Cyclin-dependent kinase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g16880 FvH4_3g16880 FvH4_3g16880 |
| rosa_chinensis | RchiOBHm_Chr5g0006861 RchiOBHm_Chr5g0028131 |
| rosa_laevigata | RLG00000031435 RLG00000033069 |
| rosa_multiflora | Rmu_co8357761.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00051560 Rroxscaffold_1G00069190 |
| rosa_rugosa | Rorug04G0425200 Rorug05G0104400 |
| rosa_samantha | Rh5AG197500 Rh5BG051800 Rh5BG196100 Rh5CG216100 Rh5DG197800 |
| rosa_wichuraiana | Rw5G018040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 488 |
| AccI | GTMKAC | 1 cut(s) | 982 |
| AccII | CGCG | 1 cut(s) | 1104 |
| AciI | CCGC | 7 cut(s) | 11, 48, 627, 1102, 1104, 1213, 1327 |
| AclWI | GGATC | 4 cut(s) | 223, 893, 950, 965 |
| AcoI | YGGCCR | 3 cut(s) | 91, 679, 683 |
| AcsI | RAATTY | 1 cut(s) | 294 |
| AcuI | CTGAAG | 2 cut(s) | 185, 1278 |
| AfaI | GTAC | 1 cut(s) | 1085 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 868, 1245, 1256 |
| AgeI | ACCGGT | 1 cut(s) | 1075 |
| AgsI | TTSAA | 5 cut(s) | 268, 335, 421, 508, 805 |
| AjnI | CCWGG | 2 cut(s) | 93, 766 |
| Alw26I | GTCTC | 3 cut(s) | 51, 833, 1209 |
| AlwI | GGATC | 4 cut(s) | 223, 893, 950, 965 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 710, 852, 1196 |
| Ama87I | CYCGRG | 1 cut(s) | 1149 |
| ApeKI | GCWGC | 5 cut(s) | 22, 1030, 1033, 1058, 1196 |
| ApoI | RAATTY | 1 cut(s) | 294 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 286, 318 |
| AseI | ATTAAT | 1 cut(s) | 207 |
| AsiGI | ACCGGT | 1 cut(s) | 1075 |
| AspLEI | GCGC | 1 cut(s) | 16 |
| AspS9I | GGNCC | 5 cut(s) | 135, 343, 623, 1167, 1236 |
| AsuC2I | CCSGG | 3 cut(s) | 45, 300, 532 |
| AsuHPI | GGTGA | 2 cut(s) | 326, 385 |
| AvaI | CYCGRG | 1 cut(s) | 1149 |
| AvaII | GGWCC | 3 cut(s) | 135, 343, 623 |
| BaeGI | GKGCMC | 1 cut(s) | 101 |
| BalI | TGGCCA | 1 cut(s) | 93 |
| BbvCI | CCTCAGC | 1 cut(s) | 819 |
| BbvI | GCAGC | 5 cut(s) | 34, 1042, 1045, 1045, 1183 |
| BccI | CCATC | 3 cut(s) | 689, 1250, 1338 |
| BceAI | ACGGC | 1 cut(s) | 694 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 43, 77 |
| BciT130I | CCWGG | 2 cut(s) | 95, 768 |
| BclI | TGATCA | 1 cut(s) | 258 |
| BcnI | CCSGG | 3 cut(s) | 45, 300, 532 |
| BcoDI | GTCTC | 3 cut(s) | 51, 833, 1209 |
| BfaI | CTAG | 3 cut(s) | 362, 932, 1342 |
| BfoI | RGCGCY | 1 cut(s) | 17 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1234 |
| BisI | GCNGC | 8 cut(s) | 12, 23, 1031, 1034, 1059, 1105, 1197, 1327 |
| BlpI | GCTNAGC | 1 cut(s) | 663 |
| BlsI | GCNGC | 8 cut(s) | 13, 24, 1032, 1035, 1060, 1106, 1198, 1328 |
