Rw7G013860

WD repeat-containing protein

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Forward (+)
13322160 .. 13330206
8047 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G013860.1

Sequence Viewer

Length: 3786 bp
ATGGCTGATTCATTTGGTCGGTTACAGTTGGTTTCACTACCAAAGGAGCCGCACCAAGATAGGGAGGGAGGGACTGGTTCGCATACAGGTTCTCAGATGGAAAACACGGTTTGTGCTGAGGGATTAAGTGAGGGAGGACAGGTAATGTCAATAGCGACCTGTGAGAATGTTATTGCCTTTGTGTTAAAAAGTCGCTGCATATTTAGGCTATTGCCTACGGGTACTATAATAGGAGAGATTTCTTTCATGGACAACAATCTCGTTTGTAAAGAAAGTAACTCCACTCAGTCACATTTTGTGGGAGGGATCTTTCTTAAAACTGAAGATTTAGAAGCCCAAGAACCCCATGGAATCTTTTCAAGAACTTTTGCCGTTTGGAATAACACAGGTCTTTCAATTGTCTACTTGATATCCTATGTCAGAGATACTTTCAAGTGCGAGCGTCTTTGTGAGATTCCTGCTTCCACTTATCCTCTAGATGTGAGACTATCAGTCAGCTTCATTCAGTTGAGCCATTATATTCTTCGGATTGAATCAGTTTGCTTAATTGGTGAAGAACATTTGCAGTGGAAACCCCACATCACGATATGGTCTACATGTTGGAAACATGATGACCATGGTAAATTCTGCCTATCATTTAAACTGCATGGAGTAGGCCGTTCTTTTGTTGACTGGACTGCAAATTCTATGCCAAGTAATCAATCTGAGGTTATGCAGACCAAACTGACTTCTTCATACCCTTTTGTTTCAAGCTCCGGAAGTTTAAATAATTTACATGCAGAAAATGACAATCTTGGCTTAGTTAATAAGCAAGGGATGGTGTCTTCTTCCATGGTTATCTCAGAAACTTTCTTTGTTCCTTATGCTGTTGTGTATGGCTTCTCTAGTGGAGAAATAGAAATGGTACGGTTTGATTTGTTGGAGGGCCTGGCTTCTCTTGGTGGAAGTCCACGTCATGAGGCGAAGTCATATATGTCCAGACAGCTCTTTTTGGGGCACACAGGTGCTGTGCTCTGCTTGGCAGCACACAGGATGGTAGGTGTTGCCAAAGGATGGAGTTTCAATCAGGTTTTGGTGTCTGGAAGCATGGATTGCACAGTCCGCATATGGGATCTTGACACTGGGAATCTTATCACAGTAATGCACCAGCATGTGGGCCCAGTTCGGCAAATAATTCTTCCCCCAGCTCGTACTTACCGTCCTTGGAGCGACTGTTTTCTCTCAGTTGGGGAGGACTCATGTGTAGCACTTGCTTCTCTCGAGACTTTGCGAGCAGAGAGAATTTTTCCTGGACATCCCAGCTATCCTGCAAAAGTTGTATGGGACACTGGAAGAGGTTATATTGCATGCTTGTGCCGAAACCATTCAGGAACATCTGATACCGTTGATATCTTGTACATATGGGATGTAAAGACAGGTGCTCGAGAGCGGGTCCTTCGAGGGACGGCATCTCATTCAATGTTTGACCATTTCTGTCAAGGCATCAGCATGAATTCCATTTCTGGCAGTGCATTGAATGGAAATACCTCGGTTTCTTCATTACTTCTTCCAGTAATTGAAGATGGGGCTTCTACGCACTCTCATTTCAATAGTTCGGACAAATTGGCCACTTCATCAAATGTGGTGCCTGGTAATACTGCTGAGTCCAACACTTCCAGAGTCAGTAAAGGTGATTCTGAAAAATTATTTTCAGCCCCTCAAATGGCCATTCAGAGCCGCAAGCATCCAATCACATGCTCTTGCCCTTTCCCAGGAATTGCTGCTCTCAGTTTTGATCTTGCATCATTAGTGTTTCCTTATCAGAAGGATGACCTTATACCAAATAGCCGTGATAAGAAAGAGGATAATGGTGGCAAGGGACAGGGATTTGGGACACCAAGTCCCCAGCACAAGCCTGTAGATAATGGTTCTGGTGTGCATACGACCTCAAATGATACTGTTCAAGAGATTGAATGGATTAGAACACTTGAAGAATGTTTACTTCGATTTAGCTTGGGATTCTTGCACTTGTGGAATGTAGATTCTGAGCTTGATAACTTGCTTATAACTGATCTAAATCTGAAGAGACCAGATAATTTTTTTCTCGCTTCTGGTTTTCAAGGTGACAAAGGGTCTTTGACGTTGACATTTCCTAATTTGAATGCTATTCTTGAGCTCTGGAGAATGTCATCGGAGTTTTGTGCAATCAGGTCACTGACGATGGTGTCTCTTGCCCAACGCATGATTAGCTTGTCGCATGCCAGTTCAAATGCCAGCAGTGCTTTAGCAGCATTTTATACTAGGAACTTTGCAGAGAAAATTCCAGATATAAAGCCGCCTTTACTTCAGCTTTTGGTGAGTTTTTGGCAAGACGAAAGTGAACATGTACGTATGGCTGCACGCTCTTTATTCCACTGTGCTGCTTCTCGAGCAATTCCGCTTCCCCTATGCAGTCAAAAAGCTAATGGCCACTTGAATCTGAGCTCTATAAGTGGTCCTGGAGAGACTGAACATGTAAATTCAAACATAGAAGAAGCATCTACCAACTTATTGTCTTTTAAGTCTGAAGAATTGAATATACATGCATGGCTGGAATCATTTGAAATGCAAGACTGGATTTCTTGTGTTGGGGGGACAAGCCAAGATGCGATGACATCTCATATTATTGTTGCAGCAGCATTGGCTATCTGGTACCCTAGTCTTGTAAAGCCATGTCTTGCCATGCTAGTAGTTCATCCATTGATGAAGCTGGTTATGGCCATGAATGAGAAATATAGTTCAACCGCAGCAGAGCTCCTTGCTGAAGGTATGGAGAGTACATGGAAAGAATGCATCAGTTCTGAAATACCTCGTCTGATTGGGGATATATTTTTCCAGATAGAGTGTGTAAGTGGCCCATCTGCCTATTCATCCTCACAAAATTTGGCTGTTTCAATTGGTCTTCGAGACACATTGGTTGGTGTTCTTCTTCCAAGTTTAGCTATGGCTGATGTACCAGGGTTTTTAGCTGTTATGGAGAGCCAAATCTGGTCTACTGCATCTGATTCACCTGTTCATTTAGTATCTCTAATGACTCTGATGAGGGTTGTGCGTGGTTCTCCAAGACACCTAGCTCAATACCTAGATAAGGTTATTGACTTCATATTACTAACTGTCGACCCTAGCAACTCAGTCATGCGCAAAACTTGCTTTCAAAGTTCAATGTCTGCTTTAAAGGAAGTTGCACGTGCATTCCCTATGGTAGCGCTGAATGATACATGGACCAAGTTGGCTGTTGGTGATGTGATTGGAGAGAAAAACAATGCTAGCATTCGGGTGTATGACATGCAAAGTATTATAAAGATAAAAATTTTGGATGCAAGCGGACCTCCCGGACTTCCAAATTTGCTTGTGGCCGGTTCAGAAATGAAACTAGTTACCGCAATTTCAGCTTTGAACTTCTCCCCAGATGGAGAGGGGTTGGTTGCTTTTTCGGAGCATGGGTTGATGATCAGATGGTGGTCATTGGGATCTGTGTGGTGGGAGAAACTGAGTCGAAATTTAGTTCCTGTCCAGTGCACAAAATTAATCTTTGTTCCCCCTTGGGAGGGATTCTCGCCTAATTCTACGAGGTCAAGCATAATGGCAAGCATTATGGGACATGATCGGCAAGCCAATATCCAGGAGAATGCAAAAGGTTTGAGTCAGGCGGACAATTTGAAACTATTGATTCATAATCTCGAACTATCTTATCGACTAGAATGGGTTGGTGAACGAAAAGTACATCTTACGAGGCATGGCCATGAGTTGGGCACTTTCCAGTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1261

Amino Acids

138.67

Weight (kDa)

6.0

Isoelectric Point (pI)

40.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_WDR3_1st PF25173 327 - 432 5e-06 WDR3 first beta-propeller domain
WD40_Prp19 PF24814 329 - 424 3.6e-06 Prp19 WD40 domain
Beta-prop_WDR5 PF25175 355 - 391 1.3e-06 WDR5 beta-propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2045, 3317
AasI GACNNNNNNGTC 1 cut(s) 2203
Acc16I TGCGCA 1 cut(s) 3158
Acc65I GGTACC 1 cut(s) 2670
AccB1I GGYRCC 2 cut(s) 1624, 2670
AccB7I CCANNNNNTGG 3 cut(s) 1053, 1153, 3766
AccBSI CCGCTC 1 cut(s) 1429
