Staphylococcal nuclease domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g14720 |
| rosa_chinensis | RchiOBHm_Chr6g0309151 |
| rosa_laevigata | RLG00000010586 |
| rosa_multiflora | Rmu_sc0020102.1_g000004 |
| rosa_rugosa | Rorug06G0370100 |
| rosa_samantha | Rh6AG482900 Rh6BG492000 Rh6CG496700 Rh6DG483600 |
| rosa_wichuraiana | Rw6G042050 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 1738, 2472 |
| AatII | GACGTC | 1 cut(s) | 1467 |
| Acc36I | ACCTGC | 1 cut(s) | 508 |
| AccB1I | GGYRCC | 1 cut(s) | 598 |
| AccBSI | CCGCTC | 1 cut(s) | 1012 |
| AccII | CGCG | 4 cut(s) | 815, 1605, 2119, 2420 |
| AccIII | TCCGGA | 2 cut(s) | 556, 2360 |
| AciI | CCGC | 7 cut(s) | 308, 413, 844, 1012, 1524, 2420, 2545 |
| AclI | AACGTT | 1 cut(s) | 1263 |
| AclWI | GGATC | 3 cut(s) | 146, 372, 1216 |
| AcoI | YGGCCR | 5 cut(s) | 141, 1168, 1446, 1810, 2334 |
| AcsI | RAATTY | 6 cut(s) | 919, 943, 1860, 1870, 1940, 2369 |
| AcuI | CTGAAG | 3 cut(s) | 27, 56, 2441 |
| AcvI | CACGTG | 1 cut(s) | 1091 |
| AcyI | GRCGYC | 5 cut(s) | 246, 599, 1129, 1464, 2034 |
| AfaI | GTAC | 5 cut(s) | 160, 804, 906, 1824, 2509 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 608, 1049, 1064, 1255, 1787, 2051, 2266, 2530 |
| AflIII | ACRYGT | 1 cut(s) | 2248 |
| AjiI | CACGTC | 1 cut(s) | 318 |
| AjnI | CCWGG | 7 cut(s) | 63, 768, 1248, 2218, 2382, 2523, 2547 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 458, 490, 1125, 1157 |
| AleI | CACNNNNGTG | 1 cut(s) | 2336 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2312, 2344 |
| Alw21I | GWGCWC | 6 cut(s) | 133, 329, 401, 1422, 2315, 2599 |
| Alw26I | GTCTC | 7 cut(s) | 452, 663, 741, 1455, 1550, 1676, 2508 |
| Alw44I | GTGCAC | 2 cut(s) | 1418, 2311 |
| AlwI | GGATC | 3 cut(s) | 146, 372, 1216 |
| Aor13HI | TCCGGA | 2 cut(s) | 556, 2360 |
| ApaLI | GTGCAC | 2 cut(s) | 1418, 2311 |
| ApoI | RAATTY | 6 cut(s) | 919, 943, 1860, 1870, 1940, 2369 |
| AseI | ATTAAT | 1 cut(s) | 1652 |
| AspA2I | CCTAGG | 1 cut(s) | 2045 |
| AspLEI | GCGC | 3 cut(s) | 601, 815, 2119 |
| AspS9I | GGNCC | 7 cut(s) | 67, 611, 766, 1408, 1731, 1801, 2393 |
| AsuC2I | CCSGG | 1 cut(s) | 408 |
| AsuHPI | GGTGA | 3 cut(s) | 312, 1079, 2066 |
| AvaII | GGWCC | 4 cut(s) | 611, 1731, 1801, 2393 |
| AvrII | CCTAGG | 1 cut(s) | 2045 |
| BaeGI | GKGCMC | 2 cut(s) | 1422, 2315 |
