AT1G07645
ERF Family

Dessication-induced 1VOC superfamily protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
2367437 .. 2368436
1000 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G07645.1

Sequence Viewer

Length: 414 bp
ATGGCAGCTAATATGATGAGACCGGCGTTTGCTTACACTGTTGTGTACGTGAAGGACGTAGCTAAATCTGTAGAATTCTACTCTAGAGCTTTTGGTCACAACGTCCGTCGTCTTGACGAATCCCACAGGTGGGGGGAGCTAGAGAGCGGGCAAACCACGATAGCGTTCACACCGCTTCACCAGCATGAGACCGACGACCTAACCGGGAAGGTTCAGGCTACGCAGTCAGCACGTGAAAGAGCACCCATCGAAGTCTGCTTCTGTTACCCTGATGTTGATGCCGCTTTCAAGAGAGCGGTGGAGAACGGTGCGGAGGCAGTGAGCAAGCCGGAAGATAAAGAATGGGGGCAGAAGGTTGGATACGTGCGAGACATTGACGGCATTGTTGTACGCATCGGAAGCCACGTTAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

137

Amino Acids

15.39

Weight (kDa)

6.2

Isoelectric Point (pI)

27.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyoxalase PF00903 10 - 131 2e-12 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase_2 PF12681 10 - 135 2.5e-10 Glyoxalase-like domain
Glyoxalase_6 PF18029 14 - 127 3.6e-09 Glyoxalase-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0013486)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 2 cut(s) 147, 296
AciI CCGC 5 cut(s) 147, 173, 282, 296, 311
AcsI RAATTY 1 cut(s) 74
AcvI CACGTG 1 cut(s) 233
AfaI GTAC 2 cut(s) 47, 390
AfiI CCNNNNNNNGG 2 cut(s) 129, 130
AgsI TTSAA 1 cut(s) 289
AleI CACNNNNGTG 1 cut(s) 41
AluBI AGCT 4 cut(s) 8, 62, 89, 139
AluI AGCT 4 cut(s) 8, 62, 89, 139
Alw21I GWGCWC 1 cut(s) 244
Alw26I GTCTC 3 cut(s) 13, 182, 363
ApeKI GCWGC 1 cut(s) 5
ApoI RAATTY 1 cut(s) 74
AsuC2I CCSGG 1 cut(s) 205
AsuHPI GGTGA 1 cut(s) 170
BarI GAAGNNNNNNTAC 2 cut(s) 344, 376
BbrPI CACGTG 1 cut(s) 233
Bbv12I GWGCWC 1 cut(s) 244
BbvI GCAGC 1 cut(s) 17
BccI CCATC 1 cut(s) 254
BceAI ACGGC 1 cut(s) 394
BciVI GTATCC 1 cut(s) 353
BcnI CCSGG 1 cut(s) 205
BcoDI GTCTC 3 cut(s) 13, 182, 363
BfaI CTAG 2 cut(s) 84, 140
BfmI CTRYAG 1 cut(s) 69
BfuI GTATCC 1 cut(s) 353
BisI GCNGC 2 cut(s) 6, 282
BlsI GCNGC 2 cut(s) 7, 283
Bme1390I CCNGG 1 cut(s) 205
BmrFI CCNGG 1 cut(s) 205
BmsI GCATC 2 cut(s) 268, 402
BpuMI CCSGG 1 cut(s) 205
BsaAI YACGTR 3 cut(s) 49, 233, 364
BsaI GGTCTC 2 cut(s) 13, 182
Bsc4I CCNNNNNNNGG 2 cut(s) 129, 130
Bse118I RCCGGY 1 cut(s) 22
BseLI CCNNNNNNNGG 2 cut(s) 129, 130
BseXI GCAGC 1 cut(s) 17
BsiHKAI GWGCWC 1 cut(s) 244
BsiSI CCGG 3 cut(s) 23, 204, 329
BslI CCNNNNNNNGG 2 cut(s) 129, 130
BsmAI GTCTC 3 cut(s) 13, 182, 363
Bso31I GGTCTC 2 cut(s) 13, 182
Bsp1286I GDGCHC 1 cut(s) 244
BspACI CCGC 5 cut(s) 147, 173, 282, 296, 311
BspTNI GGTCTC 2 cut(s) 13, 182
BsrBI CCGCTC 2 cut(s) 147, 296
BsrFI RCCGGY 1 cut(s) 22
BssAI RCCGGY 1 cut(s) 22
Bst4CI ACNGT 2 cut(s) 40, 308
BstBAI YACGTR 3 cut(s) 49, 233, 364
BstC8I GCNNGC 2 cut(s) 149, 326
BstMAI GTCTC 3 cut(s) 13, 182, 363
BstMWI GCNNNNNNNGC 2 cut(s) 181, 399
BstSCI CCNGG 1 cut(s) 203
BstSFI CTRYAG 1 cut(s) 69
BstV1I GCAGC 1 cut(s) 17
BsuI GTATCC 1 cut(s) 353
