Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0013419

Physical Location & Seq

Genomic Coordinates Forward (+)

1357789 .. 1360235

Gene Structure 2447 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1018000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2388 bp

ATGACGACGAGAGGGAGCAGATCGGAGAAGGTGAAGCGGATTTTCCACCAGTTCGATGACAACCACGACGGCGGCCTTAACCGCGACGAGATGGCGGCGCTCGTCGTCGCCGTAAACCCTAGGGTCAAATTTTCCAACGAGCAGATCAATGCCATTTTGGACGAGGTGTTCCGGACCTACGGCGACTTCATCGACGGCGAGAAGGGGCTGACGTACGAGGGGCTTTTGCGGACGTACGACGACGGAGCCGGTGATGTGGACCGTGACTTCGACGCACTCGGGTTGGAGCTTACGCTGGACGAGACGAAGGCGTCCATGGCGTCCGAGGCTTCGTCGTCGTCGATTGTCGACGAGCGGGTGGTGGAGTCGCAGAAGAAGCAGAGGACGGCGGCGTGGGCGGTGTCGCCGAACCACGGGATCGTGTTCGACGACACGTGGAAGATTGTGGACGATTTGGAGATTCTGGTGAAGCGGTTAAAGGCTAAGCAGAGCAAAGACGGGAAATTGAAGGCGGACAACATCGACGCCTTCTCCGACGCCGGTTGGTCGAGGGAATTGGGGCCGTCGTCGGAGATTTCTGAGAAAAGGGTATTTTGGGAGGAGAATGGGCATGATTACGCTCTGTTCGTCAAAGAATTGGGGGTGCTGAGGAGCCGGGCCGACGGAGCGAGGTCACGTGAGCAGGCCTTCGACGGGCACATGGCGATTGGGAGGGTGCTGTACGAGCACCAGCTGTTTAAGGAGGCGTTGGTGAGCTTCAAGAGGGCCTGTGAGTTGCAGCCGGTGGATGTGCGGCCGCATTTCCGAGCTGGGAATTGCTTGTATGTTCTTGGCAGGTATAAGGAAGCCAAAGAAGAGTTTTTGCTGGCGTTGGAGGCGGCGGAGGCAGGCGGCAACCAGTGGGCTTATCTGCTTCCACAGATTTATGTGAATCTCGGGATTGCTCTTGAAGGTGAAGGTATGGTTATGAGTGCTTGTGAGTATTACAGAGAAGCTGCAATTCTATGTCCAACACATTTTAGAGCTTTGAAACTTTTGGGTAGTGCTCTTTTCGGGGTTGGGGAATATAGGGCGGCTGTCAAGGCCTTGGATGAGGCCATTTTTATGAAACCCGATTATGCCGATGCGCATTGTGATTTGGCTTCCGCTTTGCATGCCATGGGGGAGGATGAGAGGGCAATTGCCACATACCAGAAAGCTATTGATTTGAAGCCTGGTCATGTGGATGCTTTGTATAATTTGGGTGGGCTGTATATGGATTCGGGTAGGTTTCCGAGAGCTTCTGAGATGTATACTAGGGTTTTAGCTGTGTGGCCGAACCATTGGCGTGCGCAGCTTAACAAGGCCGTGTCTTTGTTGGGAGCTCGGGAAACTGAGGAGGCTAAGAAGGCTCTGAAGGAAGCATTGAAAATGACCAACAGGGTTGAATTGCATGATGCCATTGCGCATTTGAAGCAGCTGCAGAAGAAGAAGGTGAAGGCAACCAATGGAGAGGGTTCTTTTGTCACTGTGGAACCCTCGAAATTCAAGACAGTTGGGGAGAAGACTACTTTGAGGCAAGAATTGGCCAATGCACTTGAGATTAGGGCCTTTCAGAGGATTACCAGGTTGAGTCGATGTGACGTGGAGCTTCTTAAGAAGGAAATGAATGATGGTGAAGTACCTCTTTCGTATTCAGGTACTGGTGTTCCTCAGAGATCCATACGCAAGCCTAATTTAGAAGTAATCCTCCGCAGGTTGCTTGATTTTCTAAAGCCAGAGACTTTCCAAGGAGCTGTTAAAGCCATAAACGAGAGGATACTCTCTGTCATGGATGATACAGGCTCAGGAAGAGTGGATTTGGGAATGTTTTTTGCTGTTTTAGCCCCTATTTGCAGTGGCTCGCCAGAAAAGCGCAAACGAGTTGCATTTGATGCGCTCTTGTGGCGTCCTGTAAACGAGGGTGGTGGTTCTCAGATAAGAAAAGCCGATGCCACTTACTATATCAAACTGTTGAGAGCCATATATGTCCCTTCCCACGGGGTTAGCGAGATGCTGGAACTCCATGGAGAAACGGATCTTTCCACAATGTCTTTCACAGAGTTTCTTGTCACGTTTGACGACCCAGATTGGGGTTTCGGTATCATGTCCACGCTGTTGAAGCTTGAAACCGGGGACAGAAACCGCCACGGTAACCATGTTTGCTCCGTCTGCCGCTACCCGATTATTGGGTCCCGATTTAAGGAGCTCAAAACTCATTTCAGTTTGTGTAATCAATGCTATAGCGAGGGAAAGGTGCCTCCTACCGCGAAGCAGGAAGAGTACAAATTCAGAGAATACGGAAGCGAGGCCGAAGCCATGAAACACAAATGCAAGTGCTTTACATTGCAATCCGACAAGGCCCCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005886 GO:0005911 GO:0009506 GO:0012505 GO:0016020 GO:0030054 GO:0031410 GO:0031982 GO:0031984 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0055044 GO:0071944 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EF-hand_5 TPR_1 TPR_11 TPR_16 TPR_2 TPR_8

Protein Analysis

796

Amino Acids

89.17

Weight (kDa)

6.42

Isoelectric Point (pI)

33.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_16	PF13432	346 - 406	1e-09	Tetratricopeptide repeat
TPR_11	PF13414	347 - 388	2.7e-06	TPR repeat
TPR_11	PF13414	383 - 422	2.4e-08	TPR repeat
TPR_19	PF14559	392 - 434	3.7e-06	Tetratricopeptide repeat
TPR_16	PF13432	412 - 470	1.9e-07	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013419)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05150 AT2G32450
fragaria_vesca	FvH4_2g39050
malus_domestica	MD08G1018000.v1.1 MD15G1017300.v1.1
prunus_persica	Prupe.1G370600_v2.0.a1
pyrus_communis	pycom08g01560 pycom15g01520
rosa_chinensis	RchiOBHm_Chr6g0302151
rosa_laevigata	RLG00000011191
rosa_multiflora	Rmu_ssc0000160.1_g000016
rosa_roxburghii	Rroxscaffold_7G00166040
rosa_rugosa	Rorug06G0312600
rosa_samantha	Rh6AG425100 Rh6BG477300 Rh6CG438000 Rh6DG425000
rosa_wichuraiana	Rw6G036820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	310
Acc16I	TGCGCA	3 cut(s)	1128, 1332, 1446
Acc36I	ACCTGC	2 cut(s)	825, 1725
AccB1I	GGYRCC	1 cut(s)	2275
AccBSI	CCGCTC	1 cut(s)	355
AccI	GTMKAC	2 cut(s)	348, 1292
AccII	CGCG	2 cut(s)	84, 2288
AccIII	TCCGGA	1 cut(s)	171
AclWI	GGATC	3 cut(s)	425, 1692, 2064
AcoI	YGGCCR	3 cut(s)	794, 1313, 1566
AcsI	RAATTY	3 cut(s)	128, 1523, 2306
AcuI	CTGAAG	1 cut(s)	1415
AcvI	CACGTG	2 cut(s)	435, 677
AcyI	GRCGYC	5 cut(s)	311, 320, 525, 537, 1927
AfaI	GTAC	6 cut(s)	215, 236, 722, 1662, 1681, 2303
