Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0005588

Physical Location & Seq

Genomic Coordinates Reverse (-)

44907731 .. 44911898

Gene Structure 4168 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G028140.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2097 bp

ATGAAATCAATTTTCCTAGAAAATTTGACCAAAATGGCAGCATCATCAGCTTGCCTTGTGGGGAATGGTTTATCTACCCATGGTACTAAACCAAGTTTGAGCAAGGATTTCTGTGGGAGACCTCTCTTCCACTCTTCAACTCTTCCATCGTTGGCTAAGGGGACAAAAGCAGTTCTTGTAAAGGCATCATTGGACCAAAAGCAATATGAAGGAAGAAGAGGGTTTATGAAGTTGCTTGGAGTACCTGCTTTACTTGGAGCAGCGAGTGCTAAGGCCGATGATCAAGGGCCCTCTTCTTCACGGATGTCTTATTCTAGGTTCTTGGAGTATCTAGACAAGGACAGGGTGACAAAAGTTGATCTTTTTGAGAACGGGACCATAGCTATTGTTGAGGCTATCTCTCCTGAGTTAGGGAACCGATTGCAGCGAGTTCGTGTGCAACTCCCAGGACTAAGCCAGGAGCTTCTTCAAAAGTTCAGGGAAAAGAACATCGACTTTGCAGCACATAATGCTCAAGAAGACTCGGGCAACCTTTTATTTAACCTGATTGGAAATTTGGCTTTCCCACTAATTTTAATTGGGGGCTTGTTCTTACTCTCAAGGCGTTCAGGTGGAGGCATGGGCGGTCCTGGTGGGCCTGGGTTTCCCCTCTCCTTTGGTCAGTCTAAAGCCAAGTTCCAAATGGAACCAAATACTGGAGTGACATTTGATGATGTTGCTGGGGTGGATGAAGCCAAGCAGGATTTTGTAGAGGTGGTGGAGTTCTTAAAGAAGCCTGAGAGATTCACTGCTGTTGGAGCTCGCATTCCTAAAGGTGTTCTTCTTGTCGGCCCTCCAGGAACTGGAAAGACTCTGCTAGCAAAGGCAATTGCTGGCGAAGCTGGTGTTCCTTTTTTCTCCATCTCAGGTTCTGAGTTTGTTGAAATGTTCGTTGGTGTTGGTGCTTCCCGAGTCCGTGATCTTTTTAAGAAGGCTAAGGAAAATGCACCTTGCATTGTATTTGTTGATGAAATTGATGCTGTTGGACGGCAAAGAGGAACTGGAATTGGTGGAGGCAATGATGAAAGAGAACAGACCCTTAATCAGCTTTTGACAGAAATGGATGGTTTTGAGGGTAACACTGGTATCATTGTGGTTGCAGCAACTAACAGGGCAGATATTCTCGACTCTGCCTTGTTGAGGCCTGGTCGGTTTGACAGGCAGGTGTCTGTTGATGTTCCAGACGTACGTGGCAGAACAGATATCTTGAAGGTTCATGCTAGCAATAAGAAGTTTGAGGGAAATGTTTCCCTTGATGTTGTAGCTATGAGGACACCTGGTTTTAGTGGAGCAGATCTTGCCAACCTCCTAAATGAAGCAGCTATATTGGCTGGTCGGCGTGGGAAGTCGGCAATTTCATCTAAAGAGATTGATGATTCAATTGATAGAATAGTGGCTGGAATGGAAGGAACAGTAATGACAGACGGAAAGAGCAAAAGTCTGGTAGCATACCACGAAGTTGGGCACGCCATCTGTGGGACATTGACTCCAGGGCACGATGCTGTTCAGAAAGTGACCCTAGTTCCACGAGGTCAAGCACGTGGTCTTACATGGTTCATTCCTGCAGATGATCCTACCTTGATCTCCAAGCAGCAACTATTTGCAAGAATTGTTGGTGGGCTTGGTGGTAGAGCAGCAGAGGAAGTGATCTTTGGTGAGCCAGAGGTGACAACAGGTGCAGCTGGTGATTTGCAGCAGATCACTGGTTTAGCCAAACAGATGGTAACCACATTTGGAATGTCCGACATTGGCCCATGGTCATTGATGGATTCAGCTCAGAGTGGTGATGTCATAATGAGAATGATGGCAAGGAACTCAATGTCAGAAAAGCTTGCTGAAGACATTGATTCTGCTATTAAGAGATTATCTGATGAAGCATATGAGATTGCATTGAGCCACATAAGAAACAACCGTGAAGCCATGGACAAGATAGTGGAGGTCCTTCTTGAGAAGGAAACAATGACCGGGGATGAATTCCGGGCAATCCTCTCTGAATTCACTGAAATCCCAGTCGAAAACCGGGTTGCTGCTGCGGCCCCTACTCCAGTCGCTGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006091 GO:0006508 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009056 GO:0009057 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009628 GO:0009642 GO:0009644 GO:0009657 GO:0009658 GO:0009668 GO:0009719 GO:0009725 GO:0009735 GO:0009765 GO:0009892 GO:0009941 GO:0009987 GO:0010027 GO:0010033 GO:0010109 GO:0010205 GO:0010206 GO:0010304 GO:0015979 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019222 GO:0019538 GO:0019684 GO:0022607 GO:0030091 GO:0030163 GO:0031323 GO:0031324 GO:0031967 GO:0031975 GO:0031976 GO:0031977 GO:0031984 GO:0034357 GO:0034622 GO:0042221 GO:0042548 GO:0042623 GO:0042651 GO:0043155 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043467 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0048519 GO:0048523 GO:0048564 GO:0050789 GO:0050794 GO:0050896 GO:0055035 GO:0061024 GO:0065003 GO:0065007 GO:0070011 GO:0071704 GO:0071840 GO:0072593 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1905156