AccI GTMKAC 4 cut(s) 402, 593, 3011, 3135
AccIII TCCGGA 1 cut(s) 755
AclWI GGATC 3 cut(s) 314, 1119, 3496
AcoI YGGCCR 6 cut(s) 1605, 1704, 2446, 2736, 3372, 3757
AcuI CTGAAG 5 cut(s) 342, 2081, 2309, 2565, 2802
AcvI CACGTG 1 cut(s) 3206
AfaI GTAC 9 cut(s) 223, 906, 1192, 1397, 2367, 2672, 2797, 2973, 3741
AfeI AGCGCT 1 cut(s) 3225
AflIII ACRYGT 3 cut(s) 596, 2362, 2491
AhdI GACNNNNNGTC 3 cut(s) 491, 1878, 2110
AhlI ACTAGT 1 cut(s) 3391
AjiI CACGTC 1 cut(s) 953
AjnI CCWGG 7 cut(s) 927, 1288, 1627, 1750, 2476, 2974, 3639
AleI CACNNNNGTG 1 cut(s) 1002
Alw21I GWGCWC 6 cut(s) 1014, 1423, 2157, 2465, 2775, 3539
Alw26I GTCTC 6 cut(s) 478, 1256, 2059, 2211, 2477, 2919
Alw44I GTGCAC 1 cut(s) 3535
AlwI GGATC 3 cut(s) 314, 1119, 3496
AlwNI CAGNNNCTG 1 cut(s) 1007
Ama87I CYCGRG 3 cut(s) 1259, 1422, 2406
Aor13HI TCCGGA 1 cut(s) 755
Aor51HI AGCGCT 1 cut(s) 3225
ApaI GGGCCC 1 cut(s) 1160
ApaLI GTGCAC 1 cut(s) 3535
ApeKI GCWGC 9 cut(s) 195, 1022, 1760, 2267, 2375, 2399, 2651, 2654, 2765
AseI ATTAAT 1 cut(s) 3545
Asp700I GAANNNNTTC 2 cut(s) 355, 1363
Asp718I GGTACC 1 cut(s) 2670
AspLEI GCGC 2 cut(s) 3159, 3226
AspS9I GGNCC 8 cut(s) 925, 1156, 1157, 1432, 2474, 2873, 3240, 3344
AsuC2I CCSGG 1 cut(s) 3351
AsuHPI GGTGA 7 cut(s) 563, 1682, 2114, 2347, 3018, 3269, 3740
AsuNHI GCTAGC 1 cut(s) 3284
AvaI CYCGRG 3 cut(s) 1259, 1422, 2406
AvaII GGWCC 4 cut(s) 1432, 2474, 3240, 3344
BaeGI GKGCMC 4 cut(s) 999, 1160, 3539, 3773
BaeI ACNNNNGTAYC 2 cut(s) 2662, 2695
BalI TGGCCA 5 cut(s) 1607, 1706, 2448, 2738, 3759
BanI GGYRCC 2 cut(s) 1624, 2670
BanII GRGCYC 4 cut(s) 1160, 2157, 2465, 2775
BarI GAAGNNNNNNTAC 2 cut(s) 1962, 1994
BbrPI CACGTG 1 cut(s) 3206
BbsI GAAGAC 2 cut(s) 816, 2912
Bbv12I GWGCWC 6 cut(s) 1014, 1423, 2157, 2465, 2775, 3539
BbvCI CCTCAGC 1 cut(s) 117
BbvI GCAGC 9 cut(s) 182, 1034, 1747, 2279, 2362, 2386, 2663, 2666, 2777
BccI CCATC 9 cut(s) 91, 811, 1027, 1047, 1556, 2194, 2884, 3422, 3468
BceAI ACGGC 4 cut(s) 356, 642, 1461, 1812
BciT130I CCWGG 7 cut(s) 929, 1290, 1629, 1752, 2478, 2976, 3641
BclI TGATCA 1 cut(s) 3468
BcnI CCSGG 1 cut(s) 3351
BcoDI GTCTC 6 cut(s) 478, 1256, 2059, 2211, 2477, 2919
BcuI ACTAGT 1 cut(s) 3391
BfmI CTRYAG 1 cut(s) 1896
BfoI RGCGCY 1 cut(s) 3227
Bme1390I CCNGG 8 cut(s) 929, 1290, 1629, 1752, 2478, 2976, 3351, 3641
Bme18I GGWCC 4 cut(s) 1432, 2474, 3240, 3344
