Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0009978

Physical Location & Seq

Genomic Coordinates Forward (+)

67604141 .. 67607136

Gene Structure 2996 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G044470.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1800 bp

ATGGCGTGTGCAATTGTGTGCGGAGAATCATCGCCGTCCCACATTACGCTTTTCCGATGCTTGAATCGAACTCTGGACTCTATTAAGGACAATATCGCTATCATCTTCGCTAACATTTTGGGCTGCCAAGCTGACACCGCTGAAAATTTCAGGAATTGTAGGAGTGAGGATCTAGTTCCATCTAGTTTCGAGGAATTGCTGGAAAAATGGGGTGAGGATAACCACTTGATTGATCAGGATTGGTTTTCGAGGAAGAAGAATGCCGGCAATGATCAGGATCCGCAGGCAGAGTTCAATGTGTTGGATACAATGCTGAAGGATAGTTTGGAGCGTCTGAAAACAATGAGGGAAAGCATATCAGTGGCAAAGATAGGTTTTTTGGGATGCACTTTGAAAGCTAATTACTCAGAACACATGGACATCATAAGGGGTTTATGCGTTGATGGTAAGTTGGGGTCTGCCTTTTGGCTTCGGAGAAAGATGATGAAGAAAGGGATTATTCCAGATGTATCGACACATAATTATCTATTGAATGGACTGTGTAAAGCTGGCGATTTGGAGAAGGCAAATTTGCTTATCAGGGAGATGCTAGAAATGGGTCCCGCTCCCAACTGTGTCACATACAACACTTTTATTAAGGGTTATTGCCTTCTTGATAAAGTGGATAAAGCTCTTTATCTTTTCTCCACAATGGGTAACAGTGGTATTAGGCCGAATAGTATTACTTGTAATATTCTTGTGCATGCATTGTGCAAGAAAGGTCTTGCGGAGAATGCTAGGAAGCTTCTTGAAGAGATATTAGATGATGATGATGATGATGATGATGAGAAAACAGACTCAGGTATAATTACCTTAACTACACTTATGGATGGTTATCTTAAAAATGGAAATATGGTTCAGGCACTTAGTCTTTGGGTTGACATCCAAAGGAATACCCAAGTAGATGTCATTGCTTATAATGTTCTCATCCGTGGATTTTGTTTGAGTCGGCAAATGAACCTTGCTTATGGATACTTCTGTGAAATGACCAAAAGAGGTTTACATCCTGATGTTTTTACTTGTAATACACTTATAAGTGGTCTTTGCAAAGAAAGAAAGTTTGAGGAGGCTTGTTACATCCATGGTATTATGCCAAGAATGGGAATTACTCCAGATAAAGTTTCGTACAAAATAATTATACAAGGCCTATGTATCCAGGGAGATGTTGTCAAAGCTCATGAATTTCTTCTTAGTATGTTAGAGAAGTCGATGGTGCCTGAGCCTTTGATATGGAATTGTATTATTGATTGTTATGGAAGATATGGGGATCTTAGTAATGCAGTTTCTGTTAAGGATCAGATGTTTGCTTTTGGTGTTCAACCAAACGTATATACTTACAATGCATTGATCCACGCACAAGTGAAAGGAGGAAATATCATTGATGCTCTTTCTCTTGAAAAGGGTATGCTTCTGTCTGGTCTTTTTCCTGATGTGGTGACTTATAATATGTTGATAGGGGGAGCTTGTAACTCAGGGCATTTGGAATTTGCCACGGAGCTATATCATAAAATGCTGAAAATAGGACTTGATCCAGATATATATACTTACACTGAACTAATCAGAGGGAACTGCAAGAGAGGTAATATCAAGGAGGCAGAAAATGTTCTTGCGAAGATACAGGCATCTGGTTTGCCTATTGATGATGTTCCATTTCAGATACTTTTCAAGAAGTACTGCAAAATGAGGGAGCCTGATAAAGCATCTGGCATTTATGAGAAGTGGCTAGCGAGGAGGAATGAGTTGCCCTCTTTAAGAACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

599

Amino Acids

67.33

Weight (kDa)

5.87

Isoelectric Point (pI)

