Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0013419

Physical Location & Seq

Genomic Coordinates Forward (+)

68370941 .. 68373349

Gene Structure 2409 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG477300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2409 bp

ATGGCGACGAGAGGGAGCAGATCAGAGAAGGTCAAGAGGATTTTCTACCAATTTGACGCCAACCATGACGGAGGGCTTAACCGGGAGGAAATGGCGGCGCTCGTGGTGGCCGTAAACCCTAGGGTCAAGTTCAGCGACGAGCAGATCAATGCCATTTTGGACGAGGTGTTTCGGACCTACGGCGACTTCATCGACGGCGACAAGGGGCTGACGTATGAGGGCCTGTTGCGGACGTATGACGACGGAGCCGGCGACGTGGACCGTGACTTCGACGCGCTTGGGTTGGAGCTGAGTCTGGATGAGGCCAAAGGAGGGGCTTCCATGGCCTCCGAGGCGTCGTCGTCGTCGATAGTGGACGAGCGCATCGCGGAGTCGCAGAAGAAGCAGCGGACGGCGGCCTGGGCGGTGTCGCCGAACCACGGGATCGTGTTCGACGACACGTGGAAGATTGTGGACGATTTGGAGATTCTGGTCAAGAGGTTGAAGGTGAAGCAGGCCGGGAATAATAATGGCAAGGTCAAGGGTGAGAATCTGGACTCGTATTCGGAGGCTGGTTGGTCTAGAGAATTGGGGCCTTCTTCGGAGATTTCGGAGAAGAGGGTGTTTTGGGAAGAGTCTGGGCATGACTATGCTCTGTTTGTCAAGGAATTGGGGGTGCTCAGGAGCCGTGCCGACGGAGCAAGGTCGAGGGAGCAAGCTTTCGATGGACACATGGCAATTGGGAGGGTTTTGTATGAGCACCAGCTGTTTAAGGAAGCTTTGGTCAGTTTCAAGCGAGCCTGCGAGTTGCAACCGGTGGATGTTAGGCCACATTTCAGGGCTGGGAATTGCTTGTATGTTCTTGCCAGGTACAAAGAGTCTAAAGAGGAGTTTCTGCTGGCTCTCGAGGCCGCCGAGGCCGGTGGGAATCAGTGGGCGTATTTGCTTCCACAGATTTATGTGAATCTTGGGATTGCTCTTGAAGGTGAAGGTATGGTTTTAAGTGCTTGTGAGTATTATAGGGAAGCTGCTATACTTTGTCCAACTCATTTTAGAGCCTTGAAACTTTTGGGGAGTGCCTTGTTTGGGGTTGGGGAATATAGGGCCGCTGTTAAGGCCTTGGAAGAGGCCATTTTCATGAAACCAGACTATGCCGATGCACATTGTGATTTGGCTTCGGCTCTGCATGCTTTGGGTGAGGATGAGAGGGCAATCGAGGTTTTTCAGAAAGCCATTGATTTGAAACCCGGCCATGTTGATGCCTTGTACAATTTGGGTGGCCTTTATATGGACTTGGGAAGGTTCCAGAGAGCTTCTGAGATGTATACTAGGGTTTTAGCTGTGTGGCCAAACCACTGGCGTGCTCAGCTTAACAGGGCTGTGTCCTTGTTGGGAGCTAGGGAAACTGAGGATGCTAAGAAAGCTTTGAAGGAAGCATTGAAAATGACCAACAGGGTTGAATTGCATGATGCCATTGCACATTTGAAGCAGCTGCAGAAGAAGAAGGTGAAGGCAAATGGGGGTGCCAATGGGGAAGGTTCCTTTGTCACTGTGGACGCTACAAAATTTAAGGCCGTTGGGGAGAAAACAACTTTGAGGCAAGACTTAGCCATTGCACTTGAGATTAGGGCTTTTCAGAGGATTACCAGGTTGAGTCGTTGTGATGTGGATCTCCTTAAAAGGGAGATGAGTGATGGTGATGTACCAGTGTCGTATTCAGGTACTGGTGTCCCGCAGAGGTCCATACGCAAGCCTAACTTGGAAGAAATTCTCCGCAGGTTGCTTAATTTCCTAAAGCCTGAGACTTTTCAAGGAGCTGTGAAAGCCATAAACGAGAGAATACTCTCTGTTTTTGATGATACAGGTGCAGGTAGGGTGGACTTGGGCATGTTTTTTGCTGTTCTAGCCCCTATTTGCAGTGGCCCGCCAGAAAAGCGCAAGCGAATTGCTTTTGATGCGCTCTTGTGGCGCCCTGTGAATGAAGGTGGTGGTTCTCAGATAAGAAAAGATGACGCCACTAAATATATCAAACTGTTGAGAGCTATATATGTCCCTTCCCATGGGGTTAGTGAGATGCTGGAACTCCATGGAGAAACAGATCCTTCAACAATGTCTTACACAGAGTTTCTTGTCATGTTTAACGACCCTGATTGGGGTTTTGGTATCATGTCCACGCTGTTGAAGCTTGAAACTGGGGACAGGAATCGCCATGGTAATCATGTCTGTTCAGTTTGCCGCTATCCAATTATTGGGTCTCGCTTTAAGGAGATAAAATCTCATTTCAGTTTGTGCAATCAATGCTACAGCGAGGGAAAAGTTCCTCCTGCCTATAAGCAGGAAGAGTACAAGTTCAGAGAATATGGAACTGAGGGCGAAGCCATGAAAGACAAGTGCAAGTGCTTTACATTGCAAGCCCATAATGACCCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005886 GO:0005911 GO:0009506 GO:0012505 GO:0016020 GO:0030054 GO:0031410 GO:0031982 GO:0031984 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0055044 GO:0071944 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EF-hand_5 TPR_1 TPR_11 TPR_16 TPR_2 TPR_8

Protein Analysis

802

Amino Acids

89.71

Weight (kDa)

6.24

Isoelectric Point (pI)

33.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_CcmH_CycH	PF23914	349 - 443	7.8e-06	Cytochrome c-type biogenesis protein H TPR domain
TPR_16	PF13432	350 - 410	2.1e-11	Tetratricopeptide repeat
TPR_11	PF13414	351 - 392	1.7e-06	TPR repeat
TPR_11	PF13414	387 - 426	5.2e-08	TPR repeat
TPR_19	PF14559	396 - 439	4.6e-07	Tetratricopeptide repeat
TPR_1	PF00515	413 - 445	3.2e-06	Tetratricopeptide repeat
TPR_12	PF13424	414 - 476	4.4e-06	Tetratricopeptide repeat
TPR_16	PF13432	416 - 474	1.1e-07	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013419)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05150 AT2G32450
fragaria_vesca	FvH4_2g39050
malus_domestica	MD08G1018000.v1.1 MD15G1017300.v1.1
prunus_persica	Prupe.1G370600_v2.0.a1
pyrus_communis	pycom08g01560 pycom15g01520
rosa_chinensis	RchiOBHm_Chr6g0302151
rosa_laevigata	RLG00000011191
rosa_multiflora	Rmu_ssc0000160.1_g000016
rosa_roxburghii	Rroxscaffold_7G00166040
rosa_rugosa	Rorug06G0312600
rosa_samantha	Rh6AG425100 Rh6BG477300 Rh6CG438000 Rh6DG425000
rosa_wichuraiana	Rw6G036820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1746, 1838
AccB1I	GGYRCC	2 cut(s)	1502, 1947
AccB7I	CCANNNNNTGG	1 cut(s)	2228
AccI	GTMKAC	1 cut(s)	1304
