCT 5 cut(s) 422, 479, 809, 947, 967
AluI AGCT 5 cut(s) 422, 479, 809, 947, 967
Alw21I GWGCWC 2 cut(s) 123, 892
AlwI GGATC 3 cut(s) 45, 476, 605
Ama87I CYCGRG 2 cut(s) 175, 998
AoxI GGCC 3 cut(s) 306, 323, 822
ApeKI GCWGC 2 cut(s) 329, 410
AsiGI ACCGGT 2 cut(s) 530, 1056
AspLEI GCGC 2 cut(s) 34, 963
AspS9I GGNCC 2 cut(s) 323, 1097
AsuHPI GGTGA 2 cut(s) 415, 520
AvaI CYCGRG 2 cut(s) 175, 998
AvaII GGWCC 1 cut(s) 1097
BaeGI GKGCMC 2 cut(s) 72, 138
BalI TGGCCA 1 cut(s) 308
BanI GGYRCC 1 cut(s) 960
BbsI GAAGAC 1 cut(s) 441
Bbv12I GWGCWC 2 cut(s) 123, 892
BbvI GCAGC 2 cut(s) 316, 397
BccI CCATC 2 cut(s) 279, 923
BceAI ACGGC 1 cut(s) 45
BcgI CGANNNNNNTGC 2 cut(s) 989, 1023
BciT130I CCWGG 2 cut(s) 140, 604
BfaI CTAG 3 cut(s) 90, 1011, 1159
BfmI CTRYAG 1 cut(s) 942
BfoI RGCGCY 2 cut(s) 35, 964
BisI GCNGC 2 cut(s) 330, 411
BlsI GCNGC 2 cut(s) 331, 412
BmcAI AGTACT 1 cut(s) 296
Bme1390I CCNGG 2 cut(s) 140, 604
Bme18I GGWCC 1 cut(s) 1097
BmeRI GACNNNNNGTC 1 cut(s) 495
BmeT110I CYCGRG 2 cut(s) 175, 998
BmgBI CACGTC 1 cut(s) 133
BmgT120I GGNCC 2 cut(s) 323, 1097
BmiI GGNNCC 2 cut(s) 962, 1098
BmrFI CCNGG 2 cut(s) 140, 604
BmsI GCATC 4 cut(s) 367, 608, 1009, 1018
BpiI GAAGAC 1 cut(s) 441
BpmI CTGGAG 1 cut(s) 62
BsaHI GRCGYC 1 cut(s) 961
BsaJI CCNNGG 3 cut(s) 114, 138, 1092
BsaWI WCCGGW 3 cut(s) 192, 530, 1056
BsaXI ACNNNNNCTCC 2 cut(s) 652, 682
Bsc4I CCNNNNNNNGG 1 cut(s) 1044
Bse118I RCCGGY 2 cut(s) 530, 1056
Bse1I ACTGG 4 cut(s) 292, 775, 1130, 1151
Bse3DI GCAATG 2 cut(s) 651, 992
BseBI CCWGG 2 cut(s) 140, 604
BseDI CCNNGG 3 cut(s) 114, 138, 1092
BseGI GGATG 3 cut(s) 599, 820, 934
BseLI CCNNNNNNNGG 1 cut(s) 1044
BseMI GCAATG 2 cut(s) 651, 992
BseMII CTCAG 2 cut(s) 528, 687
BseNI ACTGG 4 cut(s) 292, 775, 1130, 1151
BseRI GAGGAG 1 cut(s) 248
BseSI GKGCMC 2 cut(s) 72, 138
BseXI GCAGC 2 cut(s) 316, 397
BshFI GGCC 3 cut(s) 308, 325, 824
BshNI GGYRCC 1 cut(s) 960
BshTI ACCGGT 2 cut(s) 530, 1056
BsiHKAI GWGCWC 2 cut(s) 123, 892
BsiHKCI CYCGRG 2 cut(s) 175, 998
BsiSI CCGG 4 cut(s) 193, 531, 803, 1057
BslFI GGGAC 2 cut(s) 28, 946
BslI CCNNNNNNNGG 1 cut(s) 1044
BsmFI GGGAC 2 cut(s) 28, 946
BsmI GAATGC 3 cut(s) 82, 287, 587
BsnI GGCC 3 cut(s) 308, 325, 824
BsoBI CYCGRG 2 cut(s) 175, 998
Bsp1286I GDGCHC 4 cut(s) 72, 123, 138, 892
Bsp143I GATC 4 cut(s) 3, 37, 481, 610
Bsp19I CCATGG 1 cut(s) 1092