| BalI | TGGCCA | 1 cut(s) | 1812 |
| BanI | GGYRCC | 1 cut(s) | 598 |
| BanII | GRGCYC | 2 cut(s) | 1614, 2599 |
| BauI | CACGAG | 1 cut(s) | 660 |
| BbrPI | CACGTG | 1 cut(s) | 1091 |
| BbsI | GAAGAC | 1 cut(s) | 473 |
| Bbv12I | GWGCWC | 6 cut(s) | 133, 329, 401, 1422, 2315, 2599 |
| BbvCI | CCTCAGC | 5 cut(s) | 417, 1109, 1227, 1254, 1520 |
| BccI | CCATC | 5 cut(s) | 737, 817, 1042, 1480, 1802 |
| BceAI | ACGGC | 5 cut(s) | 699, 1461, 2204, 2321, 2349 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1349, 1383, 1955, 1989 |
| BciT130I | CCWGG | 7 cut(s) | 65, 770, 1250, 2220, 2384, 2525, 2549 |
| BclI | TGATCA | 1 cut(s) | 2578 |
| BcnI | CCSGG | 1 cut(s) | 408 |
| BcoDI | GTCTC | 7 cut(s) | 452, 663, 741, 1455, 1550, 1676, 2508 |
| BfaI | CTAG | 5 cut(s) | 635, 2046, 2103, 2472, 2477 |
| BfmI | CTRYAG | 4 cut(s) | 95, 350, 855, 1500 |
| BfoI | RGCGCY | 1 cut(s) | 602 |
| BfuAI | ACCTGC | 1 cut(s) | 508 |
| BlnI | CCTAGG | 1 cut(s) | 2045 |
| BlpI | GCTNAGC | 2 cut(s) | 1269, 2229 |
| BmcAI | AGTACT | 1 cut(s) | 160 |
| Bme1390I | CCNGG | 8 cut(s) | 65, 408, 770, 1250, 2220, 2384, 2525, 2549 |
| Bme18I | GGWCC | 4 cut(s) | 611, 1731, 1801, 2393 |
| BmgBI | CACGTC | 1 cut(s) | 318 |
| BmgT120I | GGNCC | 7 cut(s) | 67, 611, 766, 1408, 1731, 1801, 2393 |
| BmiI | GGNNCC | 6 cut(s) | 405, 600, 1410, 1732, 2096, 2389 |
| BmrFI | CCNGG | 8 cut(s) | 65, 408, 770, 1250, 2220, 2384, 2525, 2549 |
| BmrI | ACTGGG | 2 cut(s) | 150, 1593 |
| BmsI | GCATC | 5 cut(s) | 14, 219, 431, 823, 1168 |
| BmuI | ACTGGG | 2 cut(s) | 150, 1593 |
| BpiI | GAAGAC | 1 cut(s) | 473 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 316, 348 |
| BpmI | CTGGAG | 3 cut(s) | 415, 791, 1026 |
| Bpu10I | CCTNAGC | 5 cut(s) | 417, 1109, 1227, 1254, 1520 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1269, 2229 |
| BpuEI | CTTGAG | 2 cut(s) | 833, 2533 |
| BpuMI | CCSGG | 1 cut(s) | 408 |
| BsaAI | YACGTR | 1 cut(s) | 1091 |
| BsaHI | GRCGYC | 5 cut(s) | 246, 599, 1129, 1464, 2034 |
| BsaI | GGTCTC | 1 cut(s) | 452 |
| BsaJI | CCNNGG | 6 cut(s) | 806, 1098, 1401, 2045, 2383, 2548 |
| BsaWI | WCCGGW | 5 cut(s) | 86, 556, 1583, 2360, 2390 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 424, 454, 551, 581, 2261, 2291 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 608, 1049, 1064, 1255, 1787, 2051, 2266, 2530 |