29.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	141 - 182	3.6e-09	PPR repeat family
PPR_3	PF13812	158 - 215	5.5e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	164 - 196	6.4e-09	PPR repeat
PPR_2	PF13041	170 - 216	2.5e-12	PPR repeat family
PPR_1	PF12854	200 - 231	1.5e-09	PPR repeat
PPR_2	PF13041	203 - 252	2.6e-15	PPR repeat family
PPR	PF01535	206 - 236	7.8e-06	PPR repeat
PPR_1	PF12854	235 - 265	1.1e-06	PPR repeat
PPR_2	PF13041	315 - 363	5.7e-16	PPR repeat family
PPR_3	PF13812	341 - 394	9.2e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	345 - 371	1.4e-07	PPR repeat
PPR_2	PF13041	349 - 397	4.4e-15	PPR repeat family
PPR_1	PF12854	380 - 412	2.4e-06	PPR repeat
PPR_2	PF13041	423 - 465	1.2e-10	PPR repeat family
PPR_long	PF17177	432 - 574	6.5e-07	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	442 - 499	8.8e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	486 - 517	3.4e-09	PPR repeat
PPR_2	PF13041	489 - 538	1.2e-15	PPR repeat family
PPR_1	PF12854	521 - 549	6.8e-07	PPR repeat
PPR_2	PF13041	528 - 573	3.5e-06	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0009978)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G24830
fragaria_vesca	FvH4_2g30660 FvH4_2g30660 FvH4_2g30660 FvH4_2g30660 FvH4_2g30660
malus_domestica	MD08G1133900.v1.1 MD15G1110300.v1.1
prunus_persica	Prupe.1G462500_v2.0.a1
pyrus_communis	pycom08g11270
rosa_chinensis	RchiOBHm_Chr6g0312241
rosa_laevigata	RLG00000010339
rosa_multiflora	Rmu_sc0010924.1_g000002 Rmu_ssc0000424.1_g000002
rosa_roxburghii	Rroxscaffold_7G00156920
rosa_rugosa	Rorug06G0394300
rosa_samantha	Rh6AG511300 Rh6BG522300 Rh6CG528100 Rh6DG513600
rosa_wichuraiana	Rw6G044470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	957, 1073, 1482
AccB1I	GGYRCC	1 cut(s)	1252
AccBSI	CCGCTC	1 cut(s)	605
AciI	CCGC	5 cut(s)	21, 138, 281, 603, 767
AclWI	GGATC	7 cut(s)	177, 272, 285, 1314, 1341, 1381, 1562
AcsI	RAATTY	4 cut(s)	145, 568, 1220, 1523
AcuI	CTGAAG	1 cut(s)	335
AfaI	GTAC	2 cut(s)	1166, 1712
AfiI	CCNNNNNNNGG	1 cut(s)	1139
AgsI	TTSAA	8 cut(s)	64, 295, 394, 532, 791, 1358, 1436, 1705
AjnI	CCWGG	1 cut(s)	1194
AjuI	GAANNNNNNNTTGG	2 cut(s)	308, 340
AloI	GAACNNNNNNTCC	2 cut(s)	879, 911
AluBI	AGCT	8 cut(s)	131, 398, 548, 671, 784, 1214, 1502, 1537
