Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0013419

Physical Location & Seq

Genomic Coordinates Forward (+)

1185997 .. 1188496

Gene Structure 2500 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g01560.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2448 bp

ATGCGTACCCCCGCCGCACCGTATATTTTTGGTCCCCCTCGGTCACTCTCCCATTTATCCGGAGTTTTAATGACGACGAGAGGGAGCAGATCGGAGAAGGTGAAACGGATTTTCTACCAGTTCGATGACAACCACGACGGCGGCCTCAACCGCGATGAGATGGCGGCGCTCGTCGTCGCCGTAAACCCTAGGGTCAAATTTTCCAACGAGCAGATCAATGCCATTTTGGACGAGGTTTTCCGGACCTACGGCGACTTCATCGACGGCGAGAAGGGGCTGACGTACGAGGGGCTTTTGCGGACGTACGATGACGGAGCCGGCGATGTGGACCGTGATTTCGACGCGCTCGGGTTGGAGCTTACGCTGGACGAGACGAAGGCGTCCGAGGCGTCGTCATCGTCGATTGTCGACGAGCGGGTGGTGGAGTCGCAGAAGAAGCAGAGGACGGCGGCGTGGGCGGTGTCGCCGAACCACGGGATCGTGTTCGACGACACGTGGAAGATTGTGGACGATTTGGAGATTCTGGTGAAGCGGTTGAAGGCGAAGCAGAGCAAAGACGGGAAATTGAAGGCGGACAACATCGACGCCTTCTCCGACGCCGGTTGGTCGAGGGAATTGGGGCCGTCGTCGGAGATTTCTGAGAAAAGGGTATTTTGGGAGGAGAATGGGCATGATTACGCTCTGTTCGTCAAAGAATTGGGGGTGCTGAGGAGCCGGGCTGACGGAGCGAGGTCACGTGAGCAGGCCTTCGACGGGCACATGGCGATTGGGAGGGTGCTGTACGAGCACCAGCTGTTTAAGGAGGCATTGGTGAGCTTCAAGAGGTCCTGTGAGTTGCAGCCGGTGGACGTGCGGCCGCATTTCCGAGCTGGGAATTGCTTGTATGTTCTTGGCAGGTATAAGGAAGCCAAAGAAGAGTTTTTGCTGGCGTTGGAGGCGGCGGAGGCCGGCGGCAACCAGTGGGCTTATCTGCTTCCACAGATTTATGTGAATCTCGGGATTGCGCTTGAAGGTGAAGGTATGGTTATGAGTGCTTGTGAGTATTACAGAGAAGCTGCAATTCTATGTCCAACACATTTTAGAGCTTTGAAACTTTTGGGTAGTGCTCTTTTCGGGGTTGGGGAATATGAGGCGGCTGTCAAGGCCTTGGATGAGGCCATTTTTATGAAACCCGATTATGCCGATGCGCATTGTGATTTGGCTTCGGCTTTGCATGCCATGGGGGAGGATGAGAGGGCAATTGCCACATTTCAGAAAGCTATTGATTTGAAGCCTGGTCATGTGGATGCTTTGTATAATTTGGGTGGGCTGTATATGGATTCGGGTAGGTTTCCGAGAGCTTCTGAGATGTATACTAGGGTTTTAGCTGTGTGGCCGAACCATTGGCGTGCGCAGCTTAACAAGGCCGTGTCTTTGTTGGGAGCTCGGGAAACTGAGGAGGCTAAGAAGGCTCTGAAGGAAGCATTGAAAATGACCAACAGGGTTGAATTGCATGATGCCATTGCACATTTGAAGCAGCTGCAGAAGAAGAAGGTGAAGGCAACCAATGGAGAGGGTTCTTTTGTCACTGTCGAACCCTCGAAATTCAAGACAGTTGGGGAGAAGACTACTTTGAGGCAAGAATTGGCCAATGCACTTGAGATTAGGGCCTTTCAGAGGATTACCAGGTTGAGTCGATGTGATGTGGAGCTTCTTAAGAAGGAAATGAATGATGGTGAAGTACCTCTTTCGTATTCAGGTACTGGTGTTCCTCAGAGATCCATACGCAAGCCTAATTTAGAAGTAATCCTCCGCAGGTTGCTTGATTTTCTAAAGCCAGAGACTTTCCAAGGAGCTGTTAAAGCCATAAACGAGAGGATACTCTCTGTCATGGATGAAACAGGCTCAGGAAGAGTGGATTTGGGAATGTTTTTTGCTGTTTTAGCCCCTATTTGCAGTGGCTCGCCAGAAAAGCGCAAACGAGTTGCATTTGATGCGCTCTTGTGGCGTCCTGTAAACGAGGGTGGTGGTTCCCAGATAAGAAAAGCTGATGCCACTAGCTATATCAATCTGTTGAGAGCCATGTATGTCCCTTCCCACGGGGTTAGCGAGATGCTGGAACTCCATGGAGAAATGGATCTTTCCACAGTGTCTTTCACAGAGTTTCTTGTCATGTTTGACGACCCAGATTGGGGTTTTGGTATCATGTCCACGCTGTTGAAGCTTGAAACCGGGGACAGAAACCGCCATGGTAACCATGTCTGCTCGGTCTGCCGCTACCCGATCATCGGGTCCCGATTTAAGGAGGTAAAATCTCATTTCAGCTTGTGTAATCAATGCTATAGCGAGGGAAAGGTGCCTCCTACCTCGAAGCAGGAAGAGTACAAATTCAGAGAATACGGAAGCGAGGCTGAAGCCATGAAACACAAATGCAAGTGCTTTACATTGCAATCCCACAAGGCCCCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005886 GO:0005911 GO:0009506 GO:0012505 GO:0016020 GO:0030054 GO:0031410 GO:0031982 GO:0031984 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0055044 GO:0071944 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EF-hand_5 TPR_1 TPR_11 TPR_16 TPR_2 TPR_8

