Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008061

Physical Location & Seq

Genomic Coordinates Forward (+)

3310930 .. 3322269

Gene Structure 11340 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G10130.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2997 bp

ATGGAAGACGCCTACGCCAGATCTGTCTCAGAGGTGCTTGATTTCTTTGGGGTAGACCCAACAAAGGGTCTTTCTGATTCTCAGGTTGTTCATCATTCCAGGCTTTATGGCAGGAATGTACTGCCTGAAGAGAAAAGAACGCCATTCTGGAAACTGGTTCTGAAACAGTTTGATGATTTACTTGTCAAGATATTGATTGTGGCTGCAATTGTTTCTTTCGTATTGGCTTTGGCTAATGGAGAGACTGGTTTAACAGCATTTCTGGAGCCTTTTGTCATTCTGCTGATATTGGCTGCAAATGCGGCAGTGGGGGTGATCACGGAGACTAATGCTGAGAAGGCTCTTGAGGAGCTACGTGCCTACCAAGCAAATATAGCTACAGTGTTGCGAAATGGGTGCTTCTCTATCCTACCAGCAACAGAGCTGGTTCCAGGCGACATTGTTGAAGTTACTGTGGGATGTAAGATTCCAGCTGACCTGAGGATGATTGAGATGTCTAGCAATACGTTTCGAGTTGATCAAGCCATTCTAACTGGTGAAAGCTGTTCCGTGGAAAAAGATGTTGACTGTACTTTAACAACAAATGCTGTCTACCAAGACAAGAAAAATATTTTATTTTCGGGAACTGATGTGGTCGCGGGTAGGGGAAGGGCTGTTGTCATTGGAGTTGGTTCAAACACCGCAATGGGTAGCATACACGATTCTATGTTGCAGACAGATGATGAGGCAACTCCATTGAAAAAGAAGCTGGACGAGTTTGGCAGCTTTTTGGCTAAGGTAATTGCGGGTATTTGTGTACTTGTGTGGGTTGTCAACATTGGTCACTTCAGTGACCCTTCTCATGGTGGATTTTTTAAAGGCGCAATTCACTATTTTAAGATTGCAGTTGCCCTTGCTGTTGCAGCTATTCCTGAAGGACTTCCTGCTGTCGTGACAACGTGTTTAGCTCTTGGAACAAAGAAAATGGCTCGTTTGAATGCTATTGTACGGTCATTACCATCTGTCGAGACGCTTGGGTGCACTACTGTAATTTGCAGTGACAAGACTGGAACATTGACAACCAATATGATGTCGGTGTCTAAGATATGTGTAGTCCAATCTGCAGAGCATGGTCCTATGATTAATGAATTCACTGTTAGTGGGACAACTTATGCACCAGAAGGTACCGTCTTTGACAGCAATGGGATGCAGCTTGACTTACCTGCTCAGTCACCTTGCCTTCATCATTTAGCAATGTGTTCATCACTCTGCAATGACTCCATCTTGCAATACAATCCAGATAAGGATTCTTATGAAAAAATTGGAGAGTCAACTGAAGTTGCTCTTCGAGTTCTTGCAGAAAAGGTTGGGCTCCCTGGTTTTGATTCAATGCCTTCTGCTCTAAACATGTTGAGCAAGCATGAACGTGCATCATATTGCAACCATTATTGGGAAAACCAATTCAAAAAGGTTTATGTTTTGGAGTTTACTCGTGACCGAAAAATGATGAGCGTCCTATGTAGCCATAAGCAAATGGATGTTATGTTCTCAAAGGGTGCTCCAGAGAGTATAATAGCTAGGTGTAATAAAATTCTCTGCAACGGTGATGGTTCTGTTGTTCCTCTAACTGCTGCTGGCCGTGCAGAGCTTGAGTCGAGGTTTTACAGTTTTGGCGATGAAACATTGAGATGCTTAGCATTAGCATTTAAGACCGTGCCCCACGGTCAACAAACTATTTCCTATGATAATGAGAACGACCTGACGTTTATTGGGTTGGTGGGAATGCTTGATCCACCAAGAGAAGAAGTGAGAGATGCTATGCTTGCGTGTATGACTGCTGGGATACGTGTTATAGTTGTTACTGGGGATAACAAGTCCACAGCAGAGTCACTATGTAGAAAAATAGGGGCTTTTGACAATCTGGTAGACTTTTCTGGTATGTCCTACACCGCTTCTGAATTTGAACGGCTTCCAGCAGTGCAGCAAACTCTAGCATTGCGACGGATGACACTTTTTTCCAGGGTTGAACCTTCCCACAAAAGGATGCTTGTTGAAGCCCTACAGAAACAAAACGAAGTGGTGGCAATGACTGGTGATGGCGTTAATGATGCCCCTGCATTGAAGAAAGCTGACATTGGGATTGCCATGGGTTCTGGAACAGCTGTAGCAAAGAGTGCTTCAGATATGGTTTTGGCTGATGATAATTTTGCTTCAATAGTTGCGGCTGTTGCAGAAGGAAGGGCTATATATAATAACACAAAGCAATTCATTAGATACATGATTTCTTCAAATATAGGGGAAGTGGTCTGTATATTTGTTGCAGCTGTACTGGGAATCCCTGATACCTTGGCACCTGTTCAACTTCTGTGGGTCAATTTGGTAACAGATGGATTGCCTGCCACTGCCATTGGCTTTAATAAACAAGATTCCGATGTTATGAAGGCAAAACCCCGAAAGGTTGGTGAAGCAGTGGTCACTGGGTGGTTATTCTTCCGCTATTTGGTTATCGGAGTTTATGTCGGCCTGGCCACTGTTGCTGGCTTTATATGGTGGTTTGTTTACTCTGATGGTGGTCCTAAACTTACTTACAGTGAACTGATGAACTTTGAAACTTGCGCACTTAGAGAGACAACTTATCCCTGCAGCATATTTGAGGATCGGCACCCATCTACTGTGGCTATGACAGTACTTGTTGTTGTCGAGATGTTTAATGCTCTAAATAACCTCAGCGAAAATCAATCCCTTCTGGTTATAACCCCAAGGAGTAACTTATGGCTTGTTGGTTCAATTATCCTGACGATGCTTCTGCACGTGCTAATATTATATGTTCATCCACTGGCAGTCTTATTTTCTGTCACGCCATTATCCTGGGCCGAGTGGACTGCTGTTCTGTATCTTTCGTTTCCAGTTATCATCATCGATGAGCTTCTGAAGTTCCTCTCTAGAAATACAGGCATGAGATTCAGGTTCAGATTGAGGAAGGCTGATTTACTCCCCAAGGACCGGCGTGACAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0003674 GO:0003824 GO:0005215 GO:0005384 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006828 GO:0007275 GO:0008150 GO:0008324 GO:0012505 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015410 GO:0015662 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022622 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0034220 GO:0042592 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0046915 GO:0048364 GO:0048731 GO:0048856 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055065 GO:0055071 GO:0055076 GO:0055080 GO:0055085 GO:0065007 GO:0065008 GO:0070588 GO:0070838 GO:0071421 GO:0072511 GO:0090662 GO:0097708 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:0098791 GO:0099131 GO:0099132 GO:0099402

