Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0005414

Physical Location & Seq

Genomic Coordinates Reverse (-)

3599478 .. 3606566

Gene Structure 7089 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g06290.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2778 bp

ATGGACCTACGTTTAGGCCCTGGGAATGGCGAGGATAATCTTGGCATTCCTGATGATATGCGATGCAAGAGATCGGATGGGAAACAGTGGAGGTGCACGGCCAGGTCTATGCCAGATAAAACAGTATGTGAGAAGCACTATATCCAGGCAAAGAAGAGGGCAGCTAATTCTGCACTGCGCGCTAATATGAAAAAAGCCAAGAGAAAACCGTCAGGCGAAGGTGATCTTTTCTTGGAGAGTAAGAGTGATGATTTTGATGTGCCACTGGCAACTAAGAGTGATGATGTTGATGTGCCACTGGCAAGTATCAAATCAGAGGAGAAATCTCGTCCATCCCATGGGAAAAAGTTCACCAAGATATCAAAAAACCAGTTTCGTTATTCACCTGATCCACCGCCTATGAGAAGTGTGCCTAGGCGTAATCTTTCAAATGAAGAGAGAAAATCAGACGAGCATGAGGATGATTGGAGTTCTTATAAATCACCACCTGTTTCTGCTTTGGACTCACCCAGGAATAGGCCACAAAGAAGTTTTGATGCTAATGCTATGCCAGTTTCGGAATCCGCTGATGGAAGCTCAGAATCCTCTGAAGATGCTGGTGGTCAAACTTGCCATCAGTGCCGGAGGAAGGATGACACAGTCATCTGGTGCCACAGATGTGATAGACGAGGGTACTGTGATAGTTGTATTCGTACATGGTATTCAAACACCCCACCGGAAGATATTCAGAGCTCTTGTCCTGCATGTTCTGGTACCTGTAATTGCAAAGTGTGCCTTCGTAGAGACAATTTAGTAAAGGTAAGGATCAGAGAGATTCCTGCTCTAGACAAGTTGCAATATCTCCACTGTCTGCTGTCTTCCGTGCTCCCAGTGGTTAAGCAAATCCATCAAGAACAGTGCTTTGAAGTTGAACTCGAAAAAAAGCTTCGTGGAAGTGATATAGATCTTGCCAGGACAAAACTGAATGCAGATGAGCAGATGTGCTGCAATTTCTGTAGAATTCCCATCATTGATTATCATTGGCATTGTCCCGGTTGTGCTTATGATGTGTGCCTTAACTGCTGTCTTGATCTTCGAGAAGCATCTAAGCAAGTGGTCAAAGGAGAAGTGACAGAGGAGATTGATGATGAAAGTCAAGAAAAAGAAACCATGCTTGAGCAGTTTGCCAAAGTCAGACTAAATTTTTCGGAAAAGTTCCCTGACTGGAAAGCAAATAGTAATGGCAGTATTCCTTGCCCCCCAAAGGAGTATGGTGGCTGTGGATATTCAGCATTGAGTTTAAGTCGTATATTTAAGATGAACTGGGTTGCAAAGCTTGTCAAGAATGTAGAGGAAATGGTTAGTGGCTGTAGAGTTAATGATGCTGCCAGTCTTGCGCTCACTGAAGTTAATGATAAAAGACTTTGTCAGTATGCCCATAGAGAGGACAGTGACAATTTCTTGTACTGTCCTAGATCTGAGGATATTAAATGTGATGGGATTGCCACTTTTAAAAGACATTGGCTCAGGGGTGAGCCCATCATTGTAAAGCGGGTATTTGATAGCTCAACAGTTTCAAGCTGGGATCCTGCGGTTATATGGAGAGGGATTCAGGAAACAACAGATGAAAAATCGAAAGATCAAAACAGAATGGTGAAGGCTATCGATTGCTATGACTGGTCTGAGGTAGATATTGAGCTTGGTCACTTCATCGAAGGATACTCTGAGGGACAAATTTATGAAAATGGTCGGCCAAAGATTTTAAAATTGAGAGACTGGCCCTCTCCCAGTGCATCTGAAGAGTTTCTCTTGTATCAGAGACCTGAATTTATCAGGAAACTGCCTTTACTTGAGTATATCCACTCCAAGTTTGGTCTTTTAAATGTTGCTGCAAAATTGCCACATTATTCATTGCAAAATGATGTGGGACCTAAGATTTTCATATCTTATGGGACCCATGAGGAGCTTGATAAAGGCAATTCCGTGACCAATCTTCATTTCAACATGCGTGACATGGTCTATTTGCTGGTGCATGCATGTGTGGTGAAGCAAAAAGGTCAGCAGAAGACAAAAATTGAGAATGTGCAAAAACCCTTCGAGGCATCTGAGGTTAAAGAATCTCATGAGGATCTGGTAATGGGTGCTGGAGACAGTACATTCCCTGATCTATCAATAGATCAGAGTGAGGAAAATCCATATGAGGCAAGATTGGATACAGATAAAGTTGATAGTGCAGTTAATCATGGGCTTGAAACTACTCATGTTGAAATGAATACCATCAGTTGTGAACACTCAGAGAAAGAGGGTGATGATATCTCTCAAAAGACTCATCCGGGAGTTCTTTGGGATGTTTTCCGTCGAAAGGATGTTCCAAAGCTGACCGAGTATATAAGAATACATGGGGAAGAATTCGGGAAACTGAAGAGTGAAACAAATGACCTTGTGACAAGACCTCTTTATGATGAAACATGTTTCCTGAATGAACATCATAAAAGAAAATTGAAGGAAGAATTCGGGGTAGAGCCATGGTCCTTTGAACAGAATTTGGGGCAAGCGGTATTCATTCCTGCTGGATGCCCATTTCAAGTCAGGAATCTTCAGTCCACCGTTCAGCTGGGTCTTGATTTCTTATCTCCTGAAAGCCTCGGTGACGCCGCAAGACTGGCTGAAGAAATTCGCTGTCTTCCAAATGATCATGAAGCAAAGCAACAAGTGTCGGAGGTCGGACAAGGGAAATTTTACGTAGAAGTATTCCGTGCTATCCTCTCTTTTTCTTTTACTTGTACTTTTTCCTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000785 GO:0000976 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006325 GO:0006355 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008214 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016043 GO:0016569 GO:0016570 GO:0016577 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031326 GO:0031490 GO:0031974 GO:0031981 GO:0032451 GO:0032452 GO:0032454 GO:0033169 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0070076 GO:0070988 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:0140096 GO:1901363 GO:1901564 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03010 ko04714 map03010 map04714