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA FtsH_ext Peptidase_M41

Protein Analysis

698

Amino Acids

74.61

Weight (kDa)

5.84

Isoelectric Point (pI)

31.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FtsH_ext	PF06480	85 - 168	1.4e-07	FtsH Extracellular
AAA	PF00004	273 - 405	4.1e-46	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	428 - 471	1.6e-12	AAA+ lid domain
Peptidase_M41	PF01434	487 - 675	8e-68	Peptidase family M41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005588)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06430 AT1G06430 AT1G06430 AT2G30950 AT2G30950 AT2G30950 AT2G30950
fragaria_vesca	FvH4_6g27780 FvH4_6g27780 FvH4_6g27780
malus_domestica	MD09G1234500.v1.1 MD17G1263600.v1.1
prunus_persica	Prupe.3G112700_v2.0.a1 Prupe.3G112700_v2.0.a1
pyrus_communis	pycom09g15280 pycom17g26380
rosa_chinensis	RchiOBHm_Chr2g0131061
rosa_roxburghii	Rroxscaffold_2G00113260
rosa_samantha	Rh2AG347000 Rh2AG479700 Rh2BG354500 Rh2BG461700 Rh2CG333000 Rh2DG372500 Rh2DG470900
rosa_wichuraiana	Rw2G028140 Rw2G028180 Rw4G004930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1192
Acc36I	ACCTGC	2 cut(s)	253, 1192
AccB7I	CCANNNNNTGG	2 cut(s)	695, 842
AciI	CCGC	2 cut(s)	624, 2072
AclWI	GGATC	1 cut(s)	1604
AcsI	RAATTY	4 cut(s)	22, 553, 2012, 2033
AcuI	CTGAAG	1 cut(s)	1896
AcvI	CACGTG	1 cut(s)	1580
AfaI	GTAC	3 cut(s)	85, 243, 1227
AfiI	CCNNNNNNNGG	5 cut(s)	410, 695, 842, 1179, 1515
AgsI	TTSAA	5 cut(s)	138, 470, 923, 1249, 1419
AjnI	CCWGG	8 cut(s)	445, 456, 628, 637, 835, 1183, 1315, 1528
AjuI	GAANNNNNNNTTGG	4 cut(s)	915, 947, 1674, 1706
Alw21I	GWGCWC	1 cut(s)	802
Alw26I	GTCTC	1 cut(s)	112
AlwI	GGATC	1 cut(s)	1604
AlwNI	CAGNNNCTG	3 cut(s)	842, 911, 2090
Ama87I	CYCGRG	2 cut(s)	523, 948
AoxI	GGCC	7 cut(s)	273, 287, 635, 829, 1181, 1789, 2073
ApaI	GGGCCC	1 cut(s)	291
ApoI	RAATTY	4 cut(s)	22, 553, 2012, 2033
Asp700I	GAANNNNTTC	1 cut(s)	1285
AsuC2I	CCSGG	3 cut(s)	2005, 2018, 2060
AsuHPI	GGTGA	5 cut(s)	358, 1706, 1717, 1736, 1835
AsuNHI	GCTAGC	2 cut(s)	856, 1259
AvaI	CYCGRG	2 cut(s)	523, 948
AvaII	GGWCC	4 cut(s)	193, 375, 626, 1978
BaeGI	GKGCMC	3 cut(s)	291, 1506, 1536
