Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005414

Physical Location & Seq

Genomic Coordinates Reverse (-)

2921064 .. 2925826

Gene Structure 4763 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G09060.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2793 bp

ATGAATGCTAATGAGCAAACTCGATCCGCCAATGGCATTGGCAATGGCAATGGTGAGTCTATTCCCGGGATTCCAGATGACTTACGGTGCAAGAGATCGGATGGTAAACAGTGGAGATGCACTGCAATGTCCATGGCTGATAAGACTGTTTGTGAGAAGCACTACATCCAAGCAAAGAAGCGGGCGGCTAATTCTGCTTTCAGGGCGAACCAGAAGAAAGCGAAAAGGCGATCATCGTTAGGCGAAACAGATACGTATTCGGAAGGGAAGATGGATGATTTCGAGTTACCAGTCACCAGCATTGACCACTATAATAACGGTCTTGCCTCTGCTTCCAAGAGTAATGGTAGACTAGAGAAGAGACATAATAAAAGCCTGATGCGGTACTCGCCCGAGACACCGATGATGAGGAGTTTCTCTCCACGTGTTGCAGTGGATTTGAATGATGACTTGGGTAGAGATGTTGTAATGTTTGAAGAGGGCTACAGATCTTATAGGACACCACCATCTGTTGCTGTTATGGATCCGACACGAAACAGATCACACCAAAGCACCAGTCCTATGGAATACTCAGCAGCAAGCACAGATGTGTCTGCAGAGTCTTTGGGGGAAATCTGCCATCAATGCCAGAGAAAAGATAGAGAGAGAATCATTTCTTGCCTCAAATGCAATCAAAGAGCCTTCTGCCACAATTGTCTATCGGCAAGGTACTCGGAGATATCACTTGAAGAAGTCGAGAAAGTTTGCCCTGCATGTCGTGGCTTGTGTGATTGCAAATCTTGCCTGCGTTCAGATAATACAATAAAGGTTCGGATCCGGGAAATACCCGTTTTGGACAAGTTGCAGTATCTTTATCGTCTATTATCAGCTGTCCTACCAGTCATAAAGCAGATCCATCTTGAACAATGTATGGAAGTTGAACTAGAGAAGAGGCTTCGTGAAGTTGAGATTGATCTTGTCAGGGCAAGATTGAAAGCAGATGAGCAGATGTGCTGCAACGTGTGTCGGATACCAGTTGTTGACTACTACCGTCACTGTCCGAACTGCTCATATGACCTTTGCCTGAGATGCTGTCAAGATCTACGGGAAGAGTCTTCAGTGACGATTAGTGGGACTAACCAAAACGTACAAGATAGAAAAGGAGCTCCCAAACTAAAACTAAACTTTTCATACAAGTTTCCTGAGTGGGAAGCCAACGGTGATGGGAGCATCCCTTGCCCTCCTAAGGAGTATGGAGGCTGCGGTTCACATTCTTTGAATCTTGCCCGCATTTTCAAGATGAATTGGGTTGCAAAGCTTGTGAAAAATGCTGAGGAGATTGTTAGTGGCTGCAAATTATCTGATCTTCTGAACCCTGATATGTGTGATTCAAGATTCTGCAAATTTGCTGAGAGAGAAGAGAGCGGTGACAACTACGTGTACAGCCCGTCGCTTGAAACGATTAAAACTGATGGAGTAGCTAAGTTTGAGCAACAATGGGCAGAGGGTCGGCTTGTTACTGTGAAAATGGTACTTGATGACTCATCTTGCTCTAGATGGGATCCTGAGACTATTTGGAGGGATATAGACGAGCTTTCGGACGAGAAACTGAGAGAACATGATCCATTCTTGAAGGCCATTAATTGCTTGGATGGTTTAGAGGTTGATGTAAGACTTGGGGAGTTTACAAGAGCATATAAAGATGGAAAGAACCAAGAGACAGGTCTTCCGCTATTGTGGAAGTTAAAGGACTGGCCGAGCCCAAGTGCTTCCGAGGAGTTCATTTTCTACCAAAGACCTGAGTTTATCAGAAGTTTTCCGTTTCTCGAGTACATTCATCCCCGGTTAGGCCTTCTGAATGTTGCAGCCAAGTTACCTCATTACTCGCTCCAAAACGATTCAGGTCCAAAGATTTATGTGTCTTGTGGGACGTACCAAGAAATCAGTGCTGGCGATTCATTGACTGGTATTCACTACAACATGCGTGACATGGTATACCTATTGGTGCACACGTCTGAAGAAACAACATTCGAAAGGGTGAGAAAAACAAAACCTGTTCCAGAGGAACCTGACCAGAAGATGAGCGAAAATGAGTCACTTCTTAGCCCTGAGCAGAAATTAAGGGACGGAGAGTTACATGATCTATCACTTGGTGAAGCCAGTATGGAGAAGAATGAACCTGAGTTGGCGTTGACTGTGAATCCAGAGAACTTAACGGAAAACGGTGACAACATGGAATCTTCTTGCACATCTTCATGTGCAGGAGGAGCCCAGTGGGATGTCTTTCGACGCCAAGACGTCCCAAAGTTGTCCGGGTATTTGCAGAGAACATTCCAGAAGCCTGATAATATCCAGACTGATTTTGTGTCACGCCCGTTGTATGAAGGATTGTTCTTAAATGAACACCACAAGAGACAACTAAGAGACGAGTTTGGAGTTGAGCCATGGACATTTGAGCAACATCGTGGTGAGGCTATCTTCATTCCGGCTGGATGTCCGTTCCAAATCACTAATCTTCAGTCGAATATTCAGGTGGCACTTGACTTCTTGTGCCCTGAAAGCGTTGGAGAGTCAGCAAGACTAGCTGAAGAAATCCGGTGTTTACCAAACGACCACGAGGCAAAACTTCAGATTCTAGAGATTGGAAAGATATCATTATACGCAGCTAGCTCAGCCATTAAAGAGGTTCAGAAACTGGTCTTGGATCCAAAGTTTGGAGCAGAGCTTGGATTTGAAGACTCTAACTTAACCAAAGCAGTCTCTCACAACTTAGACGAGGCAACCAAGCGGCCGCAGCAAAACAGCTGCACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000785 GO:0000976 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006325 GO:0006355 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008214 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016043 GO:0016569 GO:0016570 GO:0016577 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031326 GO:0031490 GO:0031974 GO:0031981 GO:0032451 GO:0032452 GO:0032454 GO:0033169 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0070076 GO:0070988 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:0140096 GO:1901363 GO:1901564 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03010 ko04714 map03010 map04714

