Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005588

Physical Location & Seq

Genomic Coordinates Reverse (-)

1960031 .. 1963189

Gene Structure 3159 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G06430.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2058 bp

ATGGCTGCTTCATCGGCTTGTCTTCTCGGAAATGGATTATCTGTCTACACAACCAAACAGAGGTTCCAAAAGCTTGGGCTTGATAGGACATCTAAAGTTACAGTTGTGAAGGCTTCTTTGGATGAGAAGAAACATGAAGGGAGAAGAGGTTTCTTTAAACTCTTACTAGGAAACGCTGCTGCTGGAGTTGGTTTGCTTGCAAGTGGAAACGCTAATGCAGACGAACAAGGACAAGGGGTTTCTTCGTCTAGAATGTCTTATTCTAGGTTCCTAGAGTATTTAGACAAGGGAAGGGTTGAGAAAGTAGATTTGTATGAGAATGGGACTATAGCTATTGTGGAGGCCGTTTCTCCTGAGTTGGGTAACCGGATTCAGCGTGTACGTGTGCAGCTACCTGGATTGAGTCAGGAGCTTCTCCAGAAGTTGAGGGCTAAGAATATTGATTTCGCAGCACATAATGCTCAGGAGGACCAAGGTTCTCCAATACTCAACTTGATTGGGAATCTTGCATTCCCTGTTATTTTGATTGGCGGTTTGTTCCTTCTCTCGAGAAGATCCTCTGGTGGAATGGGTGGCCCTGGTGGTCCTGGCTTCCCACTCCAAATTGGTCAGTCGAAAGCAAAGTTTCAGATGGAACCAAACACTGGTGTAACTTTTGATGATGTTGCTGGAGTCGATGAAGCCAAGCAAGATTTCATGGAAGTGGTGGAGTTTCTGAAGAAGCCTGAGAGGTTCACTGCGGTTGGTGCCCGGATCCCAAAAGGTGTTCTTCTTGTTGGTCCTCCTGGTACCGGGAAAACCCTGTTGGCAAAAGCCATTGCTGGTGAAGCTGGTGTGCCCTTCTTTTCCATCTCGGGTTCTGAGTTTGTTGAGATGTTTGTCGGTGTTGGTGCATCAAGGGTCCGCGATCTTTTCAAAAAAGCCAAAGAAAATGCTCCATGCATTGTTTTCGTGGATGAAATAGATGCTGTTGGTAGGCAAAGAGGAACTGGAATTGGTGGAGGTAATGATGAAAGAGAACAGACCCTTAATCAGCTCCTGACTGAGATGGATGGTTTTGAGGGTAACACTGGTGTTATCGTAGTTGCTGCAACCAACAGAGCAGACATTCTTGACTCCGCTTTGCTAAGACCAGGGCGTTTTGACCGGCAGGTATCTGTTGACGTTCCAGACGTTAAGGGAAGAACAGATATACTCAAGGTTCACTCGGGGAATAAGAAATTTGAAAGCGGTGTTTCACTTGAAGTAATAGCCATGAGAACACCTGGATTTAGCGGAGCTGATCTTGCAAACCTCTTGAACGAGGCTGCCATATTGGCCGGCCGCCGTGGAAAGACTGCAATATCATCAAAAGAGATTGATGACTCAATTGACAGAATTGTAGCTGGCATGGAAGGAACAGTCATGACAGATGGGAAGAGCAAAAGCTTGGTTGCTTACCATGAAGTTGGCCATGCCATATGTGGAACATTGACTCCAGGGCATGATGCTGTTCAAAAGGTCACGTTGATACCACGAGGCCAGGCTAGAGGTCTGACTTGGTTCATTCCCTCAGATGACCCAACTCTAATCTCCAAACAGCAACTCTTTGCAAGAATTGTTGGTGGACTCGGTGGTAGAGCTGCCGAAGAAGTCATCTTTGGTGAGTCTGAGGTGACTACTGGTGCAGTTAGTGACTTGCAACAGATCACCGGTTTGGCTAAGCAGATGGTGACAACATTTGGGATGTCTGAAATCGGACCATGGTCGCTAATGGATTCATCGGAGCAAAGCGATGTCATTATGAGGATGATGGCAAGAAACTCAATGTCTGAGAAGCTTGCAAATGATATTGATACAGCGGTGAAGACATTATCAGACAAAGCGTACGAGATAGCTTTGAGCCAGATTAGAAACAATCGTGAAGCCATGGACAAGATTGTTGAAATACTTCTTGAGAAAGAGACTATGTCAGGCGATGAATTCCGAGCAATCCTATCTGAATTCACAGAAATCCCACCTGAAAACCGTGTTGCTTCTTCAACATCCACATCAACACCAACACCAGCGTCTGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006091 GO:0006508 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009056 GO:0009057 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009628 GO:0009642 GO:0009644 GO:0009657 GO:0009658 GO:0009668 GO:0009719 GO:0009725 GO:0009735 GO:0009765 GO:0009892 GO:0009941 GO:0009987 GO:0010027 GO:0010033 GO:0010109 GO:0010205 GO:0010206 GO:0010304 GO:0015979 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019222 GO:0019538 GO:0019684 GO:0022607 GO:0030091 GO:0030163 GO:0031323 GO:0031324 GO:0031967 GO:0031975 GO:0031976 GO:0031977 GO:0031984 GO:0034357 GO:0034622 GO:0042221 GO:0042548 GO:0042623 GO:0042651 GO:0043155 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043467 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0048519 GO:0048523 GO:0048564 GO:0050789 GO:0050794 GO:0050896 GO:0055035 GO:0061024 GO:0065003 GO:0065007 GO:0070011 GO:0071704 GO:0071840 GO:0072593 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1905156

