AT1G05150

TPR repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0013419
Physical Location & Seq
Reverse (-)
1484067 .. 1487027
2961 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G05150.1

Sequence Viewer

Length: 2427 bp
ATGGCGACTAGAGGAAGCAGATCGGAGAAAGTTAAGAGAATTTTCCAGCAATTCGACGGGAATCATGATGGTGGGCTTAACCGTGAAGAGATGGCGGCTCTTGTCGTAGCTGTTAACCCTAGGGTTAAATTCAGTGACGAGCAGATCAACGCCATTCTCGATGAAGTTTTTCGAACTTACGCTGAATTCATCGATCCAAACAAGGGTTTGACCTACGACGGTCTCCTACGTACTTACGACGACGGTGCCGGAGATGTTGACAGAGATTTCGACGCATTGGGGCTTGAGTTAAACGCTGATGAGACGACGATTAAAGGGTCTGAGGCGGCTTCGTCTTCTTCGATTACTGATGAGAGAGCTGTTGAAGCGCAGAAGAAACAGAGAACAGCTGCTTGGGCTGTTTCGCCGAATCACGGAATCGTTTTTGACGAGACGTGGAAGTTAGTTGATGATTTGGAGATTCTGGTGAAGAGATTGAAGTCGAAACAGGAGAAAGATGGAAAATTGAAAGCTGATAATAACAATAACAATGTTGATGCGTTTTCTGATGCTGGATGGTCTAGAGAGTTAGGTCCGTCTTCTGAGATCTCTGAGAAGAGAATCTATTGGGAAGAATCGAGTCATGATTATGGAGTGTTTGTGAAGGAATTAGGTGTTTTGAGAAGTAAAGCTGATGGAGCTAGGTCTAGAGAAGAAGCTTTTGATGGACATATGGCTATTGGTAGGGTTTTATATGAGCATCAGTTGTTTAAAGAAGCTCTTGTTAGCTTCAAGAGAGCTTGTGAATTGCAACCGACTGATGTGAGACCTCATTTCAAAGCTGGGAACTGTCTTTACGTTTTGGGGAAATGCAAAGAGTCGAAAGATGAGTTTTTGTTGGCGTTGGAAGCTGCTGAGTCGGGCGGGAACCAATGGGCTTATTTGCTTCCTCAGATTTATGTCAATCTCGGTATCGCGCTTGAAGGCGAAGGTATGGTTTTGAGTGCTTGTGAGTATTATAGAGAAGCTGCGATTCTATGTCCTACGCATTTTAGAGCCTTGAAGCTTCTAGGTAGTGCGTTGTTCGGTGTAGGAGAGTATAGAGCAGCGGTTAAGGCCTTAGAGGAAGCTATATACTTGAAACCGGATTACGCAGATGCTCATTGTGATTTAGCTTCGTCTTTGCATTCAATGGGTGAAGATGAGAGAGCTATCGAGGTTTTCCAGAGAGCTATAGACTTGAAACCTGGCCATGTTGATGCTCTGTATAATCTTGGTGGGCTTTACATGGATTTAGGTAGGTTTCAGAGAGCTTCGGAGATGTACACTAGGGTCTTAACGGTATGGCCTAACCATTGGCGTGCTCAGCTTAACAAGGCGGTTTCTTTGTTAGGTGCTGGAGAGACCGAAGAAGCTAAACGAGCGCTTAAGGAAGCACTCAAACTGACAAACCGGGTTGAATTGCATGATGCAATATCTCATTTGAAACATTTGCAGAAGAAAAAGGGTAAAAACAATGGAAATGGTAATGGTGGAGAAGGTCCGTTCATCGTCGTGGAACCTTCCAAGTTCAAGACTGTGGGTGAGAAGACGACTTTGAGGCCGGATTTAGCCACAGCCCTTCAAATTAGAGCCTTTCAGAGGGTTACAAGGCTTGGGAAATGCGATGTGGAGGCTGTACGAAAGGAGATGAGAGACAATGATGTTCCTGTATCGTATTCCGGTAGTGGTGGACCGACGAAATCTATTCGGAAACCTAATTTAGAGGAGATTCTACGGCGTCTGCTCAGCTCCTTGAAACCTGACACTTTTCAAGGAGCCATCAAGGCTATAAACGAGAAAATCCTCGCGCTTCTCGATGATTCAGGGTCGGGAAGAGTTGATATGGGTATGTTTTACGCTGTGATTGCTCCTTTATGCGGTGGACATTCCGACAAAAGGAAAAGAGTTGCTTTTGATGCGCTTCTTTGGAGACCTGTAAACGAAGGAAGCTCTCAGATTACAAAAACGGATGCAGTCAAATACATTAAACTGTTGAGAGCTATTTACATTCCATCACATGGAATGAGTGAAATGTTAGAAGTTCACGGAGAAGAAGAAGCTGAATCCTCAGTGACAGTGACATTTAATCAGTTTTTAGCCATGTTCGACGATCCAGATTGGGGATTTGGTATAATGTCTACGATCCTTAAACTGGAGGCAAACGATAGAAACCGTCATGGAAACCAAGTTTGCTCGGTTTGTCGGTACCCGGTAATCGGATCCCGGTTTAAGGAAGTGAAAGCCCGGTTTAGTTTGTGTAACCAGTGTTACGGTGAAGGGAAGGTTCCTCCTTCGTTTAAACAAGAGGAATACAAGTTCCGAGAATATGAGAGTGAAGCTGAAGCCATGAAAGCTAAGTGTGTATGTTTCTCGATGCAATCTCATAAAAAAGCGATTGCCACTTGA

Protein Analysis

808

Amino Acids

90.17

Weight (kDa)

6.31

Isoelectric Point (pI)

33.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_CcmH_CycH PF23914 349 - 443 8.4e-06 Cytochrome c-type biogenesis protein H TPR domain
TPR_16 PF13432 350 - 410 3.3e-08 Tetratricopeptide repeat
TPR_11 PF13414 351 - 392 8e-07 TPR repeat
TPR_11 PF13414 388 - 426 3.5e-07 TPR repeat
TPR_19 PF14559 395 - 438 8e-07 Tetratricopeptide repeat
TPR_1 PF00515 413 - 445 3e-06 Tetratricopeptide repeat
TPR_12 PF13424 414 - 475 6e-07 Tetratricopeptide repeat
TPR_16 PF13432 416 - 474 2.6e-07 Tetratricopeptide repeat
TPR_19 PF14559 424 - 477 5.9e-06 Tetratricopeptide repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0013419)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G05150 AT2G32450
fragaria_vesca FvH4_2g39050
malus_domestica MD08G1018000.v1.1 MD15G1017300.v1.1
prunus_persica Prupe.1G370600_v2.0.a1
pyrus_communis pycom08g01560 pycom15g01520
rosa_chinensis RchiOBHm_Chr6g0302151
rosa_laevigata RLG00000011191
rosa_multiflora Rmu_ssc0000160.1_g000016
rosa_roxburghii Rroxscaffold_7G00166040
rosa_rugosa Rorug06G0312600
rosa_samantha Rh6AG425100 Rh6BG477300 Rh6CG438000 Rh6DG425000
rosa_wichuraiana Rw6G036820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 2226
AccB1I GGYRCC 2 cut(s) 245, 2226
AccB7I CCANNNNNTGG 1 cut(s) 2039
AccI GTMKAC 1 cut(s) 2159
AccII CGCG 2 cut(s) 956, 1829
AciI CCGC 6 cut(s) 95, 326, 903, 1088, 1358, 1899
AclWI GGATC 5 cut(s) 188, 2126, 2158, 2235, 2248
AcoI YGGCCR 1 cut(s) 1228
AcsI RAATTY 3 cut(s) 39, 128, 185
AcuI CTGAAG 1 cut(s) 2382
AcyI GRCGYC 1 cut(s) 1759
AfaI GTAC 4 cut(s) 232, 1304, 1659, 2228
AfeI AGCGCT 1 cut(s) 1404
AflII CTTAAG 1 cut(s) 1406
AjiI CACGTC 1 cut(s) 435
AjnI CCWGG 1 cut(s) 1225
AjuI GAANNNNNNNTTGG 2 cut(s) 376, 408
AloI GAACNNNNNNTCC 2 cut(s) 2321, 2353
Alw21I GWGCWC 1 cut(s) 1345
Alw26I GTCTC 7 cut(s) 227, 296, 425, 799, 1376, 1668, 1945