Pfam Domains

Protein Families

JmjC WRC zf-4CXXC_R1

Protein Analysis

930

Amino Acids

105.59

Weight (kDa)

5.65

Isoelectric Point (pI)

52.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WRC	PF08879	25 - 65	5.5e-14	WRC
zf-4CXXC_R1	PF10497	201 - 267	3.9e-10	Zinc-finger domain of monoamine-oxidase A repressor R1
JmjC	PF02373	750 - 842	3.8e-08	JmjC domain, hydroxylase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005414)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09060 AT1G09060 AT1G09060 AT1G09060
fragaria_vesca	FvH4_6g06290 FvH4_6g06290 FvH4_6g06290 FvH4_6g06290
malus_domestica	MD04G1202800.v1.1 MD12G1216600.v1.1
prunus_persica	Prupe.6G322900_v2.0.a1 Prupe.6G322900_v2.0.a1 Prupe.6G322900_v2.0.a1 Prupe.6G322900_v2.0.a1 Prupe.6G322900_v2.0.a1
pyrus_communis	pycom04g17890 pycom12g20210
rosa_chinensis	RchiOBHm_Chr3g0455331
rosa_laevigata	RLG00000025369
rosa_multiflora	Rmu_sc0002169.1_g000043
rosa_roxburghii	Rroxscaffold_6G00424370
rosa_rugosa	Rorug03G0006300 Rorug03G0006400 Rorug03G0006500
rosa_samantha	Rh3AG066100 Rh3BG068300 Rh3CG066700 Rh3DG068200
rosa_wichuraiana	Rw3G005210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	2280
AccB7I	CCANNNNNTGG	1 cut(s)	2693
AccBSI	CCGCTC	1 cut(s)	1404
AccI	GTMKAC	2 cut(s)	349, 1974
AcoI	YGGCCR	2 cut(s)	1733, 2768
AcsI	RAATTY	1 cut(s)	1382
AcuI	CTGAAG	5 cut(s)	1080, 2016, 2480, 2586, 2591
AcvI	CACGTG	1 cut(s)	425
AcyI	GRCGYC	2 cut(s)	2269, 2277
AdeI	CACNNNGTG	1 cut(s)	2132
AfaI	GTAC	7 cut(s)	386, 710, 1128, 1421, 1512, 1811, 1913
AfiI	CCNNNNNNNGG	3 cut(s)	1225, 1826, 2693
AflIII	ACRYGT	4 cut(s)	424, 999, 1416, 1989
AjiI	CACGTC	1 cut(s)	1992
AjuI	GAANNNNNNNTTGG	4 cut(s)	434, 466, 2663, 2695
AleI	CACNNNNGTG	1 cut(s)	587
Alw21I	GWGCWC	2 cut(s)	1147, 1989
Alw26I	GTCTC	7 cut(s)	355, 389, 1541, 1691, 2386, 2397, 2743
Alw44I	GTGCAC	1 cut(s)	1985
AlwNI	CAGNNNCTG	1 cut(s)	2674
Ama87I	CYCGRG	3 cut(s)	65, 392, 1805
AoxI	GGCC	4 cut(s)	1614, 1733, 1828, 2768
ApaLI	GTGCAC	1 cut(s)	1985
ApeKI	GCWGC	8 cut(s)	575, 993, 1239, 1329, 1844, 2642, 2773, 2784
ApoI	RAATTY	1 cut(s)	1382
ArsI	GACNNNNNNTTYG	2 cut(s)	541, 573
AseI	ATTAAT	1 cut(s)	1620
Asp700I	GAANNNNTTC	1 cut(s)	652
AspS9I	GGNCC	1 cut(s)	1883
AsuC2I	CCSGG	5 cut(s)	66, 67, 818, 1822, 2293
AsuHPI	GGTGA	8 cut(s)	65, 286, 1211, 1418, 2029, 2144, 2216, 2459
AsuII	TTCGAA	1 cut(s)	2010
