Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0008061

Physical Location & Seq

Genomic Coordinates Reverse (-)

52168307 .. 52171082

Gene Structure 2776 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0375300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2094 bp

ATGAAACCCAATTCAATTCTCCATTTGTTGCTCCATTTGCTGGTGCTTAGTTTCAGTTTAGCGGCTGAACATGGCCCTTCCAGCATCGTCTTCACCACCAACGGCAGATTAGATTACTATTTCGACATCTTCACCCTCCCGATCAGTCACCCACCGCACCCAACCACCGAGACCCGAATCACAGATGGCCAGTCCGTCAACTTCAACGGCCACTTCCCCTCCTCCACTTTCTTTCCCAACCAAACCCGAATCCGATCCCCCACCCGACCCGACCCCTCTCTCCAGATCATCTACGTCACCGAGAGAAACGGCTTTTCCAACATCTACTACGACGCCGTTTACTTCGATTCTCCGTCGAGCATCAGGAAAAGGTCCGCCCTTGAAGTCGTGGACCGGGTTCAGGTCCCTCTGCTGGGCTTGGACGGGGTTTCGATGAAAGACAAGCCCAGTTTGACAGGGGAGTATTTGGTATACGTGTCCACTCACGAAGACTCCGGCGTGCCCAGGACGAGTTCTGCTGCGGTTTACTCGACCGAGTTGAACTCGGCTTTGACCCGGAGGCTGACTCCTTACGGCGTCGCGGACTTCAGCCCCGCGGTGTCGCCGTCTGGGGTTTGGACGGCGGTGGCGTCGTATGGGTCGGAAGGTTGGGACGGCGAGGTCGAGGAGCTCAGTACAGACATCTACGTGTTCTTGACTCGGGACGGGACTCGCCGAGTCAAGGTGGTTGAACACGGCGGCTGGCCGAGTTGGGTTGACGAGTCGACGATTTACTTTCACAGAAGAGGAGAAGACCAGTGGTGGAGTATTTATCGGGCGATTTTACCGAGAGGGGGAGCGATTTCTACCGAGTCAGTGGTGGTGGAGCGAGTTACGCCGCCGGGTCTCCACGCGTTCACACCCGCCACGTCACCGGGGAACCACGACTTCATCGCCGTGGCCACCAGAAGACCCACCACGAGCTTCCGCCACGTGGAGCTGTTCGACTTGGTGAAGGGCGAGTTCAAGGAGCTGACTCGGCTCGTCGCGCCACGTACCCACCACTACAACCCGTTCATCTCCCCCGATTCGAGTCGGGTCGGGTACCACAAGTGCAGAGGCAACGCGAACGGGAAGAAAAGCCCGAAGCTTTTTCTTCAGAATATCCACAGCTCAATTCCGAACCTGTCCGTGCTCAGAATCGACGGCACGTTTCCTTCGTTTTCACCCGCAGGTGACCGTATCGCCTTCGCGAACTTACCGGGTATCTACGTGGTGAACCGCGACGGTTCGAACCGGCGACAGGTCTACCCTGGAAAAGCTTTCTCGACCGCCTGGGACCCGGTTCGCAAGGGCGTCATATACACCGGTGCCGGACCGGAATTTGCACCGGAGAGTGCTGAGGTTGATATCATCTCAATCGACGTTGACCGAATCGCCATCAAGAAGCTAACCACAAACGGGAAGAACAACGCCTTCCCTTCACCATCGCCCGACGGAAAACAGATCGTCTTCCGGTCGGGTCGGTCGGGTCATAAGAACCTCTACATCATGGACGCCGAGGAAGGTGAGACACTTGGGCTCCAGAGACTGACGGAGGGCCCATGGACGGACACGATGTGTAACTGGTCGCCGGACGGTGACTGGATCGCGTTCGCGTCGGACCGGGAGAACCCAGGCAGCGGGAGCTTCGAGTTGTACGTGATCCACCCGAACGGAACCGGGTTGAGGAAAGTGATCCAAAGCGGGTCGGGTGGACGGACCAACCACCCGTGGTTCAGCCCGGATGGAAAGAGCTTGGTTTTCACTTCGGATTATGGGGGCATATCAGCTGAGCCCATCTCAAACCCACATCATTACCAGCCGTACGGTGAGATTTTTACTGTGAAATTGGACGGCTCTGATGTTACGAGGTTGACACAGAATTCGTTTGAGGATGGAACACCGGTGTGGGTCCCCAGCTTCATCAGGCCGTCGGATGTAGAGTGGCCTATTGATAGGCCTAGCTGCAGCTTTGATGATTTGCACTGCCTCAGTGATTTTCCTAGCTATGGTCAGAATGGTGGTGCTGGGGCTGTTCCTTGGCTCTTAAGCAAGCCTCAATGTGGTGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0003674 GO:0003824 GO:0005215 GO:0005384 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006828 GO:0007275 GO:0008150 GO:0008324 GO:0012505 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015410 GO:0015662 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022622 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0034220 GO:0042592 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0046915 GO:0048364 GO:0048731 GO:0048856 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055065 GO:0055071 GO:0055076 GO:0055080 GO:0055085 GO:0065007 GO:0065008 GO:0070588 GO:0070838 GO:0071421 GO:0072511 GO:0090662 GO:0097708 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:0098791 GO:0099131 GO:0099132 GO:0099402