AlwI GGATC 5 cut(s) 188, 2126, 2158, 2235, 2248
Aor51HI AGCGCT 1 cut(s) 1404
AoxI GGCC 4 cut(s) 1095, 1228, 1325, 1580
ApeKI GCWGC 4 cut(s) 389, 890, 1007, 1085
ApoI RAATTY 3 cut(s) 39, 128, 185
ArsI GACNNNNNNTTYG 2 cut(s) 251, 283
Asp700I GAANNNNTTC 1 cut(s) 168
Asp718I GGTACC 1 cut(s) 2226
AspA2I CCTAGG 1 cut(s) 119
AspLEI GCGC 5 cut(s) 370, 958, 1405, 1831, 1942
AspS9I GGNCC 3 cut(s) 572, 1520, 1712
AsuC2I CCSGG 4 cut(s) 1433, 2231, 2245, 2266
AsuHPI GGTGA 4 cut(s) 478, 1187, 1574, 2306
AsuII TTCGAA 1 cut(s) 172
AvaII GGWCC 3 cut(s) 572, 1520, 1712
AvrII CCTAGG 1 cut(s) 119
BalI TGGCCA 1 cut(s) 1230
BamHI GGATCC 1 cut(s) 2240
BanI GGYRCC 2 cut(s) 245, 2226
BbsI GAAGAC 3 cut(s) 327, 570, 1574
Bbv12I GWGCWC 1 cut(s) 1345
BbvI GCAGC 4 cut(s) 376, 877, 994, 1097
BccI CCATC 8 cut(s) 62, 85, 491, 549, 668, 698, 1808, 2041
BceAI ACGGC 1 cut(s) 1772
BcgI CGANNNNNNTGC 2 cut(s) 227, 261
BciT130I CCWGG 1 cut(s) 1227
BcnI CCSGG 4 cut(s) 1433, 2231, 2245, 2266
BcoDI GTCTC 7 cut(s) 227, 296, 425, 799, 1376, 1668, 1945
BfaI CTAG 7 cut(s) 9, 120, 561, 681, 687, 1049, 1308
BfmI CTRYAG 1 cut(s) 1212
BfoI RGCGCY 1 cut(s) 1406
BfrI CTTAAG 1 cut(s) 1406
BglI GCCNNNNNGGC 1 cut(s) 1805
BglII AGATCT 1 cut(s) 585
BisI GCNGC 6 cut(s) 96, 327, 390, 891, 1008, 1086
BlnI CCTAGG 1 cut(s) 119
BlpI GCTNAGC 2 cut(s) 1344, 1766
BlsI GCNGC 6 cut(s) 97, 328, 391, 892, 1009, 1087
Bme1390I CCNGG 5 cut(s) 1227, 1433, 2231, 2245, 2266
Bme18I GGWCC 3 cut(s) 572, 1520, 1712
BmgBI CACGTC 1 cut(s) 435
BmgT120I GGNCC 3 cut(s) 572, 1520, 1712
BmiI GGNNCC 7 cut(s) 247, 908, 1539, 1798, 2228, 2242, 2307
BmrFI CCNGG 5 cut(s) 1227, 1433, 2231, 2245, 2266
BmsI GCATC 9 cut(s) 526, 538, 748, 1126, 1228, 1438, 1927, 1981, 2385
BpiI GAAGAC 3 cut(s) 327, 570, 1574
BpmI CTGGAG 2 cut(s) 1398, 2195
Bpu1102I GCTNAGC 2 cut(s) 1344, 1766
Bpu14I TTCGAA 1 cut(s) 172
BpuEI CTTGAG 1 cut(s) 305
BpuMI CCSGG 4 cut(s) 1433, 2231, 2245, 2266
Bsa29I ATCGAT 1 cut(s) 192
BsaAI YACGTR 1 cut(s) 230
BsaHI GRCGYC 1 cut(s) 1759
BsaI GGTCTC 4 cut(s) 227, 799, 1376, 1945
BsaJI CCNNGG 1 cut(s) 119
BsaWI WCCGGW 2 cut(s) 1123, 1700
BsaXI ACNNNNNCTCC 2 cut(s) 624, 654
Bse1I ACTGG 2 cut(s) 2178, 2284
BseBI CCWGG 1 cut(s) 1227
BseCI ATCGAT 1 cut(s) 192
BseDI CCNNGG 1 cut(s) 119
BseGI GGATG 2 cut(s) 560, 1996