AccII	CGCG	2 cut(s)	275, 368
AclWI	GGATC	3 cut(s)	431, 1656, 2072
AcoI	YGGCCR	3 cut(s)	108, 1228, 1325
AcsI	RAATTY	2 cut(s)	1544, 1746
AcvI	CACGTG	1 cut(s)	441
AcyI	GRCGYC	4 cut(s)	57, 335, 1948, 1992
AdeI	CACNNNGTG	1 cut(s)	1145
AfaI	GTAC	5 cut(s)	851, 1247, 1683, 1702, 2324
AfiI	CCNNNNNNNGG	9 cut(s)	312, 419, 1065, 1267, 1660, 2039, 2131, 2132, 2228
AflIII	ACRYGT	1 cut(s)	438
AgeI	ACCGGT	1 cut(s)	793
AjiI	CACGTC	1 cut(s)	256
AjnI	CCWGG	3 cut(s)	398, 845, 1625
AleI	CACNNNNGTG	1 cut(s)	1338
Alw21I	GWGCWC	3 cut(s)	660, 741, 1345
Alw26I	GTCTC	2 cut(s)	1775, 2238
AlwI	GGATC	3 cut(s)	431, 1656, 2072
AlwNI	CAGNNNCTG	1 cut(s)	1703
Ama87I	CYCGRG	1 cut(s)	884
ApeKI	GCWGC	4 cut(s)	385, 1007, 1468, 1471
ApoI	RAATTY	2 cut(s)	1544, 1746
ArsI	GACNNNNNNTTYG	2 cut(s)	251, 283
AsiGI	ACCGGT	1 cut(s)	793
Asp700I	GAANNNNTTC	1 cut(s)	1746
AspA2I	CCTAGG	1 cut(s)	119
AspLEI	GCGC	6 cut(s)	100, 277, 363, 1917, 1939, 1950
AspS9I	GGNCC	7 cut(s)	174, 220, 259, 572, 1083, 1719, 1901
AsuC2I	CCSGG	3 cut(s)	83, 499, 1227
AsuHPI	GGTGA	6 cut(s)	499, 536, 977, 1187, 1498, 1688
AvaI	CYCGRG	1 cut(s)	884
AvaII	GGWCC	3 cut(s)	174, 259, 1719
AvrII	CCTAGG	1 cut(s)	119
BaeI	ACNNNNGTAYC	2 cut(s)	1692, 1725
BalI	TGGCCA	1 cut(s)	1327
BanI	GGYRCC	2 cut(s)	1502, 1947
BarI	GAAGNNNNNNTAC	2 cut(s)	996, 1028
BauI	CACGAG	1 cut(s)	101
BbrPI	CACGTG	1 cut(s)	441
Bbv12I	GWGCWC	3 cut(s)	660, 741, 1345
BbvI	GCAGC	4 cut(s)	397, 994, 1458, 1480
BccI	CCATC	2 cut(s)	698, 1667
BceAI	ACGGC	6 cut(s)	95, 196, 211, 408, 651, 1538
BciT130I	CCWGG	3 cut(s)	400, 847, 1627
BcnI	CCSGG	3 cut(s)	83, 499, 1227
BcoDI	GTCTC	2 cut(s)	1775, 2238
BfaI	CTAG	5 cut(s)	120, 561, 1308, 1377, 1883
BfmI	CTRYAG	2 cut(s)	1472, 2281
BfoI	RGCGCY	2 cut(s)	101, 1951
BfuAI	ACCTGC	2 cut(s)	1746, 1838
BglI	GCCNNNNNGGC	2 cut(s)	332, 896
BisI	GCNGC	9 cut(s)	96, 386, 396, 891, 1008, 1086, 1469, 1472, 2215
BlnI	CCTAGG	1 cut(s)	119
BlpI	GCTNAGC	1 cut(s)	1344
BlsI	GCNGC	9 cut(s)	97, 387, 397, 892, 1009, 1087, 1470, 1473, 2216
Bme1390I	CCNGG	6 cut(s)	83, 400, 499, 847, 1227, 1627
Bme18I	GGWCC	3 cut(s)	174, 259, 1719
BmeT110I	CYCGRG	1 cut(s)	884
BmgBI	CACGTC	1 cut(s)	256
BmgT120I	GGNCC	7 cut(s)	174, 220, 259, 572, 1083, 1719, 1901