| Bme1390I | CCNGG | 5 cut(s) | 45, 95, 300, 532, 768 |
| Bme18I | GGWCC | 3 cut(s) | 135, 343, 623 |
| BmeT110I | CYCGRG | 1 cut(s) | 1149 |
| BmgT120I | GGNCC | 5 cut(s) | 135, 343, 623, 1167, 1236 |
| BmiI | GGNNCC | 2 cut(s) | 625, 1238 |
| BmrFI | CCNGG | 5 cut(s) | 45, 95, 300, 532, 768 |
| BmrI | ACTGGG | 1 cut(s) | 1113 |
| BmsI | GCATC | 4 cut(s) | 41, 298, 916, 925 |
| BmuI | ACTGGG | 1 cut(s) | 1113 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1213, 1245 |
| BpmI | CTGGAG | 2 cut(s) | 576, 789 |
| Bpu10I | CCTNAGC | 1 cut(s) | 819 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 663 |
| BpuMI | CCSGG | 3 cut(s) | 45, 300, 532 |
| BsaI | GGTCTC | 1 cut(s) | 1209 |
| BsaJI | CCNNGG | 7 cut(s) | 43, 94, 676, 921, 1102, 1232, 1244 |
| BsaWI | WCCGGW | 3 cut(s) | 137, 286, 1075 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 132, 162, 1255, 1285 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 868, 1245, 1256 |
| Bse118I | RCCGGY | 4 cut(s) | 311, 681, 1075, 1164 |
| Bse1I | ACTGG | 3 cut(s) | 767, 1119, 1190 |
| Bse3DI | GCAATG | 2 cut(s) | 816, 1037 |
| BseBI | CCWGG | 2 cut(s) | 95, 768 |
| BseDI | CCNNGG | 7 cut(s) | 43, 94, 676, 921, 1102, 1232, 1244 |
| BseGI | GGATG | 4 cut(s) | 56, 656, 931, 1096 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 868, 1245, 1256 |
| BseMI | GCAATG | 2 cut(s) | 816, 1037 |
| BseMII | CTCAG | 4 cut(s) | 224, 654, 833, 1196 |
| BseNI | ACTGG | 3 cut(s) | 767, 1119, 1190 |
| BseRI | GAGGAG | 3 cut(s) | 1221, 1233, 1330 |
| BseSI | GKGCMC | 1 cut(s) | 101 |
| BseX3I | CGGCCG | 1 cut(s) | 679 |
| BseXI | GCAGC | 5 cut(s) | 34, 1042, 1045, 1045, 1183 |
| BseYI | CCCAGC | 2 cut(s) | 169, 1169 |
| BsgI | GTGCAG | 1 cut(s) | 1100 |
| Bsh1236I | CGCG | 1 cut(s) | 1104 |
| Bsh1285I | CGRYCG | 1 cut(s) | 682 |
| BshTI | ACCGGT | 1 cut(s) | 1075 |
| BsiEI | CGRYCG | 1 cut(s) | 682 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1149 |
| BsiSI | CCGG | 9 cut(s) | 45, 138, 287, 299, 312, 532, 682, 1076, 1165 |
| BslFI | GGGAC | 4 cut(s) | 26, 371, 609, 1316 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 868, 1245, 1256 |
| BsmAI | GTCTC | 3 cut(s) | 51, 833, 1209 |
| BsmFI | GGGAC | 4 cut(s) | 26, 371, 609, 1316 |
| BsmI | GAATGC | 1 cut(s) | 1107 |
| Bso31I | GGTCTC | 1 cut(s) | 1209 |
| BsoBI | CYCGRG | 1 cut(s) | 1149 |
| Bsp1286I | GDGCHC | 1 cut(s) | 101 |
| Bsp143I | GATC | 6 cut(s) | 228, 258, 898, 955, 970, 1282 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 663 |