Protein Analysis

816

Amino Acids

91.31

Weight (kDa)

6.44

Isoelectric Point (pI)

35.77

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013419)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05150 AT2G32450
fragaria_vesca	FvH4_2g39050
malus_domestica	MD08G1018000.v1.1 MD15G1017300.v1.1
prunus_persica	Prupe.1G370600_v2.0.a1
pyrus_communis	pycom08g01560 pycom15g01520
rosa_chinensis	RchiOBHm_Chr6g0302151
rosa_laevigata	RLG00000011191
rosa_multiflora	Rmu_ssc0000160.1_g000016
rosa_roxburghii	Rroxscaffold_7G00166040
rosa_rugosa	Rorug06G0312600
rosa_samantha	Rh6AG425100 Rh6BG477300 Rh6CG438000 Rh6DG425000
rosa_wichuraiana	Rw6G036820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	379
Acc16I	TGCGCA	2 cut(s)	1188, 1392
Acc36I	ACCTGC	2 cut(s)	885, 1785
AccB1I	GGYRCC	1 cut(s)	2335
AccBSI	CCGCTC	1 cut(s)	415
AccI	GTMKAC	2 cut(s)	408, 1352
AccII	CGCG	2 cut(s)	153, 344
AccIII	TCCGGA	2 cut(s)	59, 240
AclWI	GGATC	3 cut(s)	485, 1752, 2124
AcoI	YGGCCR	3 cut(s)	854, 1373, 1626
AcsI	RAATTY	3 cut(s)	197, 1583, 2366
AcuI	CTGAAG	2 cut(s)	1475, 2412
AcvI	CACGTG	2 cut(s)	495, 737
AcyI	GRCGYC	5 cut(s)	380, 389, 585, 597, 1987
AfaI	GTAC	7 cut(s)	7, 284, 305, 782, 1722, 1741, 2363
AfiI	CCNNNNNNNGG	8 cut(s)	473, 753, 1656, 2078, 2170, 2171, 2267, 2281
AflII	CTTAAG	1 cut(s)	1694
AflIII	ACRYGT	1 cut(s)	492
AjiI	CACGTC	1 cut(s)	850
AjnI	CCWGG	2 cut(s)	1273, 1664
Alw21I	GWGCWC	3 cut(s)	789, 1108, 1426
Alw26I	GTCTC	2 cut(s)	365, 1814
AlwI	GGATC	3 cut(s)	485, 1752, 2124
AlwNI	CAGNNNCTG	1 cut(s)	1742
Ama87I	CYCGRG	3 cut(s)	347, 995, 1425
Aor13HI	TCCGGA	2 cut(s)	59, 240
ApeKI	GCWGC	5 cut(s)	838, 1055, 1393, 1516, 1519
ApoI	RAATTY	3 cut(s)	197, 1583, 2366
ArsI	GACNNNNNNTTYG	2 cut(s)	320, 352
AspA2I	CCTAGG	1 cut(s)	188
AspLEI	GCGC	7 cut(s)	169, 346, 1006, 1189, 1393, 1956, 1978
AspS9I	GGNCC	8 cut(s)	32, 243, 328, 620, 825, 1647, 2271, 2440
AsuC2I	CCSGG	2 cut(s)	716, 2212
AsuHPI	GGTGA	6 cut(s)	112, 538, 823, 1025, 1546, 1727
AvaI	CYCGRG	3 cut(s)	347, 995, 1425
AvaII	GGWCC	5 cut(s)	32, 243, 328, 825, 2271
AvrII	CCTAGG	1 cut(s)	188
BaeGI	GKGCMC	1 cut(s)	759
BaeI	ACNNNNGTAYC	2 cut(s)	1731, 1764
