MD11G1146300.v1.1

Protein-lysine methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0003130
Physical Location & Seq
Reverse (-)
13759902 .. 13764540
4639 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1146300.v1.1.491

Sequence Viewer

Length: 1011 bp
ATGGAGCTTGACAGATTAAACTCGCCCACCACGTTTACTATGAGTTTGGAAGTTTTGGGCCATGACTTACAGTTTGCTCAGGATCCCAATTCAAAGCATTTAGGAACTACTGTTTGGGATGCCTCATTGGTTTTTGTCAAGTTTCTGGAAAAGAATTGCAGAAAGGGAAGGTTCTCACCACCTAAAATGAAAGGAAAACGTGTCATTGAACTTGGAGCAGGTTGTGGAGTAGCTGGGTTTGGCATGGCATTACTGGGGTGTGATGTGGTTACGACAGATCAAGTGGAGGTTTTGCCGTTGCTAATGAGAAATGTTGAACGGAACACTTCAAGGATCACACAGATGAATTCTGGTTCTAACTCATTTGGGTCGATCCAGGCAGCAGAGTTGAGCTGGGGAAATGATGATCATGTAAGAGCTGTTGAACCACCATTTGACTACATCATTGGAACTGATGTTGTCTATAAAGAAAATCTGTTGGAACCACTGTTGCAGACAATACATGCATTATCAGGCCCGAAAACTACAATTTTGATGGGGTATGAGATTCGATCTACAAGTGTCCATGAACAAATGCTTCAAATGTGGAAAAGAAACTTCGAGGTGAAAACTGTTCCAAATTCAAAGATGGACAGTACCTACCAACATCCAGATATTCAACTTTACATTATGACATTAAAGCCTCCGGAGGGTTACGCAGAAAACGCAGCTGAGGTGATTGATCAGAATGAGGATGAAGTGGAGGCTGGTGCAGAAGAAGCGGATAAGGTGATGGATCAGAAAGTTGATGAAGCAAAAAATACAAGTGAAGAAAACGCCGTTAATGTGATTGATCAGAAAGTTGAAGCTGAGAGCCGTAAGGAAAAAGGTGACACTGGTTCCCTCGATGAAAATGTTGAGGAAGATTGCGAGCCAATGACAAGGCTTCAGAATGATAAACTTACTGATTGGGAAGCTAGAAGATATGGCTCAATGGCTGCGCGCCTTCTTCACGACATCAAAATTACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_16

Protein Analysis

337

Amino Acids

37.67

Weight (kDa)

4.8

Isoelectric Point (pI)