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA FtsH_ext Peptidase_M41

Protein Analysis

685

Amino Acids

73.2

Weight (kDa)

5.72

Isoelectric Point (pI)

32.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FtsH_ext	PF06480	71 - 151	6.4e-10	FtsH Extracellular
AAA	PF00004	256 - 388	1.9e-46	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	412 - 454	1e-12	AAA+ lid domain
Peptidase_M41	PF01434	470 - 658	5.3e-68	Peptidase family M41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005588)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06430 AT1G06430 AT1G06430 AT2G30950 AT2G30950 AT2G30950 AT2G30950
fragaria_vesca	FvH4_6g27780 FvH4_6g27780 FvH4_6g27780
malus_domestica	MD09G1234500.v1.1 MD17G1263600.v1.1
prunus_persica	Prupe.3G112700_v2.0.a1 Prupe.3G112700_v2.0.a1
pyrus_communis	pycom09g15280 pycom17g26380
rosa_chinensis	RchiOBHm_Chr2g0131061
rosa_roxburghii	Rroxscaffold_2G00113260
rosa_samantha	Rh2AG347000 Rh2AG479700 Rh2BG354500 Rh2BG461700 Rh2CG333000 Rh2DG372500 Rh2DG470900
rosa_wichuraiana	Rw2G028140 Rw2G028180 Rw4G004930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1141
Acc65I	GGTACC	1 cut(s)	788
AccB1I	GGYRCC	2 cut(s)	746, 788
AccB7I	CCANNNNNTGG	1 cut(s)	644
AccI	GTMKAC	1 cut(s)	45
AccII	CGCG	1 cut(s)	906
AciI	CCGC	8 cut(s)	531, 740, 904, 1119, 1230, 1275, 1324, 1841
AclWI	GGATC	3 cut(s)	549, 748, 761
AcoI	YGGCCR	3 cut(s)	1317, 1321, 1450
AcsI	RAATTY	3 cut(s)	1220, 1961, 1982
AcuI	CTGAAG	1 cut(s)	737
AfaI	GTAC	3 cut(s)	381, 790, 1868
AfiI	CCNNNNNNNGG	4 cut(s)	60, 359, 644, 791
AflIII	ACRYGT	1 cut(s)	382
AgeI	ACCGGT	1 cut(s)	1691
AgsI	TTSAA	7 cut(s)	916, 1226, 1244, 1300, 1496, 1925, 2022
AjnI	CCWGG	8 cut(s)	394, 577, 586, 784, 1132, 1264, 1477, 1521
AloI	GAACNNNNNNTCC	2 cut(s)	1459, 1491
Alw26I	GTCTC	1 cut(s)	1937
AlwI	GGATC	3 cut(s)	549, 748, 761
AlwNI	CAGNNNCTG	2 cut(s)	1039, 2051
Ama87I	CYCGRG	3 cut(s)	547, 853, 1207
AoxI	GGCC	6 cut(s)	342, 574, 1317, 1321, 1450, 1519
ApeKI	GCWGC	8 cut(s)	5, 176, 179, 388, 449, 1088, 1307, 1622