BmeRI GACNNNNNGTC 3 cut(s) 491, 1878, 2110
BmeT110I CYCGRG 3 cut(s) 1259, 1422, 2406
BmgBI CACGTC 1 cut(s) 953
BmgT120I GGNCC 8 cut(s) 925, 1156, 1157, 1432, 2474, 2873, 3240, 3344
BmiI GGNNCC 5 cut(s) 48, 1158, 1433, 1626, 2672
BmrFI CCNGG 8 cut(s) 929, 1290, 1629, 1752, 2478, 2976, 3351, 3641
BmrI ACTGGG 2 cut(s) 1131, 1154
BmsI GCATC 9 cut(s) 1457, 1491, 1732, 1790, 2525, 2614, 2820, 3026, 3325
BmtI GCTAGC 1 cut(s) 3288
BmuI ACTGGG 2 cut(s) 1131, 1154
BpiI GAAGAC 2 cut(s) 816, 2912
BplI GAGNNNNNCTC 2 cut(s) 3557, 3589
BpmI CTGGAG 2 cut(s) 2179, 2499
Bpu10I CCTNAGC 1 cut(s) 117
BpuEI CTTGAG 1 cut(s) 2171
BpuMI CCSGG 1 cut(s) 3351
BsaAI YACGTR 2 cut(s) 2369, 3206
BsaBI GATNNNNATC 1 cut(s) 2055
BsaI GGTCTC 1 cut(s) 2059
BsaJI CCNNGG 8 cut(s) 346, 616, 831, 1202, 1527, 1750, 2975, 3560
BsaWI WCCGGW 1 cut(s) 755
BsaXI ACNNNNNCTCC 6 cut(s) 126, 156, 1198, 1228, 3446, 3476
Bse118I RCCGGY 1 cut(s) 3374
Bse8I GATNNNNATC 1 cut(s) 2055
BseAI TCCGGA 1 cut(s) 755
BseBI CCWGG 7 cut(s) 929, 1290, 1629, 1752, 2478, 2976, 3641
BseDI CCNNGG 8 cut(s) 346, 616, 831, 1202, 1527, 1750, 2975, 3560
BseJI GATNNNNATC 1 cut(s) 2055
BseSI GKGCMC 4 cut(s) 999, 1160, 3539, 3773
BseXI GCAGC 9 cut(s) 182, 1034, 1747, 2279, 2362, 2386, 2663, 2666, 2777
BseYI CCCAGC 3 cut(s) 1183, 1298, 1884
BsgI GTGCAG 1 cut(s) 2361
BshNI GGYRCC 2 cut(s) 1624, 2670
BsiHKAI GWGCWC 6 cut(s) 1014, 1423, 2157, 2465, 2775, 3539
BsiHKCI CYCGRG 3 cut(s) 1259, 1422, 2406
BsiSI CCGG 3 cut(s) 756, 3351, 3375
BslFI GGGAC 8 cut(s) 85, 1337, 1456, 1866, 1872, 1885, 2626, 3630
BsmAI GTCTC 6 cut(s) 478, 1256, 2059, 2211, 2477, 2919
BsmFI GGGAC 8 cut(s) 85, 1337, 1456, 1866, 1872, 1885, 2626, 3630
BsmI GAATGC 5 cut(s) 2146, 2813, 3209, 3288, 3652
Bso31I GGTCTC 1 cut(s) 2059
BsoBI CYCGRG 3 cut(s) 1259, 1422, 2406
Bsp120I GGGCCC 1 cut(s) 1156
Bsp1286I GDGCHC 9 cut(s) 999, 1014, 1160, 1423, 2157, 2465, 2775, 3539, 3773
Bsp13I TCCGGA 1 cut(s) 755
Bsp1407I TGTACA 1 cut(s) 1395
Bsp143I GATC 7 cut(s) 306, 1111, 1774, 2050, 3468, 3488, 3622
Bsp19I CCATGG 3 cut(s) 346, 616, 831
BspEI TCCGGA 1 cut(s) 755
BspHI TCATGA 1 cut(s) 955
BspLI GGNNCC 5 cut(s) 48, 1158, 1433, 1626, 2672
BspOI GCTAGC 1 cut(s) 3288
BspPI GGATC 3 cut(s) 314, 1119, 3496
BspT107I GGYRCC 2 cut(s) 1624, 2670
BspTNI GGTCTC 1 cut(s) 2059
BsrBI CCGCTC 1 cut(s) 1429
BsrFI RCCGGY 1 cut(s) 3374
