AT1G02630

Equilibrative nucleotide transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0013473
Physical Location & Seq
Reverse (-)
560610 .. 562598
1989 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G02630.1

Sequence Viewer

Length: 1170 bp
ATGGTTGATGAGAAAGTGATTGTTGATGAAGTTGAGACAAGAGACGCTTATAGAGTTGCGTACGTGATCCATTTCTTGTTGGGTGCTGGTAGTTTAATACCATGGAACGCTTTGATCACTGCCGTTGATTACTTTGGCTACTTGTACCCGGACAAGCATGTAGAGAAGACTTTCACTGTGGCTTACATGAGCTGTTCGGTTCTTGTTTTGGTTTTGATGATGACTTGGAACACAAGGATGAGCTACAGAGTGAGGATGAACTTGGGGTTTTCCATGTTCATCATCGCCATGATGATTTCTCCCCTTATAGATTGGGTCTGGAAAGGTGAAAAGGGTGAGAATGTTTCTTACATGTTGATGGTTGGATCAGTCGTACTCTGTGGTTTAGCTGATGGAGTGGTTGGAGGAAGTTTGATTGGTTCAGCCGGAAAGCTTCCTAGACAGTACATGCAAGCAATTTTTGCCGGCACTGCCTCTTCAGGTATTATCATCTCCCTCCTTAGGATTGCGACTAAAGCTTCGCTGCCACAAACACCGCAGGGGATGCGAACCAGTGCTCATTCCTATTTCATAGTCAGCTCTACCATCCTCCTATGTTGCTTCATTTCTTGTAACGTGCTACACAAGCTACCAGTAATGCAACAACACCTCAAGTTTCATCAACCTTTGCATTCGACTCTGACAATATGGATGGTTGGGAGGAAAATCAAGTGGCCAGCTTCGGGTATGCTAATAATCTACTCTGTTACCTTATCGATATTTCCAGGATTTATAGCTGAGAATTTGAAGTCCCAACTTCTCCAAAGTTGGTATCCCATTTTGCTCATCACTGTGTACAACATATCGGATTTCGTAGGCAAGTCACTCACCGCACTCTATCTATGGCAAAGTATAAAATCGGCTACATGGGCTTGTATCGTTAGGCTTCTCTTTTATCCTCTTTTCTCTGCATGTCTACGTGGACCAAAATGGTTAAGAACAGAAGTGCCAGTGGTTGTCTTGACGTTCATGCTAGGTCTTACCAACGGCTACCTCACTAGCGTGCTCATGATCATGGCTCCCAAAACGGTTCATGCATCAGAAGCAGAACTTGCAGCCATCTTCATGGTTGTTTTTCTAGGACTAGGTCTTGTTTGTGGCTCTGTTATTGGTTGGCTCTGGCTCATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Nucleoside_tran

Protein Analysis

389

Amino Acids

43.34

Weight (kDa)

9.18

Isoelectric Point (pI)