BalI	TGGCCA	1 cut(s)	1628
BanI	GGYRCC	1 cut(s)	2335
BanII	GRGCYC	1 cut(s)	1426
BbrPI	CACGTG	2 cut(s)	495, 737
BbsI	GAAGAC	1 cut(s)	1610
Bbv12I	GWGCWC	3 cut(s)	789, 1108, 1426
BbvCI	CCTCAGC	1 cut(s)	707
BbvI	GCAGC	5 cut(s)	850, 1042, 1405, 1506, 1528
BccI	CCATC	2 cut(s)	154, 1706
BceAI	ACGGC	7 cut(s)	154, 164, 265, 280, 462, 607, 1391
BciT130I	CCWGG	2 cut(s)	1275, 1666
BciVI	GTATCC	1 cut(s)	1851
BcnI	CCSGG	2 cut(s)	716, 2212
BcoDI	GTCTC	2 cut(s)	365, 1814
BfaI	CTAG	3 cut(s)	189, 1356, 2037
BfmI	CTRYAG	2 cut(s)	1520, 2320
BfoI	RGCGCY	1 cut(s)	170
BfrI	CTTAAG	1 cut(s)	1694
BfuAI	ACCTGC	2 cut(s)	885, 1785
BfuI	GTATCC	1 cut(s)	1851
BlnI	CCTAGG	1 cut(s)	188
Bme1390I	CCNGG	4 cut(s)	716, 1275, 1666, 2212
Bme18I	GGWCC	5 cut(s)	32, 243, 328, 825, 2271
BmeT110I	CYCGRG	3 cut(s)	347, 995, 1425
BmgBI	CACGTC	1 cut(s)	850
BmgT120I	GGNCC	8 cut(s)	32, 243, 328, 620, 825, 1647, 2271, 2440
BmiI	GGNNCC	9 cut(s)	34, 316, 621, 713, 2011, 2272, 2273, 2337, 2442
BmrFI	CCNGG	4 cut(s)	716, 1275, 1666, 2212
BmsI	GCATC	6 cut(s)	1174, 1276, 1486, 1963, 2020, 2082
BpiI	GAAGAC	1 cut(s)	1610
Bpu10I	CCTNAGC	2 cut(s)	707, 1885
BpuEI	CTTGAG	1 cut(s)	1658
BpuMI	CCSGG	2 cut(s)	716, 2212
BsaAI	YACGTR	2 cut(s)	495, 737
BsaHI	GRCGYC	5 cut(s)	380, 389, 585, 597, 1987
BsaWI	WCCGGW	2 cut(s)	59, 240
BsaXI	ACNNNNNCTCC	2 cut(s)	575, 605
Bsc4I	CCNNNNNNNGG	8 cut(s)	473, 753, 1656, 2078, 2170, 2171, 2267, 2281
Bse118I	RCCGGY	4 cut(s)	317, 599, 841, 947
Bse1I	ACTGG	3 cut(s)	118, 958, 1747
Bse3DI	GCAATG	2 cut(s)	1500, 2423
BseAI	TCCGGA	2 cut(s)	59, 240
BseBI	CCWGG	2 cut(s)	1275, 1666
BseGI	GGATG	4 cut(s)	1156, 1234, 1291, 1879
BseLI	CCNNNNNNNGG	8 cut(s)	473, 753, 1656, 2078, 2170, 2171, 2267, 2281
BseMI	GCAATG	2 cut(s)	1500, 2423
BseMII	CTCAG	6 cut(s)	630, 698, 1335, 1425, 1766, 1899
BseNI	ACTGG	3 cut(s)	118, 958, 1747
BseRI	GAGGAG	3 cut(s)	674, 724, 1451
BseSI	GKGCMC	1 cut(s)	759
BseX3I	CGGCCG	1 cut(s)	854
BseXI	GCAGC	5 cut(s)	850, 1042, 1405, 1506, 1528
BseYI	CCCAGC	1 cut(s)	869
Bsh1236I	CGCG	2 cut(s)	153, 344
Bsh1285I	CGRYCG	1 cut(s)	857
BshNI	GGYRCC	1 cut(s)	2335
BsiEI	CGRYCG	1 cut(s)	857
BsiHKAI	GWGCWC	3 cut(s)	789, 1108, 1426