KEGG Pathways

Metabolic & Signaling

ko04020 ko04022 ko04972 ko05010 map04020 map04022 map04972 map05010

Pfam Domains

Protein Families

Cation_ATPase Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase Hydrolase_3

Protein Analysis

697

Amino Acids

76.94

Weight (kDa)

6.2

Isoelectric Point (pI)

41.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Tricorn_N	PF26549	463 - 645	5.9e-21	Tricorn protease N-terminal beta propeller domain
Tricorn_2nd	PF26550	463 - 598	1e-08	Tricorn protease second beta propeller domain
PD40	PF07676	475 - 510	3.1e-07	WD40-like Beta Propeller Repeat
PD40	PF07676	522 - 561	9.6e-08	WD40-like Beta Propeller Repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008061)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10130
fragaria_vesca	FvH4_2g32870 FvH4_2g32870 FvH4_2g32870
malus_domestica	MD08G1080200.v1.1 MD15G1067300.v1.1
prunus_persica	Prupe.1G421100_v2.0.a1 Prupe.1G421100_v2.0.a1 Prupe.1G421100_v2.0.a1 Prupe.1G421100_v2.0.a1 Prupe.1G421100_v2.0.a1
pyrus_communis	pycom08g06620 pycom15g06380
rosa_chinensis	RchiOBHm_Chr6g0309841
rosa_laevigata	RLG00000010530
rosa_multiflora	Rmu_ssc0000373.1_g000002
rosa_roxburghii	Rroxscaffold_7G00159130
rosa_rugosa	Rorug06G0375200 Rorug06G0375300
rosa_samantha	Rh6AG488700 Rh6BG498200 Rh6CG503000 Rh6DG489200
rosa_wichuraiana	Rw6G042560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1202
AasI	GACNNNNNNGTC	1 cut(s)	659
Acc36I	ACCTGC	1 cut(s)	1202
Acc65I	GGTACC	1 cut(s)	1083
AccB1I	GGYRCC	2 cut(s)	1083, 1349
AccB7I	CCANNNNNTGG	1 cut(s)	40
AccI	GTMKAC	3 cut(s)	471, 764, 1287
AccII	CGCG	9 cut(s)	581, 596, 893, 1028, 1106, 1232, 1263, 1631, 1637
AclWI	GGATC	4 cut(s)	249, 1634, 1678, 1711
AcoI	YGGCCR	4 cut(s)	187, 208, 743, 939
AcsI	RAATTY	2 cut(s)	1361, 1903
AcuI	CTGAAG	2 cut(s)	571, 1121
AcvI	CACGTG	1 cut(s)	973
AcyI	GRCGYC	5 cut(s)	333, 576, 629, 1335, 1536
AdeI	CACNNNGTG	1 cut(s)	1599
AfaI	GTAC	5 cut(s)	676, 1036, 1085, 1679, 1847
AflII	CTTAAG	1 cut(s)	2068
AflIII	ACRYGT	3 cut(s)	474, 687, 891
AgeI	ACCGGT	2 cut(s)	1346, 1924
AgsI	TTSAA	6 cut(s)	15, 205, 383, 541, 731, 1006
AjiI	CACGTC	1 cut(s)	909
AjnI	CCWGG	4 cut(s)	503, 1291, 1313, 1654
AleI	CACNNNNGTG	1 cut(s)	1927
Alw21I	GWGCWC	2 cut(s)	672, 1176