ApoI	RAATTY	3 cut(s)	1220, 1961, 1982
AsiGI	ACCGGT	1 cut(s)	1691
Asp700I	GAANNNNTTC	1 cut(s)	1929
Asp718I	GGTACC	1 cut(s)	788
AspS9I	GGNCC	6 cut(s)	469, 575, 584, 779, 901, 1739
AsuC2I	CCSGG	2 cut(s)	751, 793
AsuHPI	GGTGA	6 cut(s)	836, 1655, 1666, 1681, 1723, 1855
AvaI	CYCGRG	3 cut(s)	547, 853, 1207
AvaII	GGWCC	5 cut(s)	469, 584, 779, 901, 1739
BaeGI	GKGCMC	2 cut(s)	751, 840
BaeI	ACNNNNGTAYC	2 cut(s)	1827, 1860
BalI	TGGCCA	1 cut(s)	1452
BamHI	GGATCC	1 cut(s)	753
BanI	GGYRCC	2 cut(s)	746, 788
BauI	CACGAG	1 cut(s)	1515
BbsI	GAAGAC	2 cut(s)	14, 1853
BbvI	GCAGC	7 cut(s)	163, 166, 400, 461, 1075, 1294, 1609
BccI	CCATC	7 cut(s)	625, 857, 1042, 1046, 1406, 1702, 1786
BceAI	ACGGC	2 cut(s)	329, 1311
BcgI	CGANNNNNNTGC	2 cut(s)	931, 965
BciT130I	CCWGG	8 cut(s)	396, 579, 588, 786, 1134, 1266, 1479, 1523
BcnI	CCSGG	2 cut(s)	751, 793
BcoDI	GTCTC	1 cut(s)	1937
BfaI	CTAG	5 cut(s)	167, 249, 264, 272, 1527
BfmI	CTRYAG	1 cut(s)	327
BfuAI	ACCTGC	1 cut(s)	1141
BglI	GCCNNNNNGGC	1 cut(s)	1316
BisI	GCNGC	9 cut(s)	6, 177, 180, 389, 450, 1089, 1308, 1324, 1623
BlpI	GCTNAGC	1 cut(s)	1701
BlsI	GCNGC	9 cut(s)	7, 178, 181, 390, 451, 1090, 1309, 1325, 1624
Bme18I	GGWCC	5 cut(s)	469, 584, 779, 901, 1739
BmeT110I	CYCGRG	3 cut(s)	547, 853, 1207
BmgT120I	GGNCC	6 cut(s)	469, 575, 584, 779, 901, 1739
BmiI	GGNNCC	7 cut(s)	65, 269, 636, 748, 755, 790, 902
BmsI	GCATC	3 cut(s)	902, 955, 1477
BoxI	GACNNNNGTC	1 cut(s)	1744
BpiI	GAAGAC	2 cut(s)	14, 1853
BpmI	CTGGAG	4 cut(s)	204, 401, 690, 1461
Bpu10I	CCTNAGC	1 cut(s)	462
Bpu1102I	GCTNAGC	1 cut(s)	1701
BpuEI	CTTGAG	2 cut(s)	1181, 1955
BpuMI	CCSGG	2 cut(s)	751, 793
BsaAI	YACGTR	1 cut(s)	383
BsaJI	CCNNGG	7 cut(s)	472, 577, 1133, 1327, 1478, 1742, 1908
BsaWI	WCCGGW	2 cut(s)	366, 1691
BsaXI	ACNNNNNCTCC	4 cut(s)	133, 163, 1459, 1489
Bsc4I	CCNNNNNNNGG	4 cut(s)	60, 359, 644, 791
Bse118I	RCCGGY	3 cut(s)	1146, 1319, 1691
Bse1I	ACTGG	4 cut(s)	649, 994, 1075, 1666
Bse3DI	GCAATG	1 cut(s)	816
BseBI	CCWGG	8 cut(s)	396, 579, 588, 786, 1134, 1266, 1479, 1523