AfiI	CCNNNNNNNGG	8 cut(s)	413, 693, 1596, 2018, 2110, 2111, 2207, 2221
AflII	CTTAAG	1 cut(s)	1634
AflIII	ACRYGT	1 cut(s)	432
AjiI	CACGTC	1 cut(s)	1624
AjnI	CCWGG	2 cut(s)	1213, 1604
AloI	GAACNNNNNNTCC	2 cut(s)	152, 184
Alw21I	GWGCWC	4 cut(s)	729, 1048, 1366, 2229
Alw26I	GTCTC	2 cut(s)	296, 1754
AlwI	GGATC	3 cut(s)	425, 1692, 2064
AlwNI	CAGNNNCTG	1 cut(s)	1682
Ama87I	CYCGRG	3 cut(s)	278, 935, 1365
Aor13HI	TCCGGA	1 cut(s)	171
ApeKI	GCWGC	5 cut(s)	778, 995, 1333, 1456, 1459
ApoI	RAATTY	3 cut(s)	128, 1523, 2306
ArsI	GACNNNNNNTTYG	2 cut(s)	251, 283
AspA2I	CCTAGG	1 cut(s)	119
AspLEI	GCGC	6 cut(s)	100, 1129, 1333, 1447, 1896, 1918
AspS9I	GGNCC	8 cut(s)	174, 259, 560, 657, 765, 1587, 2211, 2380
AsuC2I	CCSGG	2 cut(s)	656, 2152
AsuHPI	GGTGA	7 cut(s)	43, 263, 478, 763, 965, 1486, 1667
AvaI	CYCGRG	3 cut(s)	278, 935, 1365
AvaII	GGWCC	3 cut(s)	174, 259, 2211
AvrII	CCTAGG	1 cut(s)	119
BaeGI	GKGCMC	1 cut(s)	699
BaeI	ACNNNNGTAYC	2 cut(s)	1671, 1704
BalI	TGGCCA	1 cut(s)	1568
BanI	GGYRCC	1 cut(s)	2275
BanII	GRGCYC	2 cut(s)	1366, 2229
BbrPI	CACGTG	2 cut(s)	435, 677
BbsI	GAAGAC	1 cut(s)	1550
Bbv12I	GWGCWC	4 cut(s)	729, 1048, 1366, 2229
BbvCI	CCTCAGC	1 cut(s)	647
BbvI	GCAGC	5 cut(s)	790, 982, 1345, 1446, 1468
BccI	CCATC	2 cut(s)	85, 1646
BceAI	ACGGC	7 cut(s)	85, 95, 196, 211, 402, 547, 1331
BciT130I	CCWGG	2 cut(s)	1215, 1606
BciVI	GTATCC	1 cut(s)	1791
BcnI	CCSGG	2 cut(s)	656, 2152
BcoDI	GTCTC	2 cut(s)	296, 1754
BfaI	CTAG	2 cut(s)	120, 1296
BfmI	CTRYAG	2 cut(s)	1460, 2260
BfoI	RGCGCY	1 cut(s)	101
BfrI	CTTAAG	1 cut(s)	1634
BfuAI	ACCTGC	2 cut(s)	825, 1725
BfuI	GTATCC	1 cut(s)	1791
BlnI	CCTAGG	1 cut(s)	119
BlpI	GCTNAGC	1 cut(s)	483
Bme1390I	CCNGG	4 cut(s)	656, 1215, 1606, 2152
Bme18I	GGWCC	3 cut(s)	174, 259, 2211
BmeT110I	CYCGRG	3 cut(s)	278, 935, 1365
BmgBI	CACGTC	1 cut(s)	1624
BmgT120I	GGNCC	8 cut(s)	174, 259, 560, 657, 765, 1587, 2211, 2380
BmiI	GGNNCC	8 cut(s)	247, 561, 653, 1515, 2212, 2213, 2277, 2382
BmrFI	CCNGG	4 cut(s)	656, 1215, 1606, 2152
BmsI	GCATC	6 cut(s)	1114, 1216, 1426, 1903, 1960, 2022
BpiI	GAAGAC	1 cut(s)	1550
Bpu10I	CCTNAGC	2 cut(s)	647, 1825
Bpu1102I	GCTNAGC	1 cut(s)	483
BpuEI	CTTGAG	1 cut(s)	1598
BpuMI	CCSGG	2 cut(s)	656, 2152
BsaAI	YACGTR	2 cut(s)	435, 677
BsaHI	GRCGYC	5 cut(s)	311, 320, 525, 537, 1927
