AT1G08125

Lysine methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0003130
Physical Location & Seq
Reverse (-)
2539614 .. 2542362
2749 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G08125.3

Sequence Viewer

Length: 948 bp
ATGGATCCCGACAGGTTAAATTCTCCAAGCACCTGTACTGTTACCATTGAGGTTTTGGGGCACGAATTAGACTTTGCTCAGGATCCAAATTCGAAGCATTTAGGAACGACCGTGTGGGATGCGTCCATGGTGTTTGCCAAATATCTGGGGAAAAATAGCAGGAAGGGAAGGTTTAGTTCATCTAAACTGAAAGGGAAACGTGCTATTGAACTAGGAGCAGGTTGTGGCGTTGCAGGATTTGCTTTGGCGATGCTGGGGTGTGATGTGGTTACAACTGACCAAAAGGAGGTATTACCACTGCTAAAGAGGAATGTAGAATGGAATACGTCCAGAATCGTACAGATGAATCCTGGTTCAGCATTTGGATCGCTCCGGGTTGCAGAACTCGACTGGGGAAACGAAGATCATATAACGGCCGTTGAGCCTCCCTTTGACTATGTCATCGGTACTGATGTTGTATATTCTGAGCAGCTTCTGGAACCGCTATTGCGTACGATACTTGCATTATCAGGGCCAAAGACAACAGTTATGTTGGGATATGAGATACGTTCGACGGTTGTTCATGAGAAAATGCTTCAGATGTGGAAAGACAACTTTGAAGTCAAAACCATACCGAGATCCAAGATGGATGGTGAATACCAAGACCCGAGCATTCATCTGTACATCATGGCACAGAAATCTGCTGCCGAGAGCTCTGGAAACGTAAGCCGAGATGAAGTTGTTATAGACACAGACGAAACAAAGTGTGAGACGAAAGTCCCAACCGGAGAATGCCATAAGAGGGTGGAAGAGGAAGCTGTTGTTACACATGGTCCTCGTCTTAATGAAGATAGTTTGTTGATGAGACTACGGGATGGAAAGCTAAGTGAATGGGAGATGAGAAGGTATGGTACAGTTGCTGCACAGCTTCTCCGTGACGTTAAGATAGATGTTCAGGTGAAAAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_16

Protein Analysis

315

Amino Acids

35.17

Weight (kDa)

5.74

Isoelectric Point (pI)

