Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0005588

Physical Location & Seq

Genomic Coordinates Reverse (-)

47144268 .. 47148617

Gene Structure 4350 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ50244

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2073 bp

ATGATTGATATGGCAGCATCATCAGCTTGCCTTGTGGGGAATGGTTTATCTACCCATGGTACAAAACCAAGTTTGAGCAAGGATTTCTGTGGGAGACCTCTCTTCCACTCTTCAACTCTTCCATCATTGGCTAAGGGGACAAAAGCAGTTCTTGTAAAGGCATCATTGGACCAAAAGCAATATGAAGGAAGAAGAGGGTTTATGAAGTTGCTTGGAGTACCTGCTTTACTTGGAGCATCGAGTGCTAAGGCCGATGATCAAGGGCCCTCTTCTTCACGGATGTCTTATTCTAGGTTCTTGGAGTATCTAGACAAGGACAGGGTGACAAAAGTTGATCTTTTTGAGAACGGGACCATAGCTATTGTTGAGGCTATCTCTCCTGAGTTAGGGAACCGATTGCAGCGAGTTCGTGTGCAACTCCCAGGACTAAGCCAGGAGCTTCTTCAAAAGTTCAGGGAAAAGAACATCGACTTTGCGGCACATAATGCTCAAGAAGACTCGGGCAACCTTTTATTTAACCTGATTGGAAATTTGGCTTTCCCACTAATTTTAATTGGGGGCTTGTTCTTACTCTCAAGGCGTTCAGGTGGAGGCATGGGCGGTCCTGGTGGGCCTGGGTTTCCCCTCTCCTTTGGTCAGTCTAAAGCCAAGTTCCAAATGGAACCAAACACTGGAGTGACATTTGATGATGTTGCTGGGGTGGATGAAGCCAAGCAGGATTTTGTAGAGGTGGTGGAGTTCTTAAAGAAGCCTGAGAGATTCACTGCTGTTGGAGCTCGCATTCCTAAAGGTGTTCTTCTTGTCGGCCCTCCAGGAACTGGAAAGACTCTGCTAGCAAAGGCAATTGCTGGCGAAGCTGGTGTTCCTTTTTTCTCCATCTCAGGTTCTGAGTTTGTTGAAATGTTTGTTGGTGTTGGTGCTTCCCGAGTCCGTGATCTTTTTAAGAAGGCTAAGGAAAATGCACCTTGCATTGTATTTGTTGATGAAATTGATGCTGTTGGACGGCAAAGAGGAACTGGAATTGGTGGAGGCAATGATGAAAGAGAACAGACCCTTAATCAGCTTTTGACAGAAATGGATGGTTTTGAGGGTAACACTGGTATCATTGTGGTTGCAGCAACTAACAGGGCAGATATTCTCGACTCTGCCTTGTTGAGGCCTGGTCGGTTTGACAGGCAGGTGTCTGTTGATGTTCCAGACGTACGTGGCAGAACAGATATCTTGAAGGTTCATGCTAGCAATAAGAAGTTTGAGGGAAATGTTTCCCTTGATGTTGTAGCTATGAGGACACCTGGTTTTAGTGGAGCAGATCTTGCCAACCTCCTAAATGAAGCAGCTATATTGGCTGGTCGGCGTGGGAAGTCGGCAATTTCATCTAAAGAGATTGATGATTCAATTGATAGAATAGTGGCTGGAATGGAAGGAACAGTAATGACAGATGGAAAGAGCAAAAGTCTGGTAGCATACCACGAAGTTGGGCACGCCATCTGTGGGACATTGACTCCAGGGCACGATGCTGTTCAGAAAGTGACCCTAGTTCCACGAGGTCAAGCACGTGGTCTTACATGGTTCATTCCTGCAGATGATCCTACCTTGATCTCCAAGCAGCAACTATTTGCAAGAATTGTTGGTGGGCTTGGTGGTAGAGCAGCAGAGGAAGTGATCTTTGGTGAGCCAGAGGTGACAACAGGTGCAGCTGGTGATTTGCAGCAGATCACTGGTTTAGCCAAACAGATGGTAACCACATTTGGAATGTCCGACATTGGCCCATGGTCATTGATGGATTCAGCTCAGAGTGGTGATGTCATAATGAGAATGATGGCAAGGAACTCAATGTCAGAAAAGCTTGCTGAAGACATTGATTCTGCTATTAAGAGATTATCTGATGAAGCATATGAGATTGCATTGAGCCACATAAGAAACAACCGTGAAGCCATGGACAAGATAGTGGAGGTCCTTCTTGAGAAGGAAACAATGACCGGGGATGAATTCCGGGCAATCCTCTCTGAATTCACTGAAATCCCAGTCGAAAACCGGGTTGCTGCTGCGGCCCCTACTCCAGTCGCTGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006091 GO:0006508 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009056 GO:0009057 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009628 GO:0009642 GO:0009644 GO:0009657 GO:0009658 GO:0009668 GO:0009719 GO:0009725 GO:0009735 GO:0009765 GO:0009892 GO:0009941 GO:0009987 GO:0010027 GO:0010033 GO:0010109 GO:0010205 GO:0010206 GO:0010304 GO:0015979 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019222 GO:0019538 GO:0019684 GO:0022607 GO:0030091 GO:0030163 GO:0031323 GO:0031324 GO:0031967 GO:0031975 GO:0031976 GO:0031977 GO:0031984 GO:0034357 GO:0034622 GO:0042221 GO:0042548 GO:0042623 GO:0042651 GO:0043155 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043467 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0048519 GO:0048523 GO:0048564 GO:0050789 GO:0050794 GO:0050896 GO:0055035 GO:0061024 GO:0065003 GO:0065007 GO:0070011 GO:0071704 GO:0071840 GO:0072593 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1905156