Alw26I	GTCTC	4 cut(s)	164, 890, 1544, 1561
AlwI	GGATC	4 cut(s)	249, 1634, 1678, 1711
AlwNI	CAGNNNCTG	1 cut(s)	1570
Ama87I	CYCGRG	1 cut(s)	699
AoxI	GGCC	9 cut(s)	73, 187, 208, 743, 939, 1579, 1949, 1967, 1979
ApaI	GGGCCC	1 cut(s)	1583
ApeKI	GCWGC	4 cut(s)	518, 1659, 1986, 1989
ApoI	RAATTY	2 cut(s)	1361, 1903
ArsI	GACNNNNNNTTYG	2 cut(s)	1888, 1920
AsiGI	ACCGGT	2 cut(s)	1346, 1924
Asp718I	GGTACC	1 cut(s)	1083
AspLEI	GCGC	1 cut(s)	1030
AsuC2I	CCSGG	9 cut(s)	395, 556, 882, 915, 1242, 1322, 1646, 1702, 1763
AsuII	TTCGAA	1 cut(s)	1271
AvaI	CYCGRG	1 cut(s)	699
AvaII	GGWCC	8 cut(s)	372, 391, 403, 1318, 1355, 1642, 1740, 1933
BaeGI	GKGCMC	2 cut(s)	504, 1583
BalI	TGGCCA	2 cut(s)	189, 941
BanI	GGYRCC	2 cut(s)	1083, 1349
BanII	GRGCYC	4 cut(s)	672, 1563, 1583, 1818
BauI	CACGAG	1 cut(s)	958
BbrPI	CACGTG	1 cut(s)	973
BbsI	GAAGAC	5 cut(s)	82, 495, 798, 955, 1483
Bbv12I	GWGCWC	2 cut(s)	672, 1176
BbvCI	CCTCAGC	1 cut(s)	1380
BbvI	GCAGC	4 cut(s)	505, 1671, 1973, 2001
BccI	CCATC	6 cut(s)	179, 1427, 1474, 1760, 1826, 1910
BciT130I	CCWGG	4 cut(s)	505, 1293, 1315, 1656
BcnI	CCSGG	9 cut(s)	395, 556, 882, 915, 1242, 1322, 1646, 1702, 1763
BcoDI	GTCTC	4 cut(s)	164, 890, 1544, 1561
BfaI	CTAG	2 cut(s)	1983, 2025
BfmI	CTRYAG	1 cut(s)	1987
BfrI	CTTAAG	1 cut(s)	2068
BfuAI	ACCTGC	1 cut(s)	1202
BisI	GCNGC	7 cut(s)	63, 519, 739, 878, 1660, 1987, 1990
BlpI	GCTNAGC	1 cut(s)	1812
BlsI	GCNGC	7 cut(s)	64, 520, 740, 879, 1661, 1988, 1991
Bme18I	GGWCC	8 cut(s)	372, 391, 403, 1318, 1355, 1642, 1740, 1933
BmeT110I	CYCGRG	1 cut(s)	699
BmgBI	CACGTC	1 cut(s)	909
BmrI	ACTGGG	1 cut(s)	441
BmsI	GCATC	2 cut(s)	93, 369
BmuI	ACTGGG	1 cut(s)	441
BpiI	GAAGAC	5 cut(s)	82, 495, 798, 955, 1483
BplI	GAGNNNNNCTC	6 cut(s)	527, 559, 550, 582, 1805, 1837
BpmI	CTGGAG	2 cut(s)	266, 1547
Bpu10I	CCTNAGC	1 cut(s)	1380
Bpu1102I	GCTNAGC	1 cut(s)	1812
Bpu14I	TTCGAA	1 cut(s)	1271
BpuMI	CCSGG	9 cut(s)	395, 556, 882, 915, 1242, 1322, 1646, 1702, 1763
BsaAI	YACGTR	6 cut(s)	475, 688, 973, 1034, 1252, 1681
BsaHI	GRCGYC	5 cut(s)	333, 576, 629, 1335, 1536
BsaI	GGTCTC	2 cut(s)	164, 890
BsaWI	WCCGGW	5 cut(s)	1346, 1357, 1369, 1494, 1924
BsaXI	ACNNNNNCTCC	6 cut(s)	203, 233, 476, 506, 1545, 1575
Bse118I	RCCGGY	3 cut(s)	1275, 1346, 1924