Pfam Domains

Protein Families

JmjC WRC zf-4CXXC_R1

Protein Analysis

926

Amino Acids

105.46

Weight (kDa)

5.77

Isoelectric Point (pI)

50.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WRC	PF08879	17 - 57	2.3e-14	WRC
zf-4CXXC_R1	PF10497	199 - 265	2.2e-07	Zinc-finger domain of monoamine-oxidase A repressor R1
JmjC	PF02373	773 - 865	1e-07	JmjC domain, hydroxylase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005414)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09060 AT1G09060 AT1G09060 AT1G09060
fragaria_vesca	FvH4_6g06290 FvH4_6g06290 FvH4_6g06290 FvH4_6g06290
malus_domestica	MD04G1202800.v1.1 MD12G1216600.v1.1
prunus_persica	Prupe.6G322900_v2.0.a1 Prupe.6G322900_v2.0.a1 Prupe.6G322900_v2.0.a1 Prupe.6G322900_v2.0.a1 Prupe.6G322900_v2.0.a1
pyrus_communis	pycom04g17890 pycom12g20210
rosa_chinensis	RchiOBHm_Chr3g0455331
rosa_laevigata	RLG00000025369
rosa_multiflora	Rmu_sc0002169.1_g000043
rosa_roxburghii	Rroxscaffold_6G00424370
rosa_rugosa	Rorug03G0006300 Rorug03G0006400 Rorug03G0006500
rosa_samantha	Rh3AG066100 Rh3BG068300 Rh3CG066700 Rh3DG068200
rosa_wichuraiana	Rw3G005210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	477
Acc65I	GGTACC	1 cut(s)	752
AccB1I	GGYRCC	2 cut(s)	648, 752
AccB7I	CCANNNNNTGG	1 cut(s)	338
AccII	CGCG	1 cut(s)	180
AciI	CCGC	6 cut(s)	395, 564, 1531, 1571, 2534, 2634
AclWI	GGATC	5 cut(s)	383, 812, 1559, 1572, 2115
AcoI	YGGCCR	2 cut(s)	99, 1730
AcsI	RAATTY	9 cut(s)	999, 1180, 1713, 1805, 2387, 2489, 2521, 2652, 2714
AcuI	CTGAAG	6 cut(s)	609, 1404, 1797, 2420, 2561, 2667
AcyI	GRCGYC	1 cut(s)	2631
AfaI	GTAC	6 cut(s)	674, 694, 754, 1445, 2134, 2764
AfiI	CCNNNNNNNGG	7 cut(s)	26, 338, 516, 628, 1243, 1423, 2341
AflIII	ACRYGT	1 cut(s)	2447
AjnI	CCWGG	5 cut(s)	19, 101, 144, 509, 950
AjuI	GAANNNNNNNTTGG	2 cut(s)	1961, 1993
AleI	CACNNNNGTG	1 cut(s)	657
Alw21I	GWGCWC	3 cut(s)	98, 734, 867
Alw26I	GTCTC	4 cut(s)	777, 1746, 1792, 2121
Alw44I	GTGCAC	1 cut(s)	94
AlwI	GGATC	5 cut(s)	383, 812, 1559, 1572, 2115
AoxI	GGCC	5 cut(s)	16, 99, 518, 1730, 1757
ApaLI	GTGCAC	1 cut(s)	94
ApeKI	GCWGC	4 cut(s)	161, 984, 1364, 1868
ApoI	RAATTY	9 cut(s)	999, 1180, 1713, 1805, 2387, 2489, 2521, 2652, 2714
Asp700I	GAANNNNTTC	4 cut(s)	347, 723, 1782, 2652
Asp718I	GGTACC	1 cut(s)	752
AspA2I	CCTAGG	1 cut(s)	413