AsuNHI	GCTAGC	1 cut(s)	2645
AvaI	CYCGRG	3 cut(s)	65, 392, 1805
AvaII	GGWCC	1 cut(s)	1883
AxyI	CCTNAGG	1 cut(s)	1224
BaeGI	GKGCMC	2 cut(s)	1989, 2534
BamHI	GGATCC	4 cut(s)	523, 813, 1540, 2683
BanII	GRGCYC	3 cut(s)	1147, 1742, 2251
BauI	CACGAG	1 cut(s)	2594
BbrPI	CACGTG	1 cut(s)	425
BbsI	GAAGAC	3 cut(s)	1086, 1697, 2721
Bbv12I	GWGCWC	2 cut(s)	1147, 1989
BbvCI	CCTCAGC	1 cut(s)	1311
BbvI	GCAGC	8 cut(s)	587, 980, 1226, 1316, 1856, 2654, 2771, 2785
BcgI	CGANNNNNNTGC	2 cut(s)	693, 727
BciVI	GTATCC	1 cut(s)	1002
BcnI	CCSGG	5 cut(s)	66, 67, 818, 1822, 2293
BcoDI	GTCTC	7 cut(s)	355, 389, 1541, 1691, 2386, 2397, 2743
BfaI	CTAG	6 cut(s)	353, 923, 1533, 2561, 2615, 2646
BfmI	CTRYAG	2 cut(s)	484, 594
BfuI	GTATCC	1 cut(s)	1002
BglII	AGATCT	2 cut(s)	488, 1078
BlpI	GCTNAGC	1 cut(s)	2650
Bme1390I	CCNGG	5 cut(s)	66, 67, 818, 1822, 2293
Bme18I	GGWCC	1 cut(s)	1883
BmeT110I	CYCGRG	3 cut(s)	65, 392, 1805
BmgBI	CACGTC	1 cut(s)	1992
BmgT120I	GGNCC	1 cut(s)	1883
BmiI	GGNNCC	6 cut(s)	525, 815, 1542, 2046, 2248, 2685
BmrFI	CCNGG	5 cut(s)	66, 67, 818, 1822, 2293
BmrI	ACTGGG	1 cut(s)	2245
BmsI	GCATC	4 cut(s)	107, 369, 1058, 1218
BmtI	GCTAGC	1 cut(s)	2649
BmuI	ACTGGG	1 cut(s)	2245
BpiI	GAAGAC	3 cut(s)	1086, 1697, 2721
BplI	GAGNNNNNCTC	2 cut(s)	403, 435
Bpu10I	CCTNAGC	2 cut(s)	1311, 2088
Bpu1102I	GCTNAGC	1 cut(s)	2650
Bpu14I	TTCGAA	1 cut(s)	2010
BpuMI	CCSGG	5 cut(s)	66, 67, 818, 1822, 2293
BsaAI	YACGTR	3 cut(s)	255, 425, 1417
BsaHI	GRCGYC	2 cut(s)	2269, 2277
BsaJI	CCNNGG	5 cut(s)	65, 132, 1752, 1820, 2423
BsaWI	WCCGGW	1 cut(s)	2574
Bsc4I	CCNNNNNNNGG	3 cut(s)	1225, 1826, 2693
Bse1I	ACTGG	9 cut(s)	290, 555, 878, 1013, 1736, 1948, 2139, 2251, 2679
Bse21I	CCTNAGG	1 cut(s)	1224
Bse3DI	GCAATG	3 cut(s)	49, 55, 132
BseDI	CCNNGG	5 cut(s)	65, 132, 1752, 1820, 2423
BseGI	GGATG	8 cut(s)	106, 165, 280, 1209, 1636, 1816, 2263, 2477
BseLI	CCNNNNNNNGG	3 cut(s)	1225, 1826, 2693
BseMI	GCAATG	3 cut(s)	49, 55, 132
BseNI	ACTGG	9 cut(s)	290, 555, 878, 1013, 1736, 1948, 2139, 2251, 2679
BseRI	GAGGAG	4 cut(s)	424, 1328, 1769, 2259
BseSI	GKGCMC	2 cut(s)	1989, 2534
BseX3I	CGGCCG	1 cut(s)	2768
BseXI	GCAGC	8 cut(s)	587, 980, 1226, 1316, 1856, 2654, 2771, 2785
BsgI	GTGCAG	2 cut(s)	2259, 2770
Bsh1285I	CGRYCG	1 cut(s)	2771
BshFI	GGCC	4 cut(s)	1616, 1735, 1830, 2770
BsiEI	CGRYCG	1 cut(s)	2771
BsiHKAI	GWGCWC	2 cut(s)	1147, 1989