BmiI	GGNNCC	7 cut(s)	247, 573, 665, 1283, 1504, 1519, 1949
BmrFI	CCNGG	6 cut(s)	83, 400, 499, 847, 1227, 1627
BmrI	ACTGGG	1 cut(s)	2181
BmsI	GCATC	7 cut(s)	372, 1126, 1228, 1381, 1438, 1924, 2043
BmuI	ACTGGG	1 cut(s)	2181
Bpu10I	CCTNAGC	1 cut(s)	659
Bpu1102I	GCTNAGC	1 cut(s)	1344
BpuEI	CTTGAG	1 cut(s)	1619
BpuMI	CCSGG	3 cut(s)	83, 499, 1227
BsaAI	YACGTR	1 cut(s)	441
BsaBI	GATNNNNATC	1 cut(s)	1647
BsaHI	GRCGYC	4 cut(s)	57, 335, 1948, 1992
BsaI	GGTCTC	1 cut(s)	2238
BsaWI	WCCGGW	1 cut(s)	793
Bsc4I	CCNNNNNNNGG	9 cut(s)	312, 419, 1065, 1267, 1660, 2039, 2131, 2132, 2228
Bse118I	RCCGGY	3 cut(s)	248, 793, 899
Bse1I	ACTGG	4 cut(s)	1340, 1685, 1708, 2176
Bse3DI	GCAATG	3 cut(s)	1452, 1590, 2384
Bse8I	GATNNNNATC	1 cut(s)	1647
BseBI	CCWGG	3 cut(s)	400, 847, 1627
BseGI	GGATG	4 cut(s)	304, 805, 1186, 1396
BseJI	GATNNNNATC	1 cut(s)	1647
BseLI	CCNNNNNNNGG	9 cut(s)	312, 419, 1065, 1267, 1660, 2039, 2131, 2132, 2228
BseMI	GCAATG	3 cut(s)	1452, 1590, 2384
BseMII	CTCAG	8 cut(s)	281, 673, 1287, 1358, 1377, 1770, 1988, 2337
BseNI	ACTGG	4 cut(s)	1340, 1685, 1708, 2176
BseRI	GAGGAG	1 cut(s)	881
BseXI	GCAGC	4 cut(s)	397, 994, 1458, 1480
BseYI	CCCAGC	1 cut(s)	821
BsgI	GTGCAG	1 cut(s)	1866
Bsh1236I	CGCG	2 cut(s)	275, 368
BshNI	GGYRCC	2 cut(s)	1502, 1947
BshTI	ACCGGT	1 cut(s)	793
BsiHKAI	GWGCWC	3 cut(s)	660, 741, 1345
BsiHKCI	CYCGRG	1 cut(s)	884
BsiSI	CCGG	6 cut(s)	82, 249, 498, 794, 900, 1227
BslFI	GGGAC	3 cut(s)	1694, 2015, 2189
BslI	CCNNNNNNNGG	9 cut(s)	312, 419, 1065, 1267, 1660, 2039, 2131, 2132, 2228
BsmAI	GTCTC	2 cut(s)	1775, 2238
BsmFI	GGGAC	3 cut(s)	1694, 2015, 2189
Bso31I	GGTCTC	1 cut(s)	2238
BsoBI	CYCGRG	1 cut(s)	884
Bsp1286I	GDGCHC	3 cut(s)	660, 741, 1345
Bsp1407I	TGTACA	1 cut(s)	1245
Bsp143I	GATC	5 cut(s)	20, 144, 423, 1648, 2077
Bsp1720I	GCTNAGC	1 cut(s)	1344
Bsp19I	CCATGG	4 cut(s)	321, 2038, 2065, 2188
BspCNI	CTCAG	8 cut(s)	282, 672, 1288, 1357, 1378, 1771, 1987, 2338
BspFNI	CGCG	2 cut(s)	275, 368
BspHI	TCATGA	1 cut(s)	1116
BspLI	GGNNCC	7 cut(s)	247, 573, 665, 1283, 1504, 1519, 1949
BspMAI	CTGCAG	1 cut(s)	1476
BspMI	ACCTGC	2 cut(s)	1746, 1838
BspPI	GGATC	3 cut(s)	431, 1656, 2072
BspT107I	GGYRCC	2 cut(s)	1502, 1947
BspTNI	GGTCTC	1 cut(s)	2238