Bse1I	ACTGG	5 cut(s)	190, 447, 796, 1610, 1628
BseBI	CCWGG	4 cut(s)	505, 1293, 1315, 1656
BseGI	GGATG	3 cut(s)	1771, 1921, 1963
BseMII	CTCAG	5 cut(s)	685, 1189, 1371, 1803, 2026
BseNI	ACTGG	5 cut(s)	190, 447, 796, 1610, 1628
BseRI	GAGGAG	3 cut(s)	211, 680, 801
BseSI	GKGCMC	2 cut(s)	504, 1583
BseXI	GCAGC	4 cut(s)	505, 1671, 1973, 2001
BseYI	CCCAGC	3 cut(s)	412, 1937, 2048
BsgI	GTGCAG	1 cut(s)	1114
Bsh1236I	CGCG	9 cut(s)	581, 596, 893, 1028, 1106, 1232, 1263, 1631, 1637
Bsh1285I	CGRYCG	4 cut(s)	534, 1311, 1499, 1508
BshFI	GGCC	9 cut(s)	75, 189, 210, 745, 941, 1581, 1951, 1969, 1981
BshNI	GGYRCC	2 cut(s)	1083, 1349
BshTI	ACCGGT	2 cut(s)	1346, 1924
BsiEI	CGRYCG	4 cut(s)	534, 1311, 1499, 1508
BsiHKAI	GWGCWC	2 cut(s)	672, 1176
BsiHKCI	CYCGRG	1 cut(s)	699
BsiWI	CGTACG	1 cut(s)	1845
BslFI	GGGAC	6 cut(s)	389, 665, 716, 721, 1331, 1919
BsmAI	GTCTC	4 cut(s)	164, 890, 1544, 1561
BsmFI	GGGAC	6 cut(s)	389, 665, 716, 721, 1331, 1919
BsnI	GGCC	9 cut(s)	75, 189, 210, 745, 941, 1581, 1951, 1969, 1981
Bso31I	GGTCTC	2 cut(s)	164, 890
BsoBI	CYCGRG	1 cut(s)	699
Bsp119I	TTCGAA	1 cut(s)	1271
Bsp120I	GGGCCC	1 cut(s)	1579
Bsp1286I	GDGCHC	6 cut(s)	504, 672, 1176, 1563, 1583, 1818
Bsp143I	GATC	7 cut(s)	141, 254, 285, 1485, 1626, 1683, 1716
Bsp1720I	GCTNAGC	1 cut(s)	1812
Bsp19I	CCATGG	1 cut(s)	1583
Bsp68I	TCGCGA	1 cut(s)	1232
BspANI	GGCC	9 cut(s)	75, 189, 210, 745, 941, 1581, 1951, 1969, 1981
BspCNI	CTCAG	5 cut(s)	684, 1188, 1372, 1804, 2025
BspFNI	CGCG	9 cut(s)	581, 596, 893, 1028, 1106, 1232, 1263, 1631, 1637
BspMAI	CTGCAG	1 cut(s)	1991
BspMI	ACCTGC	1 cut(s)	1202
BspPI	GGATC	4 cut(s)	249, 1634, 1678, 1711
BspT104I	TTCGAA	1 cut(s)	1271
BspT107I	GGYRCC	2 cut(s)	1083, 1349
BspTI	CTTAAG	1 cut(s)	2068
BspTNI	GGTCTC	2 cut(s)	164, 890
BsrFI	RCCGGY	3 cut(s)	1275, 1346, 1924
BsrI	ACTGG	5 cut(s)	190, 447, 796, 1610, 1628
BssAI	RCCGGY	3 cut(s)	1275, 1346, 1924
BssMI	GATC	7 cut(s)	141, 254, 285, 1485, 1626, 1683, 1716
BssNAI	GTATAC	1 cut(s)	472
BssNI	GRCGYC	5 cut(s)	333, 576, 629, 1335, 1536
BssSI	CACGAG	1 cut(s)	958
BssT1I	CCWWGG	2 cut(s)	1583, 2060
Bst1107I	GTATAC	1 cut(s)	472
Bst2BI	CACGAG	1 cut(s)	958
Bst2UI	CCWGG	4 cut(s)	505, 1293, 1315, 1656
Bst4CI	ACNGT	5 cut(s)	1220, 1268, 1619, 1850, 1864
Bst6I	CTCTTC	1 cut(s)	778