BsiHKCI	CYCGRG	3 cut(s)	347, 995, 1425
BsiSI	CCGG	8 cut(s)	60, 241, 318, 600, 715, 842, 948, 2211
BsiWI	CGTACG	2 cut(s)	282, 303
BslFI	GGGAC	4 cut(s)	18, 2054, 2228, 2257
BslI	CCNNNNNNNGG	8 cut(s)	473, 753, 1656, 2078, 2170, 2171, 2267, 2281
BsmAI	GTCTC	2 cut(s)	365, 1814
BsmBI	CGTCTC	1 cut(s)	365
BsmFI	GGGAC	4 cut(s)	18, 2054, 2228, 2257
BsoBI	CYCGRG	3 cut(s)	347, 995, 1425
Bsp1286I	GDGCHC	4 cut(s)	759, 789, 1108, 1426
Bsp13I	TCCGGA	2 cut(s)	59, 240
Bsp143I	GATC	6 cut(s)	89, 213, 477, 1757, 2116, 2262
Bsp19I	CCATGG	3 cut(s)	1218, 2104, 2227
BspCNI	CTCAG	6 cut(s)	631, 699, 1336, 1426, 1765, 1898
BspEI	TCCGGA	2 cut(s)	59, 240
BspFNI	CGCG	2 cut(s)	153, 344
BspLI	GGNNCC	9 cut(s)	34, 316, 621, 713, 2011, 2272, 2273, 2337, 2442
BspMAI	CTGCAG	1 cut(s)	1524
BspMI	ACCTGC	2 cut(s)	885, 1785
BspPI	GGATC	3 cut(s)	485, 1752, 2124
BspT107I	GGYRCC	1 cut(s)	2335
BspTI	CTTAAG	1 cut(s)	1694
BsrBI	CCGCTC	1 cut(s)	415
BsrDI	GCAATG	2 cut(s)	1500, 2423
BsrFI	RCCGGY	4 cut(s)	317, 599, 841, 947
BsrI	ACTGG	3 cut(s)	118, 958, 1747
BssAI	RCCGGY	4 cut(s)	317, 599, 841, 947
BssMI	GATC	6 cut(s)	89, 213, 477, 1757, 2116, 2262
BssNAI	GTATAC	1 cut(s)	1353
BssNI	GRCGYC	5 cut(s)	380, 389, 585, 597, 1987
BssT1I	CCWWGG	6 cut(s)	188, 1146, 1218, 1828, 2104, 2227
Bst1107I	GTATAC	1 cut(s)	1353
Bst2UI	CCWGG	2 cut(s)	1275, 1666
Bst4CI	ACNGT	5 cut(s)	21, 332, 1570, 1594, 2128
Bst6I	CTCTTC	3 cut(s)	909, 1885, 2352
BstACI	GRCGYC	5 cut(s)	380, 389, 585, 597, 1987
BstAFI	CTTAAG	1 cut(s)	1694
BstAPI	GCANNNNNTGC	1 cut(s)	1973
BstBAI	YACGTR	2 cut(s)	495, 737
BstC8I	GCNNGC	8 cut(s)	319, 744, 927, 949, 1215, 1389, 1769, 1943
BstDEI	CTNAG	7 cut(s)	639, 707, 1344, 1434, 1443, 1752, 1885
BstDSI	CCRYGG	5 cut(s)	472, 1218, 2077, 2104, 2227
BstEII	GGTNACC	1 cut(s)	2231
BstENI	CCTNNNNNAGG	1 cut(s)	1654
BstF5I	GGATG	4 cut(s)	1156, 1234, 1291, 1879
BstFNI	CGCG	2 cut(s)	153, 344
BstH2I	RGCGCY	1 cut(s)	170
BstHHI	GCGC	7 cut(s)	169, 346, 1006, 1189, 1393, 1956, 1978
BstKTI	GATC	6 cut(s)	92, 216, 480, 1760, 2119, 2265
BstMAI	GTCTC	2 cut(s)	365, 1814
BstMBI	GATC	6 cut(s)	89, 213, 477, 1757, 2116, 2262
BstMCI	CGRYCG	1 cut(s)	857