BsaWI	WCCGGW	1 cut(s)	171
BsaXI	ACNNNNNCTCC	2 cut(s)	515, 545
Bsc4I	CCNNNNNNNGG	8 cut(s)	413, 693, 1596, 2018, 2110, 2111, 2207, 2221
Bse118I	RCCGGY	3 cut(s)	248, 539, 781
Bse1I	ACTGG	3 cut(s)	49, 898, 1687
Bse3DI	GCAATG	2 cut(s)	1440, 2363
BseAI	TCCGGA	1 cut(s)	171
BseBI	CCWGG	2 cut(s)	1215, 1606
BseGI	GGATG	5 cut(s)	793, 1096, 1174, 1231, 1819
BseLI	CCNNNNNNNGG	8 cut(s)	413, 693, 1596, 2018, 2110, 2111, 2207, 2221
BseMI	GCAATG	2 cut(s)	1440, 2363
BseMII	CTCAG	7 cut(s)	570, 638, 1275, 1365, 1706, 1839, 1967
BseNI	ACTGG	3 cut(s)	49, 898, 1687
BseRI	GAGGAG	3 cut(s)	614, 664, 1391
BseSI	GKGCMC	1 cut(s)	699
BseX3I	CGGCCG	1 cut(s)	794
BseXI	GCAGC	5 cut(s)	790, 982, 1345, 1446, 1468
BseYI	CCCAGC	1 cut(s)	809
Bsh1236I	CGCG	2 cut(s)	84, 2288
Bsh1285I	CGRYCG	1 cut(s)	797
BshNI	GGYRCC	1 cut(s)	2275
BsiEI	CGRYCG	1 cut(s)	797
BsiHKAI	GWGCWC	4 cut(s)	729, 1048, 1366, 2229
BsiHKCI	CYCGRG	3 cut(s)	278, 935, 1365
BsiSI	CCGG	6 cut(s)	172, 249, 540, 655, 782, 2151
BsiWI	CGTACG	2 cut(s)	213, 234
BslFI	GGGAC	3 cut(s)	1994, 2168, 2197
BslI	CCNNNNNNNGG	8 cut(s)	413, 693, 1596, 2018, 2110, 2111, 2207, 2221
BsmAI	GTCTC	2 cut(s)	296, 1754
BsmBI	CGTCTC	1 cut(s)	296
BsmFI	GGGAC	3 cut(s)	1994, 2168, 2197
BsoBI	CYCGRG	3 cut(s)	278, 935, 1365
Bsp1286I	GDGCHC	5 cut(s)	699, 729, 1048, 1366, 2229
Bsp13I	TCCGGA	1 cut(s)	171
Bsp143I	GATC	5 cut(s)	20, 144, 417, 1697, 2056
Bsp1720I	GCTNAGC	1 cut(s)	483
Bsp19I	CCATGG	3 cut(s)	315, 1158, 2044
BspCNI	CTCAG	7 cut(s)	571, 639, 1276, 1366, 1705, 1838, 1966
BspEI	TCCGGA	1 cut(s)	171
BspFNI	CGCG	2 cut(s)	84, 2288
BspLI	GGNNCC	8 cut(s)	247, 561, 653, 1515, 2212, 2213, 2277, 2382
BspMAI	CTGCAG	1 cut(s)	1464
BspMI	ACCTGC	2 cut(s)	825, 1725
BspPI	GGATC	3 cut(s)	425, 1692, 2064
BspT107I	GGYRCC	1 cut(s)	2275
BspTI	CTTAAG	1 cut(s)	1634
BsrBI	CCGCTC	1 cut(s)	355
BsrDI	GCAATG	2 cut(s)	1440, 2363
BsrFI	RCCGGY	3 cut(s)	248, 539, 781
BsrI	ACTGG	3 cut(s)	49, 898, 1687
BssAI	RCCGGY	3 cut(s)	248, 539, 781
BssMI	GATC	5 cut(s)	20, 144, 417, 1697, 2056
BssNAI	GTATAC	1 cut(s)	1293
BssNI	GRCGYC	5 cut(s)	311, 320, 525, 537, 1927
BssT1I	CCWWGG	6 cut(s)	119, 315, 1086, 1158, 1768, 2044
Bst1107I	GTATAC	1 cut(s)	1293
Bst2UI	CCWGG	2 cut(s)	1215, 1606
Bst4CI	ACNGT	5 cut(s)	263, 1510, 1534, 1992, 2171