31.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nucleoside_tran PF01733 122 - 218 9.6e-21 Nucleoside transporter
Nucleoside_tran PF01733 228 - 387 8.2e-38 Nucleoside transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013473)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02630 AT1G02630
fragaria_vesca FvH4_1g03060
malus_domestica MD02G1029900.v1.1 MD15G1171300.v1.1
prunus_persica Prupe.7G245000_v2.0.a1
pyrus_communis pycom02g02490 pycom15g15290
rosa_chinensis RchiOBHm_Chr2g0088191
rosa_laevigata RLG00000015930
rosa_multiflora Rmu_sc0003275.1_g000069
rosa_roxburghii Rroxscaffold_2G00152840
rosa_rugosa Rorug01G0481700
rosa_samantha Rh2AG036700 Rh2BG035900 Rh2CG037000 Rh2DG036400
rosa_wichuraiana Rw2G002890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 955
AciI CCGC 2 cut(s) 536, 870
AclWI GGATC 2 cut(s) 61, 373
AcoI YGGCCR 1 cut(s) 713
AcsI RAATTY 1 cut(s) 781
AcuI CTGAAG 1 cut(s) 462
AfaI GTAC 5 cut(s) 62, 146, 375, 446, 836
AfiI CCNNNNNNNGG 2 cut(s) 501, 722
AflIII ACRYGT 1 cut(s) 351
AgsI TTSAA 1 cut(s) 787
AjnI CCWGG 1 cut(s) 763
AleI CACNNNNGTG 1 cut(s) 1040
AluBI AGCT 9 cut(s) 192, 243, 389, 433, 518, 579, 628, 719, 776
AluI AGCT 9 cut(s) 192, 243, 389, 433, 518, 579, 628, 719, 776
Alw21I GWGCWC 2 cut(s) 559, 1047
Alw26I GTCTC 2 cut(s) 29, 36
AlwI GGATC 2 cut(s) 61, 373
AoxI GGCC 1 cut(s) 713
ApeKI GCWGC 2 cut(s) 523, 1094
ApoI RAATTY 1 cut(s) 781
ArsI GACNNNNNNTTYG 2 cut(s) 502, 534
Asp700I GAANNNNTTC 1 cut(s) 170
AspS9I GGNCC 1 cut(s) 962
AsuC2I CCSGG 1 cut(s) 149
AsuHPI GGTGA 3 cut(s) 338, 347, 859
AvaII GGWCC 1 cut(s) 962
AxyI CCTNAGG 1 cut(s) 500
BalI TGGCCA 1 cut(s) 715
BbsI GAAGAC 1 cut(s) 173
Bbv12I GWGCWC 2 cut(s) 559, 1047
BbvI GCAGC 2 cut(s) 510, 1106
BccI CCATC 5 cut(s) 352, 386, 593, 685, 1106
BceAI ACGGC 2 cut(s) 107, 1042
BciT130I CCWGG 1 cut(s) 765
BciVI GTATCC 1 cut(s) 822
BclI TGATCA 2 cut(s) 114, 1050
BcnI CCSGG 1 cut(s) 149
BcoDI GTCTC 2 cut(s) 29, 36
BfaI CTAG 5 cut(s) 438, 1013, 1038, 1118, 1124
BfmI CTRYAG 1 cut(s) 244
BfuI GTATCC 1 cut(s) 822
BisI GCNGC 2 cut(s) 524, 1095
BlsI GCNGC 2 cut(s) 525, 1096
Bme1390I CCNGG 2 cut(s) 149, 765
Bme18I GGWCC 1 cut(s) 962
BmgT120I GGNCC 1 cut(s) 962
BmiI GGNNCC 1 cut(s) 1059
BmrFI CCNGG 2 cut(s) 149, 765
BmsI GCATC 2 cut(s) 534, 1085
BpiI GAAGAC 1 cut(s) 173
BpuEI CTTGAG 1 cut(s) 635
BpuMI CCSGG 1 cut(s) 149
Bsa29I ATCGAT 1 cut(s) 755
BsaAI YACGTR 2 cut(s) 64, 959
BsaJI CCNNGG 1 cut(s) 101