BspANI GGCC 3 cut(s) 308, 325, 824
BspCNI CTCAG 2 cut(s) 529, 688
BspLI GGNNCC 2 cut(s) 962, 1098
BspPI GGATC 3 cut(s) 45, 476, 605
BspT107I GGYRCC 1 cut(s) 960
BsrDI GCAATG 2 cut(s) 651, 992
BsrFI RCCGGY 2 cut(s) 530, 1056
BsrI ACTGG 4 cut(s) 292, 775, 1130, 1151
BssAI RCCGGY 2 cut(s) 530, 1056
BssECI CCNNGG 3 cut(s) 114, 138, 1092
BssMI GATC 4 cut(s) 3, 37, 481, 610
BssNI GRCGYC 1 cut(s) 961
BssT1I CCWWGG 2 cut(s) 114, 1092
Bst2UI CCWGG 2 cut(s) 140, 604
Bst4CI ACNGT 1 cut(s) 1039
Bst6I CTCTTC 1 cut(s) 17
BstACI GRCGYC 1 cut(s) 961
BstAPI GCANNNNNTGC 2 cut(s) 578, 1088
BstC8I GCNNGC 5 cut(s) 327, 642, 892, 965, 1033
BstDEI CTNAG 2 cut(s) 537, 696
BstDSI CCRYGG 1 cut(s) 1092
BstF5I GGATG 3 cut(s) 599, 820, 934
BstH2I RGCGCY 2 cut(s) 35, 964
BstHHI GCGC 2 cut(s) 34, 963
BstKTI GATC 4 cut(s) 6, 40, 484, 613
BstMBI GATC 4 cut(s) 3, 37, 481, 610
BstMWI GCNNNNNNNGC 5 cut(s) 419, 578, 780, 1028, 1088
BstNI CCWGG 2 cut(s) 140, 604
BstNSI RCATGY 1 cut(s) 281
BstSCI CCNGG 2 cut(s) 138, 602
BstSFI CTRYAG 1 cut(s) 942
BstSLI GKGCMC 2 cut(s) 72, 138
BstV1I GCAGC 2 cut(s) 316, 397
BstV2I GAAGAC 1 cut(s) 441
BstX2I RGATCY 2 cut(s) 37, 610
BstYI RGATCY 2 cut(s) 37, 610
BsuRI GGCC 3 cut(s) 308, 325, 824
BtgI CCRYGG 1 cut(s) 1092
BtrI CACGTC 1 cut(s) 133
BtsCI GGATG 3 cut(s) 599, 820, 934
BtsI GCAGTG 1 cut(s) 387
BtsIMutI CAGTG 3 cut(s) 387, 598, 768
Cac8I GCNNGC 5 cut(s) 327, 642, 892, 965, 1033
CfoI GCGC 2 cut(s) 34, 963
Cfr10I RCCGGY 2 cut(s) 530, 1056
Cfr13I GGNCC 2 cut(s) 323, 1097
CseI GACGC 2 cut(s) 712, 1143
Csp6I GTAC 1 cut(s) 295
CspAI ACCGGT 2 cut(s) 530, 1056
CviAII CATG 7 cut(s) 61, 278, 431, 637, 657, 688, 1093
CviQI GTAC 1 cut(s) 295
DdeI CTNAG 2 cut(s) 537, 696
DinI GGCGCC 1 cut(s) 962
DpnI GATC 4 cut(s) 5, 39, 483, 612
DpnII GATC 4 cut(s) 3, 37, 481, 610
DriI GACNNNNNGTC 1 cut(s) 495
EaeI YGGCCR 1 cut(s) 306
Eam1104I CTCTTC 1 cut(s) 17
Eam1105I GACNNNNNGTC 1 cut(s) 495
EarI CTCTTC 1 cut(s) 17
Eco130I CCWWGG 2 cut(s) 114, 1092
Eco32I GATATC 1 cut(s) 163
Eco47I GGWCC 1 cut(s) 1097
Eco57I CTGAAG 3 cut(s) 347, 399, 969
Eco88I CYCGRG 2 cut(s) 175, 998
EcoO109I RGGNCCY 1 cut(s) 1097
EcoRII CCWGG 2 cut(s) 138, 602
EcoRV GATATC 1 cut(s) 163
EcoT14I CCWWGG 2 cut(s) 114, 1092
EgeI GGCGCC 1 cut(s) 962
EheI GGCGCC 1 cut(s) 962
ErhI CCWWGG 2 cut(s) 114, 1092
FaeI CATG 7 cut(s) 64, 281, 434, 640, 660, 691, 1096