| BspACI | CCGC | 7 cut(s) | 11, 48, 627, 1102, 1104, 1213, 1327 |
| BspCNI | CTCAG | 4 cut(s) | 225, 655, 832, 1195 |
| BspFNI | CGCG | 1 cut(s) | 1104 |
| BspHI | TCATGA | 1 cut(s) | 304 |
| BspLI | GGNNCC | 2 cut(s) | 625, 1238 |
| BspPI | GGATC | 4 cut(s) | 223, 893, 950, 965 |
| BspTNI | GGTCTC | 1 cut(s) | 1209 |
| BsrDI | GCAATG | 2 cut(s) | 816, 1037 |
| BsrFI | RCCGGY | 4 cut(s) | 311, 681, 1075, 1164 |
| BsrI | ACTGG | 3 cut(s) | 767, 1119, 1190 |
| BssAI | RCCGGY | 4 cut(s) | 311, 681, 1075, 1164 |
| BssECI | CCNNGG | 7 cut(s) | 43, 94, 676, 921, 1102, 1232, 1244 |
| BssMI | GATC | 6 cut(s) | 228, 258, 898, 955, 970, 1282 |
| BssT1I | CCWWGG | 1 cut(s) | 921 |
| Bst2UI | CCWGG | 2 cut(s) | 95, 768 |
| Bst4CI | ACNGT | 1 cut(s) | 854 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1039 |
| BstC8I | GCNNGC | 2 cut(s) | 528, 683 |
| BstDEI | CTNAG | 6 cut(s) | 233, 663, 819, 833, 906, 1182 |
| BstDSI | CCRYGG | 2 cut(s) | 676, 1102 |
| BstF5I | GGATG | 4 cut(s) | 56, 656, 931, 1096 |
| BstFNI | CGCG | 1 cut(s) | 1104 |
| BstH2I | RGCGCY | 1 cut(s) | 17 |
| BstHHI | GCGC | 1 cut(s) | 16 |
| BstKTI | GATC | 6 cut(s) | 231, 261, 901, 958, 973, 1285 |
| BstMAI | GTCTC | 3 cut(s) | 51, 833, 1209 |
| BstMBI | GATC | 6 cut(s) | 228, 258, 898, 955, 970, 1282 |
| BstMCI | CGRYCG | 1 cut(s) | 682 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 11, 22, 105, 408, 926, 935, 1030, 1039, 1234 |
| BstNI | CCWGG | 2 cut(s) | 95, 768 |
| BstSCI | CCNGG | 5 cut(s) | 43, 93, 298, 530, 766 |
| BstSLI | GKGCMC | 1 cut(s) | 101 |
| BstUI | CGCG | 1 cut(s) | 1104 |
| BstV1I | GCAGC | 5 cut(s) | 34, 1042, 1045, 1045, 1183 |
| BstX2I | RGATCY | 1 cut(s) | 228 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 446 |
| BstYI | RGATCY | 1 cut(s) | 228 |
| BstZI | CGGCCG | 1 cut(s) | 679 |
| BtgI | CCRYGG | 2 cut(s) | 676, 1102 |
| BtsCI | GGATG | 4 cut(s) | 56, 656, 931, 1096 |
| BtsIMutI | CAGTG | 1 cut(s) | 850 |
| Cac8I | GCNNGC | 2 cut(s) | 528, 683 |
| CaiI | CAGNNNCTG | 3 cut(s) | 710, 852, 1196 |
| CciI | TCATGA | 1 cut(s) | 304 |
| CfoI | GCGC | 1 cut(s) | 16 |
| Cfr10I | RCCGGY | 4 cut(s) | 311, 681, 1075, 1164 |
| Cfr13I | GGNCC | 5 cut(s) | 135, 343, 623, 1167, 1236 |
| Cfr42I | CCGCGG | 1 cut(s) | 1105 |
| CseI | GACGC | 1 cut(s) | 1055 |
| Csp6I | GTAC | 1 cut(s) | 1084 |
| CspAI | ACCGGT | 1 cut(s) | 1075 |
| CviAII | CATG | 8 cut(s) | 305, 340, 347, 406, 440, 1004, 1200, 1312 |
| CviQI | GTAC | 1 cut(s) | 1084 |
| DdeI | CTNAG | 6 cut(s) | 233, 663, 819, 833, 906, 1182 |
| DpnI | GATC | 6 cut(s) | 230, 260, 900, 957, 972, 1284 |