KEGG Pathways

Metabolic & Signaling

ko04020 ko04022 ko04972 ko05010 map04020 map04022 map04972 map05010

Pfam Domains

Protein Families

Cation_ATPase Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase Hydrolase_3

Protein Analysis

998

Amino Acids

109.06

Weight (kDa)

5.76

Isoelectric Point (pI)

35.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cation_ATPase_N	PF00690	5 - 72	2.3e-20	Cation transporter/ATPase, N-terminus
E1-E2_ATPase	PF00122	122 - 236	1e-23	P-type ATPase actuator domain
Cation_ATPase	PF13246	407 - 595	2.8e-43	P-type ATPase, cytoplasmic domain N
Hydrolase	PF00702	581 - 704	3.5e-14	haloacid dehalogenase-like hydrolase
Hydrolase_3	PF08282	676 - 733	2.5e-06	haloacid dehalogenase-like hydrolase
Cation_ATPase_C	PF00689	775 - 973	4.7e-46	Cation transporting ATPase, C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0008061)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10130
fragaria_vesca	FvH4_2g32870 FvH4_2g32870 FvH4_2g32870
malus_domestica	MD08G1080200.v1.1 MD15G1067300.v1.1
prunus_persica	Prupe.1G421100_v2.0.a1 Prupe.1G421100_v2.0.a1 Prupe.1G421100_v2.0.a1 Prupe.1G421100_v2.0.a1 Prupe.1G421100_v2.0.a1
pyrus_communis	pycom08g06620 pycom15g06380
rosa_chinensis	RchiOBHm_Chr6g0309841
rosa_laevigata	RLG00000010530
rosa_multiflora	Rmu_ssc0000373.1_g000002
rosa_roxburghii	Rroxscaffold_7G00159130
rosa_rugosa	Rorug06G0375200 Rorug06G0375300
rosa_samantha	Rh6AG488700 Rh6BG498200 Rh6CG503000 Rh6DG489200
rosa_wichuraiana	Rw6G042560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2732
Acc16I	TGCGCA	1 cut(s)	2596
Acc36I	ACCTGC	1 cut(s)	1210
Acc65I	GGTACC	1 cut(s)	1163
AccB1I	GGYRCC	3 cut(s)	1163, 2329, 2640
AccI	GTMKAC	3 cut(s)	54, 591, 1905
AccII	CGCG	1 cut(s)	638
AciI	CCGC	7 cut(s)	302, 638, 681, 785, 1929, 2201, 2473
AclWI	GGATC	2 cut(s)	1763, 2643
AcoI	YGGCCR	2 cut(s)	1615, 2505
AcsI	RAATTY	3 cut(s)	1127, 1569, 1937
AcuI	CTGAAG	6 cut(s)	147, 811, 933, 1335, 2142, 2930
AcvI	CACGTG	1 cut(s)	2791
AcyI	GRCGYC	1 cut(s)	9
AdeI	CACNNNGTG	1 cut(s)	2460
AfaI	GTAC	7 cut(s)	120, 571, 798, 987, 1165, 2307, 2667
AfiI	CCNNNNNNNGG	7 cut(s)	64, 65, 842, 1429, 2019, 2479, 2982
AflIII	ACRYGT	3 cut(s)	938, 1386, 1825
AjnI	CCWGG	6 cut(s)	98, 430, 1354, 1997, 2502, 2846
AleI	CACNNNNGTG	1 cut(s)	828
AloI	GAACNNNNNNTCC	2 cut(s)	1508, 1540
Alw21I	GWGCWC	2 cut(s)	1022, 1540
Alw26I	GTCTC	5 cut(s)	31, 236, 317, 1001, 2600
Alw44I	GTGCAC	1 cut(s)	1018
AlwI	GGATC	2 cut(s)	1763, 2643