| Bse118I | RCCGGY | 2 cut(s) | 143, 840 |
| Bse1I | ACTGG | 3 cut(s) | 144, 156, 1599 |
| BseAI | TCCGGA | 2 cut(s) | 556, 2360 |
| BseBI | CCWGG | 7 cut(s) | 65, 770, 1250, 2220, 2384, 2525, 2549 |
| BseDI | CCNNGG | 6 cut(s) | 806, 1098, 1401, 2045, 2383, 2548 |
| BseGI | GGATG | 6 cut(s) | 60, 422, 832, 1472, 1627, 2559 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 608, 1049, 1064, 1255, 1787, 2051, 2266, 2530 |
| BseNI | ACTGG | 3 cut(s) | 144, 156, 1599 |
| BseRI | GAGGAG | 4 cut(s) | 1337, 2285, 2288, 2589 |
| BseSI | GKGCMC | 2 cut(s) | 1422, 2315 |
| BseX3I | CGGCCG | 1 cut(s) | 2334 |
| BseYI | CCCAGC | 2 cut(s) | 883, 910 |
| BsgI | GTGCAG | 3 cut(s) | 1970, 2100, 2199 |
| Bsh1236I | CGCG | 4 cut(s) | 815, 1605, 2119, 2420 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2337 |
| BshNI | GGYRCC | 1 cut(s) | 598 |
| BsiEI | CGRYCG | 1 cut(s) | 2337 |
| BsiHKAI | GWGCWC | 6 cut(s) | 133, 329, 401, 1422, 2315, 2599 |
| BsiSI | CCGG | 8 cut(s) | 87, 144, 407, 557, 841, 1584, 2361, 2391 |
| BslFI | GGGAC | 6 cut(s) | 194, 1581, 1744, 1976, 2156, 2243 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 608, 1049, 1064, 1255, 1787, 2051, 2266, 2530 |
| BsmAI | GTCTC | 7 cut(s) | 452, 663, 741, 1455, 1550, 1676, 2508 |
| BsmBI | CGTCTC | 1 cut(s) | 1455 |
| BsmFI | GGGAC | 6 cut(s) | 194, 1581, 1744, 1976, 2156, 2243 |
| Bso31I | GGTCTC | 1 cut(s) | 452 |
| Bsp1286I | GDGCHC | 7 cut(s) | 133, 329, 401, 1422, 1614, 2315, 2599 |
| Bsp13I | TCCGGA | 2 cut(s) | 556, 2360 |
| Bsp143I | GATC | 5 cut(s) | 151, 364, 1208, 1328, 2578 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1269, 2229 |
| Bsp19I | CCATGG | 1 cut(s) | 806 |
| Bsp68I | TCGCGA | 1 cut(s) | 1605 |
| BspACI | CCGC | 7 cut(s) | 308, 413, 844, 1012, 1524, 2420, 2545 |
| BspEI | TCCGGA | 2 cut(s) | 556, 2360 |
| BspFNI | CGCG | 4 cut(s) | 815, 1605, 2119, 2420 |
| BspHI | TCATGA | 2 cut(s) | 934, 2584 |
| BspLI | GGNNCC | 6 cut(s) | 405, 600, 1410, 1732, 2096, 2389 |
| BspMAI | CTGCAG | 3 cut(s) | 354, 859, 1504 |
| BspMI | ACCTGC | 1 cut(s) | 508 |
| BspPI | GGATC | 3 cut(s) | 146, 372, 1216 |
| BspT107I | GGYRCC | 1 cut(s) | 598 |
| BspTNI | GGTCTC | 1 cut(s) | 452 |
| BsrBI | CCGCTC | 1 cut(s) | 1012 |
| BsrFI | RCCGGY | 2 cut(s) | 143, 840 |