40.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_16 PF10294 45 - 109 2.5e-11 Lysine methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 209
AciI CCGC 1 cut(s) 482
AclWI GGATC 5 cut(s) 12, 77, 90, 373, 612
AcoI YGGCCR 1 cut(s) 414
AcsI RAATTY 2 cut(s) 19, 88
AcuI CTGAAG 1 cut(s) 560
AfaI GTAC 6 cut(s) 37, 339, 448, 493, 662, 892
AfiI CCNNNNNNNGG 2 cut(s) 286, 781
AgsI TTSAA 2 cut(s) 209, 599
AjnI CCWGG 1 cut(s) 349
AluBI AGCT 5 cut(s) 472, 693, 797, 862, 907
AluI AGCT 5 cut(s) 472, 693, 797, 862, 907
Alw21I GWGCWC 1 cut(s) 695
Alw26I GTCTC 2 cut(s) 743, 838
AlwI GGATC 5 cut(s) 12, 77, 90, 373, 612
AlwNI CAGNNNCTG 2 cut(s) 475, 899
Ama87I CYCGRG 1 cut(s) 646
AoxI GGCC 2 cut(s) 414, 512
ApeKI GCWGC 3 cut(s) 469, 683, 899
ApoI RAATTY 2 cut(s) 19, 88
AspS9I GGNCC 2 cut(s) 512, 812
AsuC2I CCSGG 1 cut(s) 374
AsuHPI GGTGA 1 cut(s) 644
AsuII TTCGAA 1 cut(s) 92
AvaI CYCGRG 1 cut(s) 646
AvaII GGWCC 1 cut(s) 812
BaeGI GKGCMC 1 cut(s) 63
BaeI ACNNNNGTAYC 2 cut(s) 438, 471
BamHI GGATCC 2 cut(s) 4, 82
BanII GRGCYC 1 cut(s) 695
BarI GAAGNNNNNNTAC 2 cut(s) 874, 906
Bbv12I GWGCWC 1 cut(s) 695
BbvI GCAGC 3 cut(s) 481, 670, 886
BccI CCATC 3 cut(s) 619, 623, 848
BceAI ACGGC 2 cut(s) 401, 429
BcgI CGANNNNNNTGC 2 cut(s) 348, 382
BciT130I CCWGG 1 cut(s) 351
BcnI CCSGG 1 cut(s) 374
BcoDI GTCTC 2 cut(s) 743, 838
BfaI CTAG 1 cut(s) 212
BfuAI ACCTGC 1 cut(s) 209
BisI GCNGC 3 cut(s) 470, 684, 900
BlsI GCNGC 3 cut(s) 471, 685, 901
Bme1390I CCNGG 2 cut(s) 351, 374
Bme18I GGWCC 1 cut(s) 812
BmeT110I CYCGRG 1 cut(s) 646
BmgT120I GGNCC 2 cut(s) 512, 812
BmiI GGNNCC 3 cut(s) 6, 84, 480
BmrFI CCNGG 2 cut(s) 351, 374
BmrI ACTGGG 1 cut(s) 400
BmsI GCATC 2 cut(s) 109, 240
BmuI ACTGGG 1 cut(s) 400
BoxI GACNNNNGTC 1 cut(s) 755
Bpu10I CCTNAGC 1 cut(s) 78
Bpu14I TTCGAA 1 cut(s) 92
BpuMI CCSGG 1 cut(s) 374
BsaJI CCNNGG 1 cut(s) 126
BsaWI WCCGGW 1 cut(s) 764
BsaXI ACNNNNNCTCC 2 cut(s) 894, 924
Bsc4I CCNNNNNNNGG 2 cut(s) 286, 781
Bse1I ACTGG 1 cut(s) 395
BseBI CCWGG 1 cut(s) 351
BseDI CCNNGG 1 cut(s) 126
BseGI GGATG 3 cut(s) 124, 634, 859
BseLI CCNNNNNNNGG 2 cut(s) 286, 781
BseMII CTCAG 2 cut(s) 92, 456
BseNI ACTGG 1 cut(s) 395
BseSI GKGCMC 1 cut(s) 63
BseX3I CGGCCG 1 cut(s) 414