AoxI	GGCC	4 cut(s)	1615, 2500, 2505, 2850
ApaLI	GTGCAC	1 cut(s)	1018
ApeKI	GCWGC	9 cut(s)	203, 293, 762, 902, 1189, 1610, 1960, 2300, 2622
ApoI	RAATTY	3 cut(s)	1127, 1569, 1937
AseI	ATTAAT	1 cut(s)	1122
Asp700I	GAANNNNTTC	2 cut(s)	918, 1947
Asp718I	GGTACC	1 cut(s)	1163
AspLEI	GCGC	2 cut(s)	863, 2597
AspS9I	GGNCC	4 cut(s)	1112, 2552, 2850, 2980
AsuHPI	GGTGA	6 cut(s)	325, 548, 1203, 1595, 2084, 2453
AvaII	GGWCC	3 cut(s)	1112, 2552, 2980
AxyI	CCTNAGG	1 cut(s)	479
BaeGI	GKGCMC	2 cut(s)	1022, 1698
BalI	TGGCCA	1 cut(s)	2507
BanI	GGYRCC	3 cut(s)	1163, 2329, 2640
BanII	GRGCYC	1 cut(s)	1353
BauI	CACGAG	1 cut(s)	1470
BbrPI	CACGTG	1 cut(s)	2791
BbsI	GAAGAC	1 cut(s)	12
Bbv12I	GWGCWC	2 cut(s)	1022, 1540
BbvCI	CCTCAGC	1 cut(s)	2705
BbvI	GCAGC	9 cut(s)	190, 280, 774, 914, 1201, 1597, 1972, 2312, 2634
BccI	CCATC	7 cut(s)	1006, 1268, 1580, 2069, 2360, 2540, 2653
BceAI	ACGGC	2 cut(s)	1602, 1961
BcgI	CGANNNNNNTGC	6 cut(s)	378, 412, 2767, 2801, 2843, 2877
BciT130I	CCWGG	6 cut(s)	100, 432, 1356, 1999, 2504, 2848
BciVI	GTATCC	1 cut(s)	1815
BclI	TGATCA	2 cut(s)	315, 517
BcoDI	GTCTC	5 cut(s)	31, 236, 317, 1001, 2600
BfaI	CTAG	4 cut(s)	498, 1557, 1970, 2922
BfmI	CTRYAG	5 cut(s)	378, 1101, 2039, 2142, 2620
BfuAI	ACCTGC	1 cut(s)	1210
BfuI	GTATCC	1 cut(s)	1815
BglII	AGATCT	1 cut(s)	20
BlpI	GCTNAGC	1 cut(s)	1672
BmcAI	AGTACT	1 cut(s)	2667
Bme1390I	CCNGG	6 cut(s)	100, 432, 1356, 1999, 2504, 2848
Bme18I	GGWCC	3 cut(s)	1112, 2552, 2980
BmgT120I	GGNCC	4 cut(s)	1112, 2552, 2850, 2980
BmiI	GGNNCC	6 cut(s)	267, 429, 1165, 1352, 2331, 2642
BmrFI	CCNGG	6 cut(s)	100, 432, 1356, 1999, 2504, 2848
BmrI	ACTGGG	3 cut(s)	1851, 2318, 2466
BmsI	GCATC	7 cut(s)	1176, 1418, 1658, 1783, 2013, 2077, 2769
BmuI	ACTGGG	3 cut(s)	1851, 2318, 2466
BpiI	GAAGAC	1 cut(s)	12
BpmI	CTGGAG	2 cut(s)	284, 1524
Bpu10I	CCTNAGC	2 cut(s)	774, 2705
Bpu1102I	GCTNAGC	1 cut(s)	1672
BpuEI	CTTGAG	2 cut(s)	365, 1649
Bsa29I	ATCGAT	1 cut(s)	2898
BsaAI	YACGTR	3 cut(s)	356, 1826, 2791
BsaHI	GRCGYC	1 cut(s)	9
BsaJI	CCNNGG	9 cut(s)	549, 1354, 1699, 1998, 2124, 2325, 2738, 2847, 2976
BsaXI	ACNNNNNCTCC	2 cut(s)	2481, 2511
Bsc4I	CCNNNNNNNGG	7 cut(s)	64, 65, 842, 1429, 2019, 2479, 2982
Bse118I	RCCGGY	1 cut(s)	2982
Bse21I	CCTNAGG	1 cut(s)	479
Bse3DI	GCAATG	6 cut(s)	690, 1186, 1239, 1258, 1973, 2070
BseBI	CCWGG	6 cut(s)	100, 432, 1356, 1999, 2504, 2848
BseCI	ATCGAT	1 cut(s)	2898
BseDI	CCNNGG	9 cut(s)	549, 1354, 1699, 1998, 2124, 2325, 2738, 2847, 2976