FalI AAGNNNNNCTT 2 cut(s) 345, 377
FaqI GGGAC 2 cut(s) 28, 946
FatI CATG 7 cut(s) 60, 277, 430, 636, 656, 687, 1092
FauNDI CATATG 1 cut(s) 976
Fnu4HI GCNGC 2 cut(s) 330, 411
FokI GGATG 3 cut(s) 586, 827, 941
Fsp4HI GCNGC 2 cut(s) 330, 411
FspBI CTAG 3 cut(s) 90, 1011, 1159
GlaI GCGC 2 cut(s) 33, 962
GluI GCNGC 2 cut(s) 330, 411
GsuI CTGGAG 1 cut(s) 62
HaeII RGCGCY 2 cut(s) 35, 964
HaeIII GGCC 3 cut(s) 308, 325, 824
HapII CCGG 4 cut(s) 193, 531, 803, 1057
HgaI GACGC 2 cut(s) 712, 1143
HhaI GCGC 2 cut(s) 34, 963
Hin1I GRCGYC 1 cut(s) 961
Hin1II CATG 7 cut(s) 64, 281, 434, 640, 660, 691, 1096
Hin6I GCGC 2 cut(s) 32, 961
HinP1I GCGC 2 cut(s) 32, 961
HincII GTYRAC 1 cut(s) 702
HindII GTYRAC 1 cut(s) 702
HindIII AAGCTT 1 cut(s) 807
HinfI GANTC 2 cut(s) 617, 987
HpaII CCGG 4 cut(s) 193, 531, 803, 1057
HphI GGTGA 2 cut(s) 415, 520
Hpy166II GTNNAC 2 cut(s) 465, 702
Hpy188I TCNGA 7 cut(s) 366, 538, 545, 697, 871, 1107, 1133
Hpy188III TCNNGA 3 cut(s) 41, 417, 614
Hpy8I GTNNAC 2 cut(s) 465, 702
HpyAV CCTTC 2 cut(s) 528, 926
HpyCH4III ACNGT 1 cut(s) 1039
HpyCH4IV ACGT 1 cut(s) 132
HpyF10VI GCNNNNNNNGC 5 cut(s) 419, 578, 780, 1028, 1088
HpyF3I CTNAG 2 cut(s) 537, 696
HpySE526I ACGT 1 cut(s) 132
Hsp92I GRCGYC 1 cut(s) 961
Hsp92II CATG 7 cut(s) 64, 281, 434, 640, 660, 691, 1096
HspAI GCGC 2 cut(s) 32, 961
KasI GGCGCC 1 cut(s) 960
Kzo9I GATC 4 cut(s) 3, 37, 481, 610
LmnI GCTCC 4 cut(s) 94, 397, 419, 596
Lsp1109I GCAGC 2 cut(s) 316, 397
LweI GCATC 4 cut(s) 367, 608, 1009, 1018
MaeI CTAG 3 cut(s) 90, 1011, 1159
MaeII ACGT 1 cut(s) 132
MalI GATC 4 cut(s) 5, 39, 483, 612
MboI GATC 4 cut(s) 3, 37, 481, 610
MboII GAAGA 7 cut(s) 34, 353, 446, 900, 911, 962, 996
MfeI CAATTG 1 cut(s) 1083
MflI RGATCY 2 cut(s) 37, 610
MhlI GDGCHC 4 cut(s) 72, 123, 138, 892
MlsI TGGCCA 1 cut(s) 308
MluCI AATT 5 cut(s) 367, 546, 1014, 1083, 1109
MluNI TGGCCA 1 cut(s) 308
Mly113I GGCGCC 1 cut(s) 961
MlyI GAGTC 1 cut(s) 611
MmeI TCCRAC 1 cut(s) 509
Mox20I TGGCCA 1 cut(s) 308
MscI TGGCCA 1 cut(s) 308
MseI TTAA 6 cut(s) 339, 375, 426, 453, 720, 902
MslI CAYNNNNRTG 4 cut(s) 75, 276, 282, 927
Msp20I TGGCCA 1 cut(s) 308
MspA1I CMGCKG 1 cut(s) 479
MspI CCGG 4 cut(s) 193, 531, 803, 1057
MspR9I CCNGG 2 cut(s) 140, 604
MunI CAATTG 1 cut(s) 1083
Mva1269I GAATGC 3 cut(s) 82, 287, 587
MvaI CCWGG 2 cut(s) 140, 604