BseDI	CCNNGG	7 cut(s)	472, 577, 1133, 1327, 1478, 1742, 1908
BseGI	GGATG	6 cut(s)	127, 961, 1057, 1731, 1794, 2024
BseLI	CCNNNNNNNGG	4 cut(s)	60, 359, 644, 791
BseMI	GCAATG	1 cut(s)	816
BseMII	CTCAG	8 cut(s)	345, 476, 717, 852, 1035, 1566, 1641, 1803
BseNI	ACTGG	4 cut(s)	649, 994, 1075, 1666
BseSI	GKGCMC	2 cut(s)	751, 840
BseX3I	CGGCCG	1 cut(s)	1321
BseXI	GCAGC	7 cut(s)	163, 166, 400, 461, 1075, 1294, 1609
BsgI	GTGCAG	2 cut(s)	407, 1686
Bsh1236I	CGCG	1 cut(s)	906
Bsh1285I	CGRYCG	1 cut(s)	1324
BshFI	GGCC	6 cut(s)	344, 576, 1319, 1323, 1452, 1521
BshNI	GGYRCC	2 cut(s)	746, 788
BshTI	ACCGGT	1 cut(s)	1691
BsiEI	CGRYCG	1 cut(s)	1324
BsiHKCI	CYCGRG	3 cut(s)	547, 853, 1207
BsiSI	CCGG	6 cut(s)	367, 751, 792, 1147, 1320, 1692
BsiWI	CGTACG	1 cut(s)	1866
BslFI	GGGAC	1 cut(s)	337
BslI	CCNNNNNNNGG	4 cut(s)	60, 359, 644, 791
BsmAI	GTCTC	1 cut(s)	1937
BsmFI	GGGAC	1 cut(s)	337
BsmI	GAATGC	1 cut(s)	509
BsnI	GGCC	6 cut(s)	344, 576, 1319, 1323, 1452, 1521
BsoBI	CYCGRG	3 cut(s)	547, 853, 1207
Bsp1286I	GDGCHC	2 cut(s)	751, 840
Bsp143I	GATC	5 cut(s)	554, 753, 907, 1282, 1686
Bsp1720I	GCTNAGC	1 cut(s)	1701
Bsp19I	CCATGG	2 cut(s)	1742, 1908
BspACI	CCGC	8 cut(s)	531, 740, 904, 1119, 1230, 1275, 1324, 1841
BspANI	GGCC	6 cut(s)	344, 576, 1319, 1323, 1452, 1521
BspCNI	CTCAG	8 cut(s)	346, 475, 718, 853, 1036, 1565, 1642, 1804
BspFNI	CGCG	1 cut(s)	906
BspHI	TCATGA	1 cut(s)	1404
BspLI	GGNNCC	7 cut(s)	65, 269, 636, 748, 755, 790, 902
BspMI	ACCTGC	1 cut(s)	1141
BspPI	GGATC	3 cut(s)	549, 748, 761
BspQI	GCTCTTC	1 cut(s)	1412
BspT107I	GGYRCC	2 cut(s)	746, 788
BsrDI	GCAATG	1 cut(s)	816
BsrFI	RCCGGY	3 cut(s)	1146, 1319, 1691
BsrI	ACTGG	4 cut(s)	649, 994, 1075, 1666
BssAI	RCCGGY	3 cut(s)	1146, 1319, 1691
BssECI	CCNNGG	7 cut(s)	472, 577, 1133, 1327, 1478, 1742, 1908
BssMI	GATC	5 cut(s)	554, 753, 907, 1282, 1686
BssSI	CACGAG	1 cut(s)	1515
BssT1I	CCWWGG	3 cut(s)	472, 1742, 1908
Bst2BI	CACGAG	1 cut(s)	1515
Bst2UI	CCWGG	8 cut(s)	396, 579, 588, 786, 1134, 1266, 1479, 1523
Bst4CI	ACNGT	3 cut(s)	103, 1402, 2009