BsrGI TGTACA 1 cut(s) 1395
BssAI RCCGGY 1 cut(s) 3374
BssECI CCNNGG 8 cut(s) 346, 616, 831, 1202, 1527, 1750, 2975, 3560
BssMI GATC 7 cut(s) 306, 1111, 1774, 2050, 3468, 3488, 3622
BssT1I CCWWGG 5 cut(s) 346, 616, 831, 1202, 3560
Bst2UI CCWGG 7 cut(s) 929, 1290, 1629, 1752, 2478, 2976, 3641
Bst6I CTCTTC 2 cut(s) 1327, 2057
BstAPI GCANNNNNTGC 2 cut(s) 1092, 3165
BstAUI TGTACA 1 cut(s) 1395
BstBAI YACGTR 2 cut(s) 2369, 3206
BstDSI CCRYGG 3 cut(s) 346, 616, 831
BstENI CCTNNNNNAGG 2 cut(s) 1749, 3104
BstH2I RGCGCY 1 cut(s) 3227
BstHHI GCGC 2 cut(s) 3159, 3226
BstKTI GATC 7 cut(s) 309, 1114, 1777, 2053, 3471, 3491, 3625
BstMAI GTCTC 6 cut(s) 478, 1256, 2059, 2211, 2477, 2919
BstMBI GATC 7 cut(s) 306, 1111, 1774, 2050, 3468, 3488, 3622
BstMWI GCNNNNNNNGC 9 cut(s) 1092, 1101, 2226, 2258, 2267, 2408, 2660, 3165, 3407
BstNI CCWGG 7 cut(s) 929, 1290, 1629, 1752, 2478, 2976, 3641
BstSCI CCNGG 8 cut(s) 927, 1288, 1627, 1750, 2476, 2974, 3349, 3639
BstSFI CTRYAG 1 cut(s) 1896
BstSLI GKGCMC 4 cut(s) 999, 1160, 3539, 3773
BstSNI TACGTA 1 cut(s) 2369
BstV1I GCAGC 9 cut(s) 182, 1034, 1747, 2279, 2362, 2386, 2663, 2666, 2777
BstV2I GAAGAC 2 cut(s) 816, 2912
BstX2I RGATCY 3 cut(s) 306, 1111, 3488
BstYI RGATCY 3 cut(s) 306, 1111, 3488
BtgI CCRYGG 3 cut(s) 346, 616, 831
BtgZI GCGATG 1 cut(s) 2642
BtrI CACGTC 1 cut(s) 953
BtsI GCAGTG 3 cut(s) 572, 1513, 2263
BtsIMutI CAGTG 8 cut(s) 572, 1119, 1326, 1513, 2192, 2263, 2392, 3539
CaiI CAGNNNCTG 1 cut(s) 1007
CciI TCATGA 1 cut(s) 955
CfoI GCGC 2 cut(s) 3159, 3226
Cfr10I RCCGGY 1 cut(s) 3374
Cfr13I GGNCC 8 cut(s) 925, 1156, 1157, 1432, 2474, 2873, 3240, 3344
CseI GACGC 1 cut(s) 431
Csp6I GTAC 9 cut(s) 222, 905, 1191, 1396, 2366, 2671, 2796, 2972, 3740
CviQI GTAC 9 cut(s) 222, 905, 1191, 1396, 2366, 2671, 2796, 2972, 3740
DpnI GATC 7 cut(s) 308, 1113, 1776, 2052, 3470, 3490, 3624
DpnII GATC 7 cut(s) 306, 1111, 1774, 2050, 3468, 3488, 3622
DraI TTTAAA 3 cut(s) 640, 765, 3192
DrdI GACNNNNNNGTC 1 cut(s) 2203
DriI GACNNNNNGTC 3 cut(s) 491, 1878, 2110
DseDI GACNNNNNNGTC 1 cut(s) 2203
EaeI YGGCCR 6 cut(s) 1605, 1704, 2446, 2736, 3372, 3757
Eam1104I CTCTTC 2 cut(s) 1327, 2057
Eam1105I GACNNNNNGTC 3 cut(s) 491, 1878, 2110
EarI CTCTTC 2 cut(s) 1327, 2057
EciI GGCGGA 1 cut(s) 3683
Ecl136II GAGCTC 3 cut(s) 2155, 2463, 2773
Eco105I TACGTA 1 cut(s) 2369