33.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_16 PF10294 21 - 190 1.8e-32 Lysine methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 209
AccII CGCG 1 cut(s) 982
AccIII TCCGGA 1 cut(s) 685
AciI CCGC 1 cut(s) 761
AclWI GGATC 5 cut(s) 77, 90, 341, 367, 783
AcsI RAATTY 2 cut(s) 346, 619
AcuI CTGAAG 1 cut(s) 911
AfaI GTAC 1 cut(s) 637
AfiI CCNNNNNNNGG 1 cut(s) 689
AflIII ACRYGT 1 cut(s) 199
AgsI TTSAA 9 cut(s) 93, 209, 317, 330, 425, 581, 624, 659, 845
AjnI CCWGG 1 cut(s) 375
AjuI GAANNNNNNNTTGG 2 cut(s) 97, 129
AluBI AGCT 7 cut(s) 7, 233, 393, 419, 710, 848, 956
AluI AGCT 7 cut(s) 7, 233, 393, 419, 710, 848, 956
AlwI GGATC 5 cut(s) 77, 90, 341, 367, 783
Aor13HI TCCGGA 1 cut(s) 685
AoxI GGCC 2 cut(s) 58, 514
ApeKI GCWGC 3 cut(s) 380, 707, 977
ApoI RAATTY 2 cut(s) 346, 619
ArsI GACNNNNNNTTYG 2 cut(s) 56, 88
AspLEI GCGC 2 cut(s) 982, 984
AspS9I GGNCC 2 cut(s) 58, 515
AsuHPI GGTGA 5 cut(s) 168, 616, 727, 781, 881
BamHI GGATCC 1 cut(s) 82
BbvCI CCTCAGC 1 cut(s) 711
BbvI GCAGC 3 cut(s) 392, 719, 964
BccI CCATC 3 cut(s) 529, 622, 766
BceAI ACGGC 3 cut(s) 280, 803, 840
BciT130I CCWGG 1 cut(s) 377
BclI TGATCA 3 cut(s) 406, 721, 832
BfaI CTAG 1 cut(s) 957
BfuAI ACCTGC 1 cut(s) 209
BisI GCNGC 3 cut(s) 381, 708, 978
BlsI GCNGC 3 cut(s) 382, 709, 979
Bme1390I CCNGG 1 cut(s) 377
BmgT120I GGNCC 2 cut(s) 58, 515
BmiI GGNNCC 3 cut(s) 84, 483, 880
BmrFI CCNGG 1 cut(s) 377
BmrI ACTGGG 1 cut(s) 263
BmsI GCATC 1 cut(s) 109
BmuI ACTGGG 1 cut(s) 263
Bpu10I CCTNAGC 2 cut(s) 78, 711
BsaWI WCCGGW 1 cut(s) 685
Bsc4I CCNNNNNNNGG 1 cut(s) 689
Bse1I ACTGG 2 cut(s) 258, 880
BseAI TCCGGA 1 cut(s) 685
BseBI CCWGG 1 cut(s) 377
BseGI GGATG 3 cut(s) 124, 646, 739
BseLI CCNNNNNNNGG 1 cut(s) 689
BseMII CTCAG 3 cut(s) 92, 702, 840
BseNI ACTGG 2 cut(s) 258, 880
BsePI GCGCGC 1 cut(s) 980
BseXI GCAGC 3 cut(s) 392, 719, 964
BseYI CCCAGC 2 cut(s) 233, 393
BsgI GTGCAG 1 cut(s) 771
Bsh1236I CGCG 1 cut(s) 982
BshFI GGCC 2 cut(s) 60, 516
BsiSI CCGG 1 cut(s) 686
BslI CCNNNNNNNGG 1 cut(s) 689
BsnI GGCC 2 cut(s) 60, 516
Bsp13I TCCGGA 1 cut(s) 685
Bsp143I GATC 9 cut(s) 82, 277, 333, 372, 406, 551, 721, 775, 832
BspACI CCGC 1 cut(s) 761
BspANI GGCC 2 cut(s) 60, 516
BspCNI CTCAG 3 cut(s) 91, 703, 841
BspEI TCCGGA 1 cut(s) 685
BspFNI CGCG 1 cut(s) 982
BspLI GGNNCC 3 cut(s) 84, 483, 880
BspMI ACCTGC 1 cut(s) 209
BspPI GGATC 5 cut(s) 77, 90, 341, 367, 783
BsrI ACTGG 2 cut(s) 258, 880
