Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0005414

Physical Location & Seq

Genomic Coordinates Forward (+)

28476632 .. 28484319

Gene Structure 7688 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G322900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2829 bp

ATGGATCAACCACGTTCCGGTAATGGTGAGGAAAATGTTGGGATTCCGGATGATTTGCGATGCAAGAGATCAGATGGAAAACAGTGGAGGTGTACCGCTATGTCTATGCCAGATAAAACCGTGTGTGAAAAACACTATATCCAGGCAAAGAAGAGAGCAGCTAATTCTGCAATGCGAGCTAATTTGAAAAAAGCCAAGAGGAAATCGTTAGGTGAAACTGAAATTTACTTGGAGAGCAAGAGTGATGATTTTGATGTACCGCTTGCAAGCATGAAATCACAGGATAAAAAGTACATGGATAAGGCATCAAAAAATCATTTTCGCTATTCACCTGAGTCACCACCTACGAGGGGTTTATCCATGCGGAATCCTCCAAAACCAAATGATGAGAGAGACTTGGAACAGTACGAGGAAAGTTGGAGGTCTTATAAGTCACCACCTGTTTCTGCATTGGAATCATCCAGGAACAGACCACAGAGGAGTTTTGATGCTAATGCTATGACAGTATCGGAAGGCTCAGAATCCTCAGAAGAAACTGGTGGCCAAACTTGCCATCAGTGTCGGAGGAATGATAGGGACACAGTCATTTGGTGCCTCAGGTGTGATAGAAGAGGATACTGTGACAGCTGTATTTCAACATGGTACTCGGACATCCCATTAGAAGATATTCAGAGGTCTTGTCCTGCATGTCGTGGTACTTGTAATTGCAGAGTGTGCCTGCGTAGAGATAATTTGGTAAAGGTAAGGATAAGGGAGATCCCTGTTCTAGACAAGTTGCAATATCTCCACCGCCTGCTGTCTTCAGTACTTCCTATAGTTAAGCAAATCCATCAAGAACAGTGCTTTGAAGTAGAGCTCGAAAAAAAGCTTCGTGGAACCGATATAGATCTTGTCCGGACAAAATTGAATGCAGATGAGCAGATGTGCTGCAATTTCTGTAGGATTCCCATTATTGATTATCATTGGCACTGTTCCAATTGTGCATATGATGTATGCCTTCACTGTTGTCGAGATCTTCGAGAAGCATCTATGCCTGGCGTTGAAGGAGAAGTGGAAGATAACCAGATTAGTGAGAAAAGTCAAGAAAAAGAAACCAAGTTGCAGCAACCAAAACTGTCTAAAGTTAGACTAAATTTATCTGACAAGTTTTCTGACTGGAAAGCCAACAGTGATGGAAGTATTCCTTGCCCTCCAAAGGAGTATGGTGGCTGTGGTTATTCATCGTTGAATTTAAGCCGCATCTTTAAGATGAACTGGGTTGCAAAACTTGTCAAAAATGCAGAGGAGATGGTCAGTGGCTGTAGGGTTAATGACGCTGTCAGCGTAGAGAATTTTGGGCATGATGATCCAAGAATTTGCCAGTATGCTCATAGAGAGGACAACAATAATTTTTTGTACTGCCCTTCATCTGAAGATCTTAAATCTGATGGAATTGACCATTTTAAAAGGCATTGGCTCAGTGGTGAGCCCATCATTGTTAAGCAGGTGTTTGATAGCTCATCAATTTCAAGCTGGGATCCGATGGTTATATGGAAAGGGATTCGGGAGACAGCAGATGAGAAATTGAAGGATGAGGACAGAATGGTGAAGGCCATAGATTTCTTTGACTGGTCTGAGGTCGATGTTGAACTTGGTCAGTTCATCAAAGGGTACTCCGAGGGACGAATTAATGAAAATGGTTGCCCAGAAATGTTGAAATTAAAGGACTGGCCTTCTCCCAGCGCATCTGAAGAGTTCTTATTATATCAGAGACCTGAATTTATCAGCAAACTGCCTTTACTTGAGTTTATTCACTCCAAGTTTGGTCTTTTAAATGTTGCTGCAAAATTGCCACACTATTCTTTGCAAAATGACGTTGGACCTAAGATTTTTATGTCTTATGGGACCTATGAGGAACTTAGTGGAGGCAACTCCGTGACTAATCTCCATTTCAATATGCGTGACATGGTATATCTGCTGGTGCATGCATGTGAGGTGAAGCCAAAAGGTTTGCAGAAGACAAAGATTAAGAGCACACAAAAATCCTTGGAGGAATCTGAAGTTAAAGAATCACCTGGGGATCTGAAAATGGGTTTGGGAGAAGATACGAATCCTGATCTATCACTTCTTAGTCAGAGTGTTGAGAATGATTATGGGGCAAGGTCGGATACAGATAAAGATGAGAGTGTGGCAGATCATGGGCATGAAACTACTCCAACTGTTGAAGGGGACACCAGAAGTTGTGAACTGTCAGAAAGAGAGGGTGGAGATGTCTCTGAAAAAACTCATATGGGAGTTCTTTGGGATGTTTACCGTCGGAAGGATGTTCCAAAGTTGACCGAGTATCTGAGAATGCATTGGAAAGAATTTGGGAAGCTCAACAGTGAAACATATAATTTTGTAACGTGGCCCCTTTATGATGGAACATTGTTCCTGAATGGGTATCATAAAAGAAAACTGAAGGAAGAATTTGGAATTGAGCCATGGTCCTTTGAACAGCATTTGGGGCAAGCTGTTTTTATCCCTGCTGGATGCCCTTTTCAAGTCAGGAATCTTCAGTCAACTGTTCAGCTGGGTCTTGATTTCTTATCTCCTGAAAGCCTCGGTGAGGCTGTAAGACTAGCTGATGAAATCCGCTGTCTTCCAAATGACCATGAAGCAAAGCTGCAAGTGTTGGAGGTAGGAAAGATATCACTTTATGCAGCAAGTTCAGCTATTAAGGAGATTCAGAAATTGGTACTTGATCCAAAATTCGGCGCAGAGCTTGGATTTGAAGATCCAAATTTGACTGCAGCAGTTTCTGAGAATTTGGAGAAAATGATTAAGCGAAGACAGATCACTTGTACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000785 GO:0000976 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006325 GO:0006355 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008214 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016043 GO:0016569 GO:0016570 GO:0016577 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031326 GO:0031490 GO:0031974 GO:0031981 GO:0032451 GO:0032452 GO:0032454 GO:0033169 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0070076 GO:0070988 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:0140096 GO:1901363 GO:1901564 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03010 ko04714 map03010 map04714

