AT1G10910

Pentacotripeptide-repeat region of PRORP

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0006792
Physical Location & Seq
Forward (+)
3639835 .. 3644187
4353 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G10910.2

Sequence Viewer

Length: 1995 bp
ATGGAGACGCCACTTCTTGTGGGACTCGAACTACGTTGTCCTCCTCATCTCTTCAACACTCACTCTCGTCCCTCTTCATCTCTCTCCATTCCCGCCTTATCCTTACGAATCCTCACGCCGACGGCGGCAACGACATCTTCCGCTGTTATTGAATTACCGGCGAACGTAGCAGAAGCTCCTCGTTCCAAACGCCATTCCAATTCATACCTGGCGAGAAAATCCGCCATTTCTGAAGTTCAACGCTCCTCGGATTTTCTCTCTTCTCTGCAGAGATTAGCAACAGTTTTGAAGGTACAAGATTTGAATGTAATTTTGCGTGATTTTGGAATCTCTGGAAGATGGCAGGATCTTATACAGCTCTTTGAATGGATGCAACAACATGGAAAGATTAGTGTTTCAACTTACAGTAGCTGCATAAAGTTTGTTGGGGCCAAAAATGTCTCCAAGGCTCTAGAAATATACCAAAGCATTCCAGACGAGTCTACCAAAATCAATGTCTATATATGTAACTCCATTCTTAGTTGTCTGGTCAAGAATGGAAAGCTTGACAGCTGCATCAAATTGTTTGATCAGATGAAGCGCGATGGTCTGAAACCAGATGTGGTTACATATAACACGTTGCTTGCAGGTTGCATTAAGGTAAAAAATGGATACCCTAAGGCTATTGAACTCATTGGAGAGCTGCCTCATAATGGAATACAAATGGACAGTGTGATGTATGGGACTGTCTTGGCCATTTGTGCTTCAAATGGTCGAAGTGAAGAAGCTGAAAACTTTATCCAGCAGATGAAAGTTGAAGGTCATTCGCCCAACATATATCATTACAGCTCTTTACTCAATTCATATTCTTGGAAAGGAGATTACAAGAAAGCTGATGAGCTGATGACCGAGATGAAATCAATAGGATTAGTGCCAAACAAGGTGATGATGACAACTTTACTTAAGGTTTATATCAAAGGAGGGTTGTTTGATAGATCAAGAGAATTACTTTCTGAACTTGAATCTGCTGGGTACGCCGAGAACGAGATGCCGTATTGTATGTTGATGGATGGTCTTTCAAAGGCGGGAAAGTTAGAAGAAGCGAGGTCAATCTTTGATGATATGAAAGGGAAAGGTGTTAGATCTGATGGCTATGCCAACAGCATCATGATATCTGCTTTATGTCGAAGTAAGCGTTTTAAGGAGGCAAAAGAACTGTCAAGGGACTCTGAAACCACTTATGAAAAATGCGACTTGGTAATGTTAAACACAATGCTCTGTGCCTATTGCAGAGCAGGAGAGATGGAAAGTGTTATGCGAATGATGAAGAAAATGGATGAGCAAGCCGTTAGTCCCGACTATAATACTTTCCATATCTTGATCAAATACTTCATCAAGGAGAAATTGCACCTGCTTGCGTACCAAACCACACTGGACATGCACAGCAAAGGCCACAGGCTTGAGGAGGAACTTTGCTCGTCCTTGATATATCATCTCGGCAAGATTAGAGCTCAAGCGGAAGCATTCTCAGTCTACAATATGTTGCGATACAGCAAAAGAACTATCTGCAAAGAGCTGCATGAGAAAATTCTTCACATTCTAATCCAAGGGAATCTCCTAAAAGATGCATACATTGTAGTGAAGGACAATGCGAAGATGATCTCACAGCCTACTTTAAAGAAATTTGGCAGAGCTTTTATGATCTCGGGTAATATTAATTTAGTGAATGATGTTCTGAAAGTATTGCATGGTTCTGGCCACAAAATCGATCAGGTTCAGTTTGAGATTGCGATTTCTCGATACATTTCGCAGCCCGATAAAAAGGAATTGCTTCTTCAACTTCTACAATGGATGCCTGGTCAAGGATATGTTGTTGACTCCTCCACAAGAAACCTCATTCTCAAGAACTCTCATATGTTTGGTCGGCTACTCATTGCAGAGATCTTGTCAAAGCATCATGTCGCTTCAAGACCGATGATAAAATCACGACCAGAGCAAAAATTTAGATGTAAATAA

Protein Analysis

664

Amino Acids

75.1

Weight (kDa)

9.12

Isoelectric Point (pI)