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA FtsH_ext Peptidase_M41

Protein Analysis

690

Amino Acids

73.68

Weight (kDa)

5.65

Isoelectric Point (pI)

31.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FtsH_ext	PF06480	85 - 160	1.8e-07	FtsH Extracellular
AAA	PF00004	265 - 397	4e-46	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	420 - 463	1.6e-12	AAA+ lid domain
Peptidase_M41	PF01434	479 - 667	7.9e-68	Peptidase family M41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005588)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06430 AT1G06430 AT1G06430 AT2G30950 AT2G30950 AT2G30950 AT2G30950
fragaria_vesca	FvH4_6g27780 FvH4_6g27780 FvH4_6g27780
malus_domestica	MD09G1234500.v1.1 MD17G1263600.v1.1
prunus_persica	Prupe.3G112700_v2.0.a1 Prupe.3G112700_v2.0.a1
pyrus_communis	pycom09g15280 pycom17g26380
rosa_chinensis	RchiOBHm_Chr2g0131061
rosa_roxburghii	Rroxscaffold_2G00113260
rosa_samantha	Rh2AG347000 Rh2AG479700 Rh2BG354500 Rh2BG461700 Rh2CG333000 Rh2DG372500 Rh2DG470900
rosa_wichuraiana	Rw2G028140 Rw2G028180 Rw4G004930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1168
Acc36I	ACCTGC	2 cut(s)	229, 1168
AccB7I	CCANNNNNTGG	2 cut(s)	671, 818
AciI	CCGC	3 cut(s)	476, 600, 2048
AclWI	GGATC	1 cut(s)	1580
AcsI	RAATTY	3 cut(s)	529, 1988, 2009
AcuI	CTGAAG	1 cut(s)	1872
AcvI	CACGTG	1 cut(s)	1556
AfaI	GTAC	3 cut(s)	61, 219, 1203
AfiI	CCNNNNNNNGG	5 cut(s)	386, 671, 818, 1155, 1491
AgsI	TTSAA	5 cut(s)	114, 446, 899, 1225, 1395
AjnI	CCWGG	8 cut(s)	421, 432, 604, 613, 811, 1159, 1291, 1504
AjuI	GAANNNNNNNTTGG	4 cut(s)	891, 923, 1650, 1682
AleI	CACNNNNGTG	1 cut(s)	674
Alw21I	GWGCWC	1 cut(s)	778
Alw26I	GTCTC	1 cut(s)	88
AlwI	GGATC	1 cut(s)	1580
AlwNI	CAGNNNCTG	3 cut(s)	818, 887, 2066
Ama87I	CYCGRG	2 cut(s)	499, 924
AoxI	GGCC	7 cut(s)	249, 263, 611, 805, 1157, 1765, 2049
ApaI	GGGCCC	1 cut(s)	267
ApoI	RAATTY	3 cut(s)	529, 1988, 2009
Asp700I	GAANNNNTTC	1 cut(s)	1261
AsuC2I	CCSGG	3 cut(s)	1981, 1994, 2036
AsuHPI	GGTGA	5 cut(s)	334, 1682, 1693, 1712, 1811
AsuNHI	GCTAGC	2 cut(s)	832, 1235
AvaI	CYCGRG	2 cut(s)	499, 924
AvaII	GGWCC	4 cut(s)	169, 351, 602, 1954
BaeGI	GKGCMC	3 cut(s)	267, 1482, 1512