BaeI	ACNNNNGTAYC	2 cut(s)	1108, 1141
BanII	GRGCYC	2 cut(s)	291, 802
BauI	CACGAG	1 cut(s)	1566
BbrPI	CACGTG	1 cut(s)	1580
BbsI	GAAGAC	2 cut(s)	525, 1884
Bbv12I	GWGCWC	1 cut(s)	802
BccI	CCATC	7 cut(s)	154, 908, 1097, 1517, 1753, 1798, 1837
BceAI	ACGGC	1 cut(s)	1043
BcgI	CGANNNNNNTGC	2 cut(s)	413, 447
BciT130I	CCWGG	8 cut(s)	447, 458, 630, 639, 837, 1185, 1317, 1530
BclI	TGATCA	1 cut(s)	280
BcnI	CCSGG	3 cut(s)	2005, 2018, 2060
BcoDI	GTCTC	1 cut(s)	112
BfaI	CTAG	6 cut(s)	17, 315, 332, 857, 1260, 1559
BfmI	CTRYAG	1 cut(s)	1602
BfuAI	ACCTGC	2 cut(s)	253, 1192
BglII	AGATCT	1 cut(s)	1333
Bme18I	GGWCC	4 cut(s)	193, 375, 626, 1978
BmeT110I	CYCGRG	2 cut(s)	523, 948
BmiI	GGNNCC	5 cut(s)	289, 376, 416, 687, 2076
BmrI	ACTGGG	1 cut(s)	2042
BmsI	GCATC	4 cut(s)	50, 194, 1006, 1528
BmtI	GCTAGC	2 cut(s)	860, 1263
BmuI	ACTGGG	1 cut(s)	2042
BpiI	GAAGAC	2 cut(s)	525, 1884
BplI	GAGNNNNNCTC	2 cut(s)	383, 415
BpmI	CTGGAG	4 cut(s)	717, 819, 1512, 2067
Bpu10I	CCTNAGC	3 cut(s)	156, 270, 975
BpuEI	CTTGAG	3 cut(s)	498, 583, 2006
BpuMI	CCSGG	3 cut(s)	2005, 2018, 2060
BsaAI	YACGTR	2 cut(s)	1229, 1580
BsaI	GGTCTC	1 cut(s)	112
BsaJI	CCNNGG	7 cut(s)	79, 445, 638, 1529, 1793, 1959, 2004
BsaXI	ACNNNNNCTCC	2 cut(s)	1510, 1540
Bsc4I	CCNNNNNNNGG	5 cut(s)	410, 695, 842, 1179, 1515
Bse1I	ACTGG	7 cut(s)	700, 847, 1045, 1126, 1747, 2048, 2084
Bse3DI	GCAATG	1 cut(s)	1063
BseBI	CCWGG	8 cut(s)	447, 458, 630, 639, 837, 1185, 1317, 1530
BseDI	CCNNGG	7 cut(s)	79, 445, 638, 1529, 1793, 1959, 2004
BseGI	GGATG	4 cut(s)	309, 733, 1108, 2014
BseLI	CCNNNNNNNGG	5 cut(s)	410, 695, 842, 1179, 1515
BseMI	GCAATG	1 cut(s)	1063
BseMII	CTCAG	5 cut(s)	396, 768, 903, 918, 1829
BseNI	ACTGG	7 cut(s)	700, 847, 1045, 1126, 1747, 2048, 2084
BseSI	GKGCMC	3 cut(s)	291, 1506, 1536
BseYI	CCCAGC	1 cut(s)	719
BsgI	GTGCAG	1 cut(s)	1737
BshFI	GGCC	7 cut(s)	275, 289, 637, 831, 1183, 1791, 2075
BsiHKAI	GWGCWC	1 cut(s)	802
BsiHKCI	CYCGRG	2 cut(s)	523, 948
BsiSI	CCGG	3 cut(s)	2004, 2017, 2059
BsiWI	CGTACG	1 cut(s)	1225
BslFI	GGGAC	3 cut(s)	175, 388, 1531
BslI	CCNNNNNNNGG	5 cut(s)	410, 695, 842, 1179, 1515
BsmAI	GTCTC	1 cut(s)	112
BsmFI	GGGAC	3 cut(s)	175, 388, 1531
BsmI	GAATGC	1 cut(s)	804