AluI	AGCT	8 cut(s)	131, 398, 548, 671, 784, 1214, 1502, 1537
AlwI	GGATC	7 cut(s)	177, 272, 285, 1314, 1341, 1381, 1562
AlwNI	CAGNNNCTG	1 cut(s)	1325
AoxI	GGCC	2 cut(s)	710, 1183
ApeKI	GCWGC	1 cut(s)	123
ApoI	RAATTY	4 cut(s)	145, 568, 1220, 1523
Asp700I	GAANNNNTTC	2 cut(s)	1224, 1641
AspS9I	GGNCC	1 cut(s)	599
AsuHPI	GGTGA	2 cut(s)	224, 1486
AsuNHI	GCTAGC	1 cut(s)	1762
AvaII	GGWCC	1 cut(s)	599
BaeI	ACNNNNGTAYC	2 cut(s)	1003, 1036
BamHI	GGATCC	1 cut(s)	277
BanI	GGYRCC	1 cut(s)	1252
BbvI	GCAGC	1 cut(s)	110
BccI	CCATC	4 cut(s)	187, 437, 863, 1243
BceAI	ACGGC	1 cut(s)	19
BciT130I	CCWGG	1 cut(s)	1196
BciVI	GTATCC	3 cut(s)	298, 1004, 1202
BclI	TGATCA	2 cut(s)	232, 271
BfaI	CTAG	5 cut(s)	173, 183, 590, 777, 1763
BfuI	GTATCC	3 cut(s)	298, 1004, 1202
BisI	GCNGC	1 cut(s)	124
BlsI	GCNGC	1 cut(s)	125
BmcAI	AGTACT	1 cut(s)	1712
Bme1390I	CCNGG	1 cut(s)	1196
Bme18I	GGWCC	1 cut(s)	599
BmgT120I	GGNCC	1 cut(s)	599
BmiI	GGNNCC	5 cut(s)	279, 600, 601, 1254, 1728
BmrFI	CCNGG	1 cut(s)	1196
BmsI	GCATC	6 cut(s)	47, 374, 576, 1411, 1670, 1748
BmtI	GCTAGC	1 cut(s)	1766
BplI	GAGNNNNNCTC	1 cut(s)	1769
BpmI	CTGGAG	1 cut(s)	1134
Bpu10I	CCTNAGC	1 cut(s)	1257
BsaBI	GATNNNNATC	2 cut(s)	276, 873
BsaJI	CCNNGG	4 cut(s)	970, 1120, 1195, 1530
BsaXI	ACNNNNNCTCC	2 cut(s)	1191, 1221
Bsc4I	CCNNNNNNNGG	1 cut(s)	1139
Bse118I	RCCGGY	1 cut(s)	263
Bse3DI	GCAATG	2 cut(s)	274, 948
Bse8I	GATNNNNATC	2 cut(s)	276, 873
BseBI	CCWGG	1 cut(s)	1196
BseDI	CCNNGG	4 cut(s)	970, 1120, 1195, 1530
BseGI	GGATG	6 cut(s)	389, 874, 921, 966, 1042, 1116
BseJI	GATNNNNATC	2 cut(s)	276, 873
BseLI	CCNNNNNNNGG	1 cut(s)	1139
BseMI	GCAATG	2 cut(s)	274, 948
BseMII	CTCAG	4 cut(s)	420, 852, 1248, 1524
BseRI	GAGGAG	2 cut(s)	1118, 1783
BseXI	GCAGC	1 cut(s)	110
BshFI	GGCC	2 cut(s)	712, 1185
BshNI	GGYRCC	1 cut(s)	1252
BsiSI	CCGG	1 cut(s)	264
BslFI	GGGAC	2 cut(s)	22, 585
BslI	CCNNNNNNNGG	1 cut(s)	1139
BsmFI	GGGAC	2 cut(s)	22, 585
BsmI	GAATGC	2 cut(s)	265, 778
BsnI	GGCC	2 cut(s)	712, 1185
Bsp143I	GATC	8 cut(s)	169, 232, 271, 277, 1306, 1333, 1386, 1567
Bsp19I	CCATGG	1 cut(s)	1120
BspACI	CCGC	5 cut(s)	21, 138, 281, 603, 767
BspANI	GGCC	2 cut(s)	712, 1185
BspCNI	CTCAG	4 cut(s)	419, 851, 1249, 1523
BspHI	TCATGA	1 cut(s)	1216