| DpnII | GATC | 6 cut(s) | 228, 258, 898, 955, 970, 1282 |
| DraI | TTTAAA | 1 cut(s) | 156 |
| EaeI | YGGCCR | 3 cut(s) | 91, 679, 683 |
| EagI | CGGCCG | 1 cut(s) | 679 |
| EciI | GGCGGA | 1 cut(s) | 63 |
| EclXI | CGGCCG | 1 cut(s) | 679 |
| Eco130I | CCWWGG | 1 cut(s) | 921 |
| Eco147I | AGGCCT | 3 cut(s) | 360, 829, 1228 |
| Eco31I | GGTCTC | 1 cut(s) | 1209 |
| Eco32I | GATATC | 1 cut(s) | 466 |
| Eco47I | GGWCC | 3 cut(s) | 135, 343, 623 |
| Eco52I | CGGCCG | 1 cut(s) | 679 |
| Eco57I | CTGAAG | 2 cut(s) | 185, 1278 |
| Eco88I | CYCGRG | 1 cut(s) | 1149 |
| EcoRI | GAATTC | 1 cut(s) | 294 |
| EcoRII | CCWGG | 2 cut(s) | 93, 766 |
| EcoRV | GATATC | 1 cut(s) | 466 |
| EcoT14I | CCWWGG | 1 cut(s) | 921 |
| ErhI | CCWWGG | 1 cut(s) | 921 |
| FaeI | CATG | 8 cut(s) | 308, 343, 350, 409, 443, 1007, 1203, 1315 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 182, 214 |
| FaqI | GGGAC | 4 cut(s) | 26, 371, 609, 1316 |
| FatI | CATG | 8 cut(s) | 304, 339, 346, 405, 439, 1003, 1199, 1311 |
| FauI | CCCGC | 2 cut(s) | 634, 1109 |
| FbaI | TGATCA | 1 cut(s) | 258 |
| FblI | GTMKAC | 1 cut(s) | 982 |
| Fnu4HI | GCNGC | 8 cut(s) | 12, 23, 1031, 1034, 1059, 1105, 1197, 1327 |
| FokI | GGATG | 4 cut(s) | 63, 663, 938, 1083 |
| FseI | GGCCGGCC | 1 cut(s) | 685 |
| Fsp4HI | GCNGC | 8 cut(s) | 12, 23, 1031, 1034, 1059, 1105, 1197, 1327 |
| FspBI | CTAG | 3 cut(s) | 362, 932, 1342 |
| GlaI | GCGC | 1 cut(s) | 15 |
| GluI | GCNGC | 8 cut(s) | 12, 23, 1031, 1034, 1059, 1105, 1197, 1327 |
| GsaI | CCCAGC | 2 cut(s) | 173, 1173 |
| GsuI | CTGGAG | 2 cut(s) | 576, 789 |
| HaeII | RGCGCY | 1 cut(s) | 17 |
| HapII | CCGG | 9 cut(s) | 45, 138, 287, 299, 312, 532, 682, 1076, 1165 |
| HgaI | GACGC | 1 cut(s) | 1055 |
| HhaI | GCGC | 1 cut(s) | 16 |
| Hin1II | CATG | 8 cut(s) | 308, 343, 350, 409, 443, 1007, 1203, 1315 |
| Hin6I | GCGC | 1 cut(s) | 14 |
| HinP1I | GCGC | 1 cut(s) | 14 |
| HincII | GTYRAC | 1 cut(s) | 760 |
| HindII | GTYRAC | 1 cut(s) | 760 |
| HindIII | AAGCTT | 3 cut(s) | 239, 509, 554 |
| HinfI | GANTC | 4 cut(s) | 65, 478, 995, 1304 |
| HpaII | CCGG | 9 cut(s) | 45, 138, 287, 299, 312, 532, 682, 1076, 1165 |
| HphI | GGTGA | 2 cut(s) | 326, 385 |
| Hpy166II | GTNNAC | 2 cut(s) | 760, 983 |
| Hpy188I | TCNGA | 6 cut(s) | 778, 848, 975, 1071, 1255, 1278 |
| Hpy8I | GTNNAC | 2 cut(s) | 760, 983 |
| HpyAV | CCTTC | 9 cut(s) | 79, 184, 188, 262, 415, 491, 799, 912, 1260 |
| HpyCH4III | ACNGT | 1 cut(s) | 854 |
| HpyCH4V | TGCA | 6 cut(s) | 54, 212, 1042, 1061, 1081, 1199 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 11, 22, 105, 408, 926, 935, 1030, 1039, 1234 |