BstACI	GRCGYC	5 cut(s)	333, 576, 629, 1335, 1536
BstAFI	CTTAAG	1 cut(s)	2068
BstBAI	YACGTR	6 cut(s)	475, 688, 973, 1034, 1252, 1681
BstBI	TTCGAA	1 cut(s)	1271
BstC8I	GCNNGC	3 cut(s)	500, 743, 2075
BstDEI	CTNAG	6 cut(s)	47, 671, 1175, 1380, 1812, 2012
BstDSI	CCRYGG	4 cut(s)	594, 936, 1583, 1751
BstEII	GGTNACC	1 cut(s)	1214
BstF5I	GGATG	3 cut(s)	1771, 1921, 1963
BstFNI	CGCG	9 cut(s)	581, 596, 893, 1028, 1106, 1232, 1263, 1631, 1637
BstHHI	GCGC	1 cut(s)	1030
BstKTI	GATC	7 cut(s)	144, 257, 288, 1488, 1629, 1686, 1719
BstMAI	GTCTC	4 cut(s)	164, 890, 1544, 1561
BstMBI	GATC	7 cut(s)	141, 254, 285, 1485, 1626, 1683, 1716
BstMCI	CGRYCG	4 cut(s)	534, 1311, 1499, 1508
BstMWI	GCNNNNNNNGC	6 cut(s)	37, 81, 874, 1018, 1027, 1665
BstNI	CCWGG	4 cut(s)	505, 1293, 1315, 1656
BstPI	GGTNACC	1 cut(s)	1214
BstSFI	CTRYAG	1 cut(s)	1987
BstSLI	GKGCMC	2 cut(s)	504, 1583
BstUI	CGCG	9 cut(s)	581, 596, 893, 1028, 1106, 1232, 1263, 1631, 1637
BstV1I	GCAGC	4 cut(s)	505, 1671, 1973, 2001
BstV2I	GAAGAC	5 cut(s)	82, 495, 798, 955, 1483
BstZ17I	GTATAC	1 cut(s)	472
BsuRI	GGCC	9 cut(s)	75, 189, 210, 745, 941, 1581, 1951, 1969, 1981
BtgI	CCRYGG	4 cut(s)	594, 936, 1583, 1751
BtgZI	GCGATG	2 cut(s)	916, 1452
BtrI	CACGTC	1 cut(s)	909
BtsCI	GGATG	3 cut(s)	1771, 1921, 1963
BtsI	GCAGTG	1 cut(s)	2005
BtsIMutI	CAGTG	4 cut(s)	803, 861, 2005, 2020
BtuMI	TCGCGA	1 cut(s)	1232
BveI	ACCTGC	1 cut(s)	1202
Cac8I	GCNNGC	3 cut(s)	500, 743, 2075
CaiI	CAGNNNCTG	1 cut(s)	1570
CfoI	GCGC	1 cut(s)	1030
Cfr10I	RCCGGY	3 cut(s)	1275, 1346, 1924
Cfr42I	CCGCGG	1 cut(s)	597
CpoI	CGGWCCG	2 cut(s)	1355, 1642
CseI	GACGC	6 cut(s)	341, 565, 618, 1324, 1544, 1626
Csp6I	GTAC	5 cut(s)	675, 1035, 1084, 1678, 1846
CspAI	ACCGGT	2 cut(s)	1346, 1924
CspI	CGGWCCG	2 cut(s)	1355, 1642
CviAII	CATG	3 cut(s)	71, 1531, 1584
CviQI	GTAC	5 cut(s)	675, 1035, 1084, 1678, 1846
DdeI	CTNAG	6 cut(s)	47, 671, 1175, 1380, 1812, 2012
DpnI	GATC	7 cut(s)	143, 256, 287, 1487, 1628, 1685, 1718
DpnII	GATC	7 cut(s)	141, 254, 285, 1485, 1626, 1683, 1716
DraIII	CACNNNGTG	1 cut(s)	1599
DrdI	GACNNNNNNGTC	1 cut(s)	659
DseDI	GACNNNNNNGTC	1 cut(s)	659
EaeI	YGGCCR	4 cut(s)	187, 208, 743, 939
Eam1104I	CTCTTC	1 cut(s)	778
EarI	CTCTTC	1 cut(s)	778
EciI	GGCGGA	2 cut(s)	364, 956
Ecl136II	GAGCTC	1 cut(s)	670