BsiHKCI	CYCGRG	3 cut(s)	65, 392, 1805
BsiSI	CCGG	6 cut(s)	66, 817, 1822, 2292, 2465, 2575
BslFI	GGGAC	4 cut(s)	1126, 1921, 2117, 2264
BslI	CCNNNNNNNGG	3 cut(s)	1225, 1826, 2693
BsmAI	GTCTC	7 cut(s)	355, 389, 1541, 1691, 2386, 2397, 2743
BsmBI	CGTCTC	1 cut(s)	2397
BsmFI	GGGAC	4 cut(s)	1126, 1921, 2117, 2264
BsmI	GAATGC	1 cut(s)	10
BsnI	GGCC	4 cut(s)	1616, 1735, 1830, 2770
BsoBI	CYCGRG	3 cut(s)	65, 392, 1805
Bsp119I	TTCGAA	1 cut(s)	2010
Bsp1286I	GDGCHC	5 cut(s)	1147, 1742, 1989, 2251, 2534
Bsp1407I	TGTACA	1 cut(s)	1419
Bsp1720I	GCTNAGC	1 cut(s)	2650
Bsp19I	CCATGG	2 cut(s)	132, 2423
BspANI	GGCC	4 cut(s)	1616, 1735, 1830, 2770
BspLI	GGNNCC	6 cut(s)	525, 815, 1542, 2046, 2248, 2685
BspMAI	CTGCAG	1 cut(s)	598
BspOI	GCTAGC	1 cut(s)	2649
BspT104I	TTCGAA	1 cut(s)	2010
BsrBI	CCGCTC	1 cut(s)	1404
BsrDI	GCAATG	3 cut(s)	49, 55, 132
BsrGI	TGTACA	1 cut(s)	1419
BsrI	ACTGG	9 cut(s)	290, 555, 878, 1013, 1736, 1948, 2139, 2251, 2679
BssECI	CCNNGG	5 cut(s)	65, 132, 1752, 1820, 2423
BssNAI	GTATAC	1 cut(s)	1975
BssNI	GRCGYC	2 cut(s)	2269, 2277
BssSI	CACGAG	1 cut(s)	2594
BssT1I	CCWWGG	2 cut(s)	132, 2423
Bst1107I	GTATAC	1 cut(s)	1975
Bst2BI	CACGAG	1 cut(s)	2594
Bst6I	CTCTTC	5 cut(s)	353, 471, 923, 1083, 1392
BstACI	GRCGYC	2 cut(s)	2269, 2277
BstAPI	GCANNNNNTGC	2 cut(s)	780, 1215
BstAUI	TGTACA	1 cut(s)	1419
BstBAI	YACGTR	3 cut(s)	255, 425, 1417
BstBI	TTCGAA	1 cut(s)	2010
BstC8I	GCNNGC	6 cut(s)	183, 580, 785, 1267, 1930, 2647
BstDSI	CCRYGG	2 cut(s)	132, 2423
BstF5I	GGATG	8 cut(s)	106, 165, 280, 1209, 1636, 1816, 2263, 2477
BstMAI	GTCTC	7 cut(s)	355, 389, 1541, 1691, 2386, 2397, 2743
BstMCI	CGRYCG	1 cut(s)	2771
BstNSI	RCATGY	2 cut(s)	756, 1963
BstSCI	CCNGG	5 cut(s)	64, 65, 816, 1820, 2291
BstSFI	CTRYAG	2 cut(s)	484, 594
BstSLI	GKGCMC	2 cut(s)	1989, 2534
BstSNI	TACGTA	1 cut(s)	255
BstV1I	GCAGC	8 cut(s)	587, 980, 1226, 1316, 1856, 2654, 2771, 2785
BstV2I	GAAGAC	3 cut(s)	1086, 1697, 2721
BstX2I	RGATCY	7 cut(s)	488, 523, 813, 891, 1078, 1540, 2683
BstXI	CCANNNNNNTGG	1 cut(s)	562
BstYI	RGATCY	7 cut(s)	488, 523, 813, 891, 1078, 1540, 2683
BstZ17I	GTATAC	1 cut(s)	1975
BstZI	CGGCCG	1 cut(s)	2768
Bsu36I	CCTNAGG	1 cut(s)	1224
BsuI	GTATCC	1 cut(s)	1002
BsuRI	GGCC	4 cut(s)	1616, 1735, 1830, 2770
BtgI	CCRYGG	2 cut(s)	132, 2423
BtrI	CACGTC	1 cut(s)	1992
BtsCI	GGATG	8 cut(s)	106, 165, 280, 1209, 1636, 1816, 2263, 2477