Bst6I	CTCTTC	3 cut(s)	849, 1825, 2292
BstACI	GRCGYC	5 cut(s)	311, 320, 525, 537, 1927
BstAFI	CTTAAG	1 cut(s)	1634
BstAPI	GCANNNNNTGC	1 cut(s)	1913
BstBAI	YACGTR	2 cut(s)	435, 677
BstC8I	GCNNGC	7 cut(s)	684, 867, 889, 1155, 1329, 1709, 1883
BstDEI	CTNAG	9 cut(s)	483, 579, 647, 1284, 1374, 1383, 1692, 1825, 1953
BstDSI	CCRYGG	6 cut(s)	315, 412, 1158, 2017, 2044, 2167
BstEII	GGTNACC	1 cut(s)	2171
BstENI	CCTNNNNNAGG	1 cut(s)	1594
BstF5I	GGATG	5 cut(s)	793, 1096, 1174, 1231, 1819
BstFNI	CGCG	2 cut(s)	84, 2288
BstH2I	RGCGCY	1 cut(s)	101
BstHHI	GCGC	6 cut(s)	100, 1129, 1333, 1447, 1896, 1918
BstKTI	GATC	5 cut(s)	23, 147, 420, 1700, 2059
BstMAI	GTCTC	2 cut(s)	296, 1754
BstMBI	GATC	5 cut(s)	20, 144, 417, 1697, 2056
BstMCI	CGRYCG	1 cut(s)	797
BstNI	CCWGG	2 cut(s)	1215, 1606
BstNSI	RCATGY	1 cut(s)	1157
BstPI	GGTNACC	1 cut(s)	2171
BstSCI	CCNGG	4 cut(s)	654, 1213, 1604, 2150
BstSFI	CTRYAG	2 cut(s)	1460, 2260
BstSLI	GKGCMC	1 cut(s)	699
BstUI	CGCG	2 cut(s)	84, 2288
BstV1I	GCAGC	5 cut(s)	790, 982, 1345, 1446, 1468
BstV2I	GAAGAC	1 cut(s)	1550
BstX2I	RGATCY	2 cut(s)	1697, 2056
BstYI	RGATCY	2 cut(s)	1697, 2056
BstZ17I	GTATAC	1 cut(s)	1293
BstZI	CGGCCG	1 cut(s)	794
BsuI	GTATCC	1 cut(s)	1791
BtgI	CCRYGG	6 cut(s)	315, 412, 1158, 2017, 2044, 2167
BtrI	CACGTC	1 cut(s)	1624
BtsCI	GGATG	5 cut(s)	793, 1096, 1174, 1231, 1819
BtsI	GCAGTG	1 cut(s)	1882
BtsIMutI	CAGTG	3 cut(s)	905, 1506, 1882
BveI	ACCTGC	2 cut(s)	825, 1725
Cac8I	GCNNGC	7 cut(s)	684, 867, 889, 1155, 1329, 1709, 1883
CaiI	CAGNNNCTG	1 cut(s)	1682
CciNI	GCGGCCGC	1 cut(s)	794
CfoI	GCGC	6 cut(s)	100, 1129, 1333, 1447, 1896, 1918
Cfr10I	RCCGGY	3 cut(s)	248, 539, 781
Cfr13I	GGNCC	8 cut(s)	174, 259, 560, 657, 765, 1587, 2211, 2380
CseI	GACGC	6 cut(s)	281, 300, 309, 533, 545, 1916
CsiI	ACCWGGT	1 cut(s)	1604
Csp6I	GTAC	6 cut(s)	214, 235, 721, 1661, 1680, 2302
CviQI	GTAC	6 cut(s)	214, 235, 721, 1661, 1680, 2302
DdeI	CTNAG	9 cut(s)	483, 579, 647, 1284, 1374, 1383, 1692, 1825, 1953
DpnI	GATC	5 cut(s)	22, 146, 419, 1699, 2058
DpnII	GATC	5 cut(s)	20, 144, 417, 1697, 2056
DrdI	GACNNNNNNGTC	1 cut(s)	310
DseDI	GACNNNNNNGTC	1 cut(s)	310
EaeI	YGGCCR	3 cut(s)	794, 1313, 1566
EagI	CGGCCG	1 cut(s)	794
Eam1104I	CTCTTC	3 cut(s)	849, 1825, 2292