BstNI	CCWGG	2 cut(s)	1275, 1666
BstNSI	RCATGY	1 cut(s)	1217
BstPI	GGTNACC	1 cut(s)	2231
BstSCI	CCNGG	4 cut(s)	714, 1273, 1664, 2210
BstSFI	CTRYAG	2 cut(s)	1520, 2320
BstSLI	GKGCMC	1 cut(s)	759
BstUI	CGCG	2 cut(s)	153, 344
BstV1I	GCAGC	5 cut(s)	850, 1042, 1405, 1506, 1528
BstV2I	GAAGAC	1 cut(s)	1610
BstX2I	RGATCY	2 cut(s)	1757, 2116
BstYI	RGATCY	2 cut(s)	1757, 2116
BstZ17I	GTATAC	1 cut(s)	1353
BstZI	CGGCCG	1 cut(s)	854
BsuI	GTATCC	1 cut(s)	1851
BtgI	CCRYGG	5 cut(s)	472, 1218, 2077, 2104, 2227
BtgZI	GCGATG	2 cut(s)	168, 336
BtrI	CACGTC	1 cut(s)	850
BtsCI	GGATG	4 cut(s)	1156, 1234, 1291, 1879
BtsI	GCAGTG	1 cut(s)	1942
BtsIMutI	CAGTG	4 cut(s)	965, 1566, 1942, 2133
BveI	ACCTGC	2 cut(s)	885, 1785
Cac8I	GCNNGC	8 cut(s)	319, 744, 927, 949, 1215, 1389, 1769, 1943
CaiI	CAGNNNCTG	1 cut(s)	1742
CciNI	GCGGCCGC	1 cut(s)	854
CfoI	GCGC	7 cut(s)	169, 346, 1006, 1189, 1393, 1956, 1978
Cfr10I	RCCGGY	4 cut(s)	317, 599, 841, 947
Cfr13I	GGNCC	8 cut(s)	32, 243, 328, 620, 825, 1647, 2271, 2440
CseI	GACGC	6 cut(s)	350, 369, 378, 593, 605, 1976
CsiI	ACCWGGT	1 cut(s)	1664
Csp6I	GTAC	7 cut(s)	6, 283, 304, 781, 1721, 1740, 2362
CviQI	GTAC	7 cut(s)	6, 283, 304, 781, 1721, 1740, 2362
DdeI	CTNAG	7 cut(s)	639, 707, 1344, 1434, 1443, 1752, 1885
DpnI	GATC	6 cut(s)	91, 215, 479, 1759, 2118, 2264
DpnII	GATC	6 cut(s)	89, 213, 477, 1757, 2116, 2262
DrdI	GACNNNNNNGTC	1 cut(s)	379
DseDI	GACNNNNNNGTC	1 cut(s)	379
EaeI	YGGCCR	3 cut(s)	854, 1373, 1626
EagI	CGGCCG	1 cut(s)	854
Eam1104I	CTCTTC	3 cut(s)	909, 1885, 2352
EarI	CTCTTC	3 cut(s)	909, 1885, 2352
EciI	GGCGGA	2 cut(s)	587, 956
Ecl136II	GAGCTC	1 cut(s)	1424
EclXI	CGGCCG	1 cut(s)	854
Eco130I	CCWWGG	6 cut(s)	188, 1146, 1218, 1828, 2104, 2227
Eco147I	AGGCCT	2 cut(s)	746, 1145
Eco24I	GRGCYC	1 cut(s)	1426
Eco47I	GGWCC	5 cut(s)	32, 243, 328, 825, 2271
Eco52I	CGGCCG	1 cut(s)	854
Eco53kI	GAGCTC	1 cut(s)	1424
Eco57I	CTGAAG	2 cut(s)	1475, 2412
Eco72I	CACGTG	2 cut(s)	495, 737
Eco88I	CYCGRG	3 cut(s)	347, 995, 1425
Eco91I	GGTNACC	1 cut(s)	2231
EcoICRI	GAGCTC	1 cut(s)	1424
EcoNI	CCTNNNNNAGG	1 cut(s)	1654
EcoO109I	RGGNCCY	4 cut(s)	825, 1647, 2271, 2440