BsnI	GGCC	7 cut(s)	275, 289, 637, 831, 1183, 1791, 2075
Bso31I	GGTCTC	1 cut(s)	112
BsoBI	CYCGRG	2 cut(s)	523, 948
Bsp120I	GGGCCC	1 cut(s)	287
Bsp1286I	GDGCHC	4 cut(s)	291, 802, 1506, 1536
Bsp143I	GATC	8 cut(s)	280, 358, 958, 1333, 1609, 1620, 1686, 1737
Bsp19I	CCATGG	3 cut(s)	79, 1793, 1959
BspACI	CCGC	2 cut(s)	624, 2072
BspANI	GGCC	7 cut(s)	275, 289, 637, 831, 1183, 1791, 2075
BspCNI	CTCAG	5 cut(s)	397, 769, 904, 917, 1828
BspLI	GGNNCC	5 cut(s)	289, 376, 416, 687, 2076
BspMAI	CTGCAG	1 cut(s)	1606
BspMI	ACCTGC	2 cut(s)	253, 1192
BspOI	GCTAGC	2 cut(s)	860, 1263
BspPI	GGATC	1 cut(s)	1604
BspTNI	GGTCTC	1 cut(s)	112
BsrDI	GCAATG	1 cut(s)	1063
BsrI	ACTGG	7 cut(s)	700, 847, 1045, 1126, 1747, 2048, 2084
BssECI	CCNNGG	7 cut(s)	79, 445, 638, 1529, 1793, 1959, 2004
BssMI	GATC	8 cut(s)	280, 358, 958, 1333, 1609, 1620, 1686, 1737
BssSI	CACGAG	1 cut(s)	1566
BssT1I	CCWWGG	3 cut(s)	79, 1793, 1959
Bst2BI	CACGAG	1 cut(s)	1566
Bst2UI	CCWGG	8 cut(s)	447, 458, 630, 639, 837, 1185, 1317, 1530
Bst4CI	ACNGT	2 cut(s)	1453, 1952
Bst6I	CTCTTC	5 cut(s)	131, 139, 147, 211, 298
BstAPI	GCANNNNNTGC	3 cut(s)	266, 509, 1337
BstBAI	YACGTR	2 cut(s)	1229, 1580
BstC8I	GCNNGC	7 cut(s)	52, 802, 858, 874, 1261, 1506, 1872
BstDEI	CTNAG	9 cut(s)	156, 270, 405, 452, 777, 904, 912, 975, 1815
BstDSI	CCRYGG	3 cut(s)	79, 1793, 1959
BstEII	GGTNACC	1 cut(s)	1762
BstENI	CCTNNNNNAGG	2 cut(s)	408, 1177
BstF5I	GGATG	4 cut(s)	309, 733, 1108, 2014
BstKTI	GATC	8 cut(s)	283, 361, 961, 1336, 1612, 1623, 1689, 1740
BstMAI	GTCTC	1 cut(s)	112
BstMBI	GATC	8 cut(s)	280, 358, 958, 1333, 1609, 1620, 1686, 1737
BstMWI	GCNNNNNNNGC	8 cut(s)	47, 266, 509, 797, 878, 1337, 1367, 2072
BstNI	CCWGG	8 cut(s)	447, 458, 630, 639, 837, 1185, 1317, 1530
BstPI	GGTNACC	1 cut(s)	1762
BstSFI	CTRYAG	1 cut(s)	1602
BstSLI	GKGCMC	3 cut(s)	291, 1506, 1536
BstV2I	GAAGAC	2 cut(s)	525, 1884
BstX2I	RGATCY	1 cut(s)	1333
BstXI	CCANNNNNNTGG	2 cut(s)	1499, 1759
BstYI	RGATCY	1 cut(s)	1333
BsuRI	GGCC	7 cut(s)	275, 289, 637, 831, 1183, 1791, 2075
BtgI	CCRYGG	3 cut(s)	79, 1793, 1959
BtsCI	GGATG	4 cut(s)	309, 733, 1108, 2014
BtsI	GCAGTG	1 cut(s)	786
BtsIMutI	CAGTG	4 cut(s)	786, 1119, 1740, 2037