BssHII GCGCGC 1 cut(s) 980
BssMI GATC 9 cut(s) 82, 277, 333, 372, 406, 551, 721, 775, 832
Bst2UI CCWGG 1 cut(s) 377
Bst4CI ACNGT 5 cut(s) 72, 112, 489, 613, 635
BstC8I GCNNGC 2 cut(s) 911, 982
BstDEI CTNAG 3 cut(s) 78, 711, 849
BstF5I GGATG 3 cut(s) 124, 646, 739
BstFNI CGCG 1 cut(s) 982
BstHHI GCGC 2 cut(s) 982, 984
BstKTI GATC 9 cut(s) 85, 280, 336, 375, 409, 554, 724, 778, 835
BstMBI GATC 9 cut(s) 82, 277, 333, 372, 406, 551, 721, 775, 832
BstMWI GCNNNNNNNGC 2 cut(s) 704, 758
BstNI CCWGG 1 cut(s) 377
BstNSI RCATGY 1 cut(s) 506
BstSCI CCNGG 1 cut(s) 375
BstUI CGCG 1 cut(s) 982
BstV1I GCAGC 3 cut(s) 392, 719, 964
BstX2I RGATCY 1 cut(s) 82
BstYI RGATCY 1 cut(s) 82
BsuRI GGCC 2 cut(s) 60, 516
BtsCI GGATG 3 cut(s) 124, 646, 739
BtsIMutI CAGTG 2 cut(s) 485, 873
BveI ACCTGC 1 cut(s) 209
Cac8I GCNNGC 2 cut(s) 911, 982
CfoI GCGC 2 cut(s) 982, 984
Cfr13I GGNCC 2 cut(s) 58, 515
Csp6I GTAC 1 cut(s) 636
CviAII CATG 5 cut(s) 62, 244, 410, 503, 566
CviQI GTAC 1 cut(s) 636
DdeI CTNAG 3 cut(s) 78, 711, 849
DpnI GATC 9 cut(s) 84, 279, 335, 374, 408, 553, 723, 777, 834
DpnII GATC 9 cut(s) 82, 277, 333, 372, 406, 551, 721, 775, 832
Eco57I CTGAAG 1 cut(s) 911
EcoRI GAATTC 1 cut(s) 346
EcoRII CCWGG 1 cut(s) 375
EcoT22I ATGCAT 1 cut(s) 508
FaeI CATG 5 cut(s) 65, 247, 413, 506, 569
FatI CATG 5 cut(s) 61, 243, 409, 502, 565
FbaI TGATCA 3 cut(s) 406, 721, 832
Fnu4HI GCNGC 3 cut(s) 381, 708, 978
FokI GGATG 3 cut(s) 131, 633, 746
Fsp4HI GCNGC 3 cut(s) 381, 708, 978
FspBI CTAG 1 cut(s) 957
GlaI GCGC 2 cut(s) 981, 983
GluI GCNGC 3 cut(s) 381, 708, 978
GsaI CCCAGC 2 cut(s) 237, 397
HaeIII GGCC 2 cut(s) 60, 516
HapII CCGG 1 cut(s) 686
HhaI GCGC 2 cut(s) 982, 984
Hin1II CATG 5 cut(s) 65, 247, 413, 506, 569
Hin6I GCGC 2 cut(s) 980, 982
HinP1I GCGC 2 cut(s) 980, 982
HinfI GANTC 1 cut(s) 547
HpaII CCGG 1 cut(s) 686
HphI GGTGA 5 cut(s) 168, 616, 727, 781, 881
Hpy166II GTNNAC 1 cut(s) 36
Hpy188I TCNGA 4 cut(s) 726, 780, 837, 930
Hpy188III TCNNGA 5 cut(s) 80, 146, 650, 686, 992
Hpy8I GTNNAC 1 cut(s) 36
HpyAV CCTTC 2 cut(s) 162, 995
HpyCH4III ACNGT 5 cut(s) 72, 112, 489, 613, 635
HpyCH4IV ACGT 2 cut(s) 32, 199
HpyCH4V TGCA 4 cut(s) 159, 493, 506, 752
HpyF10VI GCNNNNNNNGC 2 cut(s) 704, 758
HpyF3I CTNAG 3 cut(s) 78, 711, 849
HpySE526I ACGT 2 cut(s) 32, 199
Hsp92II CATG 5 cut(s) 65, 247, 413, 506, 569
HspAI GCGC 2 cut(s) 980, 982
Kpn2I TCCGGA 1 cut(s) 685
Ksp22I TGATCA 3 cut(s) 406, 721, 832