EcoO65I	GGTNACC	1 cut(s)	2231
EcoRII	CCWGG	2 cut(s)	1273, 1664
EcoT14I	CCWWGG	6 cut(s)	188, 1146, 1218, 1828, 2104, 2227
EcoT38I	GRGCYC	1 cut(s)	1426
ErhI	CCWWGG	6 cut(s)	188, 1146, 1218, 1828, 2104, 2227
Esp3I	CGTCTC	1 cut(s)	365
FalI	AAGNNNNNCTT	2 cut(s)	1710, 1742
FaqI	GGGAC	4 cut(s)	18, 2054, 2228, 2257
FauI	CCCGC	2 cut(s)	19, 408
FblI	GTMKAC	2 cut(s)	408, 1352
FokI	GGATG	4 cut(s)	1163, 1241, 1298, 1886
FriOI	GRGCYC	1 cut(s)	1426
FspAI	RTGCGCAY	1 cut(s)	1188
FspBI	CTAG	3 cut(s)	189, 1356, 2037
FspI	TGCGCA	2 cut(s)	1188, 1392
GlaI	GCGC	7 cut(s)	168, 345, 1005, 1188, 1392, 1955, 1977
GsaI	CCCAGC	1 cut(s)	873
HaeII	RGCGCY	1 cut(s)	170
HapII	CCGG	8 cut(s)	60, 241, 318, 600, 715, 842, 948, 2211
HgaI	GACGC	6 cut(s)	350, 369, 378, 593, 605, 1976
HhaI	GCGC	7 cut(s)	169, 346, 1006, 1189, 1393, 1956, 1978
Hin1I	GRCGYC	5 cut(s)	380, 389, 585, 597, 1987
Hin6I	GCGC	7 cut(s)	167, 344, 1004, 1187, 1391, 1954, 1976
HinP1I	GCGC	7 cut(s)	167, 344, 1004, 1187, 1391, 1954, 1976
HincII	GTYRAC	1 cut(s)	409
HindII	GTYRAC	1 cut(s)	409
HindIII	AAGCTT	1 cut(s)	2201
HinfI	GANTC	5 cut(s)	425, 520, 991, 1319, 1672
HpaII	CCGG	8 cut(s)	60, 241, 318, 600, 715, 842, 948, 2211
HphI	GGTGA	6 cut(s)	112, 538, 823, 1025, 1546, 1727
Hpy166II	GTNNAC	8 cut(s)	184, 328, 409, 508, 847, 1353, 1996, 2190
Hpy188III	TCNNGA	8 cut(s)	60, 241, 820, 997, 1427, 1588, 1887, 2274
Hpy8I	GTNNAC	8 cut(s)	184, 328, 409, 508, 847, 1353, 1996, 2190
HpyCH4III	ACNGT	5 cut(s)	21, 332, 1570, 1594, 2128
HpyCH4IV	ACGT	5 cut(s)	281, 302, 494, 736, 849
HpyF3I	CTNAG	7 cut(s)	639, 707, 1344, 1434, 1443, 1752, 1885
HpySE526I	ACGT	5 cut(s)	281, 302, 494, 736, 849
Hsp92I	GRCGYC	5 cut(s)	380, 389, 585, 597, 1987
HspAI	GCGC	7 cut(s)	167, 344, 1004, 1187, 1391, 1954, 1976
KflI	GGGWCCC	1 cut(s)	2271
Kpn2I	TCCGGA	2 cut(s)	59, 240
KroI	GCCGGC	2 cut(s)	317, 947
KroNI	GCCGGC	2 cut(s)	319, 949
Kzo9I	GATC	6 cut(s)	89, 213, 477, 1757, 2116, 2262
LmnI	GCTCC	8 cut(s)	84, 314, 355, 711, 725, 1421, 1687, 1832
Lsp1109I	GCAGC	5 cut(s)	850, 1042, 1405, 1506, 1528
LweI	GCATC	6 cut(s)	1174, 1276, 1486, 1963, 2020, 2082
MabI	ACCWGGT	1 cut(s)	1664
MaeI	CTAG	3 cut(s)	189, 1356, 2037