BveI	ACCTGC	2 cut(s)	253, 1192
Cac8I	GCNNGC	7 cut(s)	52, 802, 858, 874, 1261, 1506, 1872
CaiI	CAGNNNCTG	3 cut(s)	842, 911, 2090
CsiI	ACCWGGT	1 cut(s)	1315
Csp6I	GTAC	3 cut(s)	84, 242, 1226
CviAII	CATG	6 cut(s)	80, 619, 1256, 1590, 1794, 1960
CviQI	GTAC	3 cut(s)	84, 242, 1226
DdeI	CTNAG	9 cut(s)	156, 270, 405, 452, 777, 904, 912, 975, 1815
DpnI	GATC	8 cut(s)	282, 360, 960, 1335, 1611, 1622, 1688, 1739
DpnII	GATC	8 cut(s)	280, 358, 958, 1333, 1609, 1620, 1686, 1737
Eam1104I	CTCTTC	5 cut(s)	131, 139, 147, 211, 298
EarI	CTCTTC	5 cut(s)	131, 139, 147, 211, 298
Ecl136II	GAGCTC	1 cut(s)	800
Eco130I	CCWWGG	3 cut(s)	79, 1793, 1959
Eco147I	AGGCCT	1 cut(s)	1183
Eco24I	GRGCYC	2 cut(s)	291, 802
Eco31I	GGTCTC	1 cut(s)	112
Eco32I	GATATC	1 cut(s)	1243
Eco47I	GGWCC	4 cut(s)	193, 375, 626, 1978
Eco53kI	GAGCTC	1 cut(s)	800
Eco57I	CTGAAG	1 cut(s)	1896
Eco72I	CACGTG	1 cut(s)	1580
Eco88I	CYCGRG	2 cut(s)	523, 948
Eco91I	GGTNACC	1 cut(s)	1762
EcoICRI	GAGCTC	1 cut(s)	800
EcoNI	CCTNNNNNAGG	2 cut(s)	408, 1177
EcoO109I	RGGNCCY	3 cut(s)	287, 288, 1978
EcoO65I	GGTNACC	1 cut(s)	1762
EcoRI	GAATTC	2 cut(s)	2012, 2033
EcoRII	CCWGG	8 cut(s)	445, 456, 628, 637, 835, 1183, 1315, 1528
EcoRV	GATATC	1 cut(s)	1243
EcoT14I	CCWWGG	3 cut(s)	79, 1793, 1959
EcoT38I	GRGCYC	2 cut(s)	291, 802
ErhI	CCWWGG	3 cut(s)	79, 1793, 1959
FaeI	CATG	6 cut(s)	83, 622, 1259, 1593, 1797, 1963
FalI	AAGNNNNNCTT	6 cut(s)	159, 191, 345, 377, 804, 836
FaqI	GGGAC	3 cut(s)	175, 388, 1531
FatI	CATG	6 cut(s)	79, 618, 1255, 1589, 1793, 1959
FauNDI	CATATG	1 cut(s)	1918
FbaI	TGATCA	1 cut(s)	280
FokI	GGATG	4 cut(s)	316, 740, 1115, 2021
FriOI	GRGCYC	2 cut(s)	291, 802
FspBI	CTAG	6 cut(s)	17, 315, 332, 857, 1260, 1559
GsaI	CCCAGC	1 cut(s)	723
GsuI	CTGGAG	4 cut(s)	717, 819, 1512, 2067
HaeIII	GGCC	7 cut(s)	275, 289, 637, 831, 1183, 1791, 2075
HapII	CCGG	3 cut(s)	2004, 2017, 2059
Hin1II	CATG	6 cut(s)	83, 622, 1259, 1593, 1797, 1963
HindIII	AAGCTT	1 cut(s)	1868
HinfI	GANTC	9 cut(s)	521, 783, 850, 951, 1166, 1415, 1525, 1808, 1886
HpaII	CCGG	3 cut(s)	2004, 2017, 2059
HphI	GGTGA	5 cut(s)	358, 1706, 1717, 1736, 1835
Hpy188I	TCNGA	7 cut(s)	913, 1548, 1783, 1818, 1864, 1909, 2032