BsrDI	GCAATG	3 cut(s)	1452, 1590, 2384
BsrFI	RCCGGY	3 cut(s)	248, 793, 899
BsrGI	TGTACA	1 cut(s)	1245
BsrI	ACTGG	4 cut(s)	1340, 1685, 1708, 2176
BssAI	RCCGGY	3 cut(s)	248, 793, 899
BssMI	GATC	5 cut(s)	20, 144, 423, 1648, 2077
BssNAI	GTATAC	1 cut(s)	1305
BssNI	GRCGYC	4 cut(s)	57, 335, 1948, 1992
BssSI	CACGAG	1 cut(s)	101
BssT1I	CCWWGG	6 cut(s)	119, 321, 1098, 2038, 2065, 2188
Bst1107I	GTATAC	1 cut(s)	1305
Bst2BI	CACGAG	1 cut(s)	101
Bst2UI	CCWGG	3 cut(s)	400, 847, 1627
Bst4CI	ACNGT	3 cut(s)	263, 1531, 2013
Bst6I	CTCTTC	4 cut(s)	590, 606, 1098, 2313
BstACI	GRCGYC	4 cut(s)	57, 335, 1948, 1992
BstAPI	GCANNNNNTGC	1 cut(s)	2277
BstAUI	TGTACA	1 cut(s)	1245
BstBAI	YACGTR	1 cut(s)	441
BstDSI	CCRYGG	5 cut(s)	321, 418, 2038, 2065, 2188
BstF5I	GGATG	4 cut(s)	304, 805, 1186, 1396
BstFNI	CGCG	2 cut(s)	275, 368
BstH2I	RGCGCY	2 cut(s)	101, 1951
BstHHI	GCGC	6 cut(s)	100, 277, 363, 1917, 1939, 1950
BstKTI	GATC	5 cut(s)	23, 147, 426, 1651, 2080
BstMAI	GTCTC	2 cut(s)	1775, 2238
BstMBI	GATC	5 cut(s)	20, 144, 423, 1648, 2077
BstNI	CCWGG	3 cut(s)	400, 847, 1627
BstNSI	RCATGY	2 cut(s)	1169, 1870
BstSCI	CCNGG	6 cut(s)	81, 398, 497, 845, 1225, 1625
BstSFI	CTRYAG	2 cut(s)	1472, 2281
BstUI	CGCG	2 cut(s)	275, 368
BstV1I	GCAGC	4 cut(s)	397, 994, 1458, 1480
BstX2I	RGATCY	2 cut(s)	1648, 2077
BstXI	CCANNNNNNTGG	1 cut(s)	1335
BstYI	RGATCY	2 cut(s)	1648, 2077
BstZ17I	GTATAC	1 cut(s)	1305
BtgI	CCRYGG	5 cut(s)	321, 418, 2038, 2065, 2188
BtgZI	GCGATG	1 cut(s)	349
BtrI	CACGTC	1 cut(s)	256
BtsCI	GGATG	4 cut(s)	304, 805, 1186, 1396
BtsI	GCAGTG	1 cut(s)	1903
BtsIMutI	CAGTG	5 cut(s)	917, 1333, 1527, 1692, 1903
BveI	ACCTGC	2 cut(s)	1746, 1838
CaiI	CAGNNNCTG	1 cut(s)	1703
CciI	TCATGA	1 cut(s)	1116
CfoI	GCGC	6 cut(s)	100, 277, 363, 1917, 1939, 1950
Cfr10I	RCCGGY	3 cut(s)	248, 793, 899
Cfr13I	GGNCC	7 cut(s)	174, 220, 259, 572, 1083, 1719, 1901
CseI	GACGC	5 cut(s)	65, 281, 324, 1544, 2000
CsiI	ACCWGGT	1 cut(s)	1625
Csp6I	GTAC	5 cut(s)	850, 1246, 1682, 1701, 2323
CspAI	ACCGGT	1 cut(s)	793
CspCI	CAANNNNNGTGG	2 cut(s)	1237, 1272
CviQI	GTAC	5 cut(s)	850, 1246, 1682, 1701, 2323
DinI	GGCGCC	1 cut(s)	1949
DpnI	GATC	5 cut(s)	22, 146, 425, 1650, 2079