MaeII	ACGT	5 cut(s)	281, 302, 494, 736, 849
MaeIII	GTNAC	4 cut(s)	42, 732, 1564, 2231
MalI	GATC	6 cut(s)	91, 215, 479, 1759, 2118, 2264
MbiI	CCGCTC	1 cut(s)	415
MboI	GATC	6 cut(s)	89, 213, 477, 1757, 2116, 2262
MboII	GAAGA	8 cut(s)	445, 511, 926, 1537, 1540, 1615, 1902, 2369
MfeI	CAATTG	1 cut(s)	1239
MflI	RGATCY	2 cut(s)	1757, 2116
MhlI	GDGCHC	4 cut(s)	759, 789, 1108, 1426
MlsI	TGGCCA	1 cut(s)	1628
MluNI	TGGCCA	1 cut(s)	1628
MlyI	GAGTC	2 cut(s)	434, 1681
MmeI	TCCRAC	6 cut(s)	228, 333, 609, 618, 912, 1094
Mox20I	TGGCCA	1 cut(s)	1628
MroI	TCCGGA	2 cut(s)	59, 240
MroNI	GCCGGC	2 cut(s)	317, 947
MscI	TGGCCA	1 cut(s)	1628
MseI	TTAA	6 cut(s)	68, 798, 1398, 1695, 1839, 2280
MslI	CAYNNNNRTG	3 cut(s)	1163, 1284, 1386
Msp20I	TGGCCA	1 cut(s)	1628
MspA1I	CMGCKG	2 cut(s)	793, 1519
MspCI	CTTAAG	1 cut(s)	1694
MspI	CCGG	8 cut(s)	60, 241, 318, 600, 715, 842, 948, 2211
MspR9I	CCNGG	4 cut(s)	716, 1275, 1666, 2212
MunI	CAATTG	1 cut(s)	1239
MvaI	CCWGG	2 cut(s)	1275, 1666
MvnI	CGCG	2 cut(s)	153, 344
NaeI	GCCGGC	2 cut(s)	319, 949
NciI	CCSGG	2 cut(s)	716, 2212
NcoI	CCATGG	3 cut(s)	1218, 2104, 2227
NdeII	GATC	6 cut(s)	89, 213, 477, 1757, 2116, 2262
NgoMIV	GCCGGC	2 cut(s)	317, 947
NlaIV	GGNNCC	9 cut(s)	34, 316, 621, 713, 2011, 2272, 2273, 2337, 2442
NmuCI	GTSAC	3 cut(s)	42, 732, 1564
NotI	GCGGCCGC	1 cut(s)	854
NsbI	TGCGCA	2 cut(s)	1188, 1392
NspI	RCATGY	1 cut(s)	1217
PaeI	GCATGC	1 cut(s)	1217
PceI	AGGCCT	2 cut(s)	746, 1145
PcsI	WCGNNNNNNNCGW	7 cut(s)	177, 318, 398, 486, 591, 684, 2085
PdiI	GCCGGC	2 cut(s)	319, 949
PfeI	GAWTC	3 cut(s)	520, 991, 1319
Pfl23II	CGTACG	2 cut(s)	282, 303
PleI	GAGTC	2 cut(s)	433, 1680
PmaCI	CACGTG	2 cut(s)	495, 737
PmlI	CACGTG	2 cut(s)	495, 737
PpsI	GAGTC	2 cut(s)	433, 1680
Ppu21I	YACGTR	2 cut(s)	495, 737
PpuMI	RGGWCCY	2 cut(s)	825, 2271
Psp124BI	GAGCTC	1 cut(s)	1426
Psp5II	RGGWCCY	2 cut(s)	825, 2271
Psp6I	CCWGG	2 cut(s)	1273, 1664
PspCI	CACGTG	2 cut(s)	495, 737
PspEI	GGTNACC	1 cut(s)	2231
PspFI	CCCAGC	1 cut(s)	869
PspGI	CCWGG	2 cut(s)	1273, 1664
PspLI	CGTACG	2 cut(s)	282, 303
PspN4I	GGNNCC	9 cut(s)	34, 316, 621, 713, 2011, 2272, 2273, 2337, 2442