| BsrI | ACTGG | 3 cut(s) | 144, 156, 1599 |
| BssAI | RCCGGY | 2 cut(s) | 143, 840 |
| BssECI | CCNNGG | 6 cut(s) | 806, 1098, 1401, 2045, 2383, 2548 |
| BssMI | GATC | 5 cut(s) | 151, 364, 1208, 1328, 2578 |
| BssNI | GRCGYC | 5 cut(s) | 246, 599, 1129, 1464, 2034 |
| BssSI | CACGAG | 1 cut(s) | 660 |
| BssT1I | CCWWGG | 4 cut(s) | 806, 1098, 1401, 2045 |
| Bst2BI | CACGAG | 1 cut(s) | 660 |
| Bst2UI | CCWGG | 7 cut(s) | 65, 770, 1250, 2220, 2384, 2525, 2549 |
| Bst4CI | ACNGT | 8 cut(s) | 403, 958, 1300, 1687, 1957, 2180, 2257, 2438 |
| Bst6I | CTCTTC | 4 cut(s) | 1964, 2206, 2420, 2483 |
| BstACI | GRCGYC | 5 cut(s) | 246, 599, 1129, 1464, 2034 |
| BstBAI | YACGTR | 1 cut(s) | 1091 |
| BstC8I | GCNNGC | 6 cut(s) | 494, 838, 842, 1077, 1762, 2620 |
| BstDSI | CCRYGG | 1 cut(s) | 806 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1062 |
| BstF5I | GGATG | 6 cut(s) | 60, 422, 832, 1472, 1627, 2559 |
| BstFNI | CGCG | 4 cut(s) | 815, 1605, 2119, 2420 |
| BstH2I | RGCGCY | 1 cut(s) | 602 |
| BstHHI | GCGC | 3 cut(s) | 601, 815, 2119 |
| BstKTI | GATC | 5 cut(s) | 154, 367, 1211, 1331, 2581 |
| BstMAI | GTCTC | 7 cut(s) | 452, 663, 741, 1455, 1550, 1676, 2508 |
| BstMBI | GATC | 5 cut(s) | 151, 364, 1208, 1328, 2578 |
| BstMCI | CGRYCG | 1 cut(s) | 2337 |
| BstNI | CCWGG | 7 cut(s) | 65, 770, 1250, 2220, 2384, 2525, 2549 |
| BstNSI | RCATGY | 3 cut(s) | 1287, 1563, 2252 |
| BstSCI | CCNGG | 8 cut(s) | 63, 406, 768, 1248, 2218, 2382, 2523, 2547 |
| BstSFI | CTRYAG | 4 cut(s) | 95, 350, 855, 1500 |
| BstSLI | GKGCMC | 2 cut(s) | 1422, 2315 |
| BstUI | CGCG | 4 cut(s) | 815, 1605, 2119, 2420 |
| BstV2I | GAAGAC | 1 cut(s) | 473 |
| BstX2I | RGATCY | 1 cut(s) | 151 |
| BstYI | RGATCY | 1 cut(s) | 151 |
| BstZI | CGGCCG | 1 cut(s) | 2334 |
| BtgI | CCRYGG | 1 cut(s) | 806 |
| BtgZI | GCGATG | 1 cut(s) | 1620 |
| BtrI | CACGTC | 1 cut(s) | 318 |
| BtsCI | GGATG | 6 cut(s) | 60, 422, 832, 1472, 1627, 2559 |
| BtsI | GCAGTG | 1 cut(s) | 1798 |
| BtsIMutI | CAGTG | 3 cut(s) | 1296, 1798, 2083 |
| BtuMI | TCGCGA | 1 cut(s) | 1605 |
| BveI | ACCTGC | 1 cut(s) | 508 |
| Cac8I | GCNNGC | 6 cut(s) | 494, 838, 842, 1077, 1762, 2620 |
| CciI | TCATGA | 2 cut(s) | 934, 2584 |
| CfoI | GCGC | 3 cut(s) | 601, 815, 2119 |
| Cfr10I | RCCGGY | 2 cut(s) | 143, 840 |