Bst6I	CTCTTC	2 cut(s)	139, 1412
BstAPI	GCANNNNNTGC	1 cut(s)	458
BstBAI	YACGTR	1 cut(s)	383
BstC8I	GCNNGC	4 cut(s)	198, 1321, 1387, 1821
BstDSI	CCRYGG	3 cut(s)	1327, 1742, 1908
BstEII	GGTNACC	1 cut(s)	362
BstF5I	GGATG	6 cut(s)	127, 961, 1057, 1731, 1794, 2024
BstFNI	CGCG	1 cut(s)	906
BstKTI	GATC	5 cut(s)	557, 756, 910, 1285, 1689
BstMAI	GTCTC	1 cut(s)	1937
BstMBI	GATC	5 cut(s)	554, 753, 907, 1282, 1686
BstMCI	CGRYCG	1 cut(s)	1324
BstMWI	GCNNNNNNNGC	6 cut(s)	14, 458, 746, 827, 1286, 1316
BstNI	CCWGG	8 cut(s)	396, 579, 588, 786, 1134, 1266, 1479, 1523
BstPAI	GACNNNNGTC	1 cut(s)	1744
BstPI	GGTNACC	1 cut(s)	362
BstSFI	CTRYAG	1 cut(s)	327
BstSLI	GKGCMC	2 cut(s)	751, 840
BstUI	CGCG	1 cut(s)	906
BstV1I	GCAGC	7 cut(s)	163, 166, 400, 461, 1075, 1294, 1609
BstV2I	GAAGAC	2 cut(s)	14, 1853
BstX2I	RGATCY	2 cut(s)	554, 753
BstXI	CCANNNNNNTGG	2 cut(s)	74, 1448
BstYI	RGATCY	2 cut(s)	554, 753
BstZI	CGGCCG	1 cut(s)	1321
BsuRI	GGCC	6 cut(s)	344, 576, 1319, 1323, 1452, 1521
BtgI	CCRYGG	3 cut(s)	1327, 1742, 1908
BtgZI	GCGATG	2 cut(s)	1788, 1971
BtsCI	GGATG	6 cut(s)	127, 961, 1057, 1731, 1794, 2024
BtsI	GCAGTG	1 cut(s)	735
BtsIMutI	CAGTG	3 cut(s)	642, 735, 1068
BveI	ACCTGC	1 cut(s)	1141
Cac8I	GCNNGC	4 cut(s)	198, 1321, 1387, 1821
CaiI	CAGNNNCTG	2 cut(s)	1039, 2051
CciI	TCATGA	1 cut(s)	1404
Cfr10I	RCCGGY	3 cut(s)	1146, 1319, 1691
Cfr13I	GGNCC	6 cut(s)	469, 575, 584, 779, 901, 1739
CseI	GACGC	1 cut(s)	2037
Csp6I	GTAC	3 cut(s)	380, 789, 1867
CspAI	ACCGGT	1 cut(s)	1691
CviQI	GTAC	3 cut(s)	380, 789, 1867
DpnI	GATC	5 cut(s)	556, 755, 909, 1284, 1688
DpnII	GATC	5 cut(s)	554, 753, 907, 1282, 1686
DraI	TTTAAA	1 cut(s)	157
EaeI	YGGCCR	3 cut(s)	1317, 1321, 1450
EagI	CGGCCG	1 cut(s)	1321
Eam1104I	CTCTTC	2 cut(s)	139, 1412
EarI	CTCTTC	2 cut(s)	139, 1412
EclXI	CGGCCG	1 cut(s)	1321
Eco130I	CCWWGG	3 cut(s)	472, 1742, 1908
Eco47I	GGWCC	5 cut(s)	469, 584, 779, 901, 1739
Eco52I	CGGCCG	1 cut(s)	1321
Eco57I	CTGAAG	1 cut(s)	737
Eco88I	CYCGRG	3 cut(s)	547, 853, 1207
Eco91I	GGTNACC	1 cut(s)	362