AspLEI	GCGC	3 cut(s)	180, 182, 1378
AspS9I	GGNCC	6 cut(s)	4, 17, 1758, 1907, 1932, 2508
AsuC2I	CCSGG	2 cut(s)	1032, 2313
AvaII	GGWCC	4 cut(s)	4, 1907, 1932, 2508
AvrII	CCTAGG	1 cut(s)	413
BaeGI	GKGCMC	1 cut(s)	98
BamHI	GGATCC	1 cut(s)	1564
BanI	GGYRCC	2 cut(s)	648, 752
BanII	GRGCYC	2 cut(s)	734, 1518
BbsI	GAAGAC	3 cut(s)	849, 2051, 2654
Bbv12I	GWGCWC	3 cut(s)	98, 734, 867
BbvI	GCAGC	4 cut(s)	173, 971, 1351, 1855
BccI	CCATC	9 cut(s)	71, 340, 563, 621, 894, 1013, 1469, 1526, 2264
BceAI	ACGGC	1 cut(s)	114
BciT130I	CCWGG	5 cut(s)	21, 103, 146, 511, 952
BciVI	GTATCC	2 cut(s)	1691, 2185
BclI	TGATCA	1 cut(s)	2671
BcnI	CCSGG	2 cut(s)	1032, 2313
BcoDI	GTCTC	4 cut(s)	777, 1746, 1792, 2121
BfaI	CTAG	3 cut(s)	414, 824, 1452
BfmI	CTRYAG	2 cut(s)	994, 1348
BfuI	GTATCC	2 cut(s)	1691, 2185
BglII	AGATCT	2 cut(s)	943, 1454
BisI	GCNGC	5 cut(s)	162, 985, 1365, 1869, 2634
BlnI	CCTAGG	1 cut(s)	413
BlsI	GCNGC	5 cut(s)	163, 986, 1366, 1870, 2635
Bme1390I	CCNGG	7 cut(s)	21, 103, 146, 511, 952, 1032, 2313
Bme18I	GGWCC	4 cut(s)	4, 1907, 1932, 2508
BmgT120I	GGNCC	6 cut(s)	4, 17, 1758, 1907, 1932, 2508
BmiI	GGNNCC	6 cut(s)	650, 754, 1566, 1908, 1933, 1934
BmrFI	CCNGG	7 cut(s)	21, 103, 146, 511, 952, 1032, 2313
BmrI	ACTGGG	3 cut(s)	863, 1312, 1761
BmsI	GCATC	8 cut(s)	53, 526, 583, 1091, 1351, 1781, 2090, 2543
BmuI	ACTGGG	3 cut(s)	863, 1312, 1761
BpiI	GAAGAC	3 cut(s)	849, 2051, 2654
BpmI	CTGGAG	1 cut(s)	2145
Bpu10I	CCTNAGC	1 cut(s)	1505
BpuEI	CTTGAG	2 cut(s)	1175, 1850
BpuMI	CCSGG	2 cut(s)	1032, 2313
Bsa29I	ATCGAT	1 cut(s)	1644
BsaAI	YACGTR	1 cut(s)	2722
BsaBI	GATNNNNATC	1 cut(s)	942
BsaHI	GRCGYC	1 cut(s)	2631
BsaI	GGTCTC	1 cut(s)	1792
BsaJI	CCNNGG	7 cut(s)	19, 20, 337, 413, 509, 2504, 2623
BsaWI	WCCGGW	1 cut(s)	715
Bsc4I	CCNNNNNNNGG	7 cut(s)	26, 338, 516, 628, 1243, 1423, 2341
Bse3DI	GCAATG	1 cut(s)	1889
Bse8I	GATNNNNATC	1 cut(s)	942
BseBI	CCWGG	5 cut(s)	21, 103, 146, 511, 952
BseCI	ATCGAT	1 cut(s)	1644
BseDI	CCNNGG	7 cut(s)	19, 20, 337, 413, 509, 2504, 2623
BseGI	GGATG	8 cut(s)	82, 332, 466, 637, 2308, 2332, 2350, 2558
BseJI	GATNNNNATC	1 cut(s)	942
BseLI	CCNNNNNNNGG	7 cut(s)	26, 338, 516, 628, 1243, 1423, 2341
BseMI	GCAATG	1 cut(s)	1889
BseMII	CTCAG	7 cut(s)	591, 1449, 1519, 1653, 1695, 2076, 2286
BsePI	GCGCGC	1 cut(s)	178