BaeI	ACNNNNGTAYC	2 cut(s)	1084, 1117
BanII	GRGCYC	2 cut(s)	267, 778
BauI	CACGAG	1 cut(s)	1542
BbrPI	CACGTG	1 cut(s)	1556
BbsI	GAAGAC	2 cut(s)	501, 1860
Bbv12I	GWGCWC	1 cut(s)	778
BccI	CCATC	8 cut(s)	130, 884, 1073, 1433, 1493, 1729, 1774, 1813
BceAI	ACGGC	1 cut(s)	1019
BcgI	CGANNNNNNTGC	2 cut(s)	389, 423
BciT130I	CCWGG	8 cut(s)	423, 434, 606, 615, 813, 1161, 1293, 1506
BclI	TGATCA	1 cut(s)	256
BcnI	CCSGG	3 cut(s)	1981, 1994, 2036
BcoDI	GTCTC	1 cut(s)	88
BfaI	CTAG	5 cut(s)	291, 308, 833, 1236, 1535
BfmI	CTRYAG	1 cut(s)	1578
BfuAI	ACCTGC	2 cut(s)	229, 1168
BglII	AGATCT	1 cut(s)	1309
Bme18I	GGWCC	4 cut(s)	169, 351, 602, 1954
BmeT110I	CYCGRG	2 cut(s)	499, 924
BmiI	GGNNCC	5 cut(s)	265, 352, 392, 663, 2052
BmrI	ACTGGG	1 cut(s)	2018
BmsI	GCATC	5 cut(s)	26, 170, 245, 982, 1504
BmtI	GCTAGC	2 cut(s)	836, 1239
BmuI	ACTGGG	1 cut(s)	2018
BpiI	GAAGAC	2 cut(s)	501, 1860
BplI	GAGNNNNNCTC	2 cut(s)	359, 391
BpmI	CTGGAG	4 cut(s)	693, 795, 1488, 2043
Bpu10I	CCTNAGC	3 cut(s)	132, 246, 951
BpuEI	CTTGAG	3 cut(s)	474, 559, 1982
BpuMI	CCSGG	3 cut(s)	1981, 1994, 2036
BsaAI	YACGTR	2 cut(s)	1205, 1556
BsaI	GGTCTC	1 cut(s)	88
BsaJI	CCNNGG	7 cut(s)	55, 421, 614, 1505, 1769, 1935, 1980
BsaXI	ACNNNNNCTCC	2 cut(s)	1486, 1516
Bsc4I	CCNNNNNNNGG	5 cut(s)	386, 671, 818, 1155, 1491
Bse1I	ACTGG	7 cut(s)	676, 823, 1021, 1102, 1723, 2024, 2060
Bse3DI	GCAATG	1 cut(s)	1039
BseBI	CCWGG	8 cut(s)	423, 434, 606, 615, 813, 1161, 1293, 1506
BseDI	CCNNGG	7 cut(s)	55, 421, 614, 1505, 1769, 1935, 1980
BseGI	GGATG	4 cut(s)	285, 709, 1084, 1990
BseLI	CCNNNNNNNGG	5 cut(s)	386, 671, 818, 1155, 1491
BseMI	GCAATG	1 cut(s)	1039
BseMII	CTCAG	5 cut(s)	372, 744, 879, 894, 1805
BseNI	ACTGG	7 cut(s)	676, 823, 1021, 1102, 1723, 2024, 2060
BseSI	GKGCMC	3 cut(s)	267, 1482, 1512
BseYI	CCCAGC	1 cut(s)	695
BsgI	GTGCAG	1 cut(s)	1713
BshFI	GGCC	7 cut(s)	251, 265, 613, 807, 1159, 1767, 2051
BsiHKAI	GWGCWC	1 cut(s)	778
BsiHKCI	CYCGRG	2 cut(s)	499, 924
BsiSI	CCGG	3 cut(s)	1980, 1993, 2035
BsiWI	CGTACG	1 cut(s)	1201
BslFI	GGGAC	3 cut(s)	151, 364, 1507
BslI	CCNNNNNNNGG	5 cut(s)	386, 671, 818, 1155, 1491
BsmAI	GTCTC	1 cut(s)	88
BsmFI	GGGAC	3 cut(s)	151, 364, 1507
BsmI	GAATGC	1 cut(s)	780