EcoO65I	GGTNACC	1 cut(s)	362
EcoRI	GAATTC	2 cut(s)	1961, 1982
EcoRII	CCWGG	8 cut(s)	394, 577, 586, 784, 1132, 1264, 1477, 1521
EcoT14I	CCWWGG	3 cut(s)	472, 1742, 1908
EcoT22I	ATGCAT	1 cut(s)	944
ErhI	CCWWGG	3 cut(s)	472, 1742, 1908
FalI	AAGNNNNNCTT	2 cut(s)	753, 785
FaqI	GGGAC	1 cut(s)	337
FauNDI	CATATG	1 cut(s)	1460
FblI	GTMKAC	1 cut(s)	45
Fnu4HI	GCNGC	9 cut(s)	6, 177, 180, 389, 450, 1089, 1308, 1324, 1623
FokI	GGATG	6 cut(s)	134, 968, 1064, 1738, 1801, 2011
FseI	GGCCGGCC	1 cut(s)	1323
Fsp4HI	GCNGC	9 cut(s)	6, 177, 180, 389, 450, 1089, 1308, 1324, 1623
FspBI	CTAG	5 cut(s)	167, 249, 264, 272, 1527
GluI	GCNGC	9 cut(s)	6, 177, 180, 389, 450, 1089, 1308, 1324, 1623
GsuI	CTGGAG	4 cut(s)	204, 401, 690, 1461
HaeIII	GGCC	6 cut(s)	344, 576, 1319, 1323, 1452, 1521
HapII	CCGG	6 cut(s)	367, 751, 792, 1147, 1320, 1692
HgaI	GACGC	1 cut(s)	2037
HincII	GTYRAC	1 cut(s)	1162
HindII	GTYRAC	1 cut(s)	1162
HindIII	AAGCTT	3 cut(s)	71, 1426, 1817
HpaII	CCGG	6 cut(s)	367, 751, 792, 1147, 1320, 1692
HphI	GGTGA	6 cut(s)	836, 1655, 1666, 1681, 1723, 1855
Hpy166II	GTNNAC	6 cut(s)	46, 380, 735, 1162, 1204, 1607
Hpy8I	GTNNAC	6 cut(s)	46, 380, 735, 1162, 1204, 1607
HpyAV	CCTTC	6 cut(s)	103, 131, 285, 551, 850, 1388
HpyCH4III	ACNGT	3 cut(s)	103, 1402, 2009
HpyCH4IV	ACGT	4 cut(s)	382, 1164, 1173, 1505
HpyF10VI	GCNNNNNNNGC	6 cut(s)	14, 458, 746, 827, 1286, 1316
HpySE526I	ACGT	4 cut(s)	382, 1164, 1173, 1505
KpnI	GGTACC	1 cut(s)	792
KroI	GCCGGC	1 cut(s)	1319
KroNI	GCCGGC	1 cut(s)	1321
Kzo9I	GATC	5 cut(s)	554, 753, 907, 1282, 1686
LguI	GCTCTTC	1 cut(s)	1412
LmnI	GCTCC	5 cut(s)	409, 940, 1041, 1277, 1765
Lsp1109I	GCAGC	7 cut(s)	163, 166, 400, 461, 1075, 1294, 1609
LweI	GCATC	3 cut(s)	902, 955, 1477
MaeI	CTAG	5 cut(s)	167, 249, 264, 272, 1527
MaeII	ACGT	4 cut(s)	382, 1164, 1173, 1505
MaeIII	GTNAC	8 cut(s)	97, 362, 649, 1064, 1501, 1654, 1673, 1711
MalI	GATC	5 cut(s)	556, 755, 909, 1284, 1688
MboI	GATC	5 cut(s)	554, 753, 907, 1282, 1686
MfeI	CAATTG	1 cut(s)	1368
MflI	RGATCY	2 cut(s)	554, 753
