MD11G1144900.v1.1

Glyoxalase-like domain

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Reverse (-)
13457010 .. 13457934
925 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1144900.v1.1.491

Sequence Viewer

Length: 426 bp
ATGGCGTCGAAGACGAACACAGTGTTTGCCTATACGGTGGTTTACGTGAAGGATGTTGCGAAATCCACAACCTTCTATTCCAAAGCCTTCGGCTACGATATTCGTCGCTTGGACGACTCCAACAGGTGGGGGGAGTTGGAAAGTGGGCAAACGACAATAGCATTCACACCGCTACACCAGCACGAGACTGATGATCTAACAGGTGCCGTCAAGACCCCAAGCTCCGGCCACGAGAGGCAGCCGATTGAGGTTTGCTTTGCGTACGGTGACGTTGATGCTGCCTATAAGAAGGCGGTGGAGAACGGGGCGGTTCCGGTGAGCGAGCCGGAAGAGAAAGAGTGGGGACAGAAAGTGGGTTACGTAAGAGATCTTGATGGGATCGTGGTGAGGTTGGGAAGCTATGTCAATCCACCAACAAAGCACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

142

Amino Acids

15.65

Weight (kDa)

5.53

Isoelectric Point (pI)

30.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyoxalase_2 PF12681 9 - 133 4.4e-10 Glyoxalase-like domain
Glyoxalase PF00903 10 - 130 3.8e-13 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase_6 PF18029 13 - 126 1.5e-08 Glyoxalase-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0013486)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 203
AccB7I CCANNNNNTGG 1 cut(s) 126
AciI CCGC 3 cut(s) 170, 293, 308
AclWI GGATC 1 cut(s) 386
AcoI YGGCCR 1 cut(s) 226
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 1 cut(s) 263
AfiI CCNNNNNNNGG 2 cut(s) 126, 224
AluBI AGCT 2 cut(s) 222, 399
AluI AGCT 2 cut(s) 222, 399
Alw26I GTCTC 1 cut(s) 179
AlwI GGATC 1 cut(s) 386
AoxI GGCC 1 cut(s) 226
ApeKI GCWGC 2 cut(s) 238, 278
AsuHPI GGTGA 3 cut(s) 278, 328, 397
BanI GGYRCC 1 cut(s) 203
BauI CACGAG 2 cut(s) 182, 230
BbsI GAAGAC 1 cut(s) 17
BbvI GCAGC 2 cut(s) 250, 265
BccI CCATC 1 cut(s) 368
BceAI ACGGC 1 cut(s) 191
BcoDI GTCTC 1 cut(s) 179
BglII AGATCT 1 cut(s) 367
BisI GCNGC 2 cut(s) 239, 279
BlsI GCNGC 2 cut(s) 240, 280
BmiI GGNNCC 2 cut(s) 205, 312
BmsI GCATC 1 cut(s) 265
BpiI GAAGAC 1 cut(s) 17
BsaAI YACGTR 2 cut(s) 46, 361
BsaHI GRCGYC 1 cut(s) 5
BsaWI WCCGGW 1 cut(s) 313
Bsc4I CCNNNNNNNGG 2 cut(s) 126, 224
BseGI GGATG 1 cut(s) 58
BseLI CCNNNNNNNGG 2 cut(s) 126, 224
BseXI GCAGC 2 cut(s) 250, 265
BshFI GGCC 1 cut(s) 228
BshNI GGYRCC 1 cut(s) 203
BsiSI CCGG 3 cut(s) 225, 314, 326
BsiWI CGTACG 1 cut(s) 261
BslFI GGGAC 1 cut(s) 357
BslI CCNNNNNNNGG 2 cut(s) 126, 224
BsmAI GTCTC 1 cut(s) 179
BsmFI GGGAC 1 cut(s) 357
BsmI GAATGC 1 cut(s) 161
BsnI GGCC 1 cut(s) 228
Bsp143I GATC 3 cut(s) 193, 367, 378
BspACI CCGC 3 cut(s) 170, 293, 308
BspANI GGCC 1 cut(s) 228
BspLI GGNNCC 2 cut(s) 205, 312
BspPI GGATC 1 cut(s) 386
BspT107I GGYRCC 1 cut(s) 203
BssMI GATC 3 cut(s) 193, 367, 378
BssNI GRCGYC 1 cut(s) 5
BssSI CACGAG 2 cut(s) 182, 230
Bst2BI CACGAG 2 cut(s) 182, 230
Bst4CI ACNGT 3 cut(s) 22, 37, 266
Bst6I CTCTTC 1 cut(s) 324
BstACI GRCGYC 1 cut(s) 5
BstBAI YACGTR 2 cut(s) 46, 361
BstC8I GCNNGC 1 cut(s) 323