BseGI	GGATG	7 cut(s)	464, 489, 1191, 1522, 1989, 2028, 2809
BseLI	CCNNNNNNNGG	7 cut(s)	64, 65, 842, 1429, 2019, 2479, 2982
BseMI	GCAATG	6 cut(s)	690, 1186, 1239, 1258, 1973, 2070
BseMII	CTCAG	6 cut(s)	42, 95, 324, 470, 1220, 2719
BseRI	GAGGAG	1 cut(s)	362
BseSI	GKGCMC	2 cut(s)	1022, 1698
BseXI	GCAGC	9 cut(s)	190, 280, 774, 914, 1201, 1597, 1972, 2312, 2634
BseYI	CCCAGC	1 cut(s)	1817
BsgI	GTGCAG	3 cut(s)	1641, 1979, 2771
Bsh1236I	CGCG	1 cut(s)	638
BshFI	GGCC	4 cut(s)	1617, 2502, 2507, 2852
BshNI	GGYRCC	3 cut(s)	1163, 2329, 2640
BshVI	ATCGAT	1 cut(s)	2898
BsiHKAI	GWGCWC	2 cut(s)	1022, 1540
BsiSI	CCGG	1 cut(s)	2983
BslFI	GGGAC	1 cut(s)	1156
BslI	CCNNNNNNNGG	7 cut(s)	64, 65, 842, 1429, 2019, 2479, 2982
BsmAI	GTCTC	5 cut(s)	31, 236, 317, 1001, 2600
BsmBI	CGTCTC	1 cut(s)	1001
BsmFI	GGGAC	1 cut(s)	1156
BsmI	GAATGC	2 cut(s)	982, 1767
BsnI	GGCC	4 cut(s)	1617, 2502, 2507, 2852
Bsp1286I	GDGCHC	4 cut(s)	1022, 1353, 1540, 1698
Bsp143I	GATC	5 cut(s)	20, 315, 517, 1768, 2635
Bsp1720I	GCTNAGC	1 cut(s)	1672
Bsp19I	CCATGG	1 cut(s)	2124
BspACI	CCGC	7 cut(s)	302, 638, 681, 785, 1929, 2201, 2473
BspANI	GGCC	4 cut(s)	1617, 2502, 2507, 2852
BspCNI	CTCAG	6 cut(s)	41, 94, 325, 471, 1219, 2718
BspDI	ATCGAT	1 cut(s)	2898
BspFNI	CGCG	1 cut(s)	638
BspLI	GGNNCC	6 cut(s)	267, 429, 1165, 1352, 2331, 2642
BspMAI	CTGCAG	2 cut(s)	1105, 2624
BspMI	ACCTGC	1 cut(s)	1210
BspPI	GGATC	2 cut(s)	1763, 2643
BspQI	GCTCTTC	1 cut(s)	1329
BspT107I	GGYRCC	3 cut(s)	1163, 2329, 2640
BsrDI	GCAATG	6 cut(s)	690, 1186, 1239, 1258, 1973, 2070
BsrFI	RCCGGY	1 cut(s)	2982
BssAI	RCCGGY	1 cut(s)	2982
BssECI	CCNNGG	9 cut(s)	549, 1354, 1699, 1998, 2124, 2325, 2738, 2847, 2976
BssMI	GATC	5 cut(s)	20, 315, 517, 1768, 2635
BssNI	GRCGYC	1 cut(s)	9
BssSI	CACGAG	1 cut(s)	1470
BssT1I	CCWWGG	4 cut(s)	2124, 2325, 2738, 2976
Bst2BI	CACGAG	1 cut(s)	1470
Bst2UI	CCWGG	6 cut(s)	100, 432, 1356, 1999, 2504, 2848
Bst6I	CTCTTC	2 cut(s)	123, 1329
BstACI	GRCGYC	1 cut(s)	9
BstAPI	GCANNNNNTGC	1 cut(s)	2153
BstBAI	YACGTR	3 cut(s)	356, 1826, 2791
BstC8I	GCNNGC	5 cut(s)	1397, 1615, 1803, 2376, 2518
BstDSI	CCRYGG	3 cut(s)	549, 1699, 2124
BstF5I	GGATG	7 cut(s)	464, 489, 1191, 1522, 1989, 2028, 2809
BstFNI	CGCG	1 cut(s)	638
BstHHI	GCGC	2 cut(s)	863, 2597
BstKTI	GATC	5 cut(s)	23, 318, 520, 1771, 2638
BstMAI	GTCTC	5 cut(s)	31, 236, 317, 1001, 2600
BstMBI	GATC	5 cut(s)	20, 315, 517, 1768, 2635
BstNI	CCWGG	6 cut(s)	100, 432, 1356, 1999, 2504, 2848
BstNSI	RCATGY	1 cut(s)	1390