44.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_3 PF13812 159 - 211 2.2e-10 Pentatricopeptide repeat domain
PPR_2 PF13041 165 - 213 5.4e-16 PPR repeat family
PPR PF01535 168 - 197 9.4e-07 PPR repeat
PPR_long PF17177 178 - 334 5.9e-14 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 199 - 243 1.7e-06 PPR repeat family
PPR_3 PF13812 226 - 282 9.9e-08 Pentatricopeptide repeat domain
PPR_2 PF13041 236 - 282 1.3e-07 PPR repeat family
TPR_24 PF23276 242 - 335 3.9e-06 Fungal tetratrico peptide repeats
PPR_2 PF13041 270 - 317 1.6e-07 PPR repeat family
PPR_2 PF13041 345 - 389 4.4e-10 PPR repeat family
PPR PF01535 345 - 373 8.3e-07 PPR repeat
PPR_2 PF13041 411 - 457 8.4e-10 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1398
Acc36I ACCTGC 2 cut(s) 617, 1398
AccI GTMKAC 2 cut(s) 482, 1512
AccII CGCG 1 cut(s) 582
AciI CCGC 6 cut(s) 93, 125, 141, 222, 1064, 1496
AclWI GGATC 1 cut(s) 354
AcoI YGGCCR 2 cut(s) 732, 1735
AcsI RAATTY 3 cut(s) 1566, 1661, 1979
AcuI CTGAAG 1 cut(s) 252
AcyI GRCGYC 1 cut(s) 8
AfaI GTAC 3 cut(s) 294, 1013, 1400
AfiI CCNNNNNNNGG 2 cut(s) 692, 1841
AflII CTTAAG 1 cut(s) 941
AflIII ACRYGT 1 cut(s) 615
AjnI CCWGG 2 cut(s) 207, 1834
Alw21I GWGCWC 1 cut(s) 1492
Alw26I GTCTC 1 cut(s) 445
AlwI GGATC 1 cut(s) 354
AlwNI CAGNNNCTG 1 cut(s) 411
Ama87I CYCGRG 1 cut(s) 1684
AoxI GGCC 4 cut(s) 429, 732, 1429, 1735
ApeKI GCWGC 5 cut(s) 411, 552, 682, 1555, 1789
ApoI RAATTY 3 cut(s) 1566, 1661, 1979
ArsI GACNNNNNNTTYG 4 cut(s) 480, 512, 1181, 1213
AseI ATTAAT 1 cut(s) 1695
Asp700I GAANNNNTTC 1 cut(s) 1809
AspLEI GCGC 1 cut(s) 582
AspS9I GGNCC 1 cut(s) 429
AsuHPI GGTGA 1 cut(s) 934
AvaI CYCGRG 1 cut(s) 1684
AxyI CCTNAGG 1 cut(s) 657
BalI TGGCCA 2 cut(s) 734, 1737
BanII GRGCYC 1 cut(s) 1492
Bbv12I GWGCWC 1 cut(s) 1492
BbvI GCAGC 5 cut(s) 398, 539, 669, 1542, 1801
BccI CCATC 6 cut(s) 333, 578, 1039, 1043, 1121, 1276
BceAI ACGGC 3 cut(s) 138, 1015, 1310
BciT130I CCWGG 2 cut(s) 209, 1836
BciVI GTATCC 1 cut(s) 644
BclI TGATCA 2 cut(s) 568, 1359
BcoDI GTCTC 1 cut(s) 445
BfaI CTAG 1 cut(s) 452
BfmI CTRYAG 1 cut(s) 266
BfrI CTTAAG 1 cut(s) 941
BfuAI ACCTGC 2 cut(s) 617, 1398
BfuI GTATCC 1 cut(s) 644
BglII AGATCT 2 cut(s) 1121, 1920
BisI GCNGC 6 cut(s) 126, 412, 553, 683, 1556, 1790
BlsI GCNGC 6 cut(s) 127, 413, 554, 684, 1557, 1791
Bme1390I CCNGG 2 cut(s) 209, 1836
BmeT110I CYCGRG 1 cut(s) 1684
BmgT120I GGNCC 1 cut(s) 429
BmiI GGNNCC 1 cut(s) 430
BmrFI CCNGG 2 cut(s) 209, 1836
BmsI GCATC 7 cut(s) 360, 564, 1017, 1152, 1594, 1821, 1942
BpuEI CTTGAG 3 cut(s) 1460, 1476, 1865
Bsa29I ATCGAT 1 cut(s) 1746
BsaHI GRCGYC 1 cut(s) 8
BsaJI CCNNGG 3 cut(s) 246, 444, 1585
Bsc4I CCNNNNNNNGG 2 cut(s) 692, 1841
Bse118I RCCGGY 1 cut(s) 157
Bse1I ACTGG 1 cut(s) 1416
Bse21I CCTNAGG 1 cut(s) 657
Bse3DI GCAATG 1 cut(s) 1911
BseBI CCWGG 2 cut(s) 209, 1836
BseCI ATCGAT 1 cut(s) 1746
BseDI CCNNGG 3 cut(s) 246, 444, 1585
BseGI GGATG 4 cut(s) 375, 1054, 1321, 1836
BseLI CCNNNNNNNGG 2 cut(s) 692, 1841
BseMI GCAATG 1 cut(s) 1911
BseMII CTCAG 1 cut(s) 1521
BseNI ACTGG 1 cut(s) 1416
BseRI GAGGAG 5 cut(s) 33, 168, 235, 1457, 1849
BseXI GCAGC 5 cut(s) 398, 539, 669, 1542, 1801
BseYI CCCAGC 1 cut(s) 1007
Bsh1236I CGCG 1 cut(s) 582
BshFI GGCC 4 cut(s) 431, 734, 1431, 1737
BshVI ATCGAT 1 cut(s) 1746
BsiHKAI GWGCWC 1 cut(s) 1492
BsiHKCI CYCGRG 1 cut(s) 1684
BsiSI CCGG 1 cut(s) 158
BslFI GGGAC 5 cut(s) 36, 54, 736, 1217, 1317
BslI CCNNNNNNNGG 2 cut(s) 692, 1841
BsmAI GTCTC 1 cut(s) 445
BsmFI GGGAC 5 cut(s) 36, 54, 736, 1217, 1317
BsmI GAATGC 2 cut(s) 468, 1502
BsnI GGCC 4 cut(s) 431, 734, 1431, 1737
BsoBI CYCGRG 1 cut(s) 1684
Bsp1286I GDGCHC 1 cut(s) 1492
Bsp143I GATC 9 cut(s) 346, 568, 974, 1121, 1359, 1638, 1680, 1747, 1920
BspACI CCGC 6 cut(s) 93, 125, 141, 222, 1064, 1496
BspANI GGCC 4 cut(s) 431, 734, 1431, 1737
BspCNI CTCAG 1 cut(s) 1520
BspDI ATCGAT 1 cut(s) 1746
BspFNI CGCG 1 cut(s) 582
BspHI TCATGA 1 cut(s) 1146
BspLI GGNNCC 1 cut(s) 430
BspMAI CTGCAG 1 cut(s) 270
BspMI ACCTGC 2 cut(s) 617, 1398
BspPI GGATC 1 cut(s) 354
BspTI CTTAAG 1 cut(s) 941
BsrDI GCAATG 1 cut(s) 1911
BsrFI RCCGGY 1 cut(s) 157
BsrI ACTGG 1 cut(s) 1416
BssAI RCCGGY 1 cut(s) 157
BssECI CCNNGG 3 cut(s) 246, 444, 1585
BssMI GATC 9 cut(s) 346, 568, 974, 1121, 1359, 1638, 1680, 1747, 1920
BssNI GRCGYC 1 cut(s) 8
BssT1I CCWWGG 2 cut(s) 444, 1585
Bst2UI CCWGG 2 cut(s) 209, 1836
Bst4CI ACNGT 5 cut(s) 283, 407, 710, 727, 1197
Bst6I CTCTTC 3 cut(s) 56, 79, 265
BstACI GRCGYC 1 cut(s) 8
BstAFI CTTAAG 1 cut(s) 941
BstC8I GCNNGC 3 cut(s) 624, 1323, 1395
BstDEI CTNAG 3 cut(s) 518, 657, 1507
BstENI CCTNNNNNAGG 1 cut(s) 1839
BstF5I GGATG 4 cut(s) 375, 1054, 1321, 1836
BstFNI CGCG 1 cut(s) 582
BstHHI GCGC 1 cut(s) 582
BstKTI GATC 9 cut(s) 349, 571, 977, 1124, 1362, 1641, 1683, 1750, 1923
BstMAI GTCTC 1 cut(s) 445
BstMBI GATC 9 cut(s) 346, 568, 974, 1121, 1359, 1638, 1680, 1747, 1920
BstMWI GCNNNNNNNGC 3 cut(s) 167, 740, 1013
BstNI CCWGG 2 cut(s) 209, 1836
BstNSI RCATGY 1 cut(s) 1420
BstSCI CCNGG 2 cut(s) 207, 1834
BstSFI CTRYAG 1 cut(s) 266
BstUI CGCG 1 cut(s) 582
BstV1I GCAGC 5 cut(s) 398, 539, 669, 1542, 1801
BstX2I RGATCY 3 cut(s) 346, 1121, 1920
BstYI RGATCY 3 cut(s) 346, 1121, 1920