BseRI	GAGGAG	3 cut(s)	332, 1130, 1955
BseSI	GKGCMC	1 cut(s)	98
BseXI	GCAGC	4 cut(s)	173, 971, 1351, 1855
BseYI	CCCAGC	2 cut(s)	1560, 2593
BsgI	GTGCAG	2 cut(s)	156, 2232
Bsh1236I	CGCG	1 cut(s)	180
BshFI	GGCC	5 cut(s)	18, 101, 520, 1732, 1759
BshNI	GGYRCC	2 cut(s)	648, 752
BshVI	ATCGAT	1 cut(s)	1644
BsiHKAI	GWGCWC	3 cut(s)	98, 734, 867
BsiSI	CCGG	4 cut(s)	622, 716, 1032, 2312
BslFI	GGGAC	4 cut(s)	1014, 1722, 1920, 1945
BslI	CCNNNNNNNGG	7 cut(s)	26, 338, 516, 628, 1243, 1423, 2341
BsmAI	GTCTC	4 cut(s)	777, 1746, 1792, 2121
BsmFI	GGGAC	4 cut(s)	1014, 1722, 1920, 1945
BsmI	GAATGC	2 cut(s)	45, 970
BsnI	GGCC	5 cut(s)	18, 101, 520, 1732, 1759
Bso31I	GGTCTC	1 cut(s)	1792
Bsp1286I	GDGCHC	4 cut(s)	98, 734, 867, 1518
Bsp19I	CCATGG	2 cut(s)	337, 2504
BspACI	CCGC	6 cut(s)	395, 564, 1531, 1571, 2534, 2634
BspANI	GGCC	5 cut(s)	18, 101, 520, 1732, 1759
BspCNI	CTCAG	7 cut(s)	590, 1450, 1518, 1654, 1696, 2077, 2285
BspDI	ATCGAT	1 cut(s)	1644
BspFNI	CGCG	1 cut(s)	180
BspHI	TCATGA	2 cut(s)	2101, 2674
BspLI	GGNNCC	6 cut(s)	650, 754, 1566, 1908, 1933, 1934
BspPI	GGATC	5 cut(s)	383, 812, 1559, 1572, 2115
BspT107I	GGYRCC	2 cut(s)	648, 752
BspTNI	GGTCTC	1 cut(s)	1792
BsrDI	GCAATG	1 cut(s)	1889
BssECI	CCNNGG	7 cut(s)	19, 20, 337, 413, 509, 2504, 2623
BssHII	GCGCGC	1 cut(s)	178
BssNI	GRCGYC	1 cut(s)	2631
BssT1I	CCWWGG	3 cut(s)	337, 413, 2504
Bst2UI	CCWGG	5 cut(s)	21, 103, 146, 511, 952
Bst6I	CTCTTC	4 cut(s)	149, 429, 1773, 2396
BstACI	GRCGYC	1 cut(s)	2631
BstAPI	GCANNNNNTGC	1 cut(s)	771
BstBAI	YACGTR	1 cut(s)	2722
BstC8I	GCNNGC	3 cut(s)	180, 2013, 2532
BstDSI	CCRYGG	2 cut(s)	337, 2504
BstF5I	GGATG	8 cut(s)	82, 332, 466, 637, 2308, 2332, 2350, 2558
BstFNI	CGCG	1 cut(s)	180
BstHHI	GCGC	3 cut(s)	180, 182, 1378
BstMAI	GTCTC	4 cut(s)	777, 1746, 1792, 2121
BstMWI	GCNNNNNNNGC	7 cut(s)	170, 179, 618, 771, 1059, 1373, 2642
BstNI	CCWGG	5 cut(s)	21, 103, 146, 511, 952
BstNSI	RCATGY	5 cut(s)	747, 1987, 2015, 2019, 2451
BstSCI	CCNGG	7 cut(s)	19, 101, 144, 509, 950, 1030, 2311
BstSFI	CTRYAG	2 cut(s)	994, 1348
BstSLI	GKGCMC	1 cut(s)	98
BstSNI	TACGTA	1 cut(s)	2722
BstUI	CGCG	1 cut(s)	180
BstV1I	GCAGC	4 cut(s)	173, 971, 1351, 1855
BstV2I	GAAGAC	3 cut(s)	849, 2051, 2654
BstX2I	RGATCY	4 cut(s)	943, 1454, 1564, 2107
BstYI	RGATCY	4 cut(s)	943, 1454, 1564, 2107
Bsu15I	ATCGAT	1 cut(s)	1644