BtsI	GCAGTG	2 cut(s)	120, 438
BtsIMutI	CAGTG	7 cut(s)	116, 120, 438, 1033, 1104, 1930, 2258
Cac8I	GCNNGC	6 cut(s)	183, 580, 785, 1267, 1930, 2647
CaiI	CAGNNNCTG	1 cut(s)	2674
CciNI	GCGGCCGC	1 cut(s)	2768
Cfr13I	GGNCC	1 cut(s)	1883
Cfr9I	CCCGGG	1 cut(s)	65
CseI	GACGC	1 cut(s)	2277
Csp6I	GTAC	7 cut(s)	385, 709, 1127, 1420, 1511, 1810, 1912
CviAII	CATG	9 cut(s)	133, 753, 1598, 1960, 1969, 2117, 2212, 2235, 2424
CviQI	GTAC	7 cut(s)	385, 709, 1127, 1420, 1511, 1810, 1912
DraIII	CACNNNGTG	1 cut(s)	2132
EaeI	YGGCCR	2 cut(s)	1733, 2768
EagI	CGGCCG	1 cut(s)	2768
Eam1104I	CTCTTC	5 cut(s)	353, 471, 923, 1083, 1392
EarI	CTCTTC	5 cut(s)	353, 471, 923, 1083, 1392
EciI	GGCGGA	1 cut(s)	16
Ecl136II	GAGCTC	1 cut(s)	1145
EclXI	CGGCCG	1 cut(s)	2768
Eco105I	TACGTA	1 cut(s)	255
Eco130I	CCWWGG	2 cut(s)	132, 2423
Eco147I	AGGCCT	1 cut(s)	1830
Eco24I	GRGCYC	3 cut(s)	1147, 1742, 2251
Eco32I	GATATC	2 cut(s)	720, 2631
Eco47I	GGWCC	1 cut(s)	1883
Eco52I	CGGCCG	1 cut(s)	2768
Eco53kI	GAGCTC	1 cut(s)	1145
Eco57I	CTGAAG	5 cut(s)	1080, 2016, 2480, 2586, 2591
Eco72I	CACGTG	1 cut(s)	425
Eco81I	CCTNAGG	1 cut(s)	1224
Eco88I	CYCGRG	3 cut(s)	65, 392, 1805
EcoICRI	GAGCTC	1 cut(s)	1145
EcoRV	GATATC	2 cut(s)	720, 2631
EcoT14I	CCWWGG	2 cut(s)	132, 2423
EcoT38I	GRGCYC	3 cut(s)	1147, 1742, 2251
ErhI	CCWWGG	2 cut(s)	132, 2423
Esp3I	CGTCTC	1 cut(s)	2397
FaeI	CATG	9 cut(s)	136, 756, 1601, 1963, 1972, 2120, 2215, 2238, 2427
FaqI	GGGAC	4 cut(s)	1126, 1921, 2117, 2264
FatI	CATG	9 cut(s)	132, 752, 1597, 1959, 1968, 2116, 2211, 2234, 2423
FauI	CCCGC	2 cut(s)	174, 1274
FauNDI	CATATG	1 cut(s)	1051
FblI	GTMKAC	2 cut(s)	349, 1974
FokI	GGATG	8 cut(s)	113, 152, 287, 1196, 1643, 1803, 2270, 2484
FriOI	GRGCYC	3 cut(s)	1147, 1742, 2251
FspBI	CTAG	6 cut(s)	353, 923, 1533, 2561, 2615, 2646
HaeIII	GGCC	4 cut(s)	1616, 1735, 1830, 2770
HapII	CCGG	6 cut(s)	66, 817, 1822, 2292, 2465, 2575
HgaI	GACGC	1 cut(s)	2277
Hin1I	GRCGYC	2 cut(s)	2269, 2277
Hin1II	CATG	9 cut(s)	136, 756, 1601, 1963, 1972, 2120, 2215, 2238, 2427
HincII	GTYRAC	2 cut(s)	1021, 2172
HindII	GTYRAC	2 cut(s)	1021, 2172
HindIII	AAGCTT	1 cut(s)	1295
HpaII	CCGG	6 cut(s)	66, 817, 1822, 2292, 2465, 2575
HphI	GGTGA	8 cut(s)	65, 286, 1211, 1418, 2029, 2144, 2216, 2459
Hpy99I	CGWCG	2 cut(s)	1432, 2271
HpyAV	CCTTC	5 cut(s)	257, 691, 1606, 1841, 2357
HpyCH4IV	ACGT	8 cut(s)	254, 424, 999, 1125, 1416, 1910, 1991, 2277