MhlI	GDGCHC	2 cut(s)	751, 840
MlsI	TGGCCA	1 cut(s)	1452
MluCI	AATT	8 cut(s)	603, 993, 1220, 1368, 1377, 1596, 1961, 1982
MluNI	TGGCCA	1 cut(s)	1452
MlyI	GAGTC	7 cut(s)	412, 681, 1109, 1358, 1468, 1602, 1655
Mox20I	TGGCCA	1 cut(s)	1452
Mph1103I	ATGCAT	1 cut(s)	944
MroNI	GCCGGC	1 cut(s)	1319
MroXI	GAANNNNTTC	1 cut(s)	1929
MscI	TGGCCA	1 cut(s)	1452
MseI	TTAA	3 cut(s)	156, 1029, 1176
MslI	CAYNNNNRTG	1 cut(s)	701
Msp20I	TGGCCA	1 cut(s)	1452
MspA1I	CMGCKG	1 cut(s)	1841
MspI	CCGG	6 cut(s)	367, 751, 792, 1147, 1320, 1692
MunI	CAATTG	1 cut(s)	1368
Mva1269I	GAATGC	1 cut(s)	509
MvaI	CCWGG	8 cut(s)	396, 579, 588, 786, 1134, 1266, 1479, 1523
MvnI	CGCG	1 cut(s)	906
MwoI	GCNNNNNNNGC	6 cut(s)	14, 458, 746, 827, 1286, 1316
NaeI	GCCGGC	1 cut(s)	1321
NciI	CCSGG	2 cut(s)	751, 793
NcoI	CCATGG	2 cut(s)	1742, 1908
NdeI	CATATG	1 cut(s)	1460
NdeII	GATC	5 cut(s)	554, 753, 907, 1282, 1686
NgoMIV	GCCGGC	1 cut(s)	1319
NlaIV	GGNNCC	7 cut(s)	65, 269, 636, 748, 755, 790, 902
NmuCI	GTSAC	4 cut(s)	1501, 1654, 1673, 1711
NsiI	ATGCAT	1 cut(s)	944
PaeR7I	CTCGAG	1 cut(s)	547
PagI	TCATGA	1 cut(s)	1404
PciSI	GCTCTTC	1 cut(s)	1412
PcsI	WCGNNNNNNNCGW	1 cut(s)	1170
PctI	GAATGC	1 cut(s)	509
PdiI	GCCGGC	1 cut(s)	1321
PdmI	GAANNNNTTC	1 cut(s)	1929
PfeI	GAWTC	3 cut(s)	370, 502, 1757
Pfl23II	CGTACG	1 cut(s)	1866
PflFI	GACNNNGTC	1 cut(s)	1948
PflMI	CCANNNNNTGG	1 cut(s)	644
PinAI	ACCGGT	1 cut(s)	1691
PkrI	GCNGC	9 cut(s)	7, 178, 181, 390, 451, 1090, 1309, 1325, 1624
PleI	GAGTC	7 cut(s)	411, 680, 1109, 1358, 1468, 1602, 1654
PpsI	GAGTC	7 cut(s)	411, 680, 1109, 1358, 1468, 1602, 1654
Ppu21I	YACGTR	1 cut(s)	383
PshAI	GACNNNNGTC	1 cut(s)	1744
Psp6I	CCWGG	8 cut(s)	394, 577, 586, 784, 1132, 1264, 1477, 1521
PspEI	GGTNACC	1 cut(s)	362
PspGI	CCWGG	8 cut(s)	394, 577, 586, 784, 1132, 1264, 1477, 1521
PspLI	CGTACG	1 cut(s)	1866
PspN4I	GGNNCC	7 cut(s)	65, 269, 636, 748, 755, 790, 902
PspPI	GGNCC	6 cut(s)	469, 575, 584, 779, 901, 1739
PstNI	CAGNNNCTG	2 cut(s)	1039, 2051
PsuI	RGATCY	2 cut(s)	554, 753
PsyI	GACNNNGTC	1 cut(s)	1948
