Rw3G010940

Domain of unknown function (DUF3527)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0008676
Physical Location & Seq
Reverse (-)
10517753 .. 10521921
4169 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G010940.1

Sequence Viewer

Length: 2283 bp
ATGCAAGCTGATGTAAGTCCACAAAATCAGTTCCCAGAACCTGCTGAGGATATGGGGTCCGTTTTAGAGCTTAAAAATAGCTCAAAACAGCAGAACAAGATTACCGCAGAGGACACTATTGTGCACCCCCAAGCGAATCGGAGAACAAATCATCAAGAAAAGGTGAAAGTGAGAGCTGGTGTTGGTTCGGCAGGAAAAGATGCTCATCGCAAAGCCAGACAAGATGGAACTGATAGTGTCTTGGTCCAAGAAAAATCTTTGGGAAATCTGAATAGGCAGAGTAGGAAGGAGAAAGCTGCCAAAGTTGATGAGCTTGTAAGGCACATGTCAAACTTGCCTGGTTATCTACAGCATCCTGAGAGAGGAGAAAAACTGGAAGAAAAGGTTTTGAATTTTGGAGTTCTAGATTGGTCTCGGCTAGAAAAATGGAAGCATAAGCAGAAGCATTCCCCAGGAAAAGGTAGCCATAATACACCTTTGGAAAATATTGCTGCAGCATCTATATCGTCTGGTCTTGTTCGACCTGCGTCACGTCCTGATCAACAGTCTCCGCGTTGTTCTAGTCTCAAGTCATCTCAAAAGGATGTCCTTTCTCAGGGTGTCAAACCTTCTGCTCAGAGTGTTGTCCGCTTCCAAGACTGTGAAACCCCTTCAAAGAATGGCACTAATGGGCAGAAGAAGATACCCTTCCCCAGCAGGTCTTTTGGTAGAAATCACTCCGATATAATGCTTGATAAGGGAAAGGGAAAGAGTTCAGCTCAGAGGATCAGTTCAGTAAGGGAAGCTGCACCAGGTTCAAAAAGTTATGGAGTCTCATTCGGTCAAAAGGAAGATGTGAGCAGTTGCGACAGTCAGGCCAAGAAGACAAAGGAGTTGCAAGAATCAGATATCAAGAGAAAGAATACTGATGAAACGATCATTTCAGAAACAGGATCTCATTCTTCAAAATCTCAAAGTTATGACGTCTTACTCAGTTCAAAGGGAAAGGCCATTGCTTGCGATGACAAAACTGAGAAAAGTGTGGAAGAGTTGCCAAAGTTAGATAGAAATCTAGCTCATCAGCCTTGTCCTGTTGAAGAGAATGACATTGTTCTCCTTCCGCCAAAGGCATTGCCCCAAAGTGGCTCTCCAAAAGTACTCCAGCTTTCAAAACCAAGAGCATCCTGTGATGTGCATTTGGCAGAAGCCAATAAGATTAGCTTCTCAGGTGACTTTTCTACCAGTGAGATGGACTTTGAAGAACAATATTCTGAAGTTCCACATTCATGCCCACTGCCTTCTGCAGGGAAAAGGCTTACCAGTTCAAGTTTCGATATATCCAAAACATTGGATCAAGAAGATGCTGAACTGTCAACTAGAAAAGGTAGACATCCATCACCCAATCGCCGATTTAGCTTCAGCTTGCCGCGGCTTGGTAGAAGTTTCAGTTTCAAGGAAAATGCAGCTGTACCACAGACAAGTTCCACATATATGACTGTCAAGTCAGGCCCTGTGAGACCCGAAACTTCTGATTGTTCAGATAATCCCAAGGGAGAGAAAACAAGTAGTCATAACAGAGCTAGGTCTAGCCCATTGAGAAGGTTGCTAGACCCAATACTGAAGCACAAGGAGGCAAATCCACTCCATTCTGCTGAAGCTGTTAAGGCTATGAAAGCAAATCTTAATACCTTCGTCCCTAGGCCAATTAATGTCAGTGAGTCGTTACAAAAAGAGAAGCGTGAGGCATCATCTGTCCAAGCATTGTTGCAGTTAACGATGAAGAATGGACTTCCTTTGTTTAAATTTTTGGTTGACAGGAGCAGCAACTGTTTTGTGGCAACCATGAAAAATTCATCTGAGAAGGATGATTTTGGCCAGAACTTTACATTTTACTGTGTGAATGAAATCAAGAGAAAAGTTGGCTGGATGAGTCAAGGAAGTAAAAGCAAAAGTTGTGGCTATGCATACAATGTTGTTGGTCAAATGAGGGTTTCAACCTCTGATTTGTCTGATGTTAATGGGCAGAACTTCTGCAAACATATAATAAGAGAGTCTGTTTTGTTTGGTATGGAGCTAAGACAGCAGGCAAATCAAGAAGCACCACAATTCATGCTAAATAGGGAGCTTGCTGCTGCTGTTGTCACGATACCCAGCAAAGATCTGAGCAATGAGGAAGCTATGGAGAAGGGCTGCACCAAGTGTTCACCAGAGCACGGATTGTCTTGCAACTGGGAAGACAGTAGTATAGTCATACTTCCAGGCGGCGTCATAGCTCACCAAACAAAGGAGAGCCTTCACCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3527

Protein Analysis

760

Amino Acids

83.85

Weight (kDa)

9.17

Isoelectric Point (pI)

55.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF3527 PF12043 577 - 720 1.4e-12 Domain of unknown function (DUF3527)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1480
AatII GACGTC 1 cut(s) 966
Acc36I ACCTGC 3 cut(s) 49, 532, 687
AccI GTMKAC 1 cut(s) 1366
AccII CGCG 2 cut(s) 553, 1408
AciI CCGC 7 cut(s) 105, 551, 628, 1100, 1406, 1408, 2241
AclWI GGATC 3 cut(s) 773, 940, 1338
AcoI YGGCCR 1 cut(s) 1852
AcsI RAATTY 3 cut(s) 391, 1781, 1828
AcuI CTGAAG 4 cut(s) 1272, 1381, 1619, 1653
AcyI GRCGYC 2 cut(s) 963, 2244
AdeI CACNNNGTG 1 cut(s) 2178
AfaI GTAC 2 cut(s) 1137, 1449
AfiI CCNNNNNNNGG 8 cut(s) 362, 458, 595, 1121, 1283, 1412, 2192, 2263
AflIII ACRYGT 1 cut(s) 324
AjiI CACGTC 1 cut(s) 533
AjnI CCWGG 4 cut(s) 337, 451, 790, 2236
AleI CACNNNNGTG 1 cut(s) 119
Alw21I GWGCWC 2 cut(s) 126, 2193
Alw26I GTCTC 5 cut(s) 417, 552, 569, 817, 1489
Alw44I GTGCAC 1 cut(s) 122
AlwI GGATC 3 cut(s) 773, 940, 1338
AlwNI CAGNNNCTG 3 cut(s) 41, 1490, 1806
AoxI GGCC 5 cut(s) 855, 987, 1486, 1679, 1852
ApaLI GTGCAC 1 cut(s) 122
ApeKI GCWGC 9 cut(s) 296, 491, 494, 785, 1442, 1800, 2108, 2111, 2169
ApoI RAATTY 3 cut(s) 391, 1781, 1828
AseI ATTAAT 1 cut(s) 1686
Asp700I GAANNNNTTC 1 cut(s) 751
AspA2I CCTAGG 1 cut(s) 1676
AspS9I GGNCC 3 cut(s) 57, 244, 1487
AsuHPI GGTGA 6 cut(s) 175, 1220, 1368, 2175, 2246, 2267
AvaII GGWCC 2 cut(s) 57, 244
AvrII CCTAGG 1 cut(s) 1676
BaeGI GKGCMC 1 cut(s) 126
BalI TGGCCA 1 cut(s) 1854
BbsI GAAGAC 2 cut(s) 869, 2220
Bbv12I GWGCWC 2 cut(s) 126, 2193
BbvCI CCTCAGC 1 cut(s) 45
BbvI GCAGC 9 cut(s) 283, 478, 506, 772, 1454, 1812, 2095, 2098, 2156
BccI CCATC 3 cut(s) 218, 1222, 1381