Eco130I CCWWGG 5 cut(s) 346, 616, 831, 1202, 3560
Eco24I GRGCYC 4 cut(s) 1160, 2157, 2465, 2775
Eco31I GGTCTC 1 cut(s) 2059
Eco32I GATATC 2 cut(s) 411, 1390
Eco47I GGWCC 4 cut(s) 1432, 2474, 3240, 3344
Eco47III AGCGCT 1 cut(s) 3225
Eco53kI GAGCTC 3 cut(s) 2155, 2463, 2773
Eco57I CTGAAG 5 cut(s) 342, 2081, 2309, 2565, 2802
Eco72I CACGTG 1 cut(s) 3206
Eco88I CYCGRG 3 cut(s) 1259, 1422, 2406
EcoICRI GAGCTC 3 cut(s) 2155, 2463, 2773
EcoNI CCTNNNNNAGG 2 cut(s) 1749, 3104
EcoO109I RGGNCCY 2 cut(s) 925, 1432
EcoRI GAATTC 1 cut(s) 1492
EcoRII CCWGG 7 cut(s) 927, 1288, 1627, 1750, 2476, 2974, 3639
EcoRV GATATC 2 cut(s) 411, 1390
EcoT14I CCWWGG 5 cut(s) 346, 616, 831, 1202, 3560
EcoT22I ATGCAT 2 cut(s) 2566, 2813
EcoT38I GRGCYC 4 cut(s) 1160, 2157, 2465, 2775
ErhI CCWWGG 5 cut(s) 346, 616, 831, 1202, 3560
FalI AAGNNNNNCTT 2 cut(s) 3729, 3761
FaqI GGGAC 8 cut(s) 85, 1337, 1456, 1866, 1872, 1885, 2626, 3630
FauI CCCGC 1 cut(s) 1422
FauNDI CATATG 2 cut(s) 1106, 1400
FbaI TGATCA 1 cut(s) 3468
FblI GTMKAC 4 cut(s) 402, 593, 3011, 3135
FriOI GRGCYC 4 cut(s) 1160, 2157, 2465, 2775
FspI TGCGCA 1 cut(s) 3158
GlaI GCGC 2 cut(s) 3158, 3225
GsaI CCCAGC 3 cut(s) 1187, 1302, 1888
GsuI CTGGAG 2 cut(s) 2179, 2499
HaeII RGCGCY 1 cut(s) 3227
HapII CCGG 3 cut(s) 756, 3351, 3375
HgaI GACGC 1 cut(s) 431
HhaI GCGC 2 cut(s) 3159, 3226
Hin6I GCGC 2 cut(s) 3157, 3224
HinP1I GCGC 2 cut(s) 3157, 3224
HincII GTYRAC 3 cut(s) 670, 2124, 3136
HindII GTYRAC 3 cut(s) 670, 2124, 3136
HpaII CCGG 3 cut(s) 756, 3351, 3375
HphI GGTGA 7 cut(s) 563, 1682, 2114, 2347, 3018, 3269, 3740
HpyAV CCTTC 3 cut(s) 1445, 1798, 2777
HpyCH4IV ACGT 4 cut(s) 952, 2120, 2368, 3205
HpyF10VI GCNNNNNNNGC 9 cut(s) 1092, 1101, 2226, 2258, 2267, 2408, 2660, 3165, 3407
HpySE526I ACGT 4 cut(s) 952, 2120, 2368, 3205
HspAI GCGC 2 cut(s) 3157, 3224
Kpn2I TCCGGA 1 cut(s) 755
KpnI GGTACC 1 cut(s) 2674
Ksp22I TGATCA 1 cut(s) 3468
Kzo9I GATC 7 cut(s) 306, 1111, 1774, 2050, 3468, 3488, 3622
LmnI GCTCC 5 cut(s) 46, 758, 1206, 2778, 3454
Lsp1109I GCAGC 9 cut(s) 182, 1034, 1747, 2279, 2362, 2386, 2663, 2666, 2777
LweI GCATC 9 cut(s) 1457, 1491, 1732, 1790, 2525, 2614, 2820, 3026, 3325
MaeII ACGT 4 cut(s) 952, 2120, 2368, 3205
MaeIII GTNAC 6 cut(s) 21, 275, 288, 2102, 2190, 3394
MalI GATC 7 cut(s) 308, 1113, 1776, 2052, 3470, 3490, 3624
MbiI CCGCTC 1 cut(s) 1429