HpySE526I	ACGT	8 cut(s)	254, 424, 999, 1125, 1416, 1910, 1991, 2277
Hsp92I	GRCGYC	2 cut(s)	2269, 2277
Hsp92II	CATG	9 cut(s)	136, 756, 1601, 1963, 1972, 2120, 2215, 2238, 2427
LmnI	GCTCC	6 cut(s)	1142, 1150, 1206, 1872, 2246, 2696
Lsp1109I	GCAGC	8 cut(s)	587, 980, 1226, 1316, 1856, 2654, 2771, 2785
LweI	GCATC	4 cut(s)	107, 369, 1058, 1218
MaeI	CTAG	6 cut(s)	353, 923, 1533, 2561, 2615, 2646
MaeII	ACGT	8 cut(s)	254, 424, 999, 1125, 1416, 1910, 1991, 2277
MbiI	CCGCTC	1 cut(s)	1404
MfeI	CAATTG	1 cut(s)	691
MflI	RGATCY	7 cut(s)	488, 523, 813, 891, 1078, 1540, 2683
MhlI	GDGCHC	5 cut(s)	1147, 1742, 1989, 2251, 2534
MluCI	AATT	7 cut(s)	190, 691, 1282, 1334, 1382, 1621, 2096
MlyI	GAGTC	7 cut(s)	65, 608, 1100, 1514, 2081, 2558, 2711
MmeI	TCCRAC	3 cut(s)	551, 986, 2524
MroXI	GAANNNNTTC	1 cut(s)	652
MseI	TTAA	9 cut(s)	1443, 1620, 1724, 2099, 2192, 2375, 2658, 2726, 2791
MslI	CAYNNNNRTG	4 cut(s)	125, 587, 2233, 2445
MspA1I	CMGCKG	2 cut(s)	869, 2784
MspI	CCGG	6 cut(s)	66, 817, 1822, 2292, 2465, 2575
MspR9I	CCNGG	5 cut(s)	66, 67, 818, 1822, 2293
MunI	CAATTG	1 cut(s)	691
Mva1269I	GAATGC	1 cut(s)	10
NciI	CCSGG	5 cut(s)	66, 67, 818, 1822, 2293
NcoI	CCATGG	2 cut(s)	132, 2423
NdeI	CATATG	1 cut(s)	1051
NheI	GCTAGC	1 cut(s)	2645
NlaIII	CATG	9 cut(s)	136, 756, 1601, 1963, 1972, 2120, 2215, 2238, 2427
NlaIV	GGNNCC	6 cut(s)	525, 815, 1542, 2046, 2248, 2685
NmeAIII	GCCGAG	1 cut(s)	1761
NmuCI	GTSAC	8 cut(s)	292, 1031, 1099, 1406, 1964, 2073, 2204, 2346
NotI	GCGGCCGC	1 cut(s)	2768
NspI	RCATGY	2 cut(s)	756, 1963
NspV	TTCGAA	1 cut(s)	2010
OliI	CACNNNNGTG	1 cut(s)	587
PaeR7I	CTCGAG	1 cut(s)	1805
PceI	AGGCCT	1 cut(s)	1830
PcsI	WCGNNNNNNNCGW	1 cut(s)	1436
PctI	GAATGC	1 cut(s)	10
PdmI	GAANNNNTTC	1 cut(s)	652
PflMI	CCANNNNNTGG	1 cut(s)	2693
PfoI	TCCNGGA	1 cut(s)	816
PleI	GAGTC	7 cut(s)	64, 607, 1099, 1514, 2080, 2557, 2711
PmaCI	CACGTG	1 cut(s)	425
PmlI	CACGTG	1 cut(s)	425
PpsI	GAGTC	7 cut(s)	64, 607, 1099, 1514, 2080, 2557, 2711
Ppu21I	YACGTR	3 cut(s)	255, 425, 1417
PshBI	ATTAAT	1 cut(s)	1620
Psp124BI	GAGCTC	1 cut(s)	1147
PspCI	CACGTG	1 cut(s)	425
PspN4I	GGNNCC	6 cut(s)	525, 815, 1542, 2046, 2248, 2685
PspPI	GGNCC	1 cut(s)	1883
PstI	CTGCAG	1 cut(s)	598
PstNI	CAGNNNCTG	1 cut(s)	2674
PsuI	RGATCY	7 cut(s)	488, 523, 813, 891, 1078, 1540, 2683
PvuII	CAGCTG	2 cut(s)	869, 2784