BcgI CGANNNNNNTGC 2 cut(s) 486, 520
BciT130I CCWGG 4 cut(s) 339, 453, 792, 2238
BclI TGATCA 1 cut(s) 538
BcoDI GTCTC 5 cut(s) 417, 552, 569, 817, 1489
BfaI CTAG 9 cut(s) 404, 419, 561, 1052, 1356, 1560, 1566, 1586, 1677
BfmI CTRYAG 3 cut(s) 347, 492, 1281
BfuAI ACCTGC 3 cut(s) 49, 532, 687
BglII AGATCT 1 cut(s) 2137
BlnI CCTAGG 1 cut(s) 1676
BmcAI AGTACT 1 cut(s) 1137
Bme1390I CCNGG 4 cut(s) 339, 453, 792, 2238
Bme18I GGWCC 2 cut(s) 57, 244
BmgBI CACGTC 1 cut(s) 533
BmgT120I GGNCC 3 cut(s) 57, 244, 1487
BmiI GGNNCC 1 cut(s) 58
BmrFI CCNGG 4 cut(s) 339, 453, 792, 2238
BmrI ACTGGG 1 cut(s) 2218
BmsI GCATC 6 cut(s) 190, 361, 506, 1169, 1330, 1733
BmuI ACTGGG 1 cut(s) 2218
BoxI GACNNNNGTC 1 cut(s) 526
BpiI GAAGAC 2 cut(s) 869, 2220
BplI GAGNNNNNCTC 2 cut(s) 742, 774
BpmI CTGGAG 1 cut(s) 1124
Bpu10I CCTNAGC 1 cut(s) 45
BpuEI CTTGAG 1 cut(s) 551
BsaBI GATNNNNATC 2 cut(s) 204, 1047
BsaHI GRCGYC 2 cut(s) 963, 2244
BsaI GGTCTC 2 cut(s) 417, 1489
BsaJI CCNNGG 4 cut(s) 451, 1406, 1527, 1676
Bsc4I CCNNNNNNNGG 8 cut(s) 362, 458, 595, 1121, 1283, 1412, 2192, 2263
Bse1I ACTGG 4 cut(s) 378, 1221, 1299, 2213
Bse3DI GCAATG 3 cut(s) 990, 1109, 2152
Bse8I GATNNNNATC 2 cut(s) 204, 1047
BseBI CCWGG 4 cut(s) 339, 453, 792, 2238
BseDI CCNNGG 4 cut(s) 451, 1406, 1527, 1676
BseGI GGATG 6 cut(s) 352, 589, 1160, 1369, 1849, 1911
BseJI GATNNNNATC 2 cut(s) 204, 1047
BseLI CCNNNNNNNGG 8 cut(s) 362, 458, 595, 1121, 1283, 1412, 2192, 2263
BseMI GCAATG 3 cut(s) 990, 1109, 2152
BseNI ACTGG 4 cut(s) 378, 1221, 1299, 2213
BseRI GAGGAG 1 cut(s) 378
BseSI GKGCMC 1 cut(s) 126
BseXI GCAGC 9 cut(s) 283, 478, 506, 772, 1454, 1812, 2095, 2098, 2156
BseYI CCCAGC 2 cut(s) 692, 2129
BsgI GTGCAG 2 cut(s) 771, 2155
Bsh1236I CGCG 2 cut(s) 553, 1408
BshFI GGCC 5 cut(s) 857, 989, 1488, 1681, 1854
BsiHKAI GWGCWC 2 cut(s) 126, 2193
BslFI GGGAC 1 cut(s) 1658
BslI CCNNNNNNNGG 8 cut(s) 362, 458, 595, 1121, 1283, 1412, 2192, 2263
BsmAI GTCTC 5 cut(s) 417, 552, 569, 817, 1489
BsmFI GGGAC 1 cut(s) 1658
BsmI GAATGC 1 cut(s) 445
BsnI GGCC 5 cut(s) 857, 989, 1488, 1681, 1854
Bso31I GGTCTC 2 cut(s) 417, 1489
Bsp1286I GDGCHC 2 cut(s) 126, 2193