Pfam Domains

Protein Families

JmjC WRC zf-4CXXC_R1

Protein Analysis

943

Amino Acids

107.58

Weight (kDa)

5.78

Isoelectric Point (pI)

47.11

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005414)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09060 AT1G09060 AT1G09060 AT1G09060
fragaria_vesca	FvH4_6g06290 FvH4_6g06290 FvH4_6g06290 FvH4_6g06290
malus_domestica	MD04G1202800.v1.1 MD12G1216600.v1.1
prunus_persica	Prupe.6G322900_v2.0.a1 Prupe.6G322900_v2.0.a1 Prupe.6G322900_v2.0.a1 Prupe.6G322900_v2.0.a1 Prupe.6G322900_v2.0.a1
pyrus_communis	pycom04g17890 pycom12g20210
rosa_chinensis	RchiOBHm_Chr3g0455331
rosa_laevigata	RLG00000025369
rosa_multiflora	Rmu_sc0002169.1_g000043
rosa_roxburghii	Rroxscaffold_6G00424370
rosa_rugosa	Rorug03G0006300 Rorug03G0006400 Rorug03G0006500
rosa_samantha	Rh3AG066100 Rh3BG068300 Rh3CG066700 Rh3DG068200
rosa_wichuraiana	Rw3G005210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	429
AarI	CACCTGC	1 cut(s)	1474
Acc36I	ACCTGC	1 cut(s)	1474
AccB1I	GGYRCC	1 cut(s)	591
AccIII	TCCGGA	2 cut(s)	46, 894
AciI	CCGC	6 cut(s)	96, 260, 364, 790, 1237, 2614
AclWI	GGATC	8 cut(s)	12, 751, 1340, 1511, 1524, 2067, 2717, 2750
AcoI	YGGCCR	1 cut(s)	541
AcuI	CTGAAG	6 cut(s)	786, 1431, 1749, 2058, 2459, 2519
AfiI	CCNNNNNNNGG	6 cut(s)	17, 350, 1195, 2299, 2587, 2732
AjnI	CCWGG	4 cut(s)	141, 461, 1033, 2053
AjuI	GAANNNNNNNTTGG	2 cut(s)	2057, 2089
Alw21I	GWGCWC	2 cut(s)	858, 2015
Alw26I	GTCTC	4 cut(s)	387, 1541, 1744, 2257
AlwI	GGATC	8 cut(s)	12, 751, 1340, 1511, 1524, 2067, 2717, 2750
AlwNI	CAGNNNCTG	2 cut(s)	1299, 2780
Aor13HI	TCCGGA	2 cut(s)	46, 894
AoxI	GGCC	4 cut(s)	541, 1590, 1709, 2387
ApeKI	GCWGC	7 cut(s)	158, 927, 1102, 1820, 2644, 2681, 2771
AseI	ATTAAT	1 cut(s)	1668
Asp700I	GAANNNNTTC	1 cut(s)	666
AspLEI	GCGC	2 cut(s)	1724, 2738
AspS9I	GGNCC	4 cut(s)	1859, 1884, 2388, 2466
AvaII	GGWCC	3 cut(s)	1859, 1884, 2466
AxyI	CCTNAGG	1 cut(s)	596
BalI	TGGCCA	1 cut(s)	543
BamHI	GGATCC	1 cut(s)	1516
BanI	GGYRCC	1 cut(s)	591
BanII	GRGCYC	2 cut(s)	858, 1470
BbsI	GAAGAC	4 cut(s)	792, 2003, 2612, 2815
Bbv12I	GWGCWC	2 cut(s)	858, 2015
BbvI	GCAGC	7 cut(s)	170, 914, 1114, 1807, 2631, 2693, 2783
BccI	CCATC	9 cut(s)	68, 561, 837, 1166, 1282, 1421, 1478, 1516, 2393
BciT130I	CCWGG	4 cut(s)	143, 463, 1035, 2055
BciVI	GTATCC	2 cut(s)	608, 2140
BcoDI	GTCTC	4 cut(s)	387, 1541, 1744, 2257
BfaI	CTAG	2 cut(s)	767, 2600
BfmI	CTRYAG	4 cut(s)	813, 937, 1300, 2769