BtsI GCAGTG 1 cut(s) 324
BtsIMutI CAGTG 2 cut(s) 36, 324
Cac8I GCNNGC 2 cut(s) 149, 326
Cfr10I RCCGGY 1 cut(s) 22
Csp6I GTAC 2 cut(s) 46, 389
CviAII CATG 1 cut(s) 185
CviJI RGCY 7 cut(s) 8, 62, 89, 139, 218, 328, 402
CviKI_1 RGCY 7 cut(s) 8, 62, 89, 139, 218, 328, 402
CviQI GTAC 2 cut(s) 46, 389
Eco31I GGTCTC 2 cut(s) 13, 182
Eco72I CACGTG 1 cut(s) 233
EcoRI GAATTC 1 cut(s) 74
FaeI CATG 1 cut(s) 188
FaiI YATR 2 cut(s) 14, 186
FatI CATG 1 cut(s) 184
FauI CCCGC 1 cut(s) 140
Fnu4HI GCNGC 2 cut(s) 6, 282
Fsp4HI GCNGC 2 cut(s) 6, 282
FspBI CTAG 2 cut(s) 84, 140
GluI GCNGC 2 cut(s) 6, 282
HapII CCGG 3 cut(s) 23, 204, 329
Hin1II CATG 1 cut(s) 188
HinfI GANTC 1 cut(s) 119
HpaII CCGG 3 cut(s) 23, 204, 329
HphI GGTGA 1 cut(s) 170
Hpy166II GTNNAC 2 cut(s) 46, 168
Hpy188I TCNGA 1 cut(s) 398
Hpy188III TCNNGA 3 cut(s) 84, 113, 289
Hpy8I GTNNAC 2 cut(s) 46, 168
Hpy99I CGWCG 2 cut(s) 111, 197
HpyAV CCTTC 3 cut(s) 46, 202, 346
HpyCH4III ACNGT 2 cut(s) 40, 308
HpyCH4IV ACGT 6 cut(s) 48, 57, 102, 232, 363, 405
HpyF10VI GCNNNNNNNGC 2 cut(s) 181, 399
HpySE526I ACGT 6 cut(s) 48, 57, 102, 232, 363, 405
Hsp92II CATG 1 cut(s) 188
LmnI GCTCC 1 cut(s) 136
LpnPI CCDG 7 cut(s) 36, 112, 194, 200, 217, 282, 342
Lsp1109I GCAGC 1 cut(s) 17
LweI GCATC 2 cut(s) 268, 402
MaeI CTAG 2 cut(s) 84, 140
MaeII ACGT 6 cut(s) 48, 57, 102, 232, 363, 405
MaeIII GTNAC 2 cut(s) 95, 263
MbiI CCGCTC 2 cut(s) 147, 296
MboII GAAGA 1 cut(s) 344
MhlI GDGCHC 1 cut(s) 244
MluCI AATT 1 cut(s) 74
MmeI TCCRAC 1 cut(s) 337
MnlI CCTC 1 cut(s) 307
MseI TTAA 1 cut(s) 408
MslI CAYNNNNRTG 2 cut(s) 41, 183
MspI CCGG 3 cut(s) 23, 204, 329
MspR9I CCNGG 1 cut(s) 205
MwoI GCNNNNNNNGC 2 cut(s) 181, 399
NciI CCSGG 1 cut(s) 205
NlaIII CATG 1 cut(s) 188
NmuCI GTSAC 1 cut(s) 95
OliI CACNNNNGTG 1 cut(s) 41
PcsI WCGNNNNNNNCGW 2 cut(s) 54, 402
PfeI GAWTC 1 cut(s) 119
PkrI GCNGC 2 cut(s) 7, 283
PmaCI CACGTG 1 cut(s) 233
PmlI CACGTG 1 cut(s) 233
Ppu21I YACGTR 3 cut(s) 49, 233, 364
PspCI CACGTG 1 cut(s) 233
RsaI GTAC 2 cut(s) 47, 390
RsaNI GTAC 2 cut(s) 46, 389
RseI CAYNNNNRTG 2 cut(s) 41, 183
SaqAI TTAA 1 cut(s) 408
SatI GCNGC 2 cut(s) 6, 282
ScrFI CCNGG 1 cut(s) 205
SduI GDGCHC 1 cut(s) 244
SfaNI GCATC 2 cut(s) 268, 402
SfcI CTRYAG 1 cut(s) 69
SmiMI CAYNNNNRTG 2 cut(s) 41, 183
Sse9I AATT 1 cut(s) 74
SsiI CCGC 5 cut(s) 147, 173, 282, 296, 311
SspMI CTAG 2 cut(s) 84, 140
StyD4I CCNGG 1 cut(s) 203
TaaI ACNGT 2 cut(s) 40, 308
TaiI ACGT 6 cut(s) 51, 60, 105, 235, 366, 408
TaqI TCGA 1 cut(s) 249
TaqII GACCGA 1 cut(s) 206
TasI AATT 1 cut(s) 74
TauI GCSGC 1 cut(s) 284
TfiI GAWTC 1 cut(s) 119
Tru1I TTAA 1 cut(s) 408
Tru9I TTAA 1 cut(s) 408
TscAI CASTG 2 cut(s) 43, 324
TseFI GTSAC 1 cut(s) 95
TseI GCWGC 1 cut(s) 5
Tsp45I GTSAC 1 cut(s) 95
TspGWI ACGGA 1 cut(s) 95
TspRI CASTG 2 cut(s) 43, 324
XapI RAATTY 1 cut(s) 74
XbaI TCTAGA 1 cut(s) 83
XspI CTAG 2 cut(s) 84, 140
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.