Eco130I	CCWWGG	2 cut(s)	1583, 2060
Eco147I	AGGCCT	1 cut(s)	1981
Eco24I	GRGCYC	4 cut(s)	672, 1563, 1583, 1818
Eco31I	GGTCTC	2 cut(s)	164, 890
Eco32I	GATATC	1 cut(s)	1390
Eco47I	GGWCC	8 cut(s)	372, 391, 403, 1318, 1355, 1642, 1740, 1933
Eco53kI	GAGCTC	1 cut(s)	670
Eco57I	CTGAAG	2 cut(s)	571, 1121
Eco72I	CACGTG	1 cut(s)	973
Eco88I	CYCGRG	1 cut(s)	699
Eco91I	GGTNACC	1 cut(s)	1214
EcoICRI	GAGCTC	1 cut(s)	670
EcoO109I	RGGNCCY	4 cut(s)	403, 1318, 1579, 1933
EcoO65I	GGTNACC	1 cut(s)	1214
EcoRI	GAATTC	1 cut(s)	1903
EcoRII	CCWGG	4 cut(s)	503, 1291, 1313, 1654
EcoRV	GATATC	1 cut(s)	1390
EcoT14I	CCWWGG	2 cut(s)	1583, 2060
EcoT38I	GRGCYC	4 cut(s)	672, 1563, 1583, 1818
ErhI	CCWWGG	2 cut(s)	1583, 2060
FaeI	CATG	3 cut(s)	74, 1534, 1587
FaqI	GGGAC	6 cut(s)	389, 665, 716, 721, 1331, 1919
FatI	CATG	3 cut(s)	70, 1530, 1583
FauI	CCCGC	5 cut(s)	601, 910, 1216, 1655, 1718
FblI	GTMKAC	3 cut(s)	471, 764, 1287
Fnu4HI	GCNGC	7 cut(s)	63, 519, 739, 878, 1660, 1987, 1990
FokI	GGATG	3 cut(s)	1778, 1928, 1970
FriOI	GRGCYC	4 cut(s)	672, 1563, 1583, 1818
Fsp4HI	GCNGC	7 cut(s)	63, 519, 739, 878, 1660, 1987, 1990
FspBI	CTAG	2 cut(s)	1983, 2025
GlaI	GCGC	1 cut(s)	1029
GluI	GCNGC	7 cut(s)	63, 519, 739, 878, 1660, 1987, 1990
GsaI	CCCAGC	3 cut(s)	416, 1941, 2052
GsuI	CTGGAG	2 cut(s)	266, 1547
HaeIII	GGCC	9 cut(s)	75, 189, 210, 745, 941, 1581, 1951, 1969, 1981
HgaI	GACGC	6 cut(s)	341, 565, 618, 1324, 1544, 1626
HhaI	GCGC	1 cut(s)	1030
Hin1I	GRCGYC	5 cut(s)	333, 576, 629, 1335, 1536
Hin1II	CATG	3 cut(s)	74, 1534, 1587
Hin6I	GCGC	1 cut(s)	1028
HinP1I	GCGC	1 cut(s)	1028
HincII	GTYRAC	5 cut(s)	199, 757, 765, 1408, 1896
HindII	GTYRAC	5 cut(s)	199, 757, 765, 1408, 1896
HindIII	AAGCTT	2 cut(s)	1127, 1299
HpyAV	CCTTC	8 cut(s)	87, 638, 988, 1206, 1237, 1465, 1470, 1538
HpyCH4III	ACNGT	5 cut(s)	1220, 1268, 1619, 1850, 1864
HpyCH4V	TGCA	5 cut(s)	1095, 1367, 1989, 2005, 2090
HpyF10VI	GCNNNNNNNGC	6 cut(s)	37, 81, 874, 1018, 1027, 1665
HpyF3I	CTNAG	6 cut(s)	47, 671, 1175, 1380, 1812, 2012
Hsp92I	GRCGYC	5 cut(s)	333, 576, 629, 1335, 1536
Hsp92II	CATG	3 cut(s)	74, 1534, 1587
HspAI	GCGC	1 cut(s)	1028
KflI	GGGWCCC	2 cut(s)	1318, 1933
KpnI	GGTACC	1 cut(s)	1087
KspI	CCGCGG	1 cut(s)	597
Kzo9I	GATC	7 cut(s)	141, 254, 285, 1485, 1626, 1683, 1716