BseMII CTCAG 9 cut(s) 312, 573, 582, 885, 944, 1358, 1780, 1988, 2103
BseNI ACTGG 2 cut(s) 2178, 2284
BseRI GAGGAG 1 cut(s) 1760
BseXI GCAGC 4 cut(s) 376, 877, 994, 1097
BseYI CCCAGC 1 cut(s) 821
Bsh1236I CGCG 2 cut(s) 956, 1829
BshFI GGCC 4 cut(s) 1097, 1230, 1327, 1582
BshNI GGYRCC 2 cut(s) 245, 2226
BshVI ATCGAT 1 cut(s) 192
BsiHKAI GWGCWC 1 cut(s) 1345
BsiSI CCGG 8 cut(s) 249, 1124, 1432, 1583, 1701, 2231, 2245, 2266
BsmAI GTCTC 7 cut(s) 227, 296, 425, 799, 1376, 1668, 1945
BsmBI CGTCTC 2 cut(s) 296, 425
BsmI GAATGC 1 cut(s) 1165
BsnI GGCC 4 cut(s) 1097, 1230, 1327, 1582
Bso31I GGTCTC 4 cut(s) 227, 799, 1376, 1945
Bsp119I TTCGAA 1 cut(s) 172
Bsp1286I GDGCHC 1 cut(s) 1345
Bsp1407I TGTACA 1 cut(s) 1302
Bsp143I GATC 7 cut(s) 20, 144, 193, 585, 2131, 2163, 2240
Bsp1720I GCTNAGC 2 cut(s) 1344, 1766
BspACI CCGC 6 cut(s) 95, 326, 903, 1088, 1358, 1899
BspANI GGCC 4 cut(s) 1097, 1230, 1327, 1582
BspCNI CTCAG 9 cut(s) 313, 574, 583, 886, 943, 1357, 1779, 1987, 2102
BspDI ATCGAT 1 cut(s) 192
BspFNI CGCG 2 cut(s) 956, 1829
BspHI TCATGA 2 cut(s) 64, 622
BspLI GGNNCC 7 cut(s) 247, 908, 1539, 1798, 2228, 2242, 2307
BspPI GGATC 5 cut(s) 188, 2126, 2158, 2235, 2248
BspT104I TTCGAA 1 cut(s) 172
BspT107I GGYRCC 2 cut(s) 245, 2226
BspTI CTTAAG 1 cut(s) 1406
BspTNI GGTCTC 4 cut(s) 227, 799, 1376, 1945
BsrGI TGTACA 1 cut(s) 1302
BsrI ACTGG 2 cut(s) 2178, 2284
BssECI CCNNGG 1 cut(s) 119
BssMI GATC 7 cut(s) 20, 144, 193, 585, 2131, 2163, 2240
BssNI GRCGYC 1 cut(s) 1759
BssT1I CCWWGG 1 cut(s) 119
Bst2UI CCWGG 1 cut(s) 1227
Bst6I CTCTTC 4 cut(s) 81, 464, 590, 1849
BstACI GRCGYC 1 cut(s) 1759
BstAFI CTTAAG 1 cut(s) 1406
BstAUI TGTACA 1 cut(s) 1302
BstBAI YACGTR 1 cut(s) 230
BstBI TTCGAA 1 cut(s) 172
BstC8I GCNNGC 1 cut(s) 1341
BstENI CCTNNNNNAGG 1 cut(s) 1618
BstF5I GGATG 2 cut(s) 560, 1996
BstFNI CGCG 2 cut(s) 956, 1829
BstH2I RGCGCY 1 cut(s) 1406
BstHHI GCGC 5 cut(s) 370, 958, 1405, 1831, 1942
BstKTI GATC 7 cut(s) 23, 147, 196, 588, 2134, 2166, 2243
BstMAI GTCTC 7 cut(s) 227, 296, 425, 799, 1376, 1668, 1945
BstMBI GATC 7 cut(s) 20, 144, 193, 585, 2131, 2163, 2240
BstNI CCWGG 1 cut(s) 1227
BstSCI CCNGG 5 cut(s) 1225, 1431, 2229, 2243, 2264
BstSFI CTRYAG 1 cut(s) 1212
BstSNI TACGTA 1 cut(s) 230
BstUI CGCG 2 cut(s) 956, 1829
BstV1I GCAGC 4 cut(s) 376, 877, 994, 1097