Bsc4I CCNNNNNNNGG 2 cut(s) 501, 722
Bse118I RCCGGY 1 cut(s) 464
Bse1I ACTGG 3 cut(s) 552, 632, 989
Bse21I CCTNAGG 1 cut(s) 500
BseBI CCWGG 1 cut(s) 765
BseCI ATCGAT 1 cut(s) 755
BseDI CCNNGG 1 cut(s) 101
BseGI GGATG 5 cut(s) 243, 261, 549, 585, 696
BseLI CCNNNNNNNGG 2 cut(s) 501, 722
BseMII CTCAG 1 cut(s) 768
BseNI ACTGG 3 cut(s) 552, 632, 989
BseXI GCAGC 2 cut(s) 510, 1106
BshFI GGCC 1 cut(s) 715
BshVI ATCGAT 1 cut(s) 755
BsiHKAI GWGCWC 2 cut(s) 559, 1047
BsiSI CCGG 3 cut(s) 149, 426, 465
BsiWI CGTACG 1 cut(s) 60
BslFI GGGAC 1 cut(s) 775
BslI CCNNNNNNNGG 2 cut(s) 501, 722
BsmAI GTCTC 2 cut(s) 29, 36
BsmBI CGTCTC 1 cut(s) 36
BsmFI GGGAC 1 cut(s) 775
BsmI GAATGC 1 cut(s) 670
BsnI GGCC 1 cut(s) 715
Bsp1286I GDGCHC 2 cut(s) 559, 1047
Bsp1407I TGTACA 1 cut(s) 834
Bsp143I GATC 4 cut(s) 66, 114, 365, 1050
Bsp19I CCATGG 1 cut(s) 101
BspACI CCGC 2 cut(s) 536, 870
BspANI GGCC 1 cut(s) 715
BspCNI CTCAG 1 cut(s) 769
BspDI ATCGAT 1 cut(s) 755
BspHI TCATGA 1 cut(s) 1047
BspLI GGNNCC 1 cut(s) 1059
BspPI GGATC 2 cut(s) 61, 373
BsrFI RCCGGY 1 cut(s) 464
BsrGI TGTACA 1 cut(s) 834
BsrI ACTGG 3 cut(s) 552, 632, 989
BssAI RCCGGY 1 cut(s) 464
BssECI CCNNGG 1 cut(s) 101
BssMI GATC 4 cut(s) 66, 114, 365, 1050
BssT1I CCWWGG 1 cut(s) 101
Bst2UI CCWGG 1 cut(s) 765
Bst4CI ACNGT 4 cut(s) 178, 444, 832, 1069
Bst6I CTCTTC 1 cut(s) 481
BstAPI GCANNNNNTGC 3 cut(s) 461, 544, 1091
BstAUI TGTACA 1 cut(s) 834
BstBAI YACGTR 2 cut(s) 64, 959
BstC8I GCNNGC 4 cut(s) 453, 466, 717, 1043
BstDEI CTNAG 2 cut(s) 500, 777
BstDSI CCRYGG 1 cut(s) 101
BstF5I GGATG 5 cut(s) 243, 261, 549, 585, 696
BstKTI GATC 4 cut(s) 69, 117, 368, 1053
BstMAI GTCTC 2 cut(s) 29, 36
BstMBI GATC 4 cut(s) 66, 114, 365, 1050
BstMWI GCNNNNNNNGC 8 cut(s) 461, 470, 515, 544, 625, 908, 1082, 1091
BstNI CCWGG 1 cut(s) 765
BstNSI RCATGY 4 cut(s) 161, 355, 451, 954
BstSCI CCNGG 2 cut(s) 147, 763
BstSFI CTRYAG 1 cut(s) 244
BstV1I GCAGC 2 cut(s) 510, 1106
BstV2I GAAGAC 1 cut(s) 173
BstXI CCANNNNNNTGG 1 cut(s) 1105
Bsu15I ATCGAT 1 cut(s) 755
Bsu36I CCTNAGG 1 cut(s) 500
BsuI GTATCC 1 cut(s) 822
BsuRI GGCC 1 cut(s) 715
BsuTUI ATCGAT 1 cut(s) 755
BtgI CCRYGG 1 cut(s) 101
BtgZI GCGATG 1 cut(s) 268
BtsCI GGATG 5 cut(s) 243, 261, 549, 585, 696
BtsI GCAGTG 2 cut(s) 117, 468
BtsIMutI CAGTG 6 cut(s) 117, 174, 468, 559, 828, 996
Cac8I GCNNGC 4 cut(s) 453, 466, 717, 1043
CciI TCATGA 1 cut(s) 1047
Cfr10I RCCGGY 1 cut(s) 464
Cfr13I GGNCC 1 cut(s) 962
ClaI ATCGAT 1 cut(s) 755
CseI GACGC 1 cut(s) 53