BfuAI	ACCTGC	1 cut(s)	1474
BfuI	GTATCC	2 cut(s)	608, 2140
BglII	AGATCT	3 cut(s)	886, 1012, 1414
BisI	GCNGC	8 cut(s)	159, 928, 1103, 1237, 1821, 2645, 2682, 2772
BlsI	GCNGC	8 cut(s)	160, 929, 1104, 1238, 1822, 2646, 2683, 2773
BmcAI	AGTACT	1 cut(s)	807
Bme1390I	CCNGG	4 cut(s)	143, 463, 1035, 2055
Bme18I	GGWCC	3 cut(s)	1859, 1884, 2466
BmgT120I	GGNCC	4 cut(s)	1859, 1884, 2388, 2466
BmiI	GGNNCC	5 cut(s)	593, 877, 1518, 1885, 2390
BmrFI	CCNGG	4 cut(s)	143, 463, 1035, 2055
BmrI	ACTGGG	1 cut(s)	1264
BmsI	GCATC	7 cut(s)	50, 314, 478, 1034, 1248, 1733, 2501
BmuI	ACTGGG	1 cut(s)	1264
BpiI	GAAGAC	4 cut(s)	792, 2003, 2612, 2815
BpuEI	CTTGAG	1 cut(s)	1802
BsaBI	GATNNNNATC	2 cut(s)	885, 2088
BsaI	GGTCTC	1 cut(s)	1744
BsaJI	CCNNGG	5 cut(s)	1656, 2025, 2054, 2462, 2581
BsaWI	WCCGGW	3 cut(s)	17, 46, 894
Bsc4I	CCNNNNNNNGG	6 cut(s)	17, 350, 1195, 2299, 2587, 2732
Bse1I	ACTGG	6 cut(s)	541, 1160, 1259, 1360, 1613, 1712
Bse21I	CCTNAGG	1 cut(s)	596
Bse3DI	GCAATG	1 cut(s)	177
Bse8I	GATNNNNATC	2 cut(s)	885, 2088
BseAI	TCCGGA	2 cut(s)	46, 894
BseBI	CCWGG	4 cut(s)	143, 463, 1035, 2055
BseDI	CCNNGG	5 cut(s)	1656, 2025, 2054, 2462, 2581
BseGI	GGATG	7 cut(s)	55, 458, 651, 1576, 2290, 2308, 2516
BseJI	GATNNNNATC	2 cut(s)	885, 2088
BseLI	CCNNNNNNNGG	6 cut(s)	17, 350, 1195, 2299, 2587, 2732
BseMI	GCAATG	1 cut(s)	177
BseMII	CTCAG	8 cut(s)	324, 531, 540, 610, 1471, 1605, 2318, 2772
BseNI	ACTGG	6 cut(s)	541, 1160, 1259, 1360, 1613, 1712
BseRI	GAGGAG	2 cut(s)	493, 1298
BseXI	GCAGC	7 cut(s)	170, 914, 1114, 1807, 2631, 2693, 2783
BseYI	CCCAGC	3 cut(s)	1512, 1718, 2551
BshFI	GGCC	4 cut(s)	543, 1592, 1711, 2389
BshNI	GGYRCC	1 cut(s)	591
BsiHKAI	GWGCWC	2 cut(s)	858, 2015
BsiSI	CCGG	3 cut(s)	18, 47, 895
BslFI	GGGAC	4 cut(s)	590, 1674, 1897, 2222
BslI	CCNNNNNNNGG	6 cut(s)	17, 350, 1195, 2299, 2587, 2732
BsmAI	GTCTC	4 cut(s)	387, 1541, 1744, 2257
BsmFI	GGGAC	4 cut(s)	590, 1674, 1897, 2222
BsmI	GAATGC	2 cut(s)	913, 2337
BsnI	GGCC	4 cut(s)	543, 1592, 1711, 2389
Bso31I	GGTCTC	1 cut(s)	1744
Bsp1286I	GDGCHC	3 cut(s)	858, 1470, 2015
Bsp13I	TCCGGA	2 cut(s)	46, 894
Bsp19I	CCATGG	1 cut(s)	2462
BspACI	CCGC	6 cut(s)	96, 260, 364, 790, 1237, 2614
BspANI	GGCC	4 cut(s)	543, 1592, 1711, 2389
BspCNI	CTCAG	8 cut(s)	325, 530, 539, 609, 1470, 1606, 2319, 2773
BspEI	TCCGGA	2 cut(s)	46, 894
BspLI	GGNNCC	5 cut(s)	593, 877, 1518, 1885, 2390
BspMAI	CTGCAG	1 cut(s)	2773
BspMI	ACCTGC	1 cut(s)	1474
BspPI	GGATC	8 cut(s)	12, 751, 1340, 1511, 1524, 2067, 2717, 2750