BstV2I GAAGAC 3 cut(s) 327, 570, 1574
BstX2I RGATCY 2 cut(s) 585, 2240
BstYI RGATCY 2 cut(s) 585, 2240
Bsu15I ATCGAT 1 cut(s) 192
BsuRI GGCC 4 cut(s) 1097, 1230, 1327, 1582
BsuTUI ATCGAT 1 cut(s) 192
BtgZI GCGATG 1 cut(s) 1659
BtrI CACGTC 1 cut(s) 435
BtsCI GGATG 2 cut(s) 560, 1996
BtsIMutI CAGTG 4 cut(s) 139, 2097, 2103, 2291
Cac8I GCNNGC 1 cut(s) 1341
CciI TCATGA 2 cut(s) 64, 622
CfoI GCGC 5 cut(s) 370, 958, 1405, 1831, 1942
Cfr13I GGNCC 3 cut(s) 572, 1520, 1712
ClaI ATCGAT 1 cut(s) 192
CseI GACGC 2 cut(s) 281, 1748
Csp6I GTAC 4 cut(s) 231, 1303, 1658, 2227
CviAII CATG 9 cut(s) 65, 623, 1232, 1267, 1445, 2039, 2122, 2198, 2368
CviQI GTAC 4 cut(s) 231, 1303, 1658, 2227
DpnI GATC 7 cut(s) 22, 146, 195, 587, 2133, 2165, 2242
DpnII GATC 7 cut(s) 20, 144, 193, 585, 2131, 2163, 2240
DraI TTTAAA 2 cut(s) 751, 2320
EaeI YGGCCR 1 cut(s) 1228
Eam1104I CTCTTC 4 cut(s) 81, 464, 590, 1849
EarI CTCTTC 4 cut(s) 81, 464, 590, 1849
Eco105I TACGTA 1 cut(s) 230
Eco130I CCWWGG 1 cut(s) 119
Eco147I AGGCCT 1 cut(s) 1097
Eco31I GGTCTC 4 cut(s) 227, 799, 1376, 1945
Eco47I GGWCC 3 cut(s) 572, 1520, 1712
Eco47III AGCGCT 1 cut(s) 1404
Eco57I CTGAAG 1 cut(s) 2382
EcoNI CCTNNNNNAGG 1 cut(s) 1618
EcoRI GAATTC 1 cut(s) 185
EcoRII CCWGG 1 cut(s) 1225
EcoT14I CCWWGG 1 cut(s) 119
ErhI CCWWGG 1 cut(s) 119
Esp3I CGTCTC 2 cut(s) 296, 425
FaeI CATG 9 cut(s) 68, 626, 1235, 1270, 1448, 2042, 2125, 2201, 2371
FalI AAGNNNNNCTT 4 cut(s) 744, 776, 1915, 1947
FatI CATG 9 cut(s) 64, 622, 1231, 1266, 1444, 2038, 2121, 2197, 2367
FauI CCCGC 1 cut(s) 896
FauNDI CATATG 1 cut(s) 711
FblI GTMKAC 1 cut(s) 2159
Fnu4HI GCNGC 6 cut(s) 96, 327, 390, 891, 1008, 1086
FokI GGATG 2 cut(s) 567, 2003
Fsp4HI GCNGC 6 cut(s) 96, 327, 390, 891, 1008, 1086
FspBI CTAG 7 cut(s) 9, 120, 561, 681, 687, 1049, 1308
GlaI GCGC 5 cut(s) 369, 957, 1404, 1830, 1941
GluI GCNGC 6 cut(s) 96, 327, 390, 891, 1008, 1086
GsaI CCCAGC 1 cut(s) 825
GsuI CTGGAG 2 cut(s) 1398, 2195
HaeII RGCGCY 1 cut(s) 1406
HaeIII GGCC 4 cut(s) 1097, 1230, 1327, 1582
HapII CCGG 8 cut(s) 249, 1124, 1432, 1583, 1701, 2231, 2245, 2266
HgaI GACGC 2 cut(s) 281, 1748
HhaI GCGC 5 cut(s) 370, 958, 1405, 1831, 1942
Hin1I GRCGYC 1 cut(s) 1759
Hin1II CATG 9 cut(s) 68, 626, 1235, 1270, 1448, 2042, 2125, 2201, 2371
Hin6I GCGC 5 cut(s) 368, 956, 1403, 1829, 1940