BspLI	GGNNCC	5 cut(s)	279, 600, 601, 1254, 1728
BspOI	GCTAGC	1 cut(s)	1766
BspPI	GGATC	7 cut(s)	177, 272, 285, 1314, 1341, 1381, 1562
BspT107I	GGYRCC	1 cut(s)	1252
BsrBI	CCGCTC	1 cut(s)	605
BsrDI	GCAATG	2 cut(s)	274, 948
BsrFI	RCCGGY	1 cut(s)	263
BssAI	RCCGGY	1 cut(s)	263
BssECI	CCNNGG	4 cut(s)	970, 1120, 1195, 1530
BssMI	GATC	8 cut(s)	169, 232, 271, 277, 1306, 1333, 1386, 1567
BssT1I	CCWWGG	1 cut(s)	1120
Bst2UI	CCWGG	1 cut(s)	1196
Bst4CI	ACNGT	3 cut(s)	540, 614, 701
Bst6I	CTCTTC	1 cut(s)	786
BstC8I	GCNNGC	5 cut(s)	265, 285, 550, 744, 1764
BstDEI	CTNAG	8 cut(s)	406, 838, 905, 1229, 1257, 1310, 1510, 1797
BstDSI	CCRYGG	3 cut(s)	970, 1120, 1530
BstF5I	GGATG	6 cut(s)	389, 874, 921, 966, 1042, 1116
BstKTI	GATC	8 cut(s)	172, 235, 274, 280, 1309, 1336, 1389, 1570
BstMBI	GATC	8 cut(s)	169, 232, 271, 277, 1306, 1333, 1386, 1567
BstMWI	GCNNNNNNNGC	2 cut(s)	137, 773
BstNI	CCWGG	1 cut(s)	1196
BstNSI	RCATGY	1 cut(s)	746
BstSCI	CCNGG	1 cut(s)	1194
BstV1I	GCAGC	1 cut(s)	110
BstX2I	RGATCY	3 cut(s)	169, 277, 1306
BstYI	RGATCY	3 cut(s)	169, 277, 1306
BsuI	GTATCC	3 cut(s)	298, 1004, 1202
BsuRI	GGCC	2 cut(s)	712, 1185
BtgI	CCRYGG	3 cut(s)	970, 1120, 1530
BtgZI	GCGATG	1 cut(s)	15
BtsCI	GGATG	6 cut(s)	389, 874, 921, 966, 1042, 1116
BtsIMutI	CAGTG	3 cut(s)	366, 706, 1587
Cac8I	GCNNGC	5 cut(s)	265, 285, 550, 744, 1764
CaiI	CAGNNNCTG	1 cut(s)	1325
CciI	TCATGA	1 cut(s)	1216
Cfr10I	RCCGGY	1 cut(s)	263
Cfr13I	GGNCC	1 cut(s)	599
CseI	GACGC	1 cut(s)	320
Csp6I	GTAC	2 cut(s)	1165, 1711
CviAII	CATG	4 cut(s)	415, 743, 1121, 1217
CviQI	GTAC	2 cut(s)	1165, 1711
DdeI	CTNAG	8 cut(s)	406, 838, 905, 1229, 1257, 1310, 1510, 1797
DpnI	GATC	8 cut(s)	171, 234, 273, 279, 1308, 1335, 1388, 1569
DpnII	GATC	8 cut(s)	169, 232, 271, 277, 1306, 1333, 1386, 1567
Eam1104I	CTCTTC	1 cut(s)	786
EarI	CTCTTC	1 cut(s)	786
Eco130I	CCWWGG	1 cut(s)	1120
Eco147I	AGGCCT	1 cut(s)	1185
Eco47I	GGWCC	1 cut(s)	599
Eco57I	CTGAAG	1 cut(s)	335
EcoO109I	RGGNCCY	1 cut(s)	599
EcoRII	CCWGG	1 cut(s)	1194
EcoT14I	CCWWGG	1 cut(s)	1120
EcoT22I	ATGCAT	2 cut(s)	748, 1384
ErhI	CCWWGG	1 cut(s)	1120
FaeI	CATG	4 cut(s)	418, 746, 1124, 1220
FaqI	GGGAC	2 cut(s)	22, 585
FatI	CATG	4 cut(s)	414, 742, 1120, 1216
FauI	CCCGC	1 cut(s)	610
FbaI	TGATCA	2 cut(s)	232, 271