BsnI	GGCC	7 cut(s)	251, 265, 613, 807, 1159, 1767, 2051
Bso31I	GGTCTC	1 cut(s)	88
BsoBI	CYCGRG	2 cut(s)	499, 924
Bsp120I	GGGCCC	1 cut(s)	263
Bsp1286I	GDGCHC	4 cut(s)	267, 778, 1482, 1512
Bsp143I	GATC	8 cut(s)	256, 334, 934, 1309, 1585, 1596, 1662, 1713
Bsp19I	CCATGG	3 cut(s)	55, 1769, 1935
BspACI	CCGC	3 cut(s)	476, 600, 2048
BspANI	GGCC	7 cut(s)	251, 265, 613, 807, 1159, 1767, 2051
BspCNI	CTCAG	5 cut(s)	373, 745, 880, 893, 1804
BspLI	GGNNCC	5 cut(s)	265, 352, 392, 663, 2052
BspMAI	CTGCAG	1 cut(s)	1582
BspMI	ACCTGC	2 cut(s)	229, 1168
BspOI	GCTAGC	2 cut(s)	836, 1239
BspPI	GGATC	1 cut(s)	1580
BspTNI	GGTCTC	1 cut(s)	88
BsrDI	GCAATG	1 cut(s)	1039
BsrI	ACTGG	7 cut(s)	676, 823, 1021, 1102, 1723, 2024, 2060
BssECI	CCNNGG	7 cut(s)	55, 421, 614, 1505, 1769, 1935, 1980
BssMI	GATC	8 cut(s)	256, 334, 934, 1309, 1585, 1596, 1662, 1713
BssSI	CACGAG	1 cut(s)	1542
BssT1I	CCWWGG	3 cut(s)	55, 1769, 1935
Bst2BI	CACGAG	1 cut(s)	1542
Bst2UI	CCWGG	8 cut(s)	423, 434, 606, 615, 813, 1161, 1293, 1506
Bst4CI	ACNGT	2 cut(s)	1429, 1928
Bst6I	CTCTTC	5 cut(s)	107, 115, 123, 187, 274
BstAPI	GCANNNNNTGC	3 cut(s)	242, 485, 1313
BstBAI	YACGTR	2 cut(s)	1205, 1556
BstC8I	GCNNGC	7 cut(s)	28, 778, 834, 850, 1237, 1482, 1848
BstDEI	CTNAG	9 cut(s)	132, 246, 381, 428, 753, 880, 888, 951, 1791
BstDSI	CCRYGG	3 cut(s)	55, 1769, 1935
BstEII	GGTNACC	1 cut(s)	1738
BstENI	CCTNNNNNAGG	2 cut(s)	384, 1153
BstF5I	GGATG	4 cut(s)	285, 709, 1084, 1990
BstKTI	GATC	8 cut(s)	259, 337, 937, 1312, 1588, 1599, 1665, 1716
BstMAI	GTCTC	1 cut(s)	88
BstMBI	GATC	8 cut(s)	256, 334, 934, 1309, 1585, 1596, 1662, 1713
BstMWI	GCNNNNNNNGC	8 cut(s)	23, 242, 485, 773, 854, 1313, 1343, 2048
BstNI	CCWGG	8 cut(s)	423, 434, 606, 615, 813, 1161, 1293, 1506
BstPI	GGTNACC	1 cut(s)	1738
BstSFI	CTRYAG	1 cut(s)	1578
BstSLI	GKGCMC	3 cut(s)	267, 1482, 1512
BstV2I	GAAGAC	2 cut(s)	501, 1860
BstX2I	RGATCY	1 cut(s)	1309
BstXI	CCANNNNNNTGG	2 cut(s)	1475, 1735
BstYI	RGATCY	1 cut(s)	1309
BsuRI	GGCC	7 cut(s)	251, 265, 613, 807, 1159, 1767, 2051
BtgI	CCRYGG	3 cut(s)	55, 1769, 1935
BtsCI	GGATG	4 cut(s)	285, 709, 1084, 1990
BtsI	GCAGTG	1 cut(s)	762
BtsIMutI	CAGTG	5 cut(s)	669, 762, 1095, 1716, 2013
BveI	ACCTGC	2 cut(s)	229, 1168