PspPI	GGNCC	8 cut(s)	32, 243, 328, 620, 825, 1647, 2271, 2440
PspPPI	RGGWCCY	2 cut(s)	825, 2271
PstI	CTGCAG	1 cut(s)	1524
PstNI	CAGNNNCTG	1 cut(s)	1742
PsuI	RGATCY	2 cut(s)	1757, 2116
PvuII	CAGCTG	2 cut(s)	793, 1519
RsaI	GTAC	7 cut(s)	7, 284, 305, 782, 1722, 1741, 2363
RsaNI	GTAC	7 cut(s)	6, 283, 304, 781, 1721, 1740, 2362
RseI	CAYNNNNRTG	3 cut(s)	1163, 1284, 1386
SacI	GAGCTC	1 cut(s)	1426
SalI	GTCGAC	1 cut(s)	407
SaqAI	TTAA	6 cut(s)	68, 798, 1398, 1695, 1839, 2280
Sau3AI	GATC	6 cut(s)	89, 213, 477, 1757, 2116, 2262
Sau96I	GGNCC	8 cut(s)	32, 243, 328, 620, 825, 1647, 2271, 2440
SchI	GAGTC	2 cut(s)	434, 1681
ScrFI	CCNGG	4 cut(s)	716, 1275, 1666, 2212
SduI	GDGCHC	4 cut(s)	759, 789, 1108, 1426
SexAI	ACCWGGT	1 cut(s)	1664
SfaNI	GCATC	6 cut(s)	1174, 1276, 1486, 1963, 2020, 2082
SfcI	CTRYAG	2 cut(s)	1520, 2320
SinI	GGWCC	5 cut(s)	32, 243, 328, 825, 2271
SmiMI	CAYNNNNRTG	3 cut(s)	1163, 1284, 1386
SmlI	CTYRAG	2 cut(s)	1637, 1694
SmoI	CTYRAG	2 cut(s)	1637, 1694
SphI	GCATGC	1 cut(s)	1217
SseBI	AGGCCT	2 cut(s)	746, 1145
SspMI	CTAG	3 cut(s)	189, 1356, 2037
SstI	GAGCTC	1 cut(s)	1426
StuI	AGGCCT	2 cut(s)	746, 1145
StyD4I	CCNGG	4 cut(s)	714, 1273, 1664, 2210
StyI	CCWWGG	6 cut(s)	188, 1146, 1218, 1828, 2104, 2227
TaaI	ACNGT	5 cut(s)	21, 332, 1570, 1594, 2128
TaiI	ACGT	5 cut(s)	284, 305, 497, 739, 852
TaqII	GACCGA	2 cut(s)	30, 2236
TatI	WGTACW	1 cut(s)	2361
TfiI	GAWTC	3 cut(s)	520, 991, 1319
Tru1I	TTAA	6 cut(s)	68, 798, 1398, 1695, 1839, 2280
Tru9I	TTAA	6 cut(s)	68, 798, 1398, 1695, 1839, 2280
TscAI	CASTG	4 cut(s)	965, 1573, 1942, 2133
TseFI	GTSAC	3 cut(s)	42, 732, 1564
TseI	GCWGC	5 cut(s)	838, 1055, 1393, 1516, 1519
Tsp45I	GTSAC	3 cut(s)	42, 732, 1564
TspDTI	ATGAA	5 cut(s)	247, 1181, 1721, 1890, 2414
TspGWI	ACGGA	4 cut(s)	121, 327, 738, 2394
TspRI	CASTG	4 cut(s)	965, 1573, 1942, 2133
Vha464I	CTTAAG	1 cut(s)	1694
VpaK11BI	GGWCC	5 cut(s)	32, 243, 328, 825, 2271
XagI	CCTNNNNNAGG	1 cut(s)	1654
XapI	RAATTY	3 cut(s)	197, 1583, 2366
XceI	RCATGY	1 cut(s)	1217
XmaJI	CCTAGG	1 cut(s)	188
XmiI	GTMKAC	2 cut(s)	408, 1352
XspI	CTAG	3 cut(s)	189, 1356, 2037

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.