| HpyF3I | CTNAG | 6 cut(s) | 233, 663, 819, 833, 906, 1182 |
| Hsp92II | CATG | 8 cut(s) | 308, 343, 350, 409, 443, 1007, 1203, 1315 |
| HspAI | GCGC | 1 cut(s) | 14 |
| KroI | GCCGGC | 1 cut(s) | 681 |
| KroNI | GCCGGC | 1 cut(s) | 683 |
| Ksp22I | TGATCA | 1 cut(s) | 258 |
| KspI | CCGCGG | 1 cut(s) | 1105 |
| Kzo9I | GATC | 6 cut(s) | 228, 258, 898, 955, 970, 1282 |
| Lsp1109I | GCAGC | 5 cut(s) | 34, 1042, 1045, 1045, 1183 |
| LweI | GCATC | 4 cut(s) | 41, 298, 916, 925 |
| MaeI | CTAG | 3 cut(s) | 362, 932, 1342 |
| MaeIII | GTNAC | 6 cut(s) | 245, 277, 314, 571, 854, 1337 |
| MalI | GATC | 6 cut(s) | 230, 260, 900, 957, 972, 1284 |
| MboI | GATC | 6 cut(s) | 228, 258, 898, 955, 970, 1282 |
| MboII | GAAGA | 2 cut(s) | 473, 1278 |
| MflI | RGATCY | 1 cut(s) | 228 |
| MhlI | GDGCHC | 1 cut(s) | 101 |
| MlsI | TGGCCA | 1 cut(s) | 93 |
| MluCI | AATT | 5 cut(s) | 144, 181, 294, 687, 884 |
| MluNI | TGGCCA | 1 cut(s) | 93 |
| MlyI | GAGTC | 2 cut(s) | 1004, 1298 |
| MmeI | TCCRAC | 2 cut(s) | 858, 1136 |
| Mox20I | TGGCCA | 1 cut(s) | 93 |
| MroNI | GCCGGC | 1 cut(s) | 681 |
| MscI | TGGCCA | 1 cut(s) | 93 |
| MseI | TTAA | 4 cut(s) | 155, 207, 366, 396 |
| MslI | CAYNNNNRTG | 4 cut(s) | 252, 323, 444, 1215 |
| Msp20I | TGGCCA | 1 cut(s) | 93 |
| MspA1I | CMGCKG | 2 cut(s) | 629, 1104 |
| MspI | CCGG | 9 cut(s) | 45, 138, 287, 299, 312, 532, 682, 1076, 1165 |
| MspR9I | CCNGG | 5 cut(s) | 45, 95, 300, 532, 768 |
| Mva1269I | GAATGC | 1 cut(s) | 1107 |
| MvaI | CCWGG | 2 cut(s) | 95, 768 |
| MvnI | CGCG | 1 cut(s) | 1104 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 11, 22, 105, 408, 926, 935, 1030, 1039, 1234 |
| NaeI | GCCGGC | 1 cut(s) | 683 |
| NciI | CCSGG | 3 cut(s) | 45, 300, 532 |
| NdeII | GATC | 6 cut(s) | 228, 258, 898, 955, 970, 1282 |
| NgoMIV | GCCGGC | 1 cut(s) | 681 |
| NlaIII | CATG | 8 cut(s) | 308, 343, 350, 409, 443, 1007, 1203, 1315 |
| NlaIV | GGNNCC | 2 cut(s) | 625, 1238 |
| NmeAIII | GCCGAG | 2 cut(s) | 1213, 1225 |
| NmuCI | GTSAC | 5 cut(s) | 245, 277, 314, 571, 854 |
| PagI | TCATGA | 1 cut(s) | 304 |
| PceI | AGGCCT | 3 cut(s) | 360, 829, 1228 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 69 |
| PctI | GAATGC | 1 cut(s) | 1107 |
| PdiI | GCCGGC | 1 cut(s) | 683 |
| PfeI | GAWTC | 2 cut(s) | 65, 478 |
| PinAI | ACCGGT | 1 cut(s) | 1075 |
| PkrI | GCNGC | 8 cut(s) | 13, 24, 1032, 1035, 1060, 1106, 1198, 1328 |
| PleI | GAGTC | 2 cut(s) | 1003, 1298 |
| PpsI | GAGTC | 2 cut(s) | 1003, 1298 |