Bsp143I GATC 6 cut(s) 538, 765, 915, 932, 1330, 2137
BspACI CCGC 7 cut(s) 105, 551, 628, 1100, 1406, 1408, 2241
BspANI GGCC 5 cut(s) 857, 989, 1488, 1681, 1854
BspFNI CGCG 2 cut(s) 553, 1408
BspLI GGNNCC 1 cut(s) 58
BspMAI CTGCAG 2 cut(s) 496, 1285
BspMI ACCTGC 3 cut(s) 49, 532, 687
BspPI GGATC 3 cut(s) 773, 940, 1338
BspTNI GGTCTC 2 cut(s) 417, 1489
BsrDI GCAATG 3 cut(s) 990, 1109, 2152
BsrI ACTGG 4 cut(s) 378, 1221, 1299, 2213
BssECI CCNNGG 4 cut(s) 451, 1406, 1527, 1676
BssMI GATC 6 cut(s) 538, 765, 915, 932, 1330, 2137
BssNI GRCGYC 2 cut(s) 963, 2244
BssT1I CCWWGG 2 cut(s) 1527, 1676
Bst2UI CCWGG 4 cut(s) 339, 453, 792, 2238
Bst4CI ACNGT 8 cut(s) 546, 641, 851, 1350, 1477, 1808, 1874, 2219
Bst6I CTCTTC 2 cut(s) 1020, 1071
BstACI GRCGYC 2 cut(s) 963, 2244
BstC8I GCNNGC 5 cut(s) 6, 997, 1403, 2064, 2106
BstDSI CCRYGG 1 cut(s) 1406
BstENI CCTNNNNNAGG 3 cut(s) 360, 593, 1281
BstF5I GGATG 6 cut(s) 352, 589, 1160, 1369, 1849, 1911
BstFNI CGCG 2 cut(s) 553, 1408
BstKTI GATC 6 cut(s) 541, 768, 918, 935, 1333, 2140
BstMAI GTCTC 5 cut(s) 417, 552, 569, 817, 1489
BstMBI GATC 6 cut(s) 538, 765, 915, 932, 1330, 2137
BstMWI GCNNNNNNNGC 5 cut(s) 319, 1392, 1643, 1652, 2059
BstNI CCWGG 4 cut(s) 339, 453, 792, 2238
BstNSI RCATGY 1 cut(s) 328
BstPAI GACNNNNGTC 1 cut(s) 526
BstSCI CCNGG 4 cut(s) 337, 451, 790, 2236
BstSFI CTRYAG 3 cut(s) 347, 492, 1281
BstSLI GKGCMC 1 cut(s) 126
BstUI CGCG 2 cut(s) 553, 1408
BstV1I GCAGC 9 cut(s) 283, 478, 506, 772, 1454, 1812, 2095, 2098, 2156
BstV2I GAAGAC 2 cut(s) 869, 2220
BstX2I RGATCY 2 cut(s) 932, 2137
BstXI CCANNNNNNTGG 2 cut(s) 1228, 1327
BstYI RGATCY 2 cut(s) 932, 2137
BsuRI GGCC 5 cut(s) 857, 989, 1488, 1681, 1854
BtgI CCRYGG 1 cut(s) 1406
BtgZI GCGATG 2 cut(s) 191, 1014
BtrI CACGTC 1 cut(s) 533
BtsCI GGATG 6 cut(s) 352, 589, 1160, 1369, 1849, 1911
BtsI GCAGTG 1 cut(s) 1271
BtsIMutI CAGTG 3 cut(s) 1228, 1271, 1699
BveI ACCTGC 3 cut(s) 49, 532, 687
Cac8I GCNNGC 5 cut(s) 6, 997, 1403, 2064, 2106
CaiI CAGNNNCTG 3 cut(s) 41, 1490, 1806
Cfr13I GGNCC 3 cut(s) 57, 244, 1487
Cfr42I CCGCGG 1 cut(s) 1409
CseI GACGC 2 cut(s) 516, 2233
CsiI ACCWGGT 1 cut(s) 790
Csp6I GTAC 2 cut(s) 1136, 1448