MboI GATC 7 cut(s) 306, 1111, 1774, 2050, 3468, 3488, 3622
MfeI CAATTG 2 cut(s) 396, 2913
MflI RGATCY 3 cut(s) 306, 1111, 3488
MhlI GDGCHC 9 cut(s) 999, 1014, 1160, 1423, 2157, 2465, 2775, 3539, 3773
MlsI TGGCCA 5 cut(s) 1607, 1706, 2448, 2738, 3759
MluNI TGGCCA 5 cut(s) 1607, 1706, 2448, 2738, 3759
MlyI GAGTC 6 cut(s) 1229, 1652, 1668, 3046, 3520, 3670
MmeI TCCRAC 3 cut(s) 581, 900, 1671
Mox20I TGGCCA 5 cut(s) 1607, 1706, 2448, 2738, 3759
Mph1103I ATGCAT 2 cut(s) 2566, 2813
MroI TCCGGA 1 cut(s) 755
MroXI GAANNNNTTC 2 cut(s) 355, 1363
MscI TGGCCA 5 cut(s) 1607, 1706, 2448, 2738, 3759
MslI CAYNNNNRTG 7 cut(s) 1002, 1139, 1149, 1351, 1487, 3293, 3759
Msp20I TGGCCA 5 cut(s) 1607, 1706, 2448, 2738, 3759
MspI CCGG 3 cut(s) 756, 3351, 3375
MspR9I CCNGG 8 cut(s) 929, 1290, 1629, 1752, 2478, 2976, 3351, 3641
MunI CAATTG 2 cut(s) 396, 2913
Mva1269I GAATGC 5 cut(s) 2146, 2813, 3209, 3288, 3652
MvaI CCWGG 7 cut(s) 929, 1290, 1629, 1752, 2478, 2976, 3641
MwoI GCNNNNNNNGC 9 cut(s) 1092, 1101, 2226, 2258, 2267, 2408, 2660, 3165, 3407
NciI CCSGG 1 cut(s) 3351
NcoI CCATGG 3 cut(s) 346, 616, 831
NdeI CATATG 2 cut(s) 1106, 1400
NdeII GATC 7 cut(s) 306, 1111, 1774, 2050, 3468, 3488, 3622
NheI GCTAGC 1 cut(s) 3284
NlaIV GGNNCC 5 cut(s) 48, 1158, 1433, 1626, 2672
NmuCI GTSAC 3 cut(s) 288, 2102, 2190
NsbI TGCGCA 1 cut(s) 3158
NsiI ATGCAT 2 cut(s) 2566, 2813
OliI CACNNNNGTG 1 cut(s) 1002
PaeI GCATGC 2 cut(s) 1350, 2240
PaeR7I CTCGAG 3 cut(s) 1259, 1422, 2406
PagI TCATGA 1 cut(s) 955
PciI ACATGT 3 cut(s) 596, 2362, 2491
PcsI WCGNNNNNNNCGW 1 cut(s) 1195
PctI GAATGC 5 cut(s) 2146, 2813, 3209, 3288, 3652
PdmI GAANNNNTTC 2 cut(s) 355, 1363
PflMI CCANNNNNTGG 3 cut(s) 1053, 1153, 3766
PfoI TCCNGGA 4 cut(s) 1288, 2476, 3349, 3639
PleI GAGTC 6 cut(s) 1229, 1651, 1667, 3046, 3519, 3669
PmaCI CACGTG 1 cut(s) 3206
PmlI CACGTG 1 cut(s) 3206
PpsI GAGTC 6 cut(s) 1229, 1651, 1667, 3046, 3519, 3669
Ppu21I YACGTR 2 cut(s) 2369, 3206
PpuMI RGGWCCY 1 cut(s) 1432
PscI ACATGT 3 cut(s) 596, 2362, 2491
PshBI ATTAAT 1 cut(s) 3545
PsiI TTATAA 2 cut(s) 2045, 3317
Psp124BI GAGCTC 3 cut(s) 2157, 2465, 2775
Psp5II RGGWCCY 1 cut(s) 1432
Psp6I CCWGG 7 cut(s) 927, 1288, 1627, 1750, 2476, 2974, 3639
PspCI CACGTG 1 cut(s) 3206
PspFI CCCAGC 3 cut(s) 1183, 1298, 1884
PspGI CCWGG 7 cut(s) 927, 1288, 1627, 1750, 2476, 2974, 3639