| PshBI | ATTAAT | 1 cut(s) | 207 |
| PsiI | TTATAA | 1 cut(s) | 488 |
| Psp6I | CCWGG | 2 cut(s) | 93, 766 |
| PspFI | CCCAGC | 2 cut(s) | 169, 1169 |
| PspGI | CCWGG | 2 cut(s) | 93, 766 |
| PspN4I | GGNNCC | 2 cut(s) | 625, 1238 |
| PspPI | GGNCC | 5 cut(s) | 135, 343, 623, 1167, 1236 |
| PstNI | CAGNNNCTG | 3 cut(s) | 710, 852, 1196 |
| PsuI | RGATCY | 1 cut(s) | 228 |
| RigI | GGCCGGCC | 1 cut(s) | 685 |
| RsaI | GTAC | 1 cut(s) | 1085 |
| RsaNI | GTAC | 1 cut(s) | 1084 |
| RseI | CAYNNNNRTG | 4 cut(s) | 252, 323, 444, 1215 |
| SacII | CCGCGG | 1 cut(s) | 1105 |
| SaqAI | TTAA | 4 cut(s) | 155, 207, 366, 396 |
| SatI | GCNGC | 8 cut(s) | 12, 23, 1031, 1034, 1059, 1105, 1197, 1327 |
| Sau3AI | GATC | 6 cut(s) | 228, 258, 898, 955, 970, 1282 |
| Sau96I | GGNCC | 5 cut(s) | 135, 343, 623, 1167, 1236 |
| SchI | GAGTC | 2 cut(s) | 1004, 1298 |
| ScrFI | CCNGG | 5 cut(s) | 45, 95, 300, 532, 768 |
| SduI | GDGCHC | 1 cut(s) | 101 |
| SfaNI | GCATC | 4 cut(s) | 41, 298, 916, 925 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 1234 |
| Sfr303I | CCGCGG | 1 cut(s) | 1105 |
| SgrBI | CCGCGG | 1 cut(s) | 1105 |
| SinI | GGWCC | 3 cut(s) | 135, 343, 623 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 252, 323, 444, 1215 |
| Sse9I | AATT | 5 cut(s) | 144, 181, 294, 687, 884 |
| SseBI | AGGCCT | 3 cut(s) | 360, 829, 1228 |
| SsiI | CCGC | 7 cut(s) | 11, 48, 627, 1102, 1104, 1213, 1327 |
| SspMI | CTAG | 3 cut(s) | 362, 932, 1342 |
| StuI | AGGCCT | 3 cut(s) | 360, 829, 1228 |
| StyD4I | CCNGG | 5 cut(s) | 43, 93, 298, 530, 766 |
| StyI | CCWWGG | 1 cut(s) | 921 |
| TaaI | ACNGT | 1 cut(s) | 854 |
| TaqI | TCGA | 7 cut(s) | 33, 63, 72, 460, 476, 693, 732 |
| TasI | AATT | 5 cut(s) | 144, 181, 294, 687, 884 |
| TatI | WGTACW | 1 cut(s) | 1083 |
| TauI | GCSGC | 3 cut(s) | 14, 1107, 1329 |
| TfiI | GAWTC | 2 cut(s) | 65, 478 |
| Tru1I | TTAA | 4 cut(s) | 155, 207, 366, 396 |
| Tru9I | TTAA | 4 cut(s) | 155, 207, 366, 396 |
| TscAI | CASTG | 1 cut(s) | 857 |
| TseFI | GTSAC | 5 cut(s) | 245, 277, 314, 571, 854 |
| TseI | GCWGC | 5 cut(s) | 22, 1030, 1033, 1058, 1196 |
| Tsp45I | GTSAC | 5 cut(s) | 245, 277, 314, 571, 854 |
| TspDTI | ATGAA | 5 cut(s) | 51, 446, 510, 734, 827 |
| TspRI | CASTG | 1 cut(s) | 857 |
| VpaK11BI | GGWCC | 3 cut(s) | 135, 343, 623 |
| VspI | ATTAAT | 1 cut(s) | 207 |
| XapI | RAATTY | 1 cut(s) | 294 |
| XbaI | TCTAGA | 1 cut(s) | 931 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 101, 1197 |
| XmiI | GTMKAC | 1 cut(s) | 982 |
| XspI | CTAG | 3 cut(s) | 362, 932, 1342 |