CspCI CAANNNNNGTGG 2 cut(s) 1915, 1950
CviAII CATG 4 cut(s) 325, 1266, 1822, 2089
CviQI GTAC 2 cut(s) 1136, 1448
DpnI GATC 6 cut(s) 540, 767, 917, 934, 1332, 2139
DpnII GATC 6 cut(s) 538, 765, 915, 932, 1330, 2137
DraI TTTAAA 1 cut(s) 1780
DraIII CACNNNGTG 1 cut(s) 2178
DrdI GACNNNNNNGTC 1 cut(s) 1480
DseDI GACNNNNNNGTC 1 cut(s) 1480
EaeI YGGCCR 1 cut(s) 1852
Eam1104I CTCTTC 2 cut(s) 1020, 1071
EarI CTCTTC 2 cut(s) 1020, 1071
EciI GGCGGA 1 cut(s) 1089
Eco130I CCWWGG 2 cut(s) 1527, 1676
Eco31I GGTCTC 2 cut(s) 417, 1489
Eco32I GATATC 1 cut(s) 889
Eco47I GGWCC 2 cut(s) 57, 244
Eco57I CTGAAG 4 cut(s) 1272, 1381, 1619, 1653
EcoNI CCTNNNNNAGG 3 cut(s) 360, 593, 1281
EcoO109I RGGNCCY 1 cut(s) 1487
EcoRII CCWGG 4 cut(s) 337, 451, 790, 2236
EcoRV GATATC 1 cut(s) 889
EcoT14I CCWWGG 2 cut(s) 1527, 1676
EcoT22I ATGCAT 1 cut(s) 1945
ErhI CCWWGG 2 cut(s) 1527, 1676
FaeI CATG 4 cut(s) 328, 1269, 1825, 2092
FalI AAGNNNNNCTT 6 cut(s) 671, 703, 1184, 1216, 1644, 1676
FaqI GGGAC 1 cut(s) 1658
FatI CATG 4 cut(s) 324, 1265, 1821, 2088
FbaI TGATCA 1 cut(s) 538
FblI GTMKAC 1 cut(s) 1366
FokI GGATG 6 cut(s) 339, 596, 1147, 1356, 1856, 1918
FspBI CTAG 9 cut(s) 404, 419, 561, 1052, 1356, 1560, 1566, 1586, 1677
GsaI CCCAGC 2 cut(s) 696, 2133
GsuI CTGGAG 1 cut(s) 1124
HaeIII GGCC 5 cut(s) 857, 989, 1488, 1681, 1854
HgaI GACGC 2 cut(s) 516, 2233
Hin1I GRCGYC 2 cut(s) 963, 2244
Hin1II CATG 4 cut(s) 328, 1269, 1825, 2092
HincII GTYRAC 3 cut(s) 1353, 1752, 1792
HindII GTYRAC 3 cut(s) 1353, 1752, 1792
HinfI GANTC 6 cut(s) 136, 810, 881, 1697, 1909, 2030
HpaI GTTAAC 1 cut(s) 1752
HphI GGTGA 6 cut(s) 175, 1220, 1368, 2175, 2246, 2267
Hpy166II GTNNAC 7 cut(s) 20, 124, 1353, 1367, 1752, 1792, 2183
Hpy188III TCNNGA 9 cut(s) 155, 356, 404, 536, 892, 1334, 1888, 2072, 2122
Hpy8I GTNNAC 7 cut(s) 20, 124, 1353, 1367, 1752, 1792, 2183
HpyCH4III ACNGT 8 cut(s) 546, 641, 851, 1350, 1477, 1808, 1874, 2219
HpyCH4IV ACGT 2 cut(s) 532, 963
HpyF10VI GCNNNNNNNGC 5 cut(s) 319, 1392, 1643, 1652, 2059
HpySE526I ACGT 2 cut(s) 532, 963
Hsp92I GRCGYC 2 cut(s) 963, 2244
Hsp92II CATG 4 cut(s) 328, 1269, 1825, 2092
Ksp22I TGATCA 1 cut(s) 538
KspAI GTTAAC 1 cut(s) 1752
KspI CCGCGG 1 cut(s) 1409