BsuI	GTATCC	2 cut(s)	1691, 2185
BsuRI	GGCC	5 cut(s)	18, 101, 520, 1732, 1759
BsuTUI	ATCGAT	1 cut(s)	1644
BtgI	CCRYGG	2 cut(s)	337, 2504
BtgZI	GCGATG	1 cut(s)	76
BtsCI	GGATG	8 cut(s)	82, 332, 466, 637, 2308, 2332, 2350, 2558
BtsI	GCAGTG	1 cut(s)	173
Cac8I	GCNNGC	3 cut(s)	180, 2013, 2532
CciI	TCATGA	2 cut(s)	2101, 2674
CfoI	GCGC	3 cut(s)	180, 182, 1378
Cfr13I	GGNCC	6 cut(s)	4, 17, 1758, 1907, 1932, 2508
ClaI	ATCGAT	1 cut(s)	1644
CseI	GACGC	1 cut(s)	2639
Csp6I	GTAC	6 cut(s)	673, 693, 753, 1444, 2133, 2763
CviQI	GTAC	6 cut(s)	673, 693, 753, 1444, 2133, 2763
DraI	TTTAAA	3 cut(s)	1492, 1743, 1860
EaeI	YGGCCR	2 cut(s)	99, 1730
Eam1104I	CTCTTC	4 cut(s)	149, 429, 1773, 2396
EarI	CTCTTC	4 cut(s)	149, 429, 1773, 2396
Ecl136II	GAGCTC	1 cut(s)	732
Eco105I	TACGTA	1 cut(s)	2722
Eco130I	CCWWGG	3 cut(s)	337, 413, 2504
Eco24I	GRGCYC	2 cut(s)	734, 1518
Eco31I	GGTCTC	1 cut(s)	1792
Eco32I	GATATC	2 cut(s)	360, 2293
Eco47I	GGWCC	4 cut(s)	4, 1907, 1932, 2508
Eco53kI	GAGCTC	1 cut(s)	732
Eco57I	CTGAAG	6 cut(s)	609, 1404, 1797, 2420, 2561, 2667
EcoICRI	GAGCTC	1 cut(s)	732
EcoO109I	RGGNCCY	3 cut(s)	17, 1907, 1932
EcoRI	GAATTC	3 cut(s)	999, 2387, 2489
EcoRII	CCWGG	5 cut(s)	19, 101, 144, 509, 950
EcoRV	GATATC	2 cut(s)	360, 2293
EcoT14I	CCWWGG	3 cut(s)	337, 413, 2504
EcoT22I	ATGCAT	1 cut(s)	2017
EcoT38I	GRGCYC	2 cut(s)	734, 1518
ErhI	CCWWGG	3 cut(s)	337, 413, 2504
FalI	AAGNNNNNCTT	4 cut(s)	210, 242, 759, 791
FaqI	GGGAC	4 cut(s)	1014, 1722, 1920, 1945
FauI	CCCGC	1 cut(s)	1524
FauNDI	CATATG	1 cut(s)	2176
FbaI	TGATCA	1 cut(s)	2671
Fnu4HI	GCNGC	5 cut(s)	162, 985, 1365, 1869, 2634
FokI	GGATG	8 cut(s)	89, 319, 473, 644, 2295, 2339, 2357, 2565
FriOI	GRGCYC	2 cut(s)	734, 1518
Fsp4HI	GCNGC	5 cut(s)	162, 985, 1365, 1869, 2634
FspBI	CTAG	3 cut(s)	414, 824, 1452
GlaI	GCGC	3 cut(s)	179, 181, 1377
GluI	GCNGC	5 cut(s)	162, 985, 1365, 1869, 2634
GsaI	CCCAGC	2 cut(s)	1564, 2597
GsuI	CTGGAG	1 cut(s)	2145
HaeIII	GGCC	5 cut(s)	18, 101, 520, 1732, 1759
HapII	CCGG	4 cut(s)	622, 716, 1032, 2312
HgaI	GACGC	1 cut(s)	2639
HhaI	GCGC	3 cut(s)	180, 182, 1378
Hin1I	GRCGYC	1 cut(s)	2631
Hin6I	GCGC	3 cut(s)	178, 180, 1376
HinP1I	GCGC	3 cut(s)	178, 180, 1376
HindIII	AAGCTT	2 cut(s)	923, 1313
HinfI	GANTC	8 cut(s)	503, 560, 581, 814, 1588, 2096, 2305, 2572