Hpy188III	TCNNGA	8 cut(s)	332, 404, 515, 948, 1163, 1220, 1246, 1985
HpyAV	CCTTC	6 cut(s)	203, 964, 1243, 1439, 1984, 1991
HpyCH4III	ACNGT	2 cut(s)	1453, 1952
HpyCH4IV	ACGT	3 cut(s)	1224, 1228, 1579
HpyF10VI	GCNNNNNNNGC	8 cut(s)	47, 266, 509, 797, 878, 1337, 1367, 2072
HpyF3I	CTNAG	9 cut(s)	156, 270, 405, 452, 777, 904, 912, 975, 1815
HpySE526I	ACGT	3 cut(s)	1224, 1228, 1579
Hsp92II	CATG	6 cut(s)	83, 622, 1259, 1593, 1797, 1963
Ksp22I	TGATCA	1 cut(s)	280
Kzo9I	GATC	8 cut(s)	280, 358, 958, 1333, 1609, 1620, 1686, 1737
LmnI	GCTCC	4 cut(s)	257, 460, 797, 1328
LweI	GCATC	4 cut(s)	50, 194, 1006, 1528
MabI	ACCWGGT	1 cut(s)	1315
MaeI	CTAG	6 cut(s)	17, 315, 332, 857, 1260, 1559
MaeII	ACGT	3 cut(s)	1224, 1228, 1579
MaeIII	GTNAC	6 cut(s)	346, 700, 1115, 1552, 1705, 1762
MalI	GATC	8 cut(s)	282, 360, 960, 1335, 1611, 1622, 1688, 1739
MboI	GATC	8 cut(s)	280, 358, 958, 1333, 1609, 1620, 1686, 1737
MfeI	CAATTG	2 cut(s)	867, 1419
MflI	RGATCY	1 cut(s)	1333
MhlI	GDGCHC	4 cut(s)	291, 802, 1506, 1536
MlyI	GAGTC	5 cut(s)	515, 844, 960, 1160, 1519
MmeI	TCCRAC	3 cut(s)	775, 1003, 1806
MroXI	GAANNNNTTC	1 cut(s)	1285
MseI	TTAA	6 cut(s)	540, 575, 767, 966, 1080, 1896
MspA1I	CMGCKG	1 cut(s)	1721
MspI	CCGG	3 cut(s)	2004, 2017, 2059
MunI	CAATTG	2 cut(s)	867, 1419
Mva1269I	GAATGC	1 cut(s)	804
MvaI	CCWGG	8 cut(s)	447, 458, 630, 639, 837, 1185, 1317, 1530
MwoI	GCNNNNNNNGC	8 cut(s)	47, 266, 509, 797, 878, 1337, 1367, 2072
NciI	CCSGG	3 cut(s)	2005, 2018, 2060
NcoI	CCATGG	3 cut(s)	79, 1793, 1959
NdeI	CATATG	1 cut(s)	1918
NdeII	GATC	8 cut(s)	280, 358, 958, 1333, 1609, 1620, 1686, 1737
NheI	GCTAGC	2 cut(s)	856, 1259
NlaIII	CATG	6 cut(s)	83, 622, 1259, 1593, 1797, 1963
NlaIV	GGNNCC	5 cut(s)	289, 376, 416, 687, 2076
NmuCI	GTSAC	4 cut(s)	346, 700, 1552, 1705
PaqCI	CACCTGC	1 cut(s)	1192
PceI	AGGCCT	1 cut(s)	1183
PctI	GAATGC	1 cut(s)	804
PdmI	GAANNNNTTC	1 cut(s)	1285
PfeI	GAWTC	4 cut(s)	783, 1415, 1808, 1886
Pfl23II	CGTACG	1 cut(s)	1225
PflMI	CCANNNNNTGG	2 cut(s)	695, 842
PfoI	TCCNGGA	1 cut(s)	835
PleI	GAGTC	5 cut(s)	515, 844, 959, 1160, 1519
PmaCI	CACGTG	1 cut(s)	1580
PmlI	CACGTG	1 cut(s)	1580