HinP1I GCGC 5 cut(s) 368, 956, 1403, 1829, 1940
HincII GTYRAC 2 cut(s) 115, 259
HindII GTYRAC 2 cut(s) 115, 259
HindIII AAGCTT 2 cut(s) 696, 1043
HpaI GTTAAC 1 cut(s) 115
HpaII CCGG 8 cut(s) 249, 1124, 1432, 1583, 1701, 2231, 2245, 2266
HphI GGTGA 4 cut(s) 478, 1187, 1574, 2306
Hpy166II GTNNAC 8 cut(s) 115, 259, 1305, 1712, 1904, 1960, 2065, 2160
Hpy8I GTNNAC 8 cut(s) 115, 259, 1305, 1712, 1904, 1960, 2065, 2160
Hpy99I CGWCG 9 cut(s) 59, 221, 242, 245, 275, 310, 1535, 1720, 2132
HpyCH4IV ACGT 3 cut(s) 229, 434, 837
HpyCH4V TGCA 8 cut(s) 790, 852, 1165, 1444, 1451, 1474, 1994, 2398
HpySE526I ACGT 3 cut(s) 229, 434, 837
Hsp92I GRCGYC 1 cut(s) 1759
Hsp92II CATG 9 cut(s) 68, 626, 1235, 1270, 1448, 2042, 2125, 2201, 2371
HspAI GCGC 5 cut(s) 368, 956, 1403, 1829, 1940
KpnI GGTACC 1 cut(s) 2230
KspAI GTTAAC 1 cut(s) 115
Kzo9I GATC 7 cut(s) 20, 144, 193, 585, 2131, 2163, 2240
LmnI GCTCC 4 cut(s) 677, 1775, 1796, 1894
Lsp1109I GCAGC 4 cut(s) 376, 877, 994, 1097
LweI GCATC 9 cut(s) 526, 538, 748, 1126, 1228, 1438, 1927, 1981, 2385
MaeI CTAG 7 cut(s) 9, 120, 561, 681, 687, 1049, 1308
MaeII ACGT 3 cut(s) 229, 434, 837
MaeIII GTNAC 6 cut(s) 134, 1624, 2092, 2098, 2279, 2288
MalI GATC 7 cut(s) 22, 146, 195, 587, 2133, 2165, 2242
MboI GATC 7 cut(s) 20, 144, 193, 585, 2131, 2163, 2240
MflI RGATCY 2 cut(s) 585, 2240
MhlI GDGCHC 1 cut(s) 1345
MlsI TGGCCA 1 cut(s) 1230
MluNI TGGCCA 1 cut(s) 1230
MlyI GAGTC 3 cut(s) 628, 866, 905
MmeI TCCRAC 2 cut(s) 864, 1935
Mox20I TGGCCA 1 cut(s) 1230
MroXI GAANNNNTTC 1 cut(s) 168
MscI TGGCCA 1 cut(s) 1230
MslI CAYNNNNRTG 5 cut(s) 69, 627, 1236, 1338, 1532
Msp20I TGGCCA 1 cut(s) 1230
MspA1I CMGCKG 2 cut(s) 389, 1088
MspCI CTTAAG 1 cut(s) 1406
MspI CCGG 8 cut(s) 249, 1124, 1432, 1583, 1701, 2231, 2245, 2266
MspR9I CCNGG 5 cut(s) 1227, 1433, 2231, 2245, 2266
MssI GTTTAAAC 1 cut(s) 2320
Mva1269I GAATGC 1 cut(s) 1165
MvaI CCWGG 1 cut(s) 1227
MvnI CGCG 2 cut(s) 956, 1829
NciI CCSGG 4 cut(s) 1433, 2231, 2245, 2266
NdeI CATATG 1 cut(s) 711
NdeII GATC 7 cut(s) 20, 144, 193, 585, 2131, 2163, 2240
NlaIII CATG 9 cut(s) 68, 626, 1235, 1270, 1448, 2042, 2125, 2201, 2371
NlaIV GGNNCC 7 cut(s) 247, 908, 1539, 1798, 2228, 2242, 2307
NmuCI GTSAC 3 cut(s) 134, 2092, 2098
NspV TTCGAA 1 cut(s) 172
PagI TCATGA 2 cut(s) 64, 622
PceI AGGCCT 1 cut(s) 1097