RsaI	GTAC	7 cut(s)	386, 710, 1128, 1421, 1512, 1811, 1913
RsaNI	GTAC	7 cut(s)	385, 709, 1127, 1420, 1511, 1810, 1912
RseI	CAYNNNNRTG	4 cut(s)	125, 587, 2233, 2445
SacI	GAGCTC	1 cut(s)	1147
SaqAI	TTAA	9 cut(s)	1443, 1620, 1724, 2099, 2192, 2375, 2658, 2726, 2791
Sau96I	GGNCC	1 cut(s)	1883
SchI	GAGTC	7 cut(s)	65, 608, 1100, 1514, 2081, 2558, 2711
ScrFI	CCNGG	5 cut(s)	66, 67, 818, 1822, 2293
SduI	GDGCHC	5 cut(s)	1147, 1742, 1989, 2251, 2534
SfaNI	GCATC	4 cut(s)	107, 369, 1058, 1218
SfcI	CTRYAG	2 cut(s)	484, 594
Sfr274I	CTCGAG	1 cut(s)	1805
SfuI	TTCGAA	1 cut(s)	2010
SinI	GGWCC	1 cut(s)	1883
SlaI	CTCGAG	1 cut(s)	1805
SmaI	CCCGGG	1 cut(s)	67
SmiMI	CAYNNNNRTG	4 cut(s)	125, 587, 2233, 2445
SmlI	CTYRAG	1 cut(s)	1805
SmoI	CTYRAG	1 cut(s)	1805
SnaBI	TACGTA	1 cut(s)	255
Sse9I	AATT	7 cut(s)	190, 691, 1282, 1334, 1382, 1621, 2096
SseBI	AGGCCT	1 cut(s)	1830
SspI	AATATT	1 cut(s)	2506
SspMI	CTAG	6 cut(s)	353, 923, 1533, 2561, 2615, 2646
SstI	GAGCTC	1 cut(s)	1147
StuI	AGGCCT	1 cut(s)	1830
StyD4I	CCNGG	5 cut(s)	64, 65, 816, 1820, 2291
StyI	CCWWGG	2 cut(s)	132, 2423
TaiI	ACGT	8 cut(s)	257, 427, 1002, 1128, 1419, 1913, 1994, 2280
TaqI	TCGA	7 cut(s)	22, 282, 735, 1806, 2010, 2266, 2501
TasI	AATT	7 cut(s)	190, 691, 1282, 1334, 1382, 1621, 2096
TatI	WGTACW	2 cut(s)	1419, 1809
TauI	GCSGC	3 cut(s)	188, 2770, 2773
Tru1I	TTAA	9 cut(s)	1443, 1620, 1724, 2099, 2192, 2375, 2658, 2726, 2791
Tru9I	TTAA	9 cut(s)	1443, 1620, 1724, 2099, 2192, 2375, 2658, 2726, 2791
TscAI	CASTG	7 cut(s)	116, 127, 438, 1040, 1104, 1930, 2258
TseFI	GTSAC	8 cut(s)	292, 1031, 1099, 1406, 1964, 2073, 2204, 2346
TseI	GCWGC	8 cut(s)	575, 993, 1239, 1329, 1844, 2642, 2773, 2784
Tsp45I	GTSAC	8 cut(s)	292, 1031, 1099, 1406, 1964, 2073, 2204, 2346
TspGWI	ACGGA	4 cut(s)	1788, 2121, 2210, 2466
TspMI	CCCGGG	1 cut(s)	65
TspRI	CASTG	7 cut(s)	116, 127, 438, 1040, 1104, 1930, 2258
Van91I	CCANNNNNTGG	1 cut(s)	2693
VneI	GTGCAC	1 cut(s)	1985
VpaK11BI	GGWCC	1 cut(s)	1883
VspI	ATTAAT	1 cut(s)	1620
XapI	RAATTY	1 cut(s)	1382
XbaI	TCTAGA	2 cut(s)	1532, 2614
XceI	RCATGY	2 cut(s)	756, 1963
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1624
XhoI	CTCGAG	1 cut(s)	1805
XmaI	CCCGGG	1 cut(s)	65
XmiI	GTMKAC	2 cut(s)	349, 1974
XmnI	GAANNNNTTC	1 cut(s)	652
XspI	CTAG	6 cut(s)	353, 923, 1533, 2561, 2615, 2646
ZraI	GACGTC	1 cut(s)	2278

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.