BstSCI	CCNGG	6 cut(s)	98, 430, 1354, 1997, 2502, 2846
BstSFI	CTRYAG	5 cut(s)	378, 1101, 2039, 2142, 2620
BstSLI	GKGCMC	2 cut(s)	1022, 1698
BstUI	CGCG	1 cut(s)	638
BstV1I	GCAGC	9 cut(s)	190, 280, 774, 914, 1201, 1597, 1972, 2312, 2634
BstV2I	GAAGAC	1 cut(s)	12
BstX2I	RGATCY	1 cut(s)	20
BstXI	CCANNNNNNTGG	1 cut(s)	2847
BstYI	RGATCY	1 cut(s)	20
Bsu15I	ATCGAT	1 cut(s)	2898
Bsu36I	CCTNAGG	1 cut(s)	479
BsuI	GTATCC	1 cut(s)	1815
BsuRI	GGCC	4 cut(s)	1617, 2502, 2507, 2852
BsuTUI	ATCGAT	1 cut(s)	2898
BtgI	CCRYGG	3 cut(s)	549, 1699, 2124
BtgZI	GCGATG	1 cut(s)	1668
BtsCI	GGATG	7 cut(s)	464, 489, 1191, 1522, 1989, 2028, 2809
BtsI	GCAGTG	5 cut(s)	312, 1042, 1962, 2379, 2454
BveI	ACCTGC	1 cut(s)	1210
Cac8I	GCNNGC	5 cut(s)	1397, 1615, 1803, 2376, 2518
CfoI	GCGC	2 cut(s)	863, 2597
Cfr10I	RCCGGY	1 cut(s)	2982
Cfr13I	GGNCC	4 cut(s)	1112, 2552, 2850, 2980
ClaI	ATCGAT	1 cut(s)	2898
CseI	GACGC	3 cut(s)	17, 1018, 1480
Csp6I	GTAC	7 cut(s)	119, 570, 797, 986, 1164, 2306, 2666
CspCI	CAANNNNNGTGG	4 cut(s)	2327, 2362, 2368, 2403
CviAII	CATG	7 cut(s)	842, 1109, 1387, 1400, 2125, 2257, 2935
CviQI	GTAC	7 cut(s)	119, 570, 797, 986, 1164, 2306, 2666
DpnI	GATC	5 cut(s)	22, 317, 519, 1770, 2637
DpnII	GATC	5 cut(s)	20, 315, 517, 1768, 2635
DraI	TTTAAA	1 cut(s)	856
DraIII	CACNNNGTG	1 cut(s)	2460
EaeI	YGGCCR	2 cut(s)	1615, 2505
Eam1104I	CTCTTC	2 cut(s)	123, 1329
EarI	CTCTTC	2 cut(s)	123, 1329
Eco130I	CCWWGG	4 cut(s)	2124, 2325, 2738, 2976
Eco24I	GRGCYC	1 cut(s)	1353
Eco47I	GGWCC	3 cut(s)	1112, 2552, 2980
Eco57I	CTGAAG	6 cut(s)	147, 811, 933, 1335, 2142, 2930
Eco72I	CACGTG	1 cut(s)	2791
Eco81I	CCTNAGG	1 cut(s)	479
EcoRI	GAATTC	1 cut(s)	1127
EcoRII	CCWGG	6 cut(s)	98, 430, 1354, 1997, 2502, 2846
EcoT14I	CCWWGG	4 cut(s)	2124, 2325, 2738, 2976
EcoT38I	GRGCYC	1 cut(s)	1353
ErhI	CCWWGG	4 cut(s)	2124, 2325, 2738, 2976
Esp3I	CGTCTC	1 cut(s)	1001
FaeI	CATG	7 cut(s)	845, 1112, 1390, 1403, 2128, 2260, 2938
FalI	AAGNNNNNCTT	2 cut(s)	1308, 1340
FaqI	GGGAC	1 cut(s)	1156
FatI	CATG	7 cut(s)	841, 1108, 1386, 1399, 2124, 2256, 2934
FauI	CCCGC	2 cut(s)	631, 778
FbaI	TGATCA	2 cut(s)	315, 517
FblI	GTMKAC	3 cut(s)	54, 591, 1905
FokI	GGATG	7 cut(s)	471, 496, 1198, 1529, 1996, 2035, 2796
FriOI	GRGCYC	1 cut(s)	1353
FspBI	CTAG	4 cut(s)	498, 1557, 1970, 2922
FspI	TGCGCA	1 cut(s)	2596
GlaI	GCGC	2 cut(s)	862, 2596
GsaI	CCCAGC	1 cut(s)	1821
GsuI	CTGGAG	2 cut(s)	284, 1524
HaeIII	GGCC	4 cut(s)	1617, 2502, 2507, 2852
HapII	CCGG	1 cut(s)	2983