Cac8I	GCNNGC	7 cut(s)	28, 778, 834, 850, 1237, 1482, 1848
CaiI	CAGNNNCTG	3 cut(s)	818, 887, 2066
CsiI	ACCWGGT	1 cut(s)	1291
Csp6I	GTAC	3 cut(s)	60, 218, 1202
CviAII	CATG	6 cut(s)	56, 595, 1232, 1566, 1770, 1936
CviQI	GTAC	3 cut(s)	60, 218, 1202
DdeI	CTNAG	9 cut(s)	132, 246, 381, 428, 753, 880, 888, 951, 1791
DpnI	GATC	8 cut(s)	258, 336, 936, 1311, 1587, 1598, 1664, 1715
DpnII	GATC	8 cut(s)	256, 334, 934, 1309, 1585, 1596, 1662, 1713
Eam1104I	CTCTTC	5 cut(s)	107, 115, 123, 187, 274
EarI	CTCTTC	5 cut(s)	107, 115, 123, 187, 274
Ecl136II	GAGCTC	1 cut(s)	776
Eco130I	CCWWGG	3 cut(s)	55, 1769, 1935
Eco147I	AGGCCT	1 cut(s)	1159
Eco24I	GRGCYC	2 cut(s)	267, 778
Eco31I	GGTCTC	1 cut(s)	88
Eco32I	GATATC	1 cut(s)	1219
Eco47I	GGWCC	4 cut(s)	169, 351, 602, 1954
Eco53kI	GAGCTC	1 cut(s)	776
Eco57I	CTGAAG	1 cut(s)	1872
Eco72I	CACGTG	1 cut(s)	1556
Eco88I	CYCGRG	2 cut(s)	499, 924
Eco91I	GGTNACC	1 cut(s)	1738
EcoICRI	GAGCTC	1 cut(s)	776
EcoNI	CCTNNNNNAGG	2 cut(s)	384, 1153
EcoO109I	RGGNCCY	3 cut(s)	263, 264, 1954
EcoO65I	GGTNACC	1 cut(s)	1738
EcoRI	GAATTC	2 cut(s)	1988, 2009
EcoRII	CCWGG	8 cut(s)	421, 432, 604, 613, 811, 1159, 1291, 1504
EcoRV	GATATC	1 cut(s)	1219
EcoT14I	CCWWGG	3 cut(s)	55, 1769, 1935
EcoT38I	GRGCYC	2 cut(s)	267, 778
ErhI	CCWWGG	3 cut(s)	55, 1769, 1935
FaeI	CATG	6 cut(s)	59, 598, 1235, 1569, 1773, 1939
FalI	AAGNNNNNCTT	6 cut(s)	135, 167, 321, 353, 780, 812
FaqI	GGGAC	3 cut(s)	151, 364, 1507
FatI	CATG	6 cut(s)	55, 594, 1231, 1565, 1769, 1935
FauNDI	CATATG	1 cut(s)	1894
FbaI	TGATCA	1 cut(s)	256
FokI	GGATG	4 cut(s)	292, 716, 1091, 1997
FriOI	GRGCYC	2 cut(s)	267, 778
FspBI	CTAG	5 cut(s)	291, 308, 833, 1236, 1535
GsaI	CCCAGC	1 cut(s)	699
GsuI	CTGGAG	4 cut(s)	693, 795, 1488, 2043
HaeIII	GGCC	7 cut(s)	251, 265, 613, 807, 1159, 1767, 2051
HapII	CCGG	3 cut(s)	1980, 1993, 2035
Hin1II	CATG	6 cut(s)	59, 598, 1235, 1569, 1773, 1939
HindIII	AAGCTT	1 cut(s)	1844
HinfI	GANTC	9 cut(s)	497, 759, 826, 927, 1142, 1391, 1501, 1784, 1862
HpaII	CCGG	3 cut(s)	1980, 1993, 2035
HphI	GGTGA	5 cut(s)	334, 1682, 1693, 1712, 1811
Hpy188I	TCNGA	7 cut(s)	889, 1524, 1759, 1794, 1840, 1885, 2008
Hpy188III	TCNNGA	8 cut(s)	308, 380, 491, 924, 1139, 1196, 1222, 1961