Kzo9I GATC 6 cut(s) 538, 765, 915, 932, 1330, 2137
LmnI GCTCC 3 cut(s) 1797, 2050, 2101
Lsp1109I GCAGC 9 cut(s) 283, 478, 506, 772, 1454, 1812, 2095, 2098, 2156
LweI GCATC 6 cut(s) 190, 361, 506, 1169, 1330, 1733
MabI ACCWGGT 1 cut(s) 790
MaeI CTAG 9 cut(s) 404, 419, 561, 1052, 1356, 1560, 1566, 1586, 1677
MaeII ACGT 2 cut(s) 532, 963
MaeIII GTNAC 4 cut(s) 528, 1208, 1701, 2119
MalI GATC 6 cut(s) 540, 767, 917, 934, 1332, 2139
MboI GATC 6 cut(s) 538, 765, 915, 932, 1330, 2137
MflI RGATCY 2 cut(s) 932, 2137
MhlI GDGCHC 2 cut(s) 126, 2193
MlsI TGGCCA 1 cut(s) 1854
MluCI AATT 5 cut(s) 391, 1683, 1781, 1828, 2084
MluNI TGGCCA 1 cut(s) 1854
MlyI GAGTC 4 cut(s) 819, 1706, 1918, 2039
MnlI CCTC 9 cut(s) 40, 103, 356, 756, 1603, 1714, 1959, 1987, 2143
Mox20I TGGCCA 1 cut(s) 1854
Mph1103I ATGCAT 1 cut(s) 1945
MroXI GAANNNNTTC 1 cut(s) 751
MscI TGGCCA 1 cut(s) 1854
MseI TTAA 8 cut(s) 72, 1641, 1662, 1686, 1751, 1779, 1995, 2281
MslI CAYNNNNRTG 3 cut(s) 119, 1264, 1469
Msp20I TGGCCA 1 cut(s) 1854
MspA1I CMGCKG 2 cut(s) 1408, 1445
MspR9I CCNGG 4 cut(s) 339, 453, 792, 2238
Mva1269I GAATGC 1 cut(s) 445
MvaI CCWGG 4 cut(s) 339, 453, 792, 2238
MvnI CGCG 2 cut(s) 553, 1408
MwoI GCNNNNNNNGC 5 cut(s) 319, 1392, 1643, 1652, 2059
NdeII GATC 6 cut(s) 538, 765, 915, 932, 1330, 2137
NlaIII CATG 4 cut(s) 328, 1269, 1825, 2092
NlaIV GGNNCC 1 cut(s) 58
NmeAIII GCCGAG 1 cut(s) 394
NmuCI GTSAC 3 cut(s) 528, 1208, 2119
NsiI ATGCAT 1 cut(s) 1945
NspI RCATGY 1 cut(s) 328
OliI CACNNNNGTG 1 cut(s) 119
PciI ACATGT 1 cut(s) 324
PctI GAATGC 1 cut(s) 445
PdmI GAANNNNTTC 1 cut(s) 751
PfeI GAWTC 2 cut(s) 136, 881
PleI GAGTC 4 cut(s) 818, 1705, 1917, 2038
PpsI GAGTC 4 cut(s) 818, 1705, 1917, 2038
PscI ACATGT 1 cut(s) 324
PshAI GACNNNNGTC 1 cut(s) 526
PshBI ATTAAT 1 cut(s) 1686
Psp6I CCWGG 4 cut(s) 337, 451, 790, 2236
PspFI CCCAGC 2 cut(s) 692, 2129
PspGI CCWGG 4 cut(s) 337, 451, 790, 2236
PspN4I GGNNCC 1 cut(s) 58
PspPI GGNCC 3 cut(s) 57, 244, 1487
PstI CTGCAG 2 cut(s) 496, 1285
PstNI CAGNNNCTG 3 cut(s) 41, 1490, 1806
PsuI RGATCY 2 cut(s) 932, 2137
PvuII CAGCTG 1 cut(s) 1445
RsaI GTAC 2 cut(s) 1137, 1449
RsaNI GTAC 2 cut(s) 1136, 1448