DpnII	GATC	5 cut(s)	20, 144, 423, 1648, 2077
DraIII	CACNNNGTG	1 cut(s)	1145
EaeI	YGGCCR	3 cut(s)	108, 1228, 1325
Eam1104I	CTCTTC	4 cut(s)	590, 606, 1098, 2313
EarI	CTCTTC	4 cut(s)	590, 606, 1098, 2313
Eco130I	CCWWGG	6 cut(s)	119, 321, 1098, 2038, 2065, 2188
Eco147I	AGGCCT	1 cut(s)	1097
Eco31I	GGTCTC	1 cut(s)	2238
Eco47I	GGWCC	3 cut(s)	174, 259, 1719
Eco72I	CACGTG	1 cut(s)	441
Eco88I	CYCGRG	1 cut(s)	884
EcoO109I	RGGNCCY	2 cut(s)	220, 572
EcoRII	CCWGG	3 cut(s)	398, 845, 1625
EcoT14I	CCWWGG	6 cut(s)	119, 321, 1098, 2038, 2065, 2188
EgeI	GGCGCC	1 cut(s)	1949
EheI	GGCGCC	1 cut(s)	1949
ErhI	CCWWGG	6 cut(s)	119, 321, 1098, 2038, 2065, 2188
FalI	AAGNNNNNCTT	2 cut(s)	1721, 1753
FaqI	GGGAC	3 cut(s)	1694, 2015, 2189
FauI	CCCGC	2 cut(s)	1719, 1911
FblI	GTMKAC	1 cut(s)	1304
Fnu4HI	GCNGC	9 cut(s)	96, 386, 396, 891, 1008, 1086, 1469, 1472, 2215
FokI	GGATG	4 cut(s)	311, 812, 1193, 1403
Fsp4HI	GCNGC	9 cut(s)	96, 386, 396, 891, 1008, 1086, 1469, 1472, 2215
FspBI	CTAG	5 cut(s)	120, 561, 1308, 1377, 1883
GlaI	GCGC	6 cut(s)	99, 276, 362, 1916, 1938, 1949
GluI	GCNGC	9 cut(s)	96, 386, 396, 891, 1008, 1086, 1469, 1472, 2215
GsaI	CCCAGC	1 cut(s)	825
HaeII	RGCGCY	2 cut(s)	101, 1951
HapII	CCGG	6 cut(s)	82, 249, 498, 794, 900, 1227
HgaI	GACGC	5 cut(s)	65, 281, 324, 1544, 2000
HhaI	GCGC	6 cut(s)	100, 277, 363, 1917, 1939, 1950
Hin1I	GRCGYC	4 cut(s)	57, 335, 1948, 1992
Hin6I	GCGC	6 cut(s)	98, 275, 361, 1915, 1937, 1948
HinP1I	GCGC	6 cut(s)	98, 275, 361, 1915, 1937, 1948
HindIII	AAGCTT	4 cut(s)	696, 756, 1401, 2162
HpaII	CCGG	6 cut(s)	82, 249, 498, 794, 900, 1227
HphI	GGTGA	6 cut(s)	499, 536, 977, 1187, 1498, 1688
Hpy166II	GTNNAC	8 cut(s)	115, 259, 355, 454, 1305, 1534, 1858, 2151
Hpy8I	GTNNAC	8 cut(s)	115, 259, 355, 454, 1305, 1534, 1858, 2151
HpyCH4III	ACNGT	3 cut(s)	263, 1531, 2013
HpyCH4IV	ACGT	4 cut(s)	212, 233, 255, 440
HpySE526I	ACGT	4 cut(s)	212, 233, 255, 440
Hsp92I	GRCGYC	4 cut(s)	57, 335, 1948, 1992
HspAI	GCGC	6 cut(s)	98, 275, 361, 1915, 1937, 1948
KasI	GGCGCC	1 cut(s)	1947
KroI	GCCGGC	1 cut(s)	248
KroNI	GCCGGC	1 cut(s)	250
Kzo9I	GATC	5 cut(s)	20, 144, 423, 1648, 2077
LmnI	GCTCC	8 cut(s)	15, 245, 286, 663, 677, 691, 1373, 1793
Lsp1109I	GCAGC	4 cut(s)	397, 994, 1458, 1480