HpyAV	CCTTC	6 cut(s)	179, 940, 1219, 1415, 1960, 1967
HpyCH4III	ACNGT	2 cut(s)	1429, 1928
HpyCH4IV	ACGT	3 cut(s)	1200, 1204, 1555
HpyF10VI	GCNNNNNNNGC	8 cut(s)	23, 242, 485, 773, 854, 1313, 1343, 2048
HpyF3I	CTNAG	9 cut(s)	132, 246, 381, 428, 753, 880, 888, 951, 1791
HpySE526I	ACGT	3 cut(s)	1200, 1204, 1555
Hsp92II	CATG	6 cut(s)	59, 598, 1235, 1569, 1773, 1939
Ksp22I	TGATCA	1 cut(s)	256
Kzo9I	GATC	8 cut(s)	256, 334, 934, 1309, 1585, 1596, 1662, 1713
LmnI	GCTCC	4 cut(s)	233, 436, 773, 1304
LweI	GCATC	5 cut(s)	26, 170, 245, 982, 1504
MabI	ACCWGGT	1 cut(s)	1291
MaeI	CTAG	5 cut(s)	291, 308, 833, 1236, 1535
MaeII	ACGT	3 cut(s)	1200, 1204, 1555
MaeIII	GTNAC	6 cut(s)	322, 676, 1091, 1528, 1681, 1738
MalI	GATC	8 cut(s)	258, 336, 936, 1311, 1587, 1598, 1664, 1715
MboI	GATC	8 cut(s)	256, 334, 934, 1309, 1585, 1596, 1662, 1713
MfeI	CAATTG	2 cut(s)	843, 1395
MflI	RGATCY	1 cut(s)	1309
MhlI	GDGCHC	4 cut(s)	267, 778, 1482, 1512
MlyI	GAGTC	5 cut(s)	491, 820, 936, 1136, 1495
MmeI	TCCRAC	3 cut(s)	751, 979, 1782
MroXI	GAANNNNTTC	1 cut(s)	1261
MseI	TTAA	6 cut(s)	516, 551, 743, 942, 1056, 1872
MslI	CAYNNNNRTG	1 cut(s)	674
MspA1I	CMGCKG	1 cut(s)	1697
MspI	CCGG	3 cut(s)	1980, 1993, 2035
MunI	CAATTG	2 cut(s)	843, 1395
Mva1269I	GAATGC	1 cut(s)	780
MvaI	CCWGG	8 cut(s)	423, 434, 606, 615, 813, 1161, 1293, 1506
MwoI	GCNNNNNNNGC	8 cut(s)	23, 242, 485, 773, 854, 1313, 1343, 2048
NciI	CCSGG	3 cut(s)	1981, 1994, 2036
NcoI	CCATGG	3 cut(s)	55, 1769, 1935
NdeI	CATATG	1 cut(s)	1894
NdeII	GATC	8 cut(s)	256, 334, 934, 1309, 1585, 1596, 1662, 1713
NheI	GCTAGC	2 cut(s)	832, 1235
NlaIII	CATG	6 cut(s)	59, 598, 1235, 1569, 1773, 1939
NlaIV	GGNNCC	5 cut(s)	265, 352, 392, 663, 2052
NmuCI	GTSAC	4 cut(s)	322, 676, 1528, 1681
OliI	CACNNNNGTG	1 cut(s)	674
PaqCI	CACCTGC	1 cut(s)	1168
PceI	AGGCCT	1 cut(s)	1159
PctI	GAATGC	1 cut(s)	780
PdmI	GAANNNNTTC	1 cut(s)	1261
PfeI	GAWTC	4 cut(s)	759, 1391, 1784, 1862
Pfl23II	CGTACG	1 cut(s)	1201
PflMI	CCANNNNNTGG	2 cut(s)	671, 818
PfoI	TCCNGGA	1 cut(s)	811
PleI	GAGTC	5 cut(s)	491, 820, 935, 1136, 1495
PmaCI	CACGTG	1 cut(s)	1556
PmlI	CACGTG	1 cut(s)	1556
PpsI	GAGTC	5 cut(s)	491, 820, 935, 1136, 1495
Ppu21I	YACGTR	2 cut(s)	1205, 1556