BspT107I	GGYRCC	1 cut(s)	591
BspTNI	GGTCTC	1 cut(s)	1744
BsrDI	GCAATG	1 cut(s)	177
BsrI	ACTGG	6 cut(s)	541, 1160, 1259, 1360, 1613, 1712
BssECI	CCNNGG	5 cut(s)	1656, 2025, 2054, 2462, 2581
BssT1I	CCWWGG	2 cut(s)	2025, 2462
Bst2UI	CCWGG	4 cut(s)	143, 463, 1035, 2055
Bst6I	CTCTTC	3 cut(s)	146, 604, 1725
BstAPI	GCANNNNNTGC	1 cut(s)	714
BstC8I	GCNNGC	7 cut(s)	177, 264, 268, 719, 794, 1965, 2490
BstDSI	CCRYGG	1 cut(s)	2462
BstENI	CCTNNNNNAGG	1 cut(s)	2585
BstF5I	GGATG	7 cut(s)	55, 458, 651, 1576, 2290, 2308, 2516
BstHHI	GCGC	2 cut(s)	1724, 2738
BstMAI	GTCTC	4 cut(s)	387, 1541, 1744, 2257
BstMWI	GCNNNNNNNGC	6 cut(s)	167, 176, 549, 714, 2485, 2690
BstNI	CCWGG	4 cut(s)	143, 463, 1035, 2055
BstNSI	RCATGY	3 cut(s)	690, 1967, 1971
BstSCI	CCNGG	4 cut(s)	141, 461, 1033, 2053
BstSFI	CTRYAG	4 cut(s)	813, 937, 1300, 2769
BstV1I	GCAGC	7 cut(s)	170, 914, 1114, 1807, 2631, 2693, 2783
BstV2I	GAAGAC	4 cut(s)	792, 2003, 2612, 2815
BstX2I	RGATCY	7 cut(s)	756, 886, 1012, 1414, 1516, 2059, 2755
BstYI	RGATCY	7 cut(s)	756, 886, 1012, 1414, 1516, 2059, 2755
Bsu36I	CCTNAGG	1 cut(s)	596
BsuI	GTATCC	2 cut(s)	608, 2140
BsuRI	GGCC	4 cut(s)	543, 1592, 1711, 2389
BtgI	CCRYGG	1 cut(s)	2462
BtgZI	GCGATG	1 cut(s)	73
BtsCI	GGATG	7 cut(s)	55, 458, 651, 1576, 2290, 2308, 2516
BtsIMutI	CAGTG	9 cut(s)	89, 563, 845, 967, 1000, 1174, 1300, 1465, 2368
BveI	ACCTGC	1 cut(s)	1474
Cac8I	GCNNGC	7 cut(s)	177, 264, 268, 719, 794, 1965, 2490
CaiI	CAGNNNCTG	2 cut(s)	1299, 2780
CfoI	GCGC	2 cut(s)	1724, 2738
Cfr13I	GGNCC	4 cut(s)	1859, 1884, 2388, 2466
CseI	GACGC	1 cut(s)	1322
DraI	TTTAAA	2 cut(s)	1444, 1812
EaeI	YGGCCR	1 cut(s)	541
Eam1104I	CTCTTC	3 cut(s)	146, 604, 1725
EarI	CTCTTC	3 cut(s)	146, 604, 1725
Ecl136II	GAGCTC	1 cut(s)	856
Eco130I	CCWWGG	2 cut(s)	2025, 2462
Eco24I	GRGCYC	2 cut(s)	858, 1470
Eco31I	GGTCTC	1 cut(s)	1744
Eco32I	GATATC	1 cut(s)	2670
Eco47I	GGWCC	3 cut(s)	1859, 1884, 2466
Eco53kI	GAGCTC	1 cut(s)	856
Eco57I	CTGAAG	6 cut(s)	786, 1431, 1749, 2058, 2459, 2519
Eco81I	CCTNAGG	1 cut(s)	596
EcoICRI	GAGCTC	1 cut(s)	856
EcoNI	CCTNNNNNAGG	1 cut(s)	2585
EcoO109I	RGGNCCY	1 cut(s)	1884
EcoRII	CCWGG	4 cut(s)	141, 461, 1033, 2053
EcoRV	GATATC	1 cut(s)	2670
EcoT14I	CCWWGG	2 cut(s)	2025, 2462
EcoT22I	ATGCAT	2 cut(s)	1969, 2337
EcoT38I	GRGCYC	2 cut(s)	858, 1470
ErhI	CCWWGG	2 cut(s)	2025, 2462
FalI	AAGNNNNNCTT	2 cut(s)	1168, 1200
FaqI	GGGAC	4 cut(s)	590, 1674, 1897, 2222