RigI	GGCCGGCC	1 cut(s)	1323
RsaI	GTAC	3 cut(s)	381, 790, 1868
RsaNI	GTAC	3 cut(s)	380, 789, 1867
RseI	CAYNNNNRTG	1 cut(s)	701
SapI	GCTCTTC	1 cut(s)	1412
SaqAI	TTAA	3 cut(s)	156, 1029, 1176
SatI	GCNGC	9 cut(s)	6, 177, 180, 389, 450, 1089, 1308, 1324, 1623
Sau3AI	GATC	5 cut(s)	554, 753, 907, 1282, 1686
Sau96I	GGNCC	6 cut(s)	469, 575, 584, 779, 901, 1739
SchI	GAGTC	7 cut(s)	412, 681, 1109, 1358, 1468, 1602, 1655
SduI	GDGCHC	2 cut(s)	751, 840
SfaNI	GCATC	3 cut(s)	902, 955, 1477
SfcI	CTRYAG	1 cut(s)	327
Sfr274I	CTCGAG	1 cut(s)	547
SinI	GGWCC	5 cut(s)	469, 584, 779, 901, 1739
SlaI	CTCGAG	1 cut(s)	547
SmiMI	CAYNNNNRTG	1 cut(s)	701
SmlI	CTYRAG	3 cut(s)	547, 1196, 1934
SmoI	CTYRAG	3 cut(s)	547, 1196, 1934
Sse9I	AATT	8 cut(s)	603, 993, 1220, 1368, 1377, 1596, 1961, 1982
SsiI	CCGC	8 cut(s)	531, 740, 904, 1119, 1230, 1275, 1324, 1841
SspI	AATATT	1 cut(s)	439
SspMI	CTAG	5 cut(s)	167, 249, 264, 272, 1527
StyI	CCWWGG	3 cut(s)	472, 1742, 1908
TaaI	ACNGT	3 cut(s)	103, 1402, 2009
TaiI	ACGT	4 cut(s)	385, 1167, 1176, 1508
TaqI	TCGA	3 cut(s)	548, 614, 675
TasI	AATT	8 cut(s)	603, 993, 1220, 1368, 1377, 1596, 1961, 1982
TauI	GCSGC	1 cut(s)	1326
TfiI	GAWTC	3 cut(s)	370, 502, 1757
Tru1I	TTAA	3 cut(s)	156, 1029, 1176
Tru9I	TTAA	3 cut(s)	156, 1029, 1176
TscAI	CASTG	3 cut(s)	649, 742, 1075
TseFI	GTSAC	4 cut(s)	1501, 1654, 1673, 1711
TseI	GCWGC	8 cut(s)	5, 176, 179, 388, 449, 1088, 1307, 1622
Tsp45I	GTSAC	4 cut(s)	1501, 1654, 1673, 1711
TspDTI	ATGAA	9 cut(s)	150, 685, 693, 972, 1026, 1458, 1534, 1749, 1974
TspRI	CASTG	3 cut(s)	649, 742, 1075
Tth111I	GACNNNGTC	1 cut(s)	1948
Van91I	CCANNNNNTGG	1 cut(s)	644
VpaK11BI	GGWCC	5 cut(s)	469, 584, 779, 901, 1739
XapI	RAATTY	3 cut(s)	1220, 1961, 1982
XbaI	TCTAGA	1 cut(s)	248
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1460
XhoI	CTCGAG	1 cut(s)	547
XmiI	GTMKAC	1 cut(s)	45
XmnI	GAANNNNTTC	1 cut(s)	1929
XspI	CTAG	5 cut(s)	167, 249, 264, 272, 1527
Zsp2I	ATGCAT	1 cut(s)	944

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.