BstF5I GGATG 1 cut(s) 58
BstKTI GATC 3 cut(s) 196, 370, 381
BstMAI GTCTC 1 cut(s) 179
BstMBI GATC 3 cut(s) 193, 367, 378
BstMWI GCNNNNNNNGC 1 cut(s) 178
BstSNI TACGTA 1 cut(s) 361
BstV1I GCAGC 2 cut(s) 250, 265
BstV2I GAAGAC 1 cut(s) 17
BstX2I RGATCY 1 cut(s) 367
BstYI RGATCY 1 cut(s) 367
BsuRI GGCC 1 cut(s) 228
BtsCI GGATG 1 cut(s) 58
BtsIMutI CAGTG 2 cut(s) 27, 421
Cac8I GCNNGC 1 cut(s) 323
Csp6I GTAC 1 cut(s) 262
CviJI RGCY 7 cut(s) 86, 93, 222, 228, 241, 325, 399
CviKI_1 RGCY 7 cut(s) 86, 93, 222, 228, 241, 325, 399
CviQI GTAC 1 cut(s) 262
DpnI GATC 3 cut(s) 195, 369, 380
DpnII GATC 3 cut(s) 193, 367, 378
EaeI YGGCCR 1 cut(s) 226
Eam1104I CTCTTC 1 cut(s) 324
EarI CTCTTC 1 cut(s) 324
Eco105I TACGTA 1 cut(s) 361
FaiI YATR 3 cut(s) 33, 285, 402
FaqI GGGAC 1 cut(s) 357
Fnu4HI GCNGC 2 cut(s) 239, 279
FokI GGATG 1 cut(s) 65
Fsp4HI GCNGC 2 cut(s) 239, 279
GluI GCNGC 2 cut(s) 239, 279
HaeIII GGCC 1 cut(s) 228
HapII CCGG 3 cut(s) 225, 314, 326
Hin1I GRCGYC 1 cut(s) 5
HinfI GANTC 1 cut(s) 116
HpaII CCGG 3 cut(s) 225, 314, 326
HphI GGTGA 3 cut(s) 278, 328, 397
Hpy166II GTNNAC 1 cut(s) 43
Hpy188III TCNNGA 2 cut(s) 211, 371
Hpy8I GTNNAC 1 cut(s) 43
Hpy99I CGWCG 2 cut(s) 10, 108
HpyAV CCTTC 4 cut(s) 43, 82, 97, 283
HpyCH4III ACNGT 3 cut(s) 22, 37, 266
HpyCH4IV ACGT 3 cut(s) 45, 270, 360
HpyF10VI GCNNNNNNNGC 1 cut(s) 178
HpySE526I ACGT 3 cut(s) 45, 270, 360
Hsp92I GRCGYC 1 cut(s) 5
Kzo9I GATC 3 cut(s) 193, 367, 378
LmnI GCTCC 1 cut(s) 227
LpnPI CCDG 6 cut(s) 109, 186, 191, 238, 327, 339
Lsp1109I GCAGC 2 cut(s) 250, 265
LweI GCATC 1 cut(s) 265
MaeII ACGT 3 cut(s) 45, 270, 360
MaeIII GTNAC 2 cut(s) 266, 356
MalI GATC 3 cut(s) 195, 369, 380
MboI GATC 3 cut(s) 193, 367, 378
MboII GAAGA 2 cut(s) 22, 341
MflI RGATCY 1 cut(s) 367
MlyI GAGTC 1 cut(s) 110
MmeI TCCRAC 2 cut(s) 117, 144
MnlI CCTC 3 cut(s) 228, 241, 381
MspI CCGG 3 cut(s) 225, 314, 326
Mva1269I GAATGC 1 cut(s) 161
MwoI GCNNNNNNNGC 1 cut(s) 178
NdeII GATC 3 cut(s) 193, 367, 378
NlaIV GGNNCC 2 cut(s) 205, 312
NmuCI GTSAC 1 cut(s) 266
PctI GAATGC 1 cut(s) 161
Pfl23II CGTACG 1 cut(s) 261
PflMI CCANNNNNTGG 1 cut(s) 126
PkrI GCNGC 2 cut(s) 240, 280
PleI GAGTC 1 cut(s) 110
PpsI GAGTC 1 cut(s) 110
Ppu21I YACGTR 2 cut(s) 46, 361
PspLI CGTACG 1 cut(s) 261
PspN4I GGNNCC 2 cut(s) 205, 312
PsuI RGATCY 1 cut(s) 367
RsaI GTAC 1 cut(s) 263
RsaNI GTAC 1 cut(s) 262
SatI GCNGC 2 cut(s) 239, 279
Sau3AI GATC 3 cut(s) 193, 367, 378
SchI GAGTC 1 cut(s) 110
SfaNI GCATC 1 cut(s) 265
SnaBI TACGTA 1 cut(s) 361
SsiI CCGC 3 cut(s) 170, 293, 308
TaaI ACNGT 3 cut(s) 22, 37, 266
TaiI ACGT 3 cut(s) 48, 273, 363
TaqI TCGA 1 cut(s) 8
TscAI CASTG 1 cut(s) 27
TseFI GTSAC 1 cut(s) 266
TseI GCWGC 2 cut(s) 238, 278
Tsp45I GTSAC 1 cut(s) 266
TspRI CASTG 1 cut(s) 27
Van91I CCANNNNNTGG 1 cut(s) 126
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.