FauNDI	CATATG	2 cut(s)	985, 2268
Fnu4HI	GCNGC	8 cut(s)	159, 928, 1103, 1237, 1821, 2645, 2682, 2772
FokI	GGATG	7 cut(s)	62, 445, 638, 1583, 2297, 2315, 2523
FriOI	GRGCYC	2 cut(s)	858, 1470
Fsp4HI	GCNGC	8 cut(s)	159, 928, 1103, 1237, 1821, 2645, 2682, 2772
FspBI	CTAG	2 cut(s)	767, 2600
GlaI	GCGC	2 cut(s)	1723, 2737
GluI	GCNGC	8 cut(s)	159, 928, 1103, 1237, 1821, 2645, 2682, 2772
GsaI	CCCAGC	3 cut(s)	1516, 1722, 2555
HaeIII	GGCC	4 cut(s)	543, 1592, 1711, 2389
HapII	CCGG	3 cut(s)	18, 47, 895
HgaI	GACGC	1 cut(s)	1322
HhaI	GCGC	2 cut(s)	1724, 2738
Hin6I	GCGC	2 cut(s)	1722, 2736
HinP1I	GCGC	2 cut(s)	1722, 2736
HincII	GTYRAC	2 cut(s)	2316, 2541
HindII	GTYRAC	2 cut(s)	2316, 2541
HindIII	AAGCTT	1 cut(s)	866
HpaII	CCGG	3 cut(s)	18, 47, 895
Hpy166II	GTNNAC	5 cut(s)	93, 2225, 2290, 2316, 2541
Hpy8I	GTNNAC	5 cut(s)	93, 2225, 2290, 2316, 2541
Hpy99I	CGWCG	1 cut(s)	2298
HpyCH4IV	ACGT	3 cut(s)	13, 1854, 2384
HpyF10VI	GCNNNNNNNGC	6 cut(s)	167, 176, 549, 714, 2485, 2690
HpySE526I	ACGT	3 cut(s)	13, 1854, 2384
HspAI	GCGC	2 cut(s)	1722, 2736
Kpn2I	TCCGGA	2 cut(s)	46, 894
Lsp1109I	GCAGC	7 cut(s)	170, 914, 1114, 1807, 2631, 2693, 2783
LweI	GCATC	7 cut(s)	50, 314, 478, 1034, 1248, 1733, 2501
MaeI	CTAG	2 cut(s)	767, 2600
MaeII	ACGT	3 cut(s)	13, 1854, 2384
MaeIII	GTNAC	6 cut(s)	336, 432, 620, 1915, 1940, 2380
MfeI	CAATTG	1 cut(s)	976
MflI	RGATCY	7 cut(s)	756, 886, 1012, 1414, 1516, 2059, 2755
MhlI	GDGCHC	3 cut(s)	858, 1470, 2015
MlsI	TGGCCA	1 cut(s)	543
MluNI	TGGCCA	1 cut(s)	543
MlyI	GAGTC	1 cut(s)	344
MmeI	TCCRAC	7 cut(s)	398, 542, 1837, 2124, 2219, 2276, 2634
Mox20I	TGGCCA	1 cut(s)	543
Mph1103I	ATGCAT	2 cut(s)	1969, 2337
MroI	TCCGGA	2 cut(s)	46, 894
MroXI	GAANNNNTTC	1 cut(s)	666
MscI	TGGCCA	1 cut(s)	543
MslI	CAYNNNNRTG	2 cut(s)	1968, 2181
Msp20I	TGGCCA	1 cut(s)	543
MspA1I	CMGCKG	3 cut(s)	627, 2551, 2616
MspI	CCGG	3 cut(s)	18, 47, 895
MspR9I	CCNGG	4 cut(s)	143, 463, 1035, 2055
MunI	CAATTG	1 cut(s)	976
Mva1269I	GAATGC	2 cut(s)	913, 2337
MvaI	CCWGG	4 cut(s)	143, 463, 1035, 2055
MwoI	GCNNNNNNNGC	6 cut(s)	167, 176, 549, 714, 2485, 2690
NcoI	CCATGG	1 cut(s)	2462
NdeI	CATATG	2 cut(s)	985, 2268
NlaIV	GGNNCC	5 cut(s)	593, 877, 1518, 1885, 2390
NmuCI	GTSAC	5 cut(s)	336, 432, 620, 1915, 1940
NsiI	ATGCAT	2 cut(s)	1969, 2337
NspI	RCATGY	3 cut(s)	690, 1967, 1971
PaeI	GCATGC	1 cut(s)	1967
PaqCI	CACCTGC	1 cut(s)	1474
PcsI	WCGNNNNNNNCGW	2 cut(s)	1015, 1320
PctI	GAATGC	2 cut(s)	913, 2337
PdmI	GAANNNNTTC	1 cut(s)	666