Kzo9I GATC 9 cut(s) 82, 277, 333, 372, 406, 551, 721, 775, 832
LmnI GCTCC 2 cut(s) 4, 215
Lsp1109I GCAGC 3 cut(s) 392, 719, 964
LweI GCATC 1 cut(s) 109
MaeI CTAG 1 cut(s) 957
MaeII ACGT 2 cut(s) 32, 199
MaeIII GTNAC 3 cut(s) 268, 692, 869
MalI GATC 9 cut(s) 84, 279, 335, 374, 408, 553, 723, 777, 834
MboI GATC 9 cut(s) 82, 277, 333, 372, 406, 551, 721, 775, 832
MboII GAAGA 5 cut(s) 767, 821, 914, 972, 980
MflI RGATCY 1 cut(s) 82
MluCI AATT 6 cut(s) 88, 154, 346, 528, 619, 1002
MmeI TCCRAC 1 cut(s) 459
Mph1103I ATGCAT 1 cut(s) 508
MroI TCCGGA 1 cut(s) 685
MseI TTAA 3 cut(s) 17, 677, 822
MslI CAYNNNNRTG 1 cut(s) 341
MspA1I CMGCKG 1 cut(s) 710
MspI CCGG 1 cut(s) 686
MspR9I CCNGG 1 cut(s) 377
MvaI CCWGG 1 cut(s) 377
MvnI CGCG 1 cut(s) 982
MwoI GCNNNNNNNGC 2 cut(s) 704, 758
NdeII GATC 9 cut(s) 82, 277, 333, 372, 406, 551, 721, 775, 832
NlaIII CATG 5 cut(s) 65, 247, 413, 506, 569
NlaIV GGNNCC 3 cut(s) 84, 483, 880
NmuCI GTSAC 1 cut(s) 869
NsiI ATGCAT 1 cut(s) 508
NspI RCATGY 1 cut(s) 506
PauI GCGCGC 1 cut(s) 980
PcsI WCGNNNNNNNCGW 1 cut(s) 29
PfeI GAWTC 1 cut(s) 547
PkrI GCNGC 3 cut(s) 382, 709, 979
Psp6I CCWGG 1 cut(s) 375
PspFI CCCAGC 2 cut(s) 233, 393
PspGI CCWGG 1 cut(s) 375
PspN4I GGNNCC 3 cut(s) 84, 483, 880
PspPI GGNCC 2 cut(s) 58, 515
PsuI RGATCY 1 cut(s) 82
PteI GCGCGC 1 cut(s) 980
PvuII CAGCTG 1 cut(s) 710
RsaI GTAC 1 cut(s) 637
RsaNI GTAC 1 cut(s) 636
RseI CAYNNNNRTG 1 cut(s) 341
SaqAI TTAA 3 cut(s) 17, 677, 822
SatI GCNGC 3 cut(s) 381, 708, 978
Sau3AI GATC 9 cut(s) 82, 277, 333, 372, 406, 551, 721, 775, 832
Sau96I GGNCC 2 cut(s) 58, 515
ScrFI CCNGG 1 cut(s) 377
SfaNI GCATC 1 cut(s) 109
SmiMI CAYNNNNRTG 1 cut(s) 341
Sse9I AATT 6 cut(s) 88, 154, 346, 528, 619, 1002
SsiI CCGC 1 cut(s) 761
SspMI CTAG 1 cut(s) 957
StyD4I CCNGG 1 cut(s) 375
TaaI ACNGT 5 cut(s) 72, 112, 489, 613, 635
TaiI ACGT 2 cut(s) 35, 202
TaqI TCGA 4 cut(s) 371, 550, 600, 885
TasI AATT 6 cut(s) 88, 154, 346, 528, 619, 1002
TfiI GAWTC 1 cut(s) 547
Tru1I TTAA 3 cut(s) 17, 677, 822
Tru9I TTAA 3 cut(s) 17, 677, 822
TscAI CASTG 2 cut(s) 492, 880
TseFI GTSAC 1 cut(s) 869
TseI GCWGC 3 cut(s) 380, 707, 977
Tsp45I GTSAC 1 cut(s) 869
TspDTI ATGAA 6 cut(s) 203, 359, 582, 750, 804, 903
TspGWI ACGGA 1 cut(s) 334
TspRI CASTG 2 cut(s) 492, 880
XapI RAATTY 2 cut(s) 346, 619
XceI RCATGY 1 cut(s) 506
XspI CTAG 1 cut(s) 957
Zsp2I ATGCAT 1 cut(s) 508
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.