PpsI	GAGTC	5 cut(s)	515, 844, 959, 1160, 1519
Ppu21I	YACGTR	2 cut(s)	1229, 1580
PpuMI	RGGWCCY	1 cut(s)	1978
Psp124BI	GAGCTC	1 cut(s)	802
Psp5II	RGGWCCY	1 cut(s)	1978
Psp6I	CCWGG	8 cut(s)	445, 456, 628, 637, 835, 1183, 1315, 1528
PspCI	CACGTG	1 cut(s)	1580
PspEI	GGTNACC	1 cut(s)	1762
PspFI	CCCAGC	1 cut(s)	719
PspGI	CCWGG	8 cut(s)	445, 456, 628, 637, 835, 1183, 1315, 1528
PspLI	CGTACG	1 cut(s)	1225
PspN4I	GGNNCC	5 cut(s)	289, 376, 416, 687, 2076
PspOMI	GGGCCC	1 cut(s)	287
PspPPI	RGGWCCY	1 cut(s)	1978
PstI	CTGCAG	1 cut(s)	1606
PstNI	CAGNNNCTG	3 cut(s)	842, 911, 2090
PsuI	RGATCY	1 cut(s)	1333
PvuII	CAGCTG	1 cut(s)	1721
RsaI	GTAC	3 cut(s)	85, 243, 1227
RsaNI	GTAC	3 cut(s)	84, 242, 1226
SacI	GAGCTC	1 cut(s)	802
SaqAI	TTAA	6 cut(s)	540, 575, 767, 966, 1080, 1896
Sau3AI	GATC	8 cut(s)	280, 358, 958, 1333, 1609, 1620, 1686, 1737
SchI	GAGTC	5 cut(s)	515, 844, 960, 1160, 1519
SduI	GDGCHC	4 cut(s)	291, 802, 1506, 1536
SexAI	ACCWGGT	1 cut(s)	1315
SfaNI	GCATC	4 cut(s)	50, 194, 1006, 1528
SfcI	CTRYAG	1 cut(s)	1602
SinI	GGWCC	4 cut(s)	193, 375, 626, 1978
SmlI	CTYRAG	3 cut(s)	513, 598, 1985
SmoI	CTYRAG	3 cut(s)	513, 598, 1985
SseBI	AGGCCT	1 cut(s)	1183
SsiI	CCGC	2 cut(s)	624, 2072
SspMI	CTAG	6 cut(s)	17, 315, 332, 857, 1260, 1559
SstI	GAGCTC	1 cut(s)	802
StuI	AGGCCT	1 cut(s)	1183
StyI	CCWWGG	3 cut(s)	79, 1793, 1959
TaaI	ACNGT	2 cut(s)	1453, 1952
TaiI	ACGT	3 cut(s)	1227, 1231, 1582
TaqI	TCGA	3 cut(s)	492, 1164, 2052
TauI	GCSGC	1 cut(s)	2075
TfiI	GAWTC	4 cut(s)	783, 1415, 1808, 1886
Tru1I	TTAA	6 cut(s)	540, 575, 767, 966, 1080, 1896
Tru9I	TTAA	6 cut(s)	540, 575, 767, 966, 1080, 1896
TscAI	CASTG	4 cut(s)	793, 1126, 1747, 2044
TseFI	GTSAC	4 cut(s)	346, 700, 1552, 1705
Tsp45I	GTSAC	4 cut(s)	346, 700, 1552, 1705
TspGWI	ACGGA	3 cut(s)	316, 944, 1479
TspRI	CASTG	4 cut(s)	793, 1126, 1747, 2044
Van91I	CCANNNNNTGG	2 cut(s)	695, 842
VpaK11BI	GGWCC	4 cut(s)	193, 375, 626, 1978
XagI	CCTNNNNNAGG	2 cut(s)	408, 1177
XapI	RAATTY	4 cut(s)	22, 553, 2012, 2033
XbaI	TCTAGA	1 cut(s)	331
XcmI	CCANNNNNNNNNTGG	1 cut(s)	679
XmnI	GAANNNNTTC	1 cut(s)	1285
XspI	CTAG	6 cut(s)	17, 315, 332, 857, 1260, 1559

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.