MwoI GCNNNNNNNGC 5 cut(s) 419, 578, 780, 1028, 1088
NarI GGCGCC 1 cut(s) 961
NcoI CCATGG 1 cut(s) 1092
NdeI CATATG 1 cut(s) 976
NdeII GATC 4 cut(s) 3, 37, 481, 610
NlaIII CATG 7 cut(s) 64, 281, 434, 640, 660, 691, 1096
NlaIV GGNNCC 2 cut(s) 962, 1098
NmeAIII GCCGAG 1 cut(s) 227
NspI RCATGY 1 cut(s) 281
PaeR7I CTCGAG 1 cut(s) 175
PcsI WCGNNNNNNNCGW 1 cut(s) 129
PctI GAATGC 3 cut(s) 82, 287, 587
PfeI GAWTC 1 cut(s) 987
PfoI TCCNGGA 1 cut(s) 602
PinAI ACCGGT 2 cut(s) 530, 1056
PkrI GCNGC 2 cut(s) 331, 412
PleI GAGTC 1 cut(s) 611
PluTI GGCGCC 1 cut(s) 964
PpsI GAGTC 1 cut(s) 611
PpuMI RGGWCCY 1 cut(s) 1097
Psp5II RGGWCCY 1 cut(s) 1097
Psp6I CCWGG 2 cut(s) 138, 602
PspGI CCWGG 2 cut(s) 138, 602
PspN4I GGNNCC 2 cut(s) 962, 1098
PspPI GGNCC 2 cut(s) 323, 1097
PspPPI RGGWCCY 1 cut(s) 1097
PspXI VCTCGAGB 1 cut(s) 175
PsuI RGATCY 2 cut(s) 37, 610
PvuII CAGCTG 1 cut(s) 479
RsaI GTAC 1 cut(s) 296
RsaNI GTAC 1 cut(s) 295
RseI CAYNNNNRTG 4 cut(s) 75, 276, 282, 927
SaqAI TTAA 6 cut(s) 339, 375, 426, 453, 720, 902
SatI GCNGC 2 cut(s) 330, 411
Sau3AI GATC 4 cut(s) 3, 37, 481, 610
Sau96I GGNCC 2 cut(s) 323, 1097
ScaI AGTACT 1 cut(s) 296
SchI GAGTC 1 cut(s) 611
ScrFI CCNGG 2 cut(s) 140, 604
SduI GDGCHC 4 cut(s) 72, 123, 138, 892
SfaNI GCATC 4 cut(s) 367, 608, 1009, 1018
SfcI CTRYAG 1 cut(s) 942
SfoI GGCGCC 1 cut(s) 962
Sfr274I CTCGAG 1 cut(s) 175
SinI GGWCC 1 cut(s) 1097
SlaI CTCGAG 1 cut(s) 175
SmiMI CAYNNNNRTG 4 cut(s) 75, 276, 282, 927
SmlI CTYRAG 1 cut(s) 175
SmoI CTYRAG 1 cut(s) 175
Sse9I AATT 5 cut(s) 367, 546, 1014, 1083, 1109
SspDI GGCGCC 1 cut(s) 960
SspMI CTAG 3 cut(s) 90, 1011, 1159
StyD4I CCNGG 2 cut(s) 138, 602
StyI CCWWGG 2 cut(s) 114, 1092
TaaI ACNGT 1 cut(s) 1039
TaiI ACGT 1 cut(s) 135
TaqI TCGA 5 cut(s) 123, 176, 183, 862, 982
TasI AATT 5 cut(s) 367, 546, 1014, 1083, 1109
TatI WGTACW 1 cut(s) 294
TfiI GAWTC 1 cut(s) 987
Tru1I TTAA 6 cut(s) 339, 375, 426, 453, 720, 902
Tru9I TTAA 6 cut(s) 339, 375, 426, 453, 720, 902
TscAI CASTG 3 cut(s) 394, 598, 775
TseI GCWGC 2 cut(s) 329, 410
TspDTI ATGAA 4 cut(s) 270, 447, 510, 645
TspGWI ACGGA 1 cut(s) 32
TspRI CASTG 3 cut(s) 394, 598, 775
VpaK11BI GGWCC 1 cut(s) 1097
XceI RCATGY 1 cut(s) 281
XhoI CTCGAG 1 cut(s) 175
XspI CTAG 3 cut(s) 90, 1011, 1159
ZrmI AGTACT 1 cut(s) 296
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.