LweI	GCATC	7 cut(s)	372, 1126, 1228, 1381, 1438, 1924, 2043
MabI	ACCWGGT	1 cut(s)	1625
MaeI	CTAG	5 cut(s)	120, 561, 1308, 1377, 1883
MaeII	ACGT	4 cut(s)	212, 233, 255, 440
MaeIII	GTNAC	2 cut(s)	263, 1525
MalI	GATC	5 cut(s)	22, 146, 425, 1650, 2079
MboI	GATC	5 cut(s)	20, 144, 423, 1648, 2077
MfeI	CAATTG	1 cut(s)	717
MflI	RGATCY	2 cut(s)	1648, 2077
MhlI	GDGCHC	3 cut(s)	660, 741, 1345
MlsI	TGGCCA	1 cut(s)	1327
MluNI	TGGCCA	1 cut(s)	1327
Mly113I	GGCGCC	1 cut(s)	1948
MlyI	GAGTC	6 cut(s)	301, 380, 530, 623, 866, 1642
MmeI	TCCRAC	2 cut(s)	264, 1046
Mox20I	TGGCCA	1 cut(s)	1327
MroNI	GCCGGC	1 cut(s)	248
MroXI	GAANNNNTTC	1 cut(s)	1746
MscI	TGGCCA	1 cut(s)	1327
MslI	CAYNNNNRTG	4 cut(s)	627, 1115, 1236, 1338
Msp20I	TGGCCA	1 cut(s)	1327
MspA1I	CMGCKG	4 cut(s)	388, 745, 1088, 1471
MspI	CCGG	6 cut(s)	82, 249, 498, 794, 900, 1227
MspR9I	CCNGG	6 cut(s)	83, 400, 499, 847, 1227, 1627
MunI	CAATTG	1 cut(s)	717
MvaI	CCWGG	3 cut(s)	400, 847, 1627
MvnI	CGCG	2 cut(s)	275, 368
NaeI	GCCGGC	1 cut(s)	250
NarI	GGCGCC	1 cut(s)	1948
NciI	CCSGG	3 cut(s)	83, 499, 1227
NcoI	CCATGG	4 cut(s)	321, 2038, 2065, 2188
NdeII	GATC	5 cut(s)	20, 144, 423, 1648, 2077
NgoMIV	GCCGGC	1 cut(s)	248
NlaIV	GGNNCC	7 cut(s)	247, 573, 665, 1283, 1504, 1519, 1949
NmeAIII	GCCGAG	1 cut(s)	919
NmuCI	GTSAC	2 cut(s)	263, 1525
NspI	RCATGY	2 cut(s)	1169, 1870
OliI	CACNNNNGTG	1 cut(s)	1338
PaeI	GCATGC	1 cut(s)	1169
PaeR7I	CTCGAG	1 cut(s)	884
PagI	TCATGA	1 cut(s)	1116
PceI	AGGCCT	1 cut(s)	1097
PcsI	WCGNNNNNNNCGW	5 cut(s)	108, 249, 344, 432, 891
PdiI	GCCGGC	1 cut(s)	250
PdmI	GAANNNNTTC	1 cut(s)	1746
PfeI	GAWTC	5 cut(s)	466, 529, 907, 943, 2182
PflMI	CCANNNNNTGG	1 cut(s)	2228
PinAI	ACCGGT	1 cut(s)	793
PkrI	GCNGC	9 cut(s)	97, 387, 397, 892, 1009, 1087, 1470, 1473, 2216
PleI	GAGTC	6 cut(s)	300, 379, 530, 622, 865, 1641
PluTI	GGCGCC	1 cut(s)	1951
PmaCI	CACGTG	1 cut(s)	441
PmlI	CACGTG	1 cut(s)	441
PpsI	GAGTC	6 cut(s)	300, 379, 530, 622, 865, 1641
Ppu21I	YACGTR	1 cut(s)	441
Psp6I	CCWGG	3 cut(s)	398, 845, 1625
PspCI	CACGTG	1 cut(s)	441
PspFI	CCCAGC	1 cut(s)	821
PspGI	CCWGG	3 cut(s)	398, 845, 1625
PspN4I	GGNNCC	7 cut(s)	247, 573, 665, 1283, 1504, 1519, 1949