HpaII	CCGG	4 cut(s)	622, 716, 1032, 2312
Hpy166II	GTNNAC	4 cut(s)	96, 351, 2267, 2583
Hpy8I	GTNNAC	4 cut(s)	96, 351, 2267, 2583
Hpy99I	CGWCG	1 cut(s)	2340
HpyAV	CCTTC	7 cut(s)	212, 622, 785, 1630, 1688, 2083, 2476
HpyCH4IV	ACGT	2 cut(s)	10, 2721
HpyF10VI	GCNNNNNNNGC	7 cut(s)	170, 179, 618, 771, 1059, 1373, 2642
HpySE526I	ACGT	2 cut(s)	10, 2721
Hsp92I	GRCGYC	1 cut(s)	2631
HspAI	GCGC	3 cut(s)	178, 180, 1376
KflI	GGGWCCC	1 cut(s)	1932
KpnI	GGTACC	1 cut(s)	756
Ksp22I	TGATCA	1 cut(s)	2671
LmnI	GCTCC	2 cut(s)	870, 1942
Lsp1109I	GCAGC	4 cut(s)	173, 971, 1351, 1855
LweI	GCATC	8 cut(s)	53, 526, 583, 1091, 1351, 1781, 2090, 2543
MaeI	CTAG	3 cut(s)	414, 824, 1452
MaeII	ACGT	2 cut(s)	10, 2721
MaeIII	GTNAC	7 cut(s)	1108, 1430, 1682, 1963, 1988, 2422, 2627
MflI	RGATCY	4 cut(s)	943, 1454, 1564, 2107
MhlI	GDGCHC	4 cut(s)	98, 734, 867, 1518
MlyI	GAGTC	2 cut(s)	497, 2299
MmeI	TCCRAC	2 cut(s)	2676, 2683
Mph1103I	ATGCAT	1 cut(s)	2017
MroXI	GAANNNNTTC	4 cut(s)	347, 723, 1782, 2652
MslI	CAYNNNNRTG	3 cut(s)	459, 657, 2016
MspA1I	CMGCKG	2 cut(s)	566, 2593
MspI	CCGG	4 cut(s)	622, 716, 1032, 2312
MspR9I	CCNGG	7 cut(s)	21, 103, 146, 511, 952, 1032, 2313
Mva1269I	GAATGC	2 cut(s)	45, 970
MvaI	CCWGG	5 cut(s)	21, 103, 146, 511, 952
MvnI	CGCG	1 cut(s)	180
MwoI	GCNNNNNNNGC	7 cut(s)	170, 179, 618, 771, 1059, 1373, 2642
NciI	CCSGG	2 cut(s)	1032, 2313
NcoI	CCATGG	2 cut(s)	337, 2504
NdeI	CATATG	1 cut(s)	2176
NlaIV	GGNNCC	6 cut(s)	650, 754, 1566, 1908, 1933, 1934
NmuCI	GTSAC	7 cut(s)	1108, 1430, 1682, 1963, 1988, 2422, 2627
NsiI	ATGCAT	1 cut(s)	2017
NspI	RCATGY	5 cut(s)	747, 1987, 2015, 2019, 2451
OliI	CACNNNNGTG	1 cut(s)	657
PaeI	GCATGC	1 cut(s)	2015
PagI	TCATGA	2 cut(s)	2101, 2674
PasI	CCCWGGG	1 cut(s)	20
PauI	GCGCGC	1 cut(s)	178
PciI	ACATGT	1 cut(s)	2447
PctI	GAATGC	2 cut(s)	45, 970
PdmI	GAANNNNTTC	4 cut(s)	347, 723, 1782, 2652
PfeI	GAWTC	6 cut(s)	560, 581, 814, 1588, 2096, 2572
PflFI	GACNNNGTC	3 cut(s)	638, 1404, 1994
PflMI	CCANNNNNTGG	1 cut(s)	338
PfoI	TCCNGGA	1 cut(s)	2311
PkrI	GCNGC	5 cut(s)	163, 986, 1366, 1870, 2635
PleI	GAGTC	2 cut(s)	497, 2299
PpsI	GAGTC	2 cut(s)	497, 2299
Ppu21I	YACGTR	1 cut(s)	2722
PpuMI	RGGWCCY	2 cut(s)	1907, 1932
PscI	ACATGT	1 cut(s)	2447
PsiI	TTATAA	1 cut(s)	477
Psp124BI	GAGCTC	1 cut(s)	734
Psp5II	RGGWCCY	2 cut(s)	1907, 1932