EarI	CTCTTC	3 cut(s)	849, 1825, 2292
EciI	GGCGGA	2 cut(s)	527, 896
Ecl136II	GAGCTC	2 cut(s)	1364, 2227
EclXI	CGGCCG	1 cut(s)	794
Eco130I	CCWWGG	6 cut(s)	119, 315, 1086, 1158, 1768, 2044
Eco147I	AGGCCT	2 cut(s)	686, 1085
Eco24I	GRGCYC	2 cut(s)	1366, 2229
Eco47I	GGWCC	3 cut(s)	174, 259, 2211
Eco52I	CGGCCG	1 cut(s)	794
Eco53kI	GAGCTC	2 cut(s)	1364, 2227
Eco57I	CTGAAG	1 cut(s)	1415
Eco72I	CACGTG	2 cut(s)	435, 677
Eco88I	CYCGRG	3 cut(s)	278, 935, 1365
Eco91I	GGTNACC	1 cut(s)	2171
EcoICRI	GAGCTC	2 cut(s)	1364, 2227
EcoNI	CCTNNNNNAGG	1 cut(s)	1594
EcoO109I	RGGNCCY	4 cut(s)	765, 1587, 2211, 2380
EcoO65I	GGTNACC	1 cut(s)	2171
EcoRII	CCWGG	2 cut(s)	1213, 1604
EcoT14I	CCWWGG	6 cut(s)	119, 315, 1086, 1158, 1768, 2044
EcoT38I	GRGCYC	2 cut(s)	1366, 2229
ErhI	CCWWGG	6 cut(s)	119, 315, 1086, 1158, 1768, 2044
Esp3I	CGTCTC	1 cut(s)	296
FalI	AAGNNNNNCTT	2 cut(s)	1650, 1682
FaqI	GGGAC	3 cut(s)	1994, 2168, 2197
FauI	CCCGC	1 cut(s)	348
FblI	GTMKAC	2 cut(s)	348, 1292
FokI	GGATG	5 cut(s)	800, 1103, 1181, 1238, 1826
FriOI	GRGCYC	2 cut(s)	1366, 2229
FspAI	RTGCGCAY	1 cut(s)	1128
FspBI	CTAG	2 cut(s)	120, 1296
FspI	TGCGCA	3 cut(s)	1128, 1332, 1446
GlaI	GCGC	6 cut(s)	99, 1128, 1332, 1446, 1895, 1917
GsaI	CCCAGC	1 cut(s)	813
HaeII	RGCGCY	1 cut(s)	101
HapII	CCGG	6 cut(s)	172, 249, 540, 655, 782, 2151
HgaI	GACGC	6 cut(s)	281, 300, 309, 533, 545, 1916
HhaI	GCGC	6 cut(s)	100, 1129, 1333, 1447, 1896, 1918
Hin1I	GRCGYC	5 cut(s)	311, 320, 525, 537, 1927
Hin6I	GCGC	6 cut(s)	98, 1127, 1331, 1445, 1894, 1916
HinP1I	GCGC	6 cut(s)	98, 1127, 1331, 1445, 1894, 1916
HincII	GTYRAC	1 cut(s)	349
HindII	GTYRAC	1 cut(s)	349
HindIII	AAGCTT	1 cut(s)	2141
HinfI	GANTC	5 cut(s)	365, 460, 931, 1259, 1612
HpaII	CCGG	6 cut(s)	172, 249, 540, 655, 782, 2151
HphI	GGTGA	7 cut(s)	43, 263, 478, 763, 965, 1486, 1667
Hpy166II	GTNNAC	7 cut(s)	115, 259, 349, 448, 1293, 1936, 2130
Hpy188III	TCNNGA	8 cut(s)	172, 760, 937, 947, 1367, 1528, 1827, 2214
Hpy8I	GTNNAC	7 cut(s)	115, 259, 349, 448, 1293, 1936, 2130
HpyCH4III	ACNGT	5 cut(s)	263, 1510, 1534, 1992, 2171
HpyCH4IV	ACGT	6 cut(s)	212, 233, 434, 676, 1623, 2093
HpyF3I	CTNAG	9 cut(s)	483, 579, 647, 1284, 1374, 1383, 1692, 1825, 1953
HpySE526I	ACGT	6 cut(s)	212, 233, 434, 676, 1623, 2093
Hsp92I	GRCGYC	5 cut(s)	311, 320, 525, 537, 1927