| Cfr13I | GGNCC | 7 cut(s) | 67, 611, 766, 1408, 1731, 1801, 2393 |
| CseI | GACGC | 3 cut(s) | 235, 1137, 2042 |
| CsiI | ACCWGGT | 1 cut(s) | 2218 |
| Csp6I | GTAC | 5 cut(s) | 159, 803, 905, 1823, 2508 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 284, 319 |
| CviQI | GTAC | 5 cut(s) | 159, 803, 905, 1823, 2508 |
| DinI | GGCGCC | 1 cut(s) | 600 |
| DpnI | GATC | 5 cut(s) | 153, 366, 1210, 1330, 2580 |
| DpnII | GATC | 5 cut(s) | 151, 364, 1208, 1328, 2578 |
| DraI | TTTAAA | 1 cut(s) | 1537 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 1738, 2472 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 1738, 2472 |
| EaeI | YGGCCR | 5 cut(s) | 141, 1168, 1446, 1810, 2334 |
| EagI | CGGCCG | 1 cut(s) | 2334 |
| Eam1104I | CTCTTC | 4 cut(s) | 1964, 2206, 2420, 2483 |
| EarI | CTCTTC | 4 cut(s) | 1964, 2206, 2420, 2483 |
| EciI | GGCGGA | 1 cut(s) | 2534 |
| Ecl136II | GAGCTC | 1 cut(s) | 2597 |
| EclXI | CGGCCG | 1 cut(s) | 2334 |
| Eco130I | CCWWGG | 4 cut(s) | 806, 1098, 1401, 2045 |
| Eco24I | GRGCYC | 2 cut(s) | 1614, 2599 |
| Eco31I | GGTCTC | 1 cut(s) | 452 |
| Eco47I | GGWCC | 4 cut(s) | 611, 1731, 1801, 2393 |
| Eco52I | CGGCCG | 1 cut(s) | 2334 |
| Eco53kI | GAGCTC | 1 cut(s) | 2597 |
| Eco57I | CTGAAG | 3 cut(s) | 27, 56, 2441 |
| Eco72I | CACGTG | 1 cut(s) | 1091 |
| EcoICRI | GAGCTC | 1 cut(s) | 2597 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1062 |
| EcoO109I | RGGNCCY | 2 cut(s) | 67, 1408 |
| EcoRII | CCWGG | 7 cut(s) | 63, 768, 1248, 2218, 2382, 2523, 2547 |
| EcoT14I | CCWWGG | 4 cut(s) | 806, 1098, 1401, 2045 |
| EcoT38I | GRGCYC | 2 cut(s) | 1614, 2599 |
| EgeI | GGCGCC | 1 cut(s) | 600 |
| EheI | GGCGCC | 1 cut(s) | 600 |
| ErhI | CCWWGG | 4 cut(s) | 806, 1098, 1401, 2045 |
| Esp3I | CGTCTC | 1 cut(s) | 1455 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1749, 1781 |
| FaqI | GGGAC | 6 cut(s) | 194, 1581, 1744, 1976, 2156, 2243 |
| FauNDI | CATATG | 1 cut(s) | 1084 |
| FbaI | TGATCA | 1 cut(s) | 2578 |
| FokI | GGATG | 6 cut(s) | 47, 409, 839, 1459, 1634, 2566 |
| FriOI | GRGCYC | 2 cut(s) | 1614, 2599 |
| FspBI | CTAG | 5 cut(s) | 635, 2046, 2103, 2472, 2477 |
| GlaI | GCGC | 3 cut(s) | 600, 814, 2118 |
| GsaI | CCCAGC | 2 cut(s) | 887, 914 |
| GsuI | CTGGAG | 3 cut(s) | 415, 791, 1026 |
| HaeII | RGCGCY | 1 cut(s) | 602 |