BseXI GCAGC 3 cut(s) 481, 670, 886
BseYI CCCAGC 1 cut(s) 253
BsgI GTGCAG 1 cut(s) 885
Bsh1285I CGRYCG 2 cut(s) 111, 417
BshFI GGCC 2 cut(s) 416, 514
BsiEI CGRYCG 2 cut(s) 111, 417
BsiHKAI GWGCWC 1 cut(s) 695
BsiHKCI CYCGRG 1 cut(s) 646
BsiSI CCGG 2 cut(s) 373, 765
BsiWI CGTACG 1 cut(s) 491
BslFI GGGAC 1 cut(s) 743
BslI CCNNNNNNNGG 2 cut(s) 286, 781
BsmAI GTCTC 2 cut(s) 743, 838
BsmBI CGTCTC 1 cut(s) 743
BsmFI GGGAC 1 cut(s) 743
BsmI GAATGC 2 cut(s) 651, 776
BsnI GGCC 2 cut(s) 416, 514
BsoBI CYCGRG 1 cut(s) 646
Bsp119I TTCGAA 1 cut(s) 92
Bsp1286I GDGCHC 2 cut(s) 63, 695
Bsp1407I TGTACA 1 cut(s) 660
Bsp143I GATC 5 cut(s) 4, 82, 365, 403, 617
Bsp19I CCATGG 1 cut(s) 126
BspACI CCGC 1 cut(s) 482
BspANI GGCC 2 cut(s) 416, 514
BspCNI CTCAG 2 cut(s) 91, 457
BspHI TCATGA 1 cut(s) 562
BspLI GGNNCC 3 cut(s) 6, 84, 480
BspMI ACCTGC 1 cut(s) 209
BspPI GGATC 5 cut(s) 12, 77, 90, 373, 612
BspT104I TTCGAA 1 cut(s) 92
BsrGI TGTACA 1 cut(s) 660
BsrI ACTGG 1 cut(s) 395
BssECI CCNNGG 1 cut(s) 126
BssMI GATC 5 cut(s) 4, 82, 365, 403, 617
BssT1I CCWWGG 1 cut(s) 126
Bst2UI CCWGG 1 cut(s) 351
Bst4CI ACNGT 5 cut(s) 40, 112, 526, 556, 895
Bst6I CTCTTC 1 cut(s) 783
BstAPI GCANNNNNTGC 1 cut(s) 239
BstAUI TGTACA 1 cut(s) 660
BstBI TTCGAA 1 cut(s) 92
BstDEI CTNAG 3 cut(s) 78, 465, 863
BstDSI CCRYGG 1 cut(s) 126
BstF5I GGATG 3 cut(s) 124, 634, 859
BstKTI GATC 5 cut(s) 7, 85, 368, 406, 620
BstMAI GTCTC 2 cut(s) 743, 838
BstMBI GATC 5 cut(s) 4, 82, 365, 403, 617
BstMCI CGRYCG 2 cut(s) 111, 417
BstMWI GCNNNNNNNGC 1 cut(s) 239
BstNI CCWGG 1 cut(s) 351
BstPAI GACNNNNGTC 1 cut(s) 755
BstSCI CCNGG 2 cut(s) 349, 372
BstSLI GKGCMC 1 cut(s) 63
BstV1I GCAGC 3 cut(s) 481, 670, 886
BstX2I RGATCY 3 cut(s) 4, 82, 617
BstXI CCANNNNNNTGG 1 cut(s) 145
BstYI RGATCY 3 cut(s) 4, 82, 617
BstZI CGGCCG 1 cut(s) 414
BsuRI GGCC 2 cut(s) 416, 514
BtgI CCRYGG 1 cut(s) 126
BtgZI GCGATG 1 cut(s) 263
BtsCI GGATG 3 cut(s) 124, 634, 859
BtsI GCAGTG 1 cut(s) 296
BtsIMutI CAGTG 1 cut(s) 296
BveI ACCTGC 1 cut(s) 209
CaiI CAGNNNCTG 2 cut(s) 475, 899
CciI TCATGA 1 cut(s) 562
Cfr13I GGNCC 2 cut(s) 512, 812
CseI GACGC 1 cut(s) 111
Csp6I GTAC 6 cut(s) 36, 338, 447, 492, 661, 891
CviAII CATG 4 cut(s) 127, 563, 667, 809