HgaI	GACGC	3 cut(s)	17, 1018, 1480
HhaI	GCGC	2 cut(s)	863, 2597
Hin1I	GRCGYC	1 cut(s)	9
Hin1II	CATG	7 cut(s)	845, 1112, 1390, 1403, 2128, 2260, 2938
Hin6I	GCGC	2 cut(s)	861, 2595
HinP1I	GCGC	2 cut(s)	861, 2595
HincII	GTYRAC	4 cut(s)	565, 814, 1311, 1706
HindII	GTYRAC	4 cut(s)	565, 814, 1311, 1706
HpaII	CCGG	1 cut(s)	2983
HphI	GGTGA	6 cut(s)	325, 548, 1203, 1595, 2084, 2453
Hpy99I	CGWCG	1 cut(s)	1983
HpyCH4IV	ACGT	7 cut(s)	355, 506, 938, 1405, 1742, 1825, 2790
HpySE526I	ACGT	7 cut(s)	355, 506, 938, 1405, 1742, 1825, 2790
Hsp92I	GRCGYC	1 cut(s)	9
Hsp92II	CATG	7 cut(s)	845, 1112, 1390, 1403, 2128, 2260, 2938
HspAI	GCGC	2 cut(s)	861, 2595
KpnI	GGTACC	1 cut(s)	1167
Ksp22I	TGATCA	2 cut(s)	315, 517
Kzo9I	GATC	5 cut(s)	20, 315, 517, 1768, 2635
LguI	GCTCTTC	1 cut(s)	1329
LmnI	GCTCC	4 cut(s)	265, 349, 1356, 1543
Lsp1109I	GCAGC	9 cut(s)	190, 280, 774, 914, 1201, 1597, 1972, 2312, 2634
LweI	GCATC	7 cut(s)	1176, 1418, 1658, 1783, 2013, 2077, 2769
MaeI	CTAG	4 cut(s)	498, 1557, 1970, 2922
MaeII	ACGT	7 cut(s)	355, 506, 938, 1405, 1742, 1825, 2790
MalI	GATC	5 cut(s)	22, 317, 519, 1770, 2637
MboI	GATC	5 cut(s)	20, 315, 517, 1768, 2635
MboII	GAAGA	7 cut(s)	17, 140, 1316, 1793, 2113, 2256, 2461
MfeI	CAATTG	1 cut(s)	207
MflI	RGATCY	1 cut(s)	20
MhlI	GDGCHC	4 cut(s)	1022, 1353, 1540, 1698
MlsI	TGGCCA	1 cut(s)	2507
MluNI	TGGCCA	1 cut(s)	2507
MlyI	GAGTC	4 cut(s)	1250, 1316, 1640, 1874
Mox20I	TGGCCA	1 cut(s)	2507
MroXI	GAANNNNTTC	2 cut(s)	918, 1947
MscI	TGGCCA	1 cut(s)	2507
MseI	TTAA	9 cut(s)	251, 575, 855, 876, 1122, 1686, 2082, 2394, 2688
MslI	CAYNNNNRTG	4 cut(s)	683, 828, 1404, 1666
Msp20I	TGGCCA	1 cut(s)	2507
MspA1I	CMGCKG	3 cut(s)	473, 2141, 2303
MspI	CCGG	1 cut(s)	2983
MspR9I	CCNGG	6 cut(s)	100, 432, 1356, 1999, 2504, 2848
MunI	CAATTG	1 cut(s)	207
Mva1269I	GAATGC	2 cut(s)	982, 1767
MvaI	CCWGG	6 cut(s)	100, 432, 1356, 1999, 2504, 2848
MvnI	CGCG	1 cut(s)	638
NcoI	CCATGG	1 cut(s)	2124
NdeII	GATC	5 cut(s)	20, 315, 517, 1768, 2635
NlaIII	CATG	7 cut(s)	845, 1112, 1390, 1403, 2128, 2260, 2938
NlaIV	GGNNCC	6 cut(s)	267, 429, 1165, 1352, 2331, 2642
NmeAIII	GCCGAG	1 cut(s)	2878
NsbI	TGCGCA	1 cut(s)	2596
NspI	RCATGY	1 cut(s)	1390
OliI	CACNNNNGTG	1 cut(s)	828
PciI	ACATGT	1 cut(s)	1386
PciSI	GCTCTTC	1 cut(s)	1329
PctI	GAATGC	2 cut(s)	982, 1767
PdmI	GAANNNNTTC	2 cut(s)	918, 1947
PfeI	GAWTC	8 cut(s)	77, 466, 701, 1286, 1364, 2313, 2405, 2940
PleI	GAGTC	4 cut(s)	1250, 1315, 1639, 1873
PmaCI	CACGTG	1 cut(s)	2791