LmnI	GCTCC	8 cut(s)	36, 667, 836, 865, 976, 1009, 1566, 1665
Lsp1109I	GCAGC	4 cut(s)	505, 1671, 1973, 2001
LweI	GCATC	2 cut(s)	93, 369
MaeI	CTAG	2 cut(s)	1983, 2025
MaeIII	GTNAC	8 cut(s)	146, 295, 871, 909, 1214, 1601, 1619, 1885
MalI	GATC	7 cut(s)	143, 256, 287, 1487, 1628, 1685, 1718
MboI	GATC	7 cut(s)	141, 254, 285, 1485, 1626, 1683, 1716
MhlI	GDGCHC	6 cut(s)	504, 672, 1176, 1563, 1583, 1818
MlsI	TGGCCA	2 cut(s)	189, 941
MluCI	AATT	6 cut(s)	10, 15, 1155, 1361, 1868, 1903
MluI	ACGCGT	1 cut(s)	891
MluNI	TGGCCA	2 cut(s)	189, 941
MlyI	GAGTC	9 cut(s)	485, 559, 691, 703, 726, 770, 860, 1009, 1081
MmeI	TCCRAC	4 cut(s)	342, 621, 1620, 1935
Mox20I	TGGCCA	2 cut(s)	189, 941
MscI	TGGCCA	2 cut(s)	189, 941
MseI	TTAA	1 cut(s)	2069
MslI	CAYNNNNRTG	3 cut(s)	686, 935, 1927
Msp20I	TGGCCA	2 cut(s)	189, 941
MspA1I	CMGCKG	3 cut(s)	596, 1662, 1811
MspCI	CTTAAG	1 cut(s)	2068
MvaI	CCWGG	4 cut(s)	505, 1293, 1315, 1656
MvnI	CGCG	9 cut(s)	581, 596, 893, 1028, 1106, 1232, 1263, 1631, 1637
MwoI	GCNNNNNNNGC	6 cut(s)	37, 81, 874, 1018, 1027, 1665
NciI	CCSGG	9 cut(s)	395, 556, 882, 915, 1242, 1322, 1646, 1702, 1763
NcoI	CCATGG	1 cut(s)	1583
NdeII	GATC	7 cut(s)	141, 254, 285, 1485, 1626, 1683, 1716
NlaIII	CATG	3 cut(s)	74, 1534, 1587
NmeAIII	GCCGAG	5 cut(s)	524, 740, 771, 997, 1564
NmuCI	GTSAC	5 cut(s)	146, 295, 909, 1214, 1619
NruI	TCGCGA	1 cut(s)	1232
NspV	TTCGAA	1 cut(s)	1271
OliI	CACNNNNGTG	1 cut(s)	1927
PaqCI	CACCTGC	1 cut(s)	1202
PceI	AGGCCT	1 cut(s)	1981
PcsI	WCGNNNNNNNCGW	4 cut(s)	626, 660, 1196, 1677
PfeI	GAWTC	6 cut(s)	177, 249, 347, 1067, 1179, 1413
Pfl23II	CGTACG	1 cut(s)	1845
PflMI	CCANNNNNTGG	1 cut(s)	40
PinAI	ACCGGT	2 cut(s)	1346, 1924
PkrI	GCNGC	7 cut(s)	64, 520, 740, 879, 1661, 1988, 1991
PleI	GAGTC	9 cut(s)	485, 559, 691, 703, 725, 769, 859, 1009, 1080
PmaCI	CACGTG	1 cut(s)	973
PmlI	CACGTG	1 cut(s)	973
PpsI	GAGTC	9 cut(s)	485, 559, 691, 703, 725, 769, 859, 1009, 1080
Ppu21I	YACGTR	6 cut(s)	475, 688, 973, 1034, 1252, 1681
PpuMI	RGGWCCY	3 cut(s)	403, 1318, 1933
Psp124BI	GAGCTC	1 cut(s)	672
Psp5II	RGGWCCY	3 cut(s)	403, 1318, 1933
Psp6I	CCWGG	4 cut(s)	503, 1291, 1313, 1654
PspCI	CACGTG	1 cut(s)	973
PspEI	GGTNACC	1 cut(s)	1214
PspFI	CCCAGC	3 cut(s)	412, 1937, 2048