CviJI RGCY 9 cut(s) 416, 424, 472, 514, 693, 708, 797, 862, 907
CviKI_1 RGCY 9 cut(s) 416, 424, 472, 514, 693, 708, 797, 862, 907
CviQI GTAC 6 cut(s) 36, 338, 447, 492, 661, 891
DdeI CTNAG 3 cut(s) 78, 465, 863
DpnI GATC 5 cut(s) 6, 84, 367, 405, 619
DpnII GATC 5 cut(s) 4, 82, 365, 403, 617
EaeI YGGCCR 1 cut(s) 414
EagI CGGCCG 1 cut(s) 414
Eam1104I CTCTTC 1 cut(s) 783
EarI CTCTTC 1 cut(s) 783
Ecl136II GAGCTC 1 cut(s) 693
EclXI CGGCCG 1 cut(s) 414
Eco130I CCWWGG 1 cut(s) 126
Eco24I GRGCYC 1 cut(s) 695
Eco47I GGWCC 1 cut(s) 812
Eco52I CGGCCG 1 cut(s) 414
Eco53kI GAGCTC 1 cut(s) 693
Eco57I CTGAAG 1 cut(s) 560
Eco88I CYCGRG 1 cut(s) 646
EcoICRI GAGCTC 1 cut(s) 693
EcoRII CCWGG 1 cut(s) 349
EcoT14I CCWWGG 1 cut(s) 126
EcoT38I GRGCYC 1 cut(s) 695
ErhI CCWWGG 1 cut(s) 126
Esp3I CGTCTC 1 cut(s) 743
FaeI CATG 4 cut(s) 130, 566, 670, 812
FaqI GGGAC 1 cut(s) 743
FatI CATG 4 cut(s) 126, 562, 666, 808
Fnu4HI GCNGC 3 cut(s) 470, 684, 900
FokI GGATG 3 cut(s) 131, 641, 866
FriOI GRGCYC 1 cut(s) 695
Fsp4HI GCNGC 3 cut(s) 470, 684, 900
FspBI CTAG 1 cut(s) 212
GluI GCNGC 3 cut(s) 470, 684, 900
GsaI CCCAGC 1 cut(s) 257
HaeIII GGCC 2 cut(s) 416, 514
HapII CCGG 2 cut(s) 373, 765
HgaI GACGC 1 cut(s) 111
Hin1II CATG 4 cut(s) 130, 566, 670, 812
HinfI GANTC 2 cut(s) 333, 346
HpaII CCGG 2 cut(s) 373, 765
HphI GGTGA 1 cut(s) 644
Hpy188I TCNGA 2 cut(s) 466, 579
Hpy188III TCNNGA 6 cut(s) 8, 80, 330, 476, 563, 696
Hpy99I CGWCG 1 cut(s) 556
HpyAV CCTTC 3 cut(s) 157, 162, 876
HpyCH4III ACNGT 5 cut(s) 40, 112, 526, 556, 895
HpyCH4IV ACGT 5 cut(s) 199, 326, 547, 702, 918
HpyCH4V TGCA 4 cut(s) 233, 380, 503, 902
HpyF10VI GCNNNNNNNGC 1 cut(s) 239
HpyF3I CTNAG 3 cut(s) 78, 465, 863
HpySE526I ACGT 5 cut(s) 199, 326, 547, 702, 918
Hsp92II CATG 4 cut(s) 130, 566, 670, 812
Kzo9I GATC 5 cut(s) 4, 82, 365, 403, 617
LmnI GCTCC 2 cut(s) 215, 375
Lsp1109I GCAGC 3 cut(s) 481, 670, 886
LweI GCATC 2 cut(s) 109, 240
MaeI CTAG 1 cut(s) 212
MaeII ACGT 5 cut(s) 199, 326, 547, 702, 918
MaeIII GTNAC 4 cut(s) 40, 268, 802, 914
MalI GATC 5 cut(s) 6, 84, 367, 405, 619
MboI GATC 5 cut(s) 4, 82, 365, 403, 617
MboII GAAGA 3 cut(s) 413, 800, 839
MflI RGATCY 3 cut(s) 4, 82, 617
MhlI GDGCHC 2 cut(s) 63, 695
MluCI AATT 3 cut(s) 19, 65, 88