Csp6I GTAC 5 cut(s) 61, 145, 374, 445, 835
CviQI GTAC 5 cut(s) 61, 145, 374, 445, 835
DdeI CTNAG 2 cut(s) 500, 777
DpnI GATC 4 cut(s) 68, 116, 367, 1052
DpnII GATC 4 cut(s) 66, 114, 365, 1050
EaeI YGGCCR 1 cut(s) 713
Eam1104I CTCTTC 1 cut(s) 481
EarI CTCTTC 1 cut(s) 481
Eco130I CCWWGG 1 cut(s) 101
Eco47I GGWCC 1 cut(s) 962
Eco57I CTGAAG 1 cut(s) 462
Eco81I CCTNAGG 1 cut(s) 500
EcoRII CCWGG 1 cut(s) 763
EcoT14I CCWWGG 1 cut(s) 101
EcoT22I ATGCAT 1 cut(s) 1078
ErhI CCWWGG 1 cut(s) 101
Esp3I CGTCTC 1 cut(s) 36
FalI AAGNNNNNCTT 4 cut(s) 31, 63, 1074, 1106
FaqI GGGAC 1 cut(s) 775
FbaI TGATCA 2 cut(s) 114, 1050
FblI GTMKAC 1 cut(s) 955
Fnu4HI GCNGC 2 cut(s) 524, 1095
FokI GGATG 5 cut(s) 250, 268, 556, 572, 703
Fsp4HI GCNGC 2 cut(s) 524, 1095
FspBI CTAG 5 cut(s) 438, 1013, 1038, 1118, 1124
GluI GCNGC 2 cut(s) 524, 1095
HaeIII GGCC 1 cut(s) 715
HapII CCGG 3 cut(s) 149, 426, 465
HgaI GACGC 1 cut(s) 53
HindIII AAGCTT 2 cut(s) 431, 516
HinfI GANTC 1 cut(s) 676
HpaII CCGG 3 cut(s) 149, 426, 465
HphI GGTGA 3 cut(s) 338, 347, 859
Hpy166II GTNNAC 3 cut(s) 835, 956, 962
Hpy188I TCNGA 4 cut(s) 681, 847, 1081, 1169
Hpy188III TCNNGA 3 cut(s) 319, 1000, 1048
Hpy8I GTNNAC 3 cut(s) 835, 956, 962
HpyCH4III ACNGT 4 cut(s) 178, 444, 832, 1069
HpyCH4IV ACGT 4 cut(s) 63, 615, 958, 1004
HpyCH4V TGCA 6 cut(s) 451, 640, 670, 950, 1076, 1094
HpyF10VI GCNNNNNNNGC 8 cut(s) 461, 470, 515, 544, 625, 908, 1082, 1091
HpyF3I CTNAG 2 cut(s) 500, 777
HpySE526I ACGT 4 cut(s) 63, 615, 958, 1004
KroI GCCGGC 1 cut(s) 464
KroNI GCCGGC 1 cut(s) 466
Ksp22I TGATCA 2 cut(s) 114, 1050
Kzo9I GATC 4 cut(s) 66, 114, 365, 1050
LmnI GCTCC 1 cut(s) 1063
Lsp1109I GCAGC 2 cut(s) 510, 1106
LweI GCATC 2 cut(s) 534, 1085
MaeI CTAG 5 cut(s) 438, 1013, 1038, 1118, 1124
MaeII ACGT 4 cut(s) 63, 615, 958, 1004
MaeIII GTNAC 3 cut(s) 611, 745, 861
MalI GATC 4 cut(s) 68, 116, 367, 1052
MboI GATC 4 cut(s) 66, 114, 365, 1050
MboII GAAGA 3 cut(s) 178, 468, 1093
MhlI GDGCHC 2 cut(s) 559, 1047
MlsI TGGCCA 1 cut(s) 715
MluCI AATT 2 cut(s) 456, 781
MluNI TGGCCA 1 cut(s) 715
MlyI GAGTC 1 cut(s) 670
MmeI TCCRAC 2 cut(s) 343, 382
MnlI CCTC 9 cut(s) 246, 398, 484, 506, 599, 659, 693, 948, 1043
Mox20I TGGCCA 1 cut(s) 715
Mph1103I ATGCAT 1 cut(s) 1078
MroNI GCCGGC 1 cut(s) 464
MroXI GAANNNNTTC 1 cut(s) 170
MscI TGGCCA 1 cut(s) 715
MseI TTAA 2 cut(s) 95, 974
MslI CAYNNNNRTG 7 cut(s) 236, 287, 356, 830, 1040, 1052, 1103
Msp20I TGGCCA 1 cut(s) 715
MspI CCGG 3 cut(s) 149, 426, 465