| HapII | CCGG | 8 cut(s) | 87, 144, 407, 557, 841, 1584, 2361, 2391 |
| HgaI | GACGC | 3 cut(s) | 235, 1137, 2042 |
| HhaI | GCGC | 3 cut(s) | 601, 815, 2119 |
| Hin1I | GRCGYC | 5 cut(s) | 246, 599, 1129, 1464, 2034 |
| Hin6I | GCGC | 3 cut(s) | 599, 813, 2117 |
| HinP1I | GCGC | 3 cut(s) | 599, 813, 2117 |
| HindIII | AAGCTT | 1 cut(s) | 2263 |
| HpaII | CCGG | 8 cut(s) | 87, 144, 407, 557, 841, 1584, 2361, 2391 |
| HphI | GGTGA | 3 cut(s) | 312, 1079, 2066 |
| Hpy166II | GTNNAC | 3 cut(s) | 1420, 2313, 2331 |
| Hpy8I | GTNNAC | 3 cut(s) | 1420, 2313, 2331 |
| Hpy99I | CGWCG | 1 cut(s) | 251 |
| HpyCH4III | ACNGT | 8 cut(s) | 403, 958, 1300, 1687, 1957, 2180, 2257, 2438 |
| HpyCH4IV | ACGT | 4 cut(s) | 317, 1090, 1263, 1464 |
| HpySE526I | ACGT | 4 cut(s) | 317, 1090, 1263, 1464 |
| Hsp92I | GRCGYC | 5 cut(s) | 246, 599, 1129, 1464, 2034 |
| HspAI | GCGC | 3 cut(s) | 599, 813, 2117 |
| KasI | GGCGCC | 1 cut(s) | 598 |
| Kpn2I | TCCGGA | 2 cut(s) | 556, 2360 |
| KroI | GCCGGC | 1 cut(s) | 840 |
| KroNI | GCCGGC | 1 cut(s) | 842 |
| Ksp22I | TGATCA | 1 cut(s) | 2578 |
| Kzo9I | GATC | 5 cut(s) | 151, 364, 1208, 1328, 2578 |
| LmnI | GCTCC | 6 cut(s) | 136, 396, 772, 810, 2023, 2602 |
| LweI | GCATC | 5 cut(s) | 14, 219, 431, 823, 1168 |
| MabI | ACCWGGT | 1 cut(s) | 2218 |
| MaeI | CTAG | 5 cut(s) | 635, 2046, 2103, 2472, 2477 |
| MaeII | ACGT | 4 cut(s) | 317, 1090, 1263, 1464 |
| MaeIII | GTNAC | 8 cut(s) | 313, 318, 1793, 2030, 2054, 2184, 2251, 2407 |
| MalI | GATC | 5 cut(s) | 153, 366, 1210, 1330, 2580 |
| MbiI | CCGCTC | 1 cut(s) | 1012 |
| MboI | GATC | 5 cut(s) | 151, 364, 1208, 1328, 2578 |
| MfeI | CAATTG | 3 cut(s) | 340, 1629, 1743 |
| MflI | RGATCY | 1 cut(s) | 151 |
| MhlI | GDGCHC | 7 cut(s) | 133, 329, 401, 1422, 1614, 2315, 2599 |
| MlsI | TGGCCA | 1 cut(s) | 1812 |
| MluNI | TGGCCA | 1 cut(s) | 1812 |
| Mly113I | GGCGCC | 1 cut(s) | 599 |
| MlyI | GAGTC | 8 cut(s) | 36, 427, 463, 665, 743, 1026, 1733, 2582 |
| Mox20I | TGGCCA | 1 cut(s) | 1812 |
| MroI | TCCGGA | 2 cut(s) | 556, 2360 |
| MroNI | GCCGGC | 1 cut(s) | 840 |
| MscI | TGGCCA | 1 cut(s) | 1812 |
| MseI | TTAA | 6 cut(s) | 375, 1221, 1536, 1652, 2040, 2196 |
| MslI | CAYNNNNRTG | 2 cut(s) | 10, 2336 |
| Msp20I | TGGCCA | 1 cut(s) | 1812 |
| MspA1I | CMGCKG | 1 cut(s) | 1524 |
| MspI | CCGG | 8 cut(s) | 87, 144, 407, 557, 841, 1584, 2361, 2391 |