MnlI CCTC 7 cut(s) 43, 280, 300, 435, 774, 784, 825
MseI TTAA 3 cut(s) 17, 822, 921
MspI CCGG 2 cut(s) 373, 765
MspR9I CCNGG 2 cut(s) 351, 374
Mva1269I GAATGC 2 cut(s) 651, 776
MvaI CCWGG 1 cut(s) 351
MwoI GCNNNNNNNGC 1 cut(s) 239
NciI CCSGG 1 cut(s) 374
NcoI CCATGG 1 cut(s) 126
NdeII GATC 5 cut(s) 4, 82, 365, 403, 617
NlaIII CATG 4 cut(s) 130, 566, 670, 812
NlaIV GGNNCC 3 cut(s) 6, 84, 480
NmeAIII GCCGAG 2 cut(s) 712, 734
NmuCI GTSAC 1 cut(s) 914
NspV TTCGAA 1 cut(s) 92
PagI TCATGA 1 cut(s) 562
PctI GAATGC 2 cut(s) 651, 776
PfeI GAWTC 2 cut(s) 333, 346
Pfl23II CGTACG 1 cut(s) 491
PflFI GACNNNGTC 1 cut(s) 437
PkrI GCNGC 3 cut(s) 471, 685, 901
PshAI GACNNNNGTC 1 cut(s) 755
Psp124BI GAGCTC 1 cut(s) 695
Psp6I CCWGG 1 cut(s) 349
PspFI CCCAGC 1 cut(s) 253
PspGI CCWGG 1 cut(s) 349
PspLI CGTACG 1 cut(s) 491
PspN4I GGNNCC 3 cut(s) 6, 84, 480
PspPI GGNCC 2 cut(s) 512, 812
PstNI CAGNNNCTG 2 cut(s) 475, 899
PsuI RGATCY 3 cut(s) 4, 82, 617
PsyI GACNNNGTC 1 cut(s) 437
RsaI GTAC 6 cut(s) 37, 339, 448, 493, 662, 892
RsaNI GTAC 6 cut(s) 36, 338, 447, 492, 661, 891
SacI GAGCTC 1 cut(s) 695
SaqAI TTAA 3 cut(s) 17, 822, 921
SatI GCNGC 3 cut(s) 470, 684, 900
Sau3AI GATC 5 cut(s) 4, 82, 365, 403, 617
Sau96I GGNCC 2 cut(s) 512, 812
ScrFI CCNGG 2 cut(s) 351, 374
SduI GDGCHC 2 cut(s) 63, 695
SfaNI GCATC 2 cut(s) 109, 240
SfuI TTCGAA 1 cut(s) 92
SinI GGWCC 1 cut(s) 812
Sse9I AATT 3 cut(s) 19, 65, 88
SsiI CCGC 1 cut(s) 482
SspMI CTAG 1 cut(s) 212
SstI GAGCTC 1 cut(s) 695
StyD4I CCNGG 2 cut(s) 349, 372
StyI CCWWGG 1 cut(s) 126
TaaI ACNGT 5 cut(s) 40, 112, 526, 556, 895
TaiI ACGT 5 cut(s) 202, 329, 550, 705, 921
TaqI TCGA 3 cut(s) 92, 387, 551
TasI AATT 3 cut(s) 19, 65, 88
TatI WGTACW 2 cut(s) 35, 660
TfiI GAWTC 2 cut(s) 333, 346
Tru1I TTAA 3 cut(s) 17, 822, 921
Tru9I TTAA 3 cut(s) 17, 822, 921
TscAI CASTG 1 cut(s) 303
TseFI GTSAC 1 cut(s) 914
TseI GCWGC 3 cut(s) 469, 683, 899
Tsp45I GTSAC 1 cut(s) 914
TspDTI ATGAA 6 cut(s) 168, 359, 551, 644, 729, 840
TspGWI ACGGA 1 cut(s) 902
TspRI CASTG 1 cut(s) 303
Tth111I GACNNNGTC 1 cut(s) 437
VpaK11BI GGWCC 1 cut(s) 812
XapI RAATTY 2 cut(s) 19, 88
XcmI CCANNNNNNNNNTGG 1 cut(s) 52
XspI CTAG 1 cut(s) 212
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.