Fnu4HI	GCNGC	1 cut(s)	124
FokI	GGATG	6 cut(s)	396, 881, 908, 953, 1029, 1103
Fsp4HI	GCNGC	1 cut(s)	124
FspBI	CTAG	5 cut(s)	173, 183, 590, 777, 1763
GluI	GCNGC	1 cut(s)	124
GsuI	CTGGAG	1 cut(s)	1134
HaeIII	GGCC	2 cut(s)	712, 1185
HapII	CCGG	1 cut(s)	264
HgaI	GACGC	1 cut(s)	320
Hin1II	CATG	4 cut(s)	418, 746, 1124, 1220
HincII	GTYRAC	1 cut(s)	919
HindII	GTYRAC	1 cut(s)	919
HindIII	AAGCTT	1 cut(s)	782
HinfI	GANTC	5 cut(s)	26, 64, 77, 836, 985
HpaII	CCGG	1 cut(s)	264
HphI	GGTGA	2 cut(s)	224, 1486
Hpy166II	GTNNAC	2 cut(s)	919, 1040
Hpy188I	TCNGA	7 cut(s)	56, 336, 409, 474, 1338, 1601, 1695
Hpy8I	GTNNAC	2 cut(s)	919, 1040
HpyAV	CCTTC	3 cut(s)	310, 556, 659
HpyCH4III	ACNGT	3 cut(s)	540, 614, 701
HpyCH4IV	ACGT	1 cut(s)	1365
HpyF10VI	GCNNNNNNNGC	2 cut(s)	137, 773
HpyF3I	CTNAG	8 cut(s)	406, 838, 905, 1229, 1257, 1310, 1510, 1797
HpySE526I	ACGT	1 cut(s)	1365
Hsp92II	CATG	4 cut(s)	418, 746, 1124, 1220
KflI	GGGWCCC	1 cut(s)	599
KroI	GCCGGC	1 cut(s)	263
KroNI	GCCGGC	1 cut(s)	265
Ksp22I	TGATCA	2 cut(s)	232, 271
Kzo9I	GATC	8 cut(s)	169, 232, 271, 277, 1306, 1333, 1386, 1567
LmnI	GCTCC	5 cut(s)	328, 610, 1499, 1534, 1726
Lsp1109I	GCAGC	1 cut(s)	110
LweI	GCATC	6 cut(s)	47, 374, 576, 1411, 1670, 1748
MaeI	CTAG	5 cut(s)	173, 183, 590, 777, 1763
MaeII	ACGT	1 cut(s)	1365
MaeIII	GTNAC	5 cut(s)	616, 695, 1112, 1474, 1505
MalI	GATC	8 cut(s)	171, 234, 273, 279, 1308, 1335, 1388, 1569
MbiI	CCGCTC	1 cut(s)	605
MboI	GATC	8 cut(s)	169, 232, 271, 277, 1306, 1333, 1386, 1567
MboII	GAAGA	8 cut(s)	97, 265, 268, 499, 803, 1217, 1308, 1663
MfeI	CAATTG	1 cut(s)	12
MflI	RGATCY	3 cut(s)	169, 277, 1306
MlyI	GAGTC	3 cut(s)	71, 830, 994
MmeI	TCCRAC	1 cut(s)	282
Mph1103I	ATGCAT	2 cut(s)	748, 1384
MroNI	GCCGGC	1 cut(s)	263
MroXI	GAANNNNTTC	2 cut(s)	1224, 1641
MseI	TTAA	6 cut(s)	84, 636, 854, 879, 1329, 1790
MslI	CAYNNNNRTG	2 cut(s)	359, 1047
MspA1I	CMGCKG	1 cut(s)	140
MspI	CCGG	1 cut(s)	264
MspR9I	CCNGG	1 cut(s)	1196
MunI	CAATTG	1 cut(s)	12
Mva1269I	GAATGC	2 cut(s)	265, 778
MvaI	CCWGG	1 cut(s)	1196
MwoI	GCNNNNNNNGC	2 cut(s)	137, 773
NaeI	GCCGGC	1 cut(s)	265
NcoI	CCATGG	1 cut(s)	1120
NdeII	GATC	8 cut(s)	169, 232, 271, 277, 1306, 1333, 1386, 1567
NgoMIV	GCCGGC	1 cut(s)	263
NheI	GCTAGC	1 cut(s)	1762
NlaIII	CATG	4 cut(s)	418, 746, 1124, 1220