PpuMI	RGGWCCY	1 cut(s)	1954
Psp124BI	GAGCTC	1 cut(s)	778
Psp5II	RGGWCCY	1 cut(s)	1954
Psp6I	CCWGG	8 cut(s)	421, 432, 604, 613, 811, 1159, 1291, 1504
PspCI	CACGTG	1 cut(s)	1556
PspEI	GGTNACC	1 cut(s)	1738
PspFI	CCCAGC	1 cut(s)	695
PspGI	CCWGG	8 cut(s)	421, 432, 604, 613, 811, 1159, 1291, 1504
PspLI	CGTACG	1 cut(s)	1201
PspN4I	GGNNCC	5 cut(s)	265, 352, 392, 663, 2052
PspOMI	GGGCCC	1 cut(s)	263
PspPPI	RGGWCCY	1 cut(s)	1954
PstI	CTGCAG	1 cut(s)	1582
PstNI	CAGNNNCTG	3 cut(s)	818, 887, 2066
PsuI	RGATCY	1 cut(s)	1309
PvuII	CAGCTG	1 cut(s)	1697
RsaI	GTAC	3 cut(s)	61, 219, 1203
RsaNI	GTAC	3 cut(s)	60, 218, 1202
RseI	CAYNNNNRTG	1 cut(s)	674
SacI	GAGCTC	1 cut(s)	778
SaqAI	TTAA	6 cut(s)	516, 551, 743, 942, 1056, 1872
Sau3AI	GATC	8 cut(s)	256, 334, 934, 1309, 1585, 1596, 1662, 1713
SchI	GAGTC	5 cut(s)	491, 820, 936, 1136, 1495
SduI	GDGCHC	4 cut(s)	267, 778, 1482, 1512
SexAI	ACCWGGT	1 cut(s)	1291
SfaNI	GCATC	5 cut(s)	26, 170, 245, 982, 1504
SfcI	CTRYAG	1 cut(s)	1578
SinI	GGWCC	4 cut(s)	169, 351, 602, 1954
SmiMI	CAYNNNNRTG	1 cut(s)	674
SmlI	CTYRAG	3 cut(s)	489, 574, 1961
SmoI	CTYRAG	3 cut(s)	489, 574, 1961
SseBI	AGGCCT	1 cut(s)	1159
SsiI	CCGC	3 cut(s)	476, 600, 2048
SspMI	CTAG	5 cut(s)	291, 308, 833, 1236, 1535
SstI	GAGCTC	1 cut(s)	778
StuI	AGGCCT	1 cut(s)	1159
StyI	CCWWGG	3 cut(s)	55, 1769, 1935
TaaI	ACNGT	2 cut(s)	1429, 1928
TaiI	ACGT	3 cut(s)	1203, 1207, 1558
TaqI	TCGA	4 cut(s)	239, 468, 1140, 2028
TauI	GCSGC	2 cut(s)	479, 2051
TfiI	GAWTC	4 cut(s)	759, 1391, 1784, 1862
Tru1I	TTAA	6 cut(s)	516, 551, 743, 942, 1056, 1872
Tru9I	TTAA	6 cut(s)	516, 551, 743, 942, 1056, 1872
TscAI	CASTG	5 cut(s)	676, 769, 1102, 1723, 2020
TseFI	GTSAC	4 cut(s)	322, 676, 1528, 1681
Tsp45I	GTSAC	4 cut(s)	322, 676, 1528, 1681
TspGWI	ACGGA	2 cut(s)	292, 920
TspRI	CASTG	5 cut(s)	676, 769, 1102, 1723, 2020
Van91I	CCANNNNNTGG	2 cut(s)	671, 818
VpaK11BI	GGWCC	4 cut(s)	169, 351, 602, 1954
XagI	CCTNNNNNAGG	2 cut(s)	384, 1153
XapI	RAATTY	3 cut(s)	529, 1988, 2009
XbaI	TCTAGA	1 cut(s)	307
XcmI	CCANNNNNNNNNTGG	1 cut(s)	655
XmnI	GAANNNNTTC	1 cut(s)	1261
XspI	CTAG	5 cut(s)	291, 308, 833, 1236, 1535

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.