PcsI WCGNNNNNNNCGW 4 cut(s) 156, 338, 426, 1833
PctI GAATGC 1 cut(s) 1165
PdmI GAANNNNTTC 1 cut(s) 168
PflMI CCANNNNNTGG 1 cut(s) 2039
PkrI GCNGC 6 cut(s) 97, 328, 391, 892, 1009, 1087
PleI GAGTC 3 cut(s) 627, 865, 904
PmeI GTTTAAAC 1 cut(s) 2320
PpsI GAGTC 3 cut(s) 627, 865, 904
Ppu21I YACGTR 1 cut(s) 230
Psp6I CCWGG 1 cut(s) 1225
PspFI CCCAGC 1 cut(s) 821
PspGI CCWGG 1 cut(s) 1225
PspN4I GGNNCC 7 cut(s) 247, 908, 1539, 1798, 2228, 2242, 2307
PspPI GGNCC 3 cut(s) 572, 1520, 1712
PsrI GAACNNNNNNTAC 2 cut(s) 818, 850
PsuI RGATCY 2 cut(s) 585, 2240
PvuII CAGCTG 1 cut(s) 389
RsaI GTAC 4 cut(s) 232, 1304, 1659, 2228
RsaNI GTAC 4 cut(s) 231, 1303, 1658, 2227
RseI CAYNNNNRTG 5 cut(s) 69, 627, 1236, 1338, 1532
SatI GCNGC 6 cut(s) 96, 327, 390, 891, 1008, 1086
Sau3AI GATC 7 cut(s) 20, 144, 193, 585, 2131, 2163, 2240
Sau96I GGNCC 3 cut(s) 572, 1520, 1712
SchI GAGTC 3 cut(s) 628, 866, 905
ScrFI CCNGG 5 cut(s) 1227, 1433, 2231, 2245, 2266
SduI GDGCHC 1 cut(s) 1345
SfaNI GCATC 9 cut(s) 526, 538, 748, 1126, 1228, 1438, 1927, 1981, 2385
SfcI CTRYAG 1 cut(s) 1212
SfuI TTCGAA 1 cut(s) 172
SinI GGWCC 3 cut(s) 572, 1520, 1712
SmiMI CAYNNNNRTG 5 cut(s) 69, 627, 1236, 1338, 1532
SmlI CTYRAG 2 cut(s) 284, 1406
SmoI CTYRAG 2 cut(s) 284, 1406
SnaBI TACGTA 1 cut(s) 230
SseBI AGGCCT 1 cut(s) 1097
SsiI CCGC 6 cut(s) 95, 326, 903, 1088, 1358, 1899
SspMI CTAG 7 cut(s) 9, 120, 561, 681, 687, 1049, 1308
StuI AGGCCT 1 cut(s) 1097
StyD4I CCNGG 5 cut(s) 1225, 1431, 2229, 2243, 2264
StyI CCWWGG 1 cut(s) 119
TaiI ACGT 3 cut(s) 232, 437, 840
TaqII GACCGA 2 cut(s) 1400, 1729
TatI WGTACW 1 cut(s) 1302
TauI GCSGC 2 cut(s) 98, 329
TscAI CASTG 4 cut(s) 139, 2097, 2103, 2291
TseFI GTSAC 3 cut(s) 134, 2092, 2098
TseI GCWGC 4 cut(s) 389, 890, 1007, 1085
Tsp45I GTSAC 3 cut(s) 134, 2092, 2098
TspDTI ATGAA 4 cut(s) 177, 178, 1516, 2384
TspGWI ACGGA 5 cut(s) 429, 564, 1512, 2003, 2082
TspRI CASTG 4 cut(s) 139, 2097, 2103, 2291
Van91I CCANNNNNTGG 1 cut(s) 2039
Vha464I CTTAAG 1 cut(s) 1406
VpaK11BI GGWCC 3 cut(s) 572, 1520, 1712
XagI CCTNNNNNAGG 1 cut(s) 1618
XapI RAATTY 3 cut(s) 39, 128, 185
XbaI TCTAGA 2 cut(s) 560, 686
XmaJI CCTAGG 1 cut(s) 119
XmiI GTMKAC 1 cut(s) 2159
XmnI GAANNNNTTC 1 cut(s) 168
XspI CTAG 7 cut(s) 9, 120, 561, 681, 687, 1049, 1308
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.