NlaIV	GGNNCC	5 cut(s)	279, 600, 601, 1254, 1728
NmuCI	GTSAC	2 cut(s)	616, 1474
NsiI	ATGCAT	2 cut(s)	748, 1384
NspI	RCATGY	1 cut(s)	746
PaeI	GCATGC	1 cut(s)	746
PagI	TCATGA	1 cut(s)	1216
PceI	AGGCCT	1 cut(s)	1185
PctI	GAATGC	2 cut(s)	265, 778
PdiI	GCCGGC	1 cut(s)	265
PdmI	GAANNNNTTC	2 cut(s)	1224, 1641
PfeI	GAWTC	2 cut(s)	26, 64
PkrI	GCNGC	1 cut(s)	125
PleI	GAGTC	3 cut(s)	71, 830, 993
PpsI	GAGTC	3 cut(s)	71, 830, 993
PpuMI	RGGWCCY	1 cut(s)	599
PsiI	TTATAA	3 cut(s)	957, 1073, 1482
Psp5II	RGGWCCY	1 cut(s)	599
Psp6I	CCWGG	1 cut(s)	1194
PspGI	CCWGG	1 cut(s)	1194
PspN4I	GGNNCC	5 cut(s)	279, 600, 601, 1254, 1728
PspPI	GGNCC	1 cut(s)	599
PspPPI	RGGWCCY	1 cut(s)	599
PstNI	CAGNNNCTG	1 cut(s)	1325
PsuI	RGATCY	3 cut(s)	169, 277, 1306
RsaI	GTAC	2 cut(s)	1166, 1712
RsaNI	GTAC	2 cut(s)	1165, 1711
RseI	CAYNNNNRTG	2 cut(s)	359, 1047
SaqAI	TTAA	6 cut(s)	84, 636, 854, 879, 1329, 1790
SatI	GCNGC	1 cut(s)	124
Sau3AI	GATC	8 cut(s)	169, 232, 271, 277, 1306, 1333, 1386, 1567
Sau96I	GGNCC	1 cut(s)	599
ScaI	AGTACT	1 cut(s)	1712
SchI	GAGTC	3 cut(s)	71, 830, 994
ScrFI	CCNGG	1 cut(s)	1196
SfaNI	GCATC	6 cut(s)	47, 374, 576, 1411, 1670, 1748
SinI	GGWCC	1 cut(s)	599
SmiMI	CAYNNNNRTG	2 cut(s)	359, 1047
SphI	GCATGC	1 cut(s)	746
SseBI	AGGCCT	1 cut(s)	1185
SsiI	CCGC	5 cut(s)	21, 138, 281, 603, 767
SspI	AATATT	1 cut(s)	733
SspMI	CTAG	5 cut(s)	173, 183, 590, 777, 1763
StuI	AGGCCT	1 cut(s)	1185
StyD4I	CCNGG	1 cut(s)	1194
StyI	CCWWGG	1 cut(s)	1120
TaaI	ACNGT	3 cut(s)	540, 614, 701
TaiI	ACGT	1 cut(s)	1368
TaqI	TCGA	5 cut(s)	67, 189, 248, 512, 1247
TatI	WGTACW	1 cut(s)	1710
TfiI	GAWTC	2 cut(s)	26, 64
Tru1I	TTAA	6 cut(s)	84, 636, 854, 879, 1329, 1790
Tru9I	TTAA	6 cut(s)	84, 636, 854, 879, 1329, 1790
TscAI	CASTG	3 cut(s)	366, 706, 1594
TseFI	GTSAC	2 cut(s)	616, 1474
TseI	GCWGC	1 cut(s)	123
Tsp45I	GTSAC	2 cut(s)	616, 1474
TspDTI	ATGAA	3 cut(s)	500, 1010, 1233
TspGWI	ACGGA	2 cut(s)	959, 1547
TspRI	CASTG	3 cut(s)	366, 706, 1594
VpaK11BI	GGWCC	1 cut(s)	599
XapI	RAATTY	4 cut(s)	145, 568, 1220, 1523
XceI	RCATGY	1 cut(s)	746
XmnI	GAANNNNTTC	2 cut(s)	1224, 1641
XspI	CTAG	5 cut(s)	173, 183, 590, 777, 1763
ZrmI	AGTACT	1 cut(s)	1712
Zsp2I	ATGCAT	2 cut(s)	748, 1384

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.