PspGI	CCWGG	4 cut(s)	503, 1291, 1313, 1654
PspLI	CGTACG	1 cut(s)	1845
PspOMI	GGGCCC	1 cut(s)	1579
PspPPI	RGGWCCY	3 cut(s)	403, 1318, 1933
PstI	CTGCAG	1 cut(s)	1991
PstNI	CAGNNNCTG	1 cut(s)	1570
PvuII	CAGCTG	1 cut(s)	1811
RruI	TCGCGA	1 cut(s)	1232
RsaI	GTAC	5 cut(s)	676, 1036, 1085, 1679, 1847
RsaNI	GTAC	5 cut(s)	675, 1035, 1084, 1678, 1846
RseI	CAYNNNNRTG	3 cut(s)	686, 935, 1927
Rsr2I	CGGWCCG	2 cut(s)	1355, 1642
RsrII	CGGWCCG	2 cut(s)	1355, 1642
SacI	GAGCTC	1 cut(s)	672
SacII	CCGCGG	1 cut(s)	597
SalI	GTCGAC	1 cut(s)	763
SaqAI	TTAA	1 cut(s)	2069
SatI	GCNGC	7 cut(s)	63, 519, 739, 878, 1660, 1987, 1990
Sau3AI	GATC	7 cut(s)	141, 254, 285, 1485, 1626, 1683, 1716
SchI	GAGTC	9 cut(s)	485, 559, 691, 703, 726, 770, 860, 1009, 1081
SduI	GDGCHC	6 cut(s)	504, 672, 1176, 1563, 1583, 1818
SfaNI	GCATC	2 cut(s)	93, 369
SfcI	CTRYAG	1 cut(s)	1987
Sfr303I	CCGCGG	1 cut(s)	597
SfuI	TTCGAA	1 cut(s)	1271
SgrAI	CRCCGGYG	2 cut(s)	1346, 1924
SgrBI	CCGCGG	1 cut(s)	597
SinI	GGWCC	8 cut(s)	372, 391, 403, 1318, 1355, 1642, 1740, 1933
SmiMI	CAYNNNNRTG	3 cut(s)	686, 935, 1927
SmlI	CTYRAG	1 cut(s)	2068
SmoI	CTYRAG	1 cut(s)	2068
Sse9I	AATT	6 cut(s)	10, 15, 1155, 1361, 1868, 1903
SseBI	AGGCCT	1 cut(s)	1981
SspMI	CTAG	2 cut(s)	1983, 2025
SstI	GAGCTC	1 cut(s)	672
StuI	AGGCCT	1 cut(s)	1981
StyI	CCWWGG	2 cut(s)	1583, 2060
TaaI	ACNGT	5 cut(s)	1220, 1268, 1619, 1850, 1864
TaqII	GACCGA	3 cut(s)	548, 1425, 1494
TasI	AATT	6 cut(s)	10, 15, 1155, 1361, 1868, 1903
TatI	WGTACW	1 cut(s)	674
TauI	GCSGC	3 cut(s)	65, 741, 880
TfiI	GAWTC	6 cut(s)	177, 249, 347, 1067, 1179, 1413
Tru1I	TTAA	1 cut(s)	2069
Tru9I	TTAA	1 cut(s)	2069
TscAI	CASTG	4 cut(s)	803, 861, 2012, 2020
TseFI	GTSAC	5 cut(s)	146, 295, 909, 1214, 1619
TseI	GCWGC	4 cut(s)	518, 1659, 1986, 1989
Tsp45I	GTSAC	5 cut(s)	146, 295, 909, 1214, 1619
TspDTI	ATGAA	5 cut(s)	17, 449, 919, 1045, 1933
TspGWI	ACGGA	8 cut(s)	184, 342, 1159, 1491, 1589, 1604, 1710, 1753
TspRI	CASTG	4 cut(s)	803, 861, 2012, 2020
Van91I	CCANNNNNTGG	1 cut(s)	40
Vha464I	CTTAAG	1 cut(s)	2068
VpaK11BI	GGWCC	8 cut(s)	372, 391, 403, 1318, 1355, 1642, 1740, 1933
XapI	RAATTY	2 cut(s)	1361, 1903
XmiI	GTMKAC	3 cut(s)	471, 764, 1287
XspI	CTAG	2 cut(s)	1983, 2025

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.