PmlI	CACGTG	1 cut(s)	2791
PpsI	GAGTC	4 cut(s)	1250, 1315, 1639, 1873
Ppu21I	YACGTR	3 cut(s)	356, 1826, 2791
PscI	ACATGT	1 cut(s)	1386
PshBI	ATTAAT	1 cut(s)	1122
PsiI	TTATAA	1 cut(s)	2732
Psp6I	CCWGG	6 cut(s)	98, 430, 1354, 1997, 2502, 2846
PspCI	CACGTG	1 cut(s)	2791
PspFI	CCCAGC	1 cut(s)	1817
PspGI	CCWGG	6 cut(s)	98, 430, 1354, 1997, 2502, 2846
PspN4I	GGNNCC	6 cut(s)	267, 429, 1165, 1352, 2331, 2642
PspPI	GGNCC	4 cut(s)	1112, 2552, 2850, 2980
PstI	CTGCAG	2 cut(s)	1105, 2624
PsuI	RGATCY	1 cut(s)	20
PvuII	CAGCTG	3 cut(s)	473, 2141, 2303
RsaI	GTAC	7 cut(s)	120, 571, 798, 987, 1165, 2307, 2667
RsaNI	GTAC	7 cut(s)	119, 570, 797, 986, 1164, 2306, 2666
RseI	CAYNNNNRTG	4 cut(s)	683, 828, 1404, 1666
SapI	GCTCTTC	1 cut(s)	1329
SaqAI	TTAA	9 cut(s)	251, 575, 855, 876, 1122, 1686, 2082, 2394, 2688
Sau3AI	GATC	5 cut(s)	20, 315, 517, 1768, 2635
Sau96I	GGNCC	4 cut(s)	1112, 2552, 2850, 2980
ScaI	AGTACT	1 cut(s)	2667
SchI	GAGTC	4 cut(s)	1250, 1316, 1640, 1874
ScrFI	CCNGG	6 cut(s)	100, 432, 1356, 1999, 2504, 2848
SduI	GDGCHC	4 cut(s)	1022, 1353, 1540, 1698
SfaNI	GCATC	7 cut(s)	1176, 1418, 1658, 1783, 2013, 2077, 2769
SfcI	CTRYAG	5 cut(s)	378, 1101, 2039, 2142, 2620
SinI	GGWCC	3 cut(s)	1112, 2552, 2980
SmiMI	CAYNNNNRTG	4 cut(s)	683, 828, 1404, 1666
SmlI	CTYRAG	2 cut(s)	344, 1628
SmoI	CTYRAG	2 cut(s)	344, 1628
SsiI	CCGC	7 cut(s)	302, 638, 681, 785, 1929, 2201, 2473
SspI	AATATT	2 cut(s)	610, 2799
SspMI	CTAG	4 cut(s)	498, 1557, 1970, 2922
StyD4I	CCNGG	6 cut(s)	98, 430, 1354, 1997, 2502, 2846
StyI	CCWWGG	4 cut(s)	2124, 2325, 2738, 2976
TaiI	ACGT	7 cut(s)	358, 509, 941, 1408, 1745, 1828, 2793
TaqI	TCGA	6 cut(s)	511, 1005, 1327, 1634, 2679, 2898
TaqII	GACCGA	1 cut(s)	1491
TatI	WGTACW	5 cut(s)	118, 569, 796, 2305, 2665
TauI	GCSGC	2 cut(s)	305, 2204
TfiI	GAWTC	8 cut(s)	77, 466, 701, 1286, 1364, 2313, 2405, 2940
Tru1I	TTAA	9 cut(s)	251, 575, 855, 876, 1122, 1686, 2082, 2394, 2688
Tru9I	TTAA	9 cut(s)	251, 575, 855, 876, 1122, 1686, 2082, 2394, 2688
TseI	GCWGC	9 cut(s)	203, 293, 762, 902, 1189, 1610, 1960, 2300, 2622
TspGWI	ACGGA	3 cut(s)	335, 538, 1996
VneI	GTGCAC	1 cut(s)	1018
VpaK11BI	GGWCC	3 cut(s)	1112, 2552, 2980
VspI	ATTAAT	1 cut(s)	1122
XapI	RAATTY	3 cut(s)	1127, 1569, 1937
XbaI	TCTAGA	1 cut(s)	2921
XceI	RCATGY	1 cut(s)	1390
XmiI	GTMKAC	3 cut(s)	54, 591, 1905
XmnI	GAANNNNTTC	2 cut(s)	918, 1947
XspI	CTAG	4 cut(s)	498, 1557, 1970, 2922
ZrmI	AGTACT	1 cut(s)	2667

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.