PspN4I GGNNCC 5 cut(s) 48, 1158, 1433, 1626, 2672
PspOMI GGGCCC 1 cut(s) 1156
PspPI GGNCC 8 cut(s) 925, 1156, 1157, 1432, 2474, 2873, 3240, 3344
PspPPI RGGWCCY 1 cut(s) 1432
PsrI GAACNNNNNNTAC 4 cut(s) 1363, 1395, 3723, 3755
PstNI CAGNNNCTG 1 cut(s) 1007
PsuI RGATCY 3 cut(s) 306, 1111, 3488
RsaI GTAC 9 cut(s) 223, 906, 1192, 1397, 2367, 2672, 2797, 2973, 3741
RsaNI GTAC 9 cut(s) 222, 905, 1191, 1396, 2366, 2671, 2796, 2972, 3740
RseI CAYNNNNRTG 7 cut(s) 1002, 1139, 1149, 1351, 1487, 3293, 3759
SacI GAGCTC 3 cut(s) 2157, 2465, 2775
SalI GTCGAC 1 cut(s) 3134
Sau3AI GATC 7 cut(s) 306, 1111, 1774, 2050, 3468, 3488, 3622
Sau96I GGNCC 8 cut(s) 925, 1156, 1157, 1432, 2474, 2873, 3240, 3344
SchI GAGTC 6 cut(s) 1229, 1652, 1668, 3046, 3520, 3670
ScrFI CCNGG 8 cut(s) 929, 1290, 1629, 1752, 2478, 2976, 3351, 3641
SduI GDGCHC 9 cut(s) 999, 1014, 1160, 1423, 2157, 2465, 2775, 3539, 3773
SfaNI GCATC 9 cut(s) 1457, 1491, 1732, 1790, 2525, 2614, 2820, 3026, 3325
SfcI CTRYAG 1 cut(s) 1896
Sfr274I CTCGAG 3 cut(s) 1259, 1422, 2406
SinI GGWCC 4 cut(s) 1432, 2474, 3240, 3344
SlaI CTCGAG 3 cut(s) 1259, 1422, 2406
SmiMI CAYNNNNRTG 7 cut(s) 1002, 1139, 1149, 1351, 1487, 3293, 3759
SmlI CTYRAG 4 cut(s) 1259, 1422, 2150, 2406
SmoI CTYRAG 4 cut(s) 1259, 1422, 2150, 2406
SnaBI TACGTA 1 cut(s) 2369
SpeI ACTAGT 1 cut(s) 3391
SphI GCATGC 2 cut(s) 1350, 2240
SstI GAGCTC 3 cut(s) 2157, 2465, 2775
StyD4I CCNGG 8 cut(s) 927, 1288, 1627, 1750, 2476, 2974, 3349, 3639
StyI CCWWGG 5 cut(s) 346, 616, 831, 1202, 3560
TaiI ACGT 4 cut(s) 955, 2123, 2371, 3208
TatI WGTACW 3 cut(s) 1395, 2795, 3739
TauI GCSGC 3 cut(s) 52, 1719, 2317
TscAI CASTG 8 cut(s) 572, 1126, 1333, 1513, 2199, 2263, 2399, 3539
TseFI GTSAC 3 cut(s) 288, 2102, 2190
TseI GCWGC 9 cut(s) 195, 1022, 1760, 2267, 2375, 2399, 2651, 2654, 2765
Tsp45I GTSAC 3 cut(s) 288, 2102, 2190
TspRI CASTG 8 cut(s) 572, 1126, 1333, 1513, 2199, 2263, 2399, 3539
Van91I CCANNNNNTGG 3 cut(s) 1053, 1153, 3766
VneI GTGCAC 1 cut(s) 3535
VpaK11BI GGWCC 4 cut(s) 1432, 2474, 3240, 3344
VspI ATTAAT 1 cut(s) 3545
XagI CCTNNNNNAGG 2 cut(s) 1749, 3104
XbaI TCTAGA 1 cut(s) 475
XcmI CCANNNNNNNNNTGG 1 cut(s) 344
XhoI CTCGAG 3 cut(s) 1259, 1422, 2406
XmiI GTMKAC 4 cut(s) 402, 593, 3011, 3135
XmnI GAANNNNTTC 2 cut(s) 355, 1363
Zsp2I ATGCAT 2 cut(s) 2566, 2813
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.