HspAI	GCGC	6 cut(s)	98, 1127, 1331, 1445, 1894, 1916
KflI	GGGWCCC	1 cut(s)	2211
Kpn2I	TCCGGA	1 cut(s)	171
Kzo9I	GATC	5 cut(s)	20, 144, 417, 1697, 2056
Lsp1109I	GCAGC	5 cut(s)	790, 982, 1345, 1446, 1468
LweI	GCATC	6 cut(s)	1114, 1216, 1426, 1903, 1960, 2022
MabI	ACCWGGT	1 cut(s)	1604
MaeI	CTAG	2 cut(s)	120, 1296
MaeII	ACGT	6 cut(s)	212, 233, 434, 676, 1623, 2093
MaeIII	GTNAC	6 cut(s)	263, 672, 1504, 1619, 2089, 2171
MalI	GATC	5 cut(s)	22, 146, 419, 1699, 2058
MbiI	CCGCTC	1 cut(s)	355
MboI	GATC	5 cut(s)	20, 144, 417, 1697, 2056
MboII	GAAGA	8 cut(s)	385, 451, 866, 1477, 1480, 1555, 1842, 2309
MfeI	CAATTG	1 cut(s)	1179
MflI	RGATCY	2 cut(s)	1697, 2056
MhlI	GDGCHC	5 cut(s)	699, 729, 1048, 1366, 2229
MlsI	TGGCCA	1 cut(s)	1568
MluNI	TGGCCA	1 cut(s)	1568
MlyI	GAGTC	2 cut(s)	374, 1621
MmeI	TCCRAC	6 cut(s)	159, 264, 549, 558, 852, 1034
Mox20I	TGGCCA	1 cut(s)	1568
MroI	TCCGGA	1 cut(s)	171
MscI	TGGCCA	1 cut(s)	1568
MseI	TTAA	7 cut(s)	78, 476, 738, 1338, 1635, 1779, 2220
MslI	CAYNNNNRTG	3 cut(s)	1103, 1224, 1326
Msp20I	TGGCCA	1 cut(s)	1568
MspA1I	CMGCKG	2 cut(s)	733, 1459
MspCI	CTTAAG	1 cut(s)	1634
MspI	CCGG	6 cut(s)	172, 249, 540, 655, 782, 2151
MspR9I	CCNGG	4 cut(s)	656, 1215, 1606, 2152
MunI	CAATTG	1 cut(s)	1179
MvaI	CCWGG	2 cut(s)	1215, 1606
MvnI	CGCG	2 cut(s)	84, 2288
NciI	CCSGG	2 cut(s)	656, 2152
NcoI	CCATGG	3 cut(s)	315, 1158, 2044
NdeII	GATC	5 cut(s)	20, 144, 417, 1697, 2056
NlaIV	GGNNCC	8 cut(s)	247, 561, 653, 1515, 2212, 2213, 2277, 2382
NmuCI	GTSAC	5 cut(s)	263, 672, 1504, 1619, 2089
NotI	GCGGCCGC	1 cut(s)	794
NsbI	TGCGCA	3 cut(s)	1128, 1332, 1446
NspI	RCATGY	1 cut(s)	1157
PaeI	GCATGC	1 cut(s)	1157
PceI	AGGCCT	2 cut(s)	686, 1085
PcsI	WCGNNNNNNNCGW	6 cut(s)	108, 338, 426, 531, 624, 2025
PfeI	GAWTC	3 cut(s)	460, 931, 1259
Pfl23II	CGTACG	2 cut(s)	213, 234
PleI	GAGTC	2 cut(s)	373, 1620
PmaCI	CACGTG	2 cut(s)	435, 677
PmlI	CACGTG	2 cut(s)	435, 677
PpsI	GAGTC	2 cut(s)	373, 1620
Ppu21I	YACGTR	2 cut(s)	435, 677
PpuMI	RGGWCCY	1 cut(s)	2211
Psp124BI	GAGCTC	2 cut(s)	1366, 2229
Psp5II	RGGWCCY	1 cut(s)	2211
Psp6I	CCWGG	2 cut(s)	1213, 1604
PspCI	CACGTG	2 cut(s)	435, 677
PspEI	GGTNACC	1 cut(s)	2171
PspFI	CCCAGC	1 cut(s)	809
PspGI	CCWGG	2 cut(s)	1213, 1604
PspLI	CGTACG	2 cut(s)	213, 234