PspPI	GGNCC	7 cut(s)	174, 220, 259, 572, 1083, 1719, 1901
PstI	CTGCAG	1 cut(s)	1476
PstNI	CAGNNNCTG	1 cut(s)	1703
PsuI	RGATCY	2 cut(s)	1648, 2077
PvuII	CAGCTG	2 cut(s)	745, 1471
RsaI	GTAC	5 cut(s)	851, 1247, 1683, 1702, 2324
RsaNI	GTAC	5 cut(s)	850, 1246, 1682, 1701, 2323
RseI	CAYNNNNRTG	4 cut(s)	627, 1115, 1236, 1338
SatI	GCNGC	9 cut(s)	96, 386, 396, 891, 1008, 1086, 1469, 1472, 2215
Sau3AI	GATC	5 cut(s)	20, 144, 423, 1648, 2077
Sau96I	GGNCC	7 cut(s)	174, 220, 259, 572, 1083, 1719, 1901
SchI	GAGTC	6 cut(s)	301, 380, 530, 623, 866, 1642
ScrFI	CCNGG	6 cut(s)	83, 400, 499, 847, 1227, 1627
SduI	GDGCHC	3 cut(s)	660, 741, 1345
SexAI	ACCWGGT	1 cut(s)	1625
SfaNI	GCATC	7 cut(s)	372, 1126, 1228, 1381, 1438, 1924, 2043
SfcI	CTRYAG	2 cut(s)	1472, 2281
SfiI	GGCCNNNNNGGCC	1 cut(s)	896
SfoI	GGCGCC	1 cut(s)	1949
Sfr274I	CTCGAG	1 cut(s)	884
SinI	GGWCC	3 cut(s)	174, 259, 1719
SlaI	CTCGAG	1 cut(s)	884
SmiMI	CAYNNNNRTG	4 cut(s)	627, 1115, 1236, 1338
SmlI	CTYRAG	2 cut(s)	884, 1598
SmoI	CTYRAG	2 cut(s)	884, 1598
SphI	GCATGC	1 cut(s)	1169
SseBI	AGGCCT	1 cut(s)	1097
SspDI	GGCGCC	1 cut(s)	1947
SspMI	CTAG	5 cut(s)	120, 561, 1308, 1377, 1883
StuI	AGGCCT	1 cut(s)	1097
StyD4I	CCNGG	6 cut(s)	81, 398, 497, 845, 1225, 1625
StyI	CCWWGG	6 cut(s)	119, 321, 1098, 2038, 2065, 2188
TaaI	ACNGT	3 cut(s)	263, 1531, 2013
TaiI	ACGT	4 cut(s)	215, 236, 258, 443
TaqI	TCGA	8 cut(s)	192, 270, 347, 432, 686, 702, 885, 1194
TatI	WGTACW	2 cut(s)	1245, 2322
TauI	GCSGC	5 cut(s)	98, 398, 893, 1088, 2217
TfiI	GAWTC	5 cut(s)	466, 529, 907, 943, 2182
TscAI	CASTG	5 cut(s)	917, 1340, 1534, 1692, 1903
TseFI	GTSAC	2 cut(s)	263, 1525
TseI	GCWGC	4 cut(s)	385, 1007, 1468, 1471
Tsp45I	GTSAC	2 cut(s)	263, 1525
TspDTI	ATGAA	5 cut(s)	178, 1105, 1133, 1974, 2375
TspGWI	ACGGA	3 cut(s)	84, 258, 690
TspRI	CASTG	5 cut(s)	917, 1340, 1534, 1692, 1903
Van91I	CCANNNNNTGG	1 cut(s)	2228
VpaK11BI	GGWCC	3 cut(s)	174, 259, 1719
XapI	RAATTY	2 cut(s)	1544, 1746
XbaI	TCTAGA	1 cut(s)	560
XceI	RCATGY	2 cut(s)	1169, 1870
XhoI	CTCGAG	1 cut(s)	884
XmaJI	CCTAGG	1 cut(s)	119
XmiI	GTMKAC	1 cut(s)	1304
XmnI	GAANNNNTTC	1 cut(s)	1746
XspI	CTAG	5 cut(s)	120, 561, 1308, 1377, 1883

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.