Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0013486

Physical Location & Seq

Genomic Coordinates Forward (+)

2349622 .. 2349956

Gene Structure 335 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1025700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 198 bp

ATGGCGATGGCGTCGAAGACAAACATAGTGTTTGCCTACACAGTGATTTACGTGAAGGATGTTGCCAAATCCACAACCTTCTATTCCAAAGCCTTCGGCTACGATATTCGTCGCTTGGAAGACTCCAACATGTGGGGGGAGTTAGAAAGCCGGCAAACGACGATAGCATTCACACCGCTACATCAGCAAGACCGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyoxalase Glyoxalase_2

Protein Analysis

66

Amino Acids

7.54

Weight (kDa)

8.06

Isoelectric Point (pI)

49.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ble-like_N	PF22677	15 - 43	6.3e-06	Bleomycin resistance protein-like N-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Publication-ready

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Orthologous Genes (Group: OG0013486)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07645
fragaria_vesca	FvH4_3g35580 FvH4_3g35610
malus_domestica	MD07G1053700.v1.1 MD11G1144900.v1.1 MD14G1025700.v1.1
prunus_persica	Prupe.6G080800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0063801
rosa_laevigata	RLG00000035673
rosa_multiflora	Rmu_sc0005685.1_g000007 Rmu_ssc0000309.1_g000017
rosa_roxburghii	Rroxscaffold_1G00017030
rosa_rugosa	Rorug05G0360000 Rorug05G0360000
rosa_samantha	Rh5BG434400 Rh5CG457600 Rh5DG447500
rosa_wichuraiana	Rw5G039320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	132
AciI	CCGC	1 cut(s)	176
AcyI	GRCGYC	1 cut(s)	11
AfiI	CCNNNNNNNGG	1 cut(s)	132
AflIII	ACRYGT	1 cut(s)	129
BbsI	GAAGAC	2 cut(s)	23, 126
BpiI	GAAGAC	2 cut(s)	23, 126
BsaAI	YACGTR	1 cut(s)	52
BsaHI	GRCGYC	1 cut(s)	11
Bsc4I	CCNNNNNNNGG	1 cut(s)	132
Bse118I	RCCGGY	1 cut(s)	150
BseGI	GGATG	1 cut(s)	64
BseLI	CCNNNNNNNGG	1 cut(s)	132
BsiSI	CCGG	1 cut(s)	151
BslI	CCNNNNNNNGG	1 cut(s)	132
BsmI	GAATGC	1 cut(s)	167
BspACI	CCGC	1 cut(s)	176
BsrFI	RCCGGY	1 cut(s)	150
BssAI	RCCGGY	1 cut(s)	150
BssNI	GRCGYC	1 cut(s)	11
Bst4CI	ACNGT	1 cut(s)	43
BstACI	GRCGYC	1 cut(s)	11
BstBAI	YACGTR	1 cut(s)	52
BstC8I	GCNNGC	1 cut(s)	152
BstF5I	GGATG	1 cut(s)	64
BstMWI	GCNNNNNNNGC	1 cut(s)	184
BstNSI	RCATGY	1 cut(s)	133
BstV2I	GAAGAC	2 cut(s)	23, 126
BtgZI	GCGATG	1 cut(s)	20
BtsCI	GGATG	1 cut(s)	64
BtsIMutI	CAGTG	1 cut(s)	48
Cac8I	GCNNGC	1 cut(s)	152
Cfr10I	RCCGGY	1 cut(s)	150
CviAII	CATG	1 cut(s)	130
CviJI	RGCY	3 cut(s)	92, 99, 150
CviKI_1	RGCY	3 cut(s)	92, 99, 150
FaeI	CATG	1 cut(s)	133
FaiI	YATR	2 cut(s)	26, 131
FatI	CATG	1 cut(s)	129
FokI	GGATG	1 cut(s)	71
HapII	CCGG	1 cut(s)	151
Hin1I	GRCGYC	1 cut(s)	11
Hin1II	CATG	1 cut(s)	133
HinfI	GANTC	1 cut(s)	122
HpaII	CCGG	1 cut(s)	151
Hpy99I	CGWCG	3 cut(s)	16, 114, 163
HpyAV	CCTTC	3 cut(s)	49, 88, 103
HpyCH4III	ACNGT	1 cut(s)	43
HpyCH4IV	ACGT	1 cut(s)	51
HpyF10VI	GCNNNNNNNGC	1 cut(s)	184
HpySE526I	ACGT	1 cut(s)	51
Hsp92I	GRCGYC	1 cut(s)	11
Hsp92II	CATG	1 cut(s)	133
KroI	GCCGGC	1 cut(s)	150
KroNI	GCCGGC	1 cut(s)	152
LpnPI	CCDG	1 cut(s)	164
MaeII	ACGT	1 cut(s)	51
MboII	GAAGA	2 cut(s)	28, 131
MlyI	GAGTC	1 cut(s)	116
MmeI	TCCRAC	1 cut(s)	150
MroNI	GCCGGC	1 cut(s)	150
MspI	CCGG	1 cut(s)	151
Mva1269I	GAATGC	1 cut(s)	167
MwoI	GCNNNNNNNGC	1 cut(s)	184
NaeI	GCCGGC	1 cut(s)	152
NgoMIV	GCCGGC	1 cut(s)	150
NlaIII	CATG	1 cut(s)	133
NspI	RCATGY	1 cut(s)	133
PciI	ACATGT	1 cut(s)	129
PctI	GAATGC	1 cut(s)	167
PdiI	GCCGGC	1 cut(s)	152
PflMI	CCANNNNNTGG	1 cut(s)	132
PleI	GAGTC	1 cut(s)	116
PpsI	GAGTC	1 cut(s)	116
Ppu21I	YACGTR	1 cut(s)	52
PscI	ACATGT	1 cut(s)	129
SchI	GAGTC	1 cut(s)	116
SetI	ASST	2 cut(s)	54, 80
SgeI	CNNG	4 cut(s)	64, 127, 142, 163
SsiI	CCGC	1 cut(s)	176
TaaI	ACNGT	1 cut(s)	43
TaiI	ACGT	1 cut(s)	54
TaqI	TCGA	1 cut(s)	14
TscAI	CASTG	1 cut(s)	48
TspRI	CASTG	1 cut(s)	48
Van91I	CCANNNNNTGG	1 cut(s)	132
XceI	RCATGY	1 cut(s)	133

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.