MspR9I CCNGG 2 cut(s) 149, 765
Mva1269I GAATGC 1 cut(s) 670
MvaI CCWGG 1 cut(s) 765
MwoI GCNNNNNNNGC 8 cut(s) 461, 470, 515, 544, 625, 908, 1082, 1091
NaeI GCCGGC 1 cut(s) 466
NciI CCSGG 1 cut(s) 149
NcoI CCATGG 1 cut(s) 101
NdeII GATC 4 cut(s) 66, 114, 365, 1050
NgoMIV GCCGGC 1 cut(s) 464
NlaIV GGNNCC 1 cut(s) 1059
NmuCI GTSAC 1 cut(s) 861
NsiI ATGCAT 1 cut(s) 1078
NspI RCATGY 4 cut(s) 161, 355, 451, 954
OliI CACNNNNGTG 1 cut(s) 1040
PagI TCATGA 1 cut(s) 1047
PciI ACATGT 1 cut(s) 351
PctI GAATGC 1 cut(s) 670
PdiI GCCGGC 1 cut(s) 466
PdmI GAANNNNTTC 1 cut(s) 170
Pfl23II CGTACG 1 cut(s) 60
PflFI GACNNNGTC 1 cut(s) 1125
PfoI TCCNGGA 1 cut(s) 763
PkrI GCNGC 2 cut(s) 525, 1096
PleI GAGTC 1 cut(s) 670
PpsI GAGTC 1 cut(s) 670
Ppu21I YACGTR 2 cut(s) 64, 959
PscI ACATGT 1 cut(s) 351
Psp6I CCWGG 1 cut(s) 763
PspGI CCWGG 1 cut(s) 763
PspLI CGTACG 1 cut(s) 60
PspN4I GGNNCC 1 cut(s) 1059
PspPI GGNCC 1 cut(s) 962
PsyI GACNNNGTC 1 cut(s) 1125
RsaI GTAC 5 cut(s) 62, 146, 375, 446, 836
RsaNI GTAC 5 cut(s) 61, 145, 374, 445, 835
RseI CAYNNNNRTG 7 cut(s) 236, 287, 356, 830, 1040, 1052, 1103
SaqAI TTAA 2 cut(s) 95, 974
SatI GCNGC 2 cut(s) 524, 1095
Sau3AI GATC 4 cut(s) 66, 114, 365, 1050
Sau96I GGNCC 1 cut(s) 962
SchI GAGTC 1 cut(s) 670
ScrFI CCNGG 2 cut(s) 149, 765
SduI GDGCHC 2 cut(s) 559, 1047
SfaNI GCATC 2 cut(s) 534, 1085
SfcI CTRYAG 1 cut(s) 244
SinI GGWCC 1 cut(s) 962
SmiMI CAYNNNNRTG 7 cut(s) 236, 287, 356, 830, 1040, 1052, 1103
SmlI CTYRAG 1 cut(s) 650
SmoI CTYRAG 1 cut(s) 650
Sse9I AATT 2 cut(s) 456, 781
SsiI CCGC 2 cut(s) 536, 870
SspMI CTAG 5 cut(s) 438, 1013, 1038, 1118, 1124
StyD4I CCNGG 2 cut(s) 147, 763
StyI CCWWGG 1 cut(s) 101
TaaI ACNGT 4 cut(s) 178, 444, 832, 1069
TaiI ACGT 4 cut(s) 66, 618, 961, 1007
TaqI TCGA 2 cut(s) 674, 755
TasI AATT 2 cut(s) 456, 781
TatI WGTACW 2 cut(s) 444, 834
Tru1I TTAA 2 cut(s) 95, 974
Tru9I TTAA 2 cut(s) 95, 974
TscAI CASTG 6 cut(s) 124, 181, 475, 559, 835, 996
TseFI GTSAC 1 cut(s) 861
TseI GCWGC 2 cut(s) 523, 1094
Tsp45I GTSAC 1 cut(s) 861
TspDTI ATGAA 9 cut(s) 42, 268, 272, 559, 592, 647, 997, 1061, 1093
TspRI CASTG 6 cut(s) 124, 181, 475, 559, 835, 996
Tth111I GACNNNGTC 1 cut(s) 1125
VpaK11BI GGWCC 1 cut(s) 962
XapI RAATTY 1 cut(s) 781
XceI RCATGY 4 cut(s) 161, 355, 451, 954
XmiI GTMKAC 1 cut(s) 955
XmnI GAANNNNTTC 1 cut(s) 170
XspI CTAG 5 cut(s) 438, 1013, 1038, 1118, 1124
Zsp2I ATGCAT 1 cut(s) 1078
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.