| MspR9I | CCNGG | 8 cut(s) | 65, 408, 770, 1250, 2220, 2384, 2525, 2549 |
| MunI | CAATTG | 3 cut(s) | 340, 1629, 1743 |
| MvaI | CCWGG | 7 cut(s) | 65, 770, 1250, 2220, 2384, 2525, 2549 |
| MvnI | CGCG | 4 cut(s) | 815, 1605, 2119, 2420 |
| NaeI | GCCGGC | 1 cut(s) | 842 |
| NarI | GGCGCC | 1 cut(s) | 599 |
| NciI | CCSGG | 1 cut(s) | 408 |
| NcoI | CCATGG | 1 cut(s) | 806 |
| NdeI | CATATG | 1 cut(s) | 1084 |
| NdeII | GATC | 5 cut(s) | 151, 364, 1208, 1328, 2578 |
| NgoMIV | GCCGGC | 1 cut(s) | 840 |
| NlaIV | GGNNCC | 6 cut(s) | 405, 600, 1410, 1732, 2096, 2389 |
| NmuCI | GTSAC | 5 cut(s) | 313, 318, 1793, 2030, 2054 |
| NruI | TCGCGA | 1 cut(s) | 1605 |
| NspI | RCATGY | 3 cut(s) | 1287, 1563, 2252 |
| OliI | CACNNNNGTG | 1 cut(s) | 2336 |
| PagI | TCATGA | 2 cut(s) | 934, 2584 |
| PciI | ACATGT | 1 cut(s) | 2248 |
| PdiI | GCCGGC | 1 cut(s) | 842 |
| PfeI | GAWTC | 5 cut(s) | 50, 90, 1001, 1184, 1361 |
| PflFI | GACNNNGTC | 2 cut(s) | 1799, 2060 |
| PfoI | TCCNGGA | 1 cut(s) | 2523 |
| PleI | GAGTC | 8 cut(s) | 35, 427, 463, 664, 743, 1025, 1732, 2581 |
| PluTI | GGCGCC | 1 cut(s) | 602 |
| PmaCI | CACGTG | 1 cut(s) | 1091 |
| PmlI | CACGTG | 1 cut(s) | 1091 |
| PpsI | GAGTC | 8 cut(s) | 35, 427, 463, 664, 743, 1025, 1732, 2581 |
| Ppu21I | YACGTR | 1 cut(s) | 1091 |
| PscI | ACATGT | 1 cut(s) | 2248 |
| PshBI | ATTAAT | 1 cut(s) | 1652 |
| Psp124BI | GAGCTC | 1 cut(s) | 2599 |
| Psp1406I | AACGTT | 1 cut(s) | 1263 |
| Psp6I | CCWGG | 7 cut(s) | 63, 768, 1248, 2218, 2382, 2523, 2547 |
| PspCI | CACGTG | 1 cut(s) | 1091 |
| PspFI | CCCAGC | 2 cut(s) | 883, 910 |
| PspGI | CCWGG | 7 cut(s) | 63, 768, 1248, 2218, 2382, 2523, 2547 |
| PspN4I | GGNNCC | 6 cut(s) | 405, 600, 1410, 1732, 2096, 2389 |
| PspPI | GGNCC | 7 cut(s) | 67, 611, 766, 1408, 1731, 1801, 2393 |
| PstI | CTGCAG | 3 cut(s) | 354, 859, 1504 |
| PsuI | RGATCY | 1 cut(s) | 151 |
| PsyI | GACNNNGTC | 2 cut(s) | 1799, 2060 |
| RruI | TCGCGA | 1 cut(s) | 1605 |
| RsaI | GTAC | 5 cut(s) | 160, 804, 906, 1824, 2509 |
| RsaNI | GTAC | 5 cut(s) | 159, 803, 905, 1823, 2508 |
| RseI | CAYNNNNRTG | 2 cut(s) | 10, 2336 |
| SacI | GAGCTC | 1 cut(s) | 2599 |
| SaqAI | TTAA | 6 cut(s) | 375, 1221, 1536, 1652, 2040, 2196 |
| Sau3AI | GATC | 5 cut(s) | 151, 364, 1208, 1328, 2578 |