PspN4I	GGNNCC	8 cut(s)	247, 561, 653, 1515, 2212, 2213, 2277, 2382
PspPI	GGNCC	8 cut(s)	174, 259, 560, 657, 765, 1587, 2211, 2380
PspPPI	RGGWCCY	1 cut(s)	2211
PstI	CTGCAG	1 cut(s)	1464
PstNI	CAGNNNCTG	1 cut(s)	1682
PsuI	RGATCY	2 cut(s)	1697, 2056
PvuII	CAGCTG	2 cut(s)	733, 1459
RsaI	GTAC	6 cut(s)	215, 236, 722, 1662, 1681, 2303
RsaNI	GTAC	6 cut(s)	214, 235, 721, 1661, 1680, 2302
RseI	CAYNNNNRTG	3 cut(s)	1103, 1224, 1326
SacI	GAGCTC	2 cut(s)	1366, 2229
SalI	GTCGAC	1 cut(s)	347
SaqAI	TTAA	7 cut(s)	78, 476, 738, 1338, 1635, 1779, 2220
Sau3AI	GATC	5 cut(s)	20, 144, 417, 1697, 2056
Sau96I	GGNCC	8 cut(s)	174, 259, 560, 657, 765, 1587, 2211, 2380
SchI	GAGTC	2 cut(s)	374, 1621
ScrFI	CCNGG	4 cut(s)	656, 1215, 1606, 2152
SduI	GDGCHC	5 cut(s)	699, 729, 1048, 1366, 2229
SexAI	ACCWGGT	1 cut(s)	1604
SfaNI	GCATC	6 cut(s)	1114, 1216, 1426, 1903, 1960, 2022
SfcI	CTRYAG	2 cut(s)	1460, 2260
SinI	GGWCC	3 cut(s)	174, 259, 2211
SmiMI	CAYNNNNRTG	3 cut(s)	1103, 1224, 1326
SmlI	CTYRAG	2 cut(s)	1577, 1634
SmoI	CTYRAG	2 cut(s)	1577, 1634
SphI	GCATGC	1 cut(s)	1157
SseBI	AGGCCT	2 cut(s)	686, 1085
SspMI	CTAG	2 cut(s)	120, 1296
SstI	GAGCTC	2 cut(s)	1366, 2229
StuI	AGGCCT	2 cut(s)	686, 1085
StyD4I	CCNGG	4 cut(s)	654, 1213, 1604, 2150
StyI	CCWWGG	6 cut(s)	119, 315, 1086, 1158, 1768, 2044
TaaI	ACNGT	5 cut(s)	263, 1510, 1534, 1992, 2171
TaiI	ACGT	6 cut(s)	215, 236, 437, 679, 1626, 2096
TatI	WGTACW	1 cut(s)	2301
TauI	GCSGC	9 cut(s)	75, 98, 392, 796, 799, 881, 894, 1076, 2196
TfiI	GAWTC	3 cut(s)	460, 931, 1259
Tru1I	TTAA	7 cut(s)	78, 476, 738, 1338, 1635, 1779, 2220
Tru9I	TTAA	7 cut(s)	78, 476, 738, 1338, 1635, 1779, 2220
TscAI	CASTG	3 cut(s)	905, 1513, 1882
TseFI	GTSAC	5 cut(s)	263, 672, 1504, 1619, 2089
TseI	GCWGC	5 cut(s)	778, 995, 1333, 1456, 1459
Tsp45I	GTSAC	5 cut(s)	263, 672, 1504, 1619, 2089
TspDTI	ATGAA	4 cut(s)	178, 1121, 1661, 2354
TspGWI	ACGGA	5 cut(s)	258, 678, 2069, 2176, 2334
TspRI	CASTG	3 cut(s)	905, 1513, 1882
Vha464I	CTTAAG	1 cut(s)	1634
VpaK11BI	GGWCC	3 cut(s)	174, 259, 2211
XagI	CCTNNNNNAGG	1 cut(s)	1594
XapI	RAATTY	3 cut(s)	128, 1523, 2306
XceI	RCATGY	1 cut(s)	1157
XmaJI	CCTAGG	1 cut(s)	119
XmiI	GTMKAC	2 cut(s)	348, 1292
XspI	CTAG	2 cut(s)	120, 1296

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.