Psp6I	CCWGG	5 cut(s)	19, 101, 144, 509, 950
PspFI	CCCAGC	2 cut(s)	1560, 2593
PspGI	CCWGG	5 cut(s)	19, 101, 144, 509, 950
PspN4I	GGNNCC	6 cut(s)	650, 754, 1566, 1908, 1933, 1934
PspPI	GGNCC	6 cut(s)	4, 17, 1758, 1907, 1932, 2508
PspPPI	RGGWCCY	2 cut(s)	1907, 1932
PsuI	RGATCY	4 cut(s)	943, 1454, 1564, 2107
PsyI	GACNNNGTC	3 cut(s)	638, 1404, 1994
PteI	GCGCGC	1 cut(s)	178
PvuII	CAGCTG	1 cut(s)	2593
RsaI	GTAC	6 cut(s)	674, 694, 754, 1445, 2134, 2764
RsaNI	GTAC	6 cut(s)	673, 693, 753, 1444, 2133, 2763
RseI	CAYNNNNRTG	3 cut(s)	459, 657, 2016
SacI	GAGCTC	1 cut(s)	734
SatI	GCNGC	5 cut(s)	162, 985, 1365, 1869, 2634
Sau96I	GGNCC	6 cut(s)	4, 17, 1758, 1907, 1932, 2508
SchI	GAGTC	2 cut(s)	497, 2299
ScrFI	CCNGG	7 cut(s)	21, 103, 146, 511, 952, 1032, 2313
SduI	GDGCHC	4 cut(s)	98, 734, 867, 1518
SfaNI	GCATC	8 cut(s)	53, 526, 583, 1091, 1351, 1781, 2090, 2543
SfcI	CTRYAG	2 cut(s)	994, 1348
SinI	GGWCC	4 cut(s)	4, 1907, 1932, 2508
SmiMI	CAYNNNNRTG	3 cut(s)	459, 657, 2016
SmlI	CTYRAG	2 cut(s)	1154, 1829
SmoI	CTYRAG	2 cut(s)	1154, 1829
SnaBI	TACGTA	1 cut(s)	2722
SphI	GCATGC	1 cut(s)	2015
SsiI	CCGC	6 cut(s)	395, 564, 1531, 1571, 2534, 2634
SspMI	CTAG	3 cut(s)	414, 824, 1452
SstI	GAGCTC	1 cut(s)	734
StyD4I	CCNGG	7 cut(s)	19, 101, 144, 509, 950, 1030, 2311
StyI	CCWWGG	3 cut(s)	337, 413, 2504
TaiI	ACGT	2 cut(s)	13, 2724
TaqI	TCGA	7 cut(s)	915, 1075, 1613, 1644, 1692, 2076, 2338
TaqII	GACCGA	1 cut(s)	2375
TatI	WGTACW	3 cut(s)	1443, 2132, 2762
TauI	GCSGC	1 cut(s)	2636
TfiI	GAWTC	6 cut(s)	560, 581, 814, 1588, 2096, 2572
TseFI	GTSAC	7 cut(s)	1108, 1430, 1682, 1963, 1988, 2422, 2627
TseI	GCWGC	4 cut(s)	161, 984, 1364, 1868
Tsp45I	GTSAC	7 cut(s)	1108, 1430, 1682, 1963, 1988, 2422, 2627
TspGWI	ACGGA	4 cut(s)	850, 1951, 2324, 2723
Tth111I	GACNNNGTC	3 cut(s)	638, 1404, 1994
Van91I	CCANNNNNTGG	1 cut(s)	338
VneI	GTGCAC	1 cut(s)	94
VpaK11BI	GGWCC	4 cut(s)	4, 1907, 1932, 2508
XapI	RAATTY	9 cut(s)	999, 1180, 1713, 1805, 2387, 2489, 2521, 2652, 2714
XbaI	TCTAGA	1 cut(s)	823
XceI	RCATGY	5 cut(s)	747, 1987, 2015, 2019, 2451
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1847, 2590
XmaJI	CCTAGG	1 cut(s)	413
XmnI	GAANNNNTTC	4 cut(s)	347, 723, 1782, 2652
XspI	CTAG	3 cut(s)	414, 824, 1452
Zsp2I	ATGCAT	1 cut(s)	2017

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.