| Sau96I | GGNCC | 7 cut(s) | 67, 611, 766, 1408, 1731, 1801, 2393 |
| ScaI | AGTACT | 1 cut(s) | 160 |
| SchI | GAGTC | 8 cut(s) | 36, 427, 463, 665, 743, 1026, 1733, 2582 |
| ScrFI | CCNGG | 8 cut(s) | 65, 408, 770, 1250, 2220, 2384, 2525, 2549 |
| SduI | GDGCHC | 7 cut(s) | 133, 329, 401, 1422, 1614, 2315, 2599 |
| SexAI | ACCWGGT | 1 cut(s) | 2218 |
| SfaNI | GCATC | 5 cut(s) | 14, 219, 431, 823, 1168 |
| SfcI | CTRYAG | 4 cut(s) | 95, 350, 855, 1500 |
| SfoI | GGCGCC | 1 cut(s) | 600 |
| SinI | GGWCC | 4 cut(s) | 611, 1731, 1801, 2393 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 10, 2336 |
| SmlI | CTYRAG | 2 cut(s) | 848, 2512 |
| SmoI | CTYRAG | 2 cut(s) | 848, 2512 |
| SsiI | CCGC | 7 cut(s) | 308, 413, 844, 1012, 1524, 2420, 2545 |
| SspDI | GGCGCC | 1 cut(s) | 598 |
| SspMI | CTAG | 5 cut(s) | 635, 2046, 2103, 2472, 2477 |
| SstI | GAGCTC | 1 cut(s) | 2599 |
| StyD4I | CCNGG | 8 cut(s) | 63, 406, 768, 1248, 2218, 2382, 2523, 2547 |
| StyI | CCWWGG | 4 cut(s) | 806, 1098, 1401, 2045 |
| TaaI | ACNGT | 8 cut(s) | 403, 958, 1300, 1687, 1957, 2180, 2257, 2438 |
| TaiI | ACGT | 4 cut(s) | 320, 1093, 1266, 1467 |
| TaqI | TCGA | 2 cut(s) | 513, 1028 |
| TatI | WGTACW | 1 cut(s) | 158 |
| TauI | GCSGC | 3 cut(s) | 311, 416, 847 |
| TfiI | GAWTC | 5 cut(s) | 50, 90, 1001, 1184, 1361 |
| Tru1I | TTAA | 6 cut(s) | 375, 1221, 1536, 1652, 2040, 2196 |
| Tru9I | TTAA | 6 cut(s) | 375, 1221, 1536, 1652, 2040, 2196 |
| TscAI | CASTG | 3 cut(s) | 1303, 1798, 2083 |
| TseFI | GTSAC | 5 cut(s) | 313, 318, 1793, 2030, 2054 |
| Tsp45I | GTSAC | 5 cut(s) | 313, 318, 1793, 2030, 2054 |
| TspDTI | ATGAA | 5 cut(s) | 479, 843, 923, 1638, 1847 |
| TspGWI | ACGGA | 3 cut(s) | 563, 668, 1713 |
| TspRI | CASTG | 3 cut(s) | 1303, 1798, 2083 |
| Tth111I | GACNNNGTC | 2 cut(s) | 1799, 2060 |
| VneI | GTGCAC | 2 cut(s) | 1418, 2311 |
| VpaK11BI | GGWCC | 4 cut(s) | 611, 1731, 1801, 2393 |
| VspI | ATTAAT | 1 cut(s) | 1652 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1062 |
| XapI | RAATTY | 6 cut(s) | 919, 943, 1860, 1870, 1940, 2369 |
| XbaI | TCTAGA | 1 cut(s) | 2476 |
| XceI | RCATGY | 3 cut(s) | 1287, 1563, 2252 |
| XmaJI | CCTAGG | 1 cut(s) | 2045 |
| XspI | CTAG | 5 cut(s) | 635, 2046, 2103, 2472, 2477 |
| ZraI | GACGTC | 1 cut(s) | 1465 |
| ZrmI | AGTACT | 1 cut(s) | 160 |