RseI CAYNNNNRTG 3 cut(s) 119, 1264, 1469
SacII CCGCGG 1 cut(s) 1409
SaqAI TTAA 8 cut(s) 72, 1641, 1662, 1686, 1751, 1779, 1995, 2281
Sau3AI GATC 6 cut(s) 538, 765, 915, 932, 1330, 2137
Sau96I GGNCC 3 cut(s) 57, 244, 1487
ScaI AGTACT 1 cut(s) 1137
SchI GAGTC 4 cut(s) 819, 1706, 1918, 2039
ScrFI CCNGG 4 cut(s) 339, 453, 792, 2238
SduI GDGCHC 2 cut(s) 126, 2193
SexAI ACCWGGT 1 cut(s) 790
SfaNI GCATC 6 cut(s) 190, 361, 506, 1169, 1330, 1733
SfcI CTRYAG 3 cut(s) 347, 492, 1281
Sfr303I CCGCGG 1 cut(s) 1409
SgrBI CCGCGG 1 cut(s) 1409
SinI GGWCC 2 cut(s) 57, 244
SmiMI CAYNNNNRTG 3 cut(s) 119, 1264, 1469
SmlI CTYRAG 1 cut(s) 566
SmoI CTYRAG 1 cut(s) 566
Sse9I AATT 5 cut(s) 391, 1683, 1781, 1828, 2084
SsiI CCGC 7 cut(s) 105, 551, 628, 1100, 1406, 1408, 2241
SspI AATATT 2 cut(s) 487, 1247
SspMI CTAG 9 cut(s) 404, 419, 561, 1052, 1356, 1560, 1566, 1586, 1677
StyD4I CCNGG 4 cut(s) 337, 451, 790, 2236
StyI CCWWGG 2 cut(s) 1527, 1676
TaaI ACNGT 8 cut(s) 546, 641, 851, 1350, 1477, 1808, 1874, 2219
TaiI ACGT 2 cut(s) 535, 966
TaqI TCGA 2 cut(s) 520, 1311
TaqII GACCGA 1 cut(s) 809
TasI AATT 5 cut(s) 391, 1683, 1781, 1828, 2084
TatI WGTACW 1 cut(s) 1135
TauI GCSGC 3 cut(s) 1408, 1411, 2244
TfiI GAWTC 2 cut(s) 136, 881
Tru1I TTAA 8 cut(s) 72, 1641, 1662, 1686, 1751, 1779, 1995, 2281
Tru9I TTAA 8 cut(s) 72, 1641, 1662, 1686, 1751, 1779, 1995, 2281
TscAI CASTG 3 cut(s) 1228, 1278, 1699
TseFI GTSAC 3 cut(s) 528, 1208, 2119
TseI GCWGC 9 cut(s) 296, 491, 494, 785, 1442, 1800, 2108, 2111, 2169
Tsp45I GTSAC 3 cut(s) 528, 1208, 2119
TspDTI ATGAA 8 cut(s) 924, 1254, 1664, 1772, 1821, 1838, 1896, 2077
TspGWI ACGGA 2 cut(s) 49, 2208
TspRI CASTG 3 cut(s) 1228, 1278, 1699
VneI GTGCAC 1 cut(s) 122
VpaK11BI GGWCC 2 cut(s) 57, 244
VspI ATTAAT 1 cut(s) 1686
XagI CCTNNNNNAGG 3 cut(s) 360, 593, 1281
XapI RAATTY 3 cut(s) 391, 1781, 1828
XbaI TCTAGA 1 cut(s) 403
XceI RCATGY 1 cut(s) 328
XmaJI CCTAGG 1 cut(s) 1676
XmiI GTMKAC 1 cut(s) 1366
XmnI GAANNNNTTC 1 cut(s) 751
XspI CTAG 9 cut(s) 404, 419, 561, 1052, 1356, 1560, 1566, 1586, 1677
ZraI GACGTC 1 cut(s) 964
ZrmI AGTACT 1 cut(s) 1137
Zsp2I ATGCAT 1 cut(s) 1945
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.