PflFI	GACNNNGTC	2 cut(s)	581, 1316
PfoI	TCCNGGA	1 cut(s)	461
PkrI	GCNGC	8 cut(s)	160, 929, 1104, 1238, 1822, 2646, 2683, 2773
PleI	GAGTC	1 cut(s)	343
PpsI	GAGTC	1 cut(s)	343
PpuMI	RGGWCCY	1 cut(s)	1884
PshBI	ATTAAT	1 cut(s)	1668
PsiI	TTATAA	1 cut(s)	429
Psp124BI	GAGCTC	1 cut(s)	858
Psp5II	RGGWCCY	1 cut(s)	1884
Psp6I	CCWGG	4 cut(s)	141, 461, 1033, 2053
PspFI	CCCAGC	3 cut(s)	1512, 1718, 2551
PspGI	CCWGG	4 cut(s)	141, 461, 1033, 2053
PspN4I	GGNNCC	5 cut(s)	593, 877, 1518, 1885, 2390
PspPI	GGNCC	4 cut(s)	1859, 1884, 2388, 2466
PspPPI	RGGWCCY	1 cut(s)	1884
PstI	CTGCAG	1 cut(s)	2773
PstNI	CAGNNNCTG	2 cut(s)	1299, 2780
PsuI	RGATCY	7 cut(s)	756, 886, 1012, 1414, 1516, 2059, 2755
PsyI	GACNNNGTC	2 cut(s)	581, 1316
PvuII	CAGCTG	2 cut(s)	627, 2551
RseI	CAYNNNNRTG	2 cut(s)	1968, 2181
SacI	GAGCTC	1 cut(s)	858
SatI	GCNGC	8 cut(s)	159, 928, 1103, 1237, 1821, 2645, 2682, 2772
Sau96I	GGNCC	4 cut(s)	1859, 1884, 2388, 2466
ScaI	AGTACT	1 cut(s)	807
SchI	GAGTC	1 cut(s)	344
ScrFI	CCNGG	4 cut(s)	143, 463, 1035, 2055
SduI	GDGCHC	3 cut(s)	858, 1470, 2015
SfaNI	GCATC	7 cut(s)	50, 314, 478, 1034, 1248, 1733, 2501
SfcI	CTRYAG	4 cut(s)	813, 937, 1300, 2769
SinI	GGWCC	3 cut(s)	1859, 1884, 2466
SmiMI	CAYNNNNRTG	2 cut(s)	1968, 2181
SmlI	CTYRAG	1 cut(s)	1781
SmoI	CTYRAG	1 cut(s)	1781
SphI	GCATGC	1 cut(s)	1967
SsiI	CCGC	6 cut(s)	96, 260, 364, 790, 1237, 2614
SspMI	CTAG	2 cut(s)	767, 2600
SstI	GAGCTC	1 cut(s)	858
StyD4I	CCNGG	4 cut(s)	141, 461, 1033, 2053
StyI	CCWWGG	2 cut(s)	2025, 2462
TaiI	ACGT	3 cut(s)	16, 1857, 2387
TaqI	TCGA	4 cut(s)	858, 1009, 1018, 1620
TaqII	GACCGA	1 cut(s)	2333
TatI	WGTACW	4 cut(s)	291, 805, 1395, 2822
TauI	GCSGC	1 cut(s)	1239
TscAI	CASTG	9 cut(s)	89, 563, 845, 974, 1007, 1174, 1300, 1465, 2368
TseFI	GTSAC	5 cut(s)	336, 432, 620, 1915, 1940
TseI	GCWGC	7 cut(s)	158, 927, 1102, 1820, 2644, 2681, 2771
Tsp45I	GTSAC	5 cut(s)	336, 432, 620, 1915, 1940
TspDTI	ATGAA	9 cut(s)	287, 1209, 1265, 1395, 1630, 1686, 2199, 2622, 2649
TspGWI	ACGGA	1 cut(s)	1903
TspRI	CASTG	9 cut(s)	89, 563, 845, 974, 1007, 1174, 1300, 1465, 2368
Tth111I	GACNNNGTC	2 cut(s)	581, 1316
VpaK11BI	GGWCC	3 cut(s)	1859, 1884, 2466
VspI	ATTAAT	1 cut(s)	1668
XagI	CCTNNNNNAGG	1 cut(s)	2585
XbaI	TCTAGA	1 cut(s)	766
XceI	RCATGY	3 cut(s)	690, 1967, 1971
XmnI	GAANNNNTTC	1 cut(s)	666
XspI	CTAG	2 cut(s)	767, 2600
ZrmI	AGTACT	1 cut(s)	807
Zsp2I	ATGCAT	2 cut(s)	1969, 2337

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.