Bsu15I ATCGAT 1 cut(s) 1746
Bsu36I CCTNAGG 1 cut(s) 657
BsuI GTATCC 1 cut(s) 644
BsuRI GGCC 4 cut(s) 431, 734, 1431, 1737
BsuTUI ATCGAT 1 cut(s) 1746
BtgZI GCGATG 1 cut(s) 597
BtsCI GGATG 4 cut(s) 375, 1054, 1321, 1836
BtsIMutI CAGTG 2 cut(s) 715, 1409
BveI ACCTGC 2 cut(s) 617, 1398
Cac8I GCNNGC 3 cut(s) 624, 1323, 1395
CaiI CAGNNNCTG 1 cut(s) 411
CciI TCATGA 1 cut(s) 1146
CfoI GCGC 1 cut(s) 582
Cfr10I RCCGGY 1 cut(s) 157
Cfr13I GGNCC 1 cut(s) 429
ClaI ATCGAT 1 cut(s) 1746
CseI GACGC 1 cut(s) 16
Csp6I GTAC 3 cut(s) 293, 1012, 1399
CviAII CATG 6 cut(s) 380, 1147, 1417, 1559, 1727, 1937
CviQI GTAC 3 cut(s) 293, 1012, 1399
DdeI CTNAG 3 cut(s) 518, 657, 1507
DpnI GATC 9 cut(s) 348, 570, 976, 1123, 1361, 1640, 1682, 1749, 1922
DpnII GATC 9 cut(s) 346, 568, 974, 1121, 1359, 1638, 1680, 1747, 1920
DraI TTTAAA 1 cut(s) 1656
EaeI YGGCCR 2 cut(s) 732, 1735
Eam1104I CTCTTC 3 cut(s) 56, 79, 265
EarI CTCTTC 3 cut(s) 56, 79, 265
EciI GGCGGA 1 cut(s) 211
Ecl136II GAGCTC 1 cut(s) 1490
Eco130I CCWWGG 2 cut(s) 444, 1585
Eco24I GRGCYC 1 cut(s) 1492
Eco32I GATATC 1 cut(s) 1152
Eco53kI GAGCTC 1 cut(s) 1490
Eco57I CTGAAG 1 cut(s) 252
Eco81I CCTNAGG 1 cut(s) 657
Eco88I CYCGRG 1 cut(s) 1684
EcoICRI GAGCTC 1 cut(s) 1490
EcoNI CCTNNNNNAGG 1 cut(s) 1839
EcoRII CCWGG 2 cut(s) 207, 1834
EcoRV GATATC 1 cut(s) 1152
EcoT14I CCWWGG 2 cut(s) 444, 1585
EcoT22I ATGCAT 1 cut(s) 1609
EcoT38I GRGCYC 1 cut(s) 1492
ErhI CCWWGG 2 cut(s) 444, 1585
FaeI CATG 6 cut(s) 383, 1150, 1420, 1562, 1730, 1940
FaqI GGGAC 5 cut(s) 36, 54, 736, 1217, 1317
FatI CATG 6 cut(s) 379, 1146, 1416, 1558, 1726, 1936
FauI CCCGC 2 cut(s) 100, 1057
FauNDI CATATG 1 cut(s) 1893
FbaI TGATCA 2 cut(s) 568, 1359
FblI GTMKAC 2 cut(s) 482, 1512
Fnu4HI GCNGC 6 cut(s) 126, 412, 553, 683, 1556, 1790
FokI GGATG 4 cut(s) 382, 1061, 1328, 1843
FriOI GRGCYC 1 cut(s) 1492
Fsp4HI GCNGC 6 cut(s) 126, 412, 553, 683, 1556, 1790
FspBI CTAG 1 cut(s) 452
GlaI GCGC 1 cut(s) 581
GluI GCNGC 6 cut(s) 126, 412, 553, 683, 1556, 1790
GsaI CCCAGC 1 cut(s) 1011
HaeIII GGCC 4 cut(s) 431, 734, 1431, 1737
HapII CCGG 1 cut(s) 158
HgaI GACGC 1 cut(s) 16
HhaI GCGC 1 cut(s) 582
Hin1I GRCGYC 1 cut(s) 8
Hin1II CATG 6 cut(s) 383, 1150, 1420, 1562, 1730, 1940
Hin6I GCGC 1 cut(s) 580
HinP1I GCGC 1 cut(s) 580
HincII GTYRAC 1 cut(s) 1855
HindII GTYRAC 1 cut(s) 1855
HindIII AAGCTT 1 cut(s) 542
HinfI GANTC 8 cut(s) 24, 108, 327, 479, 1001, 1205, 1591, 1856
HpaII CCGG 1 cut(s) 158
HphI GGTGA 1 cut(s) 934
Hpy166II GTNNAC 3 cut(s) 483, 1513, 1855
Hpy188I TCNGA 8 cut(s) 232, 250, 573, 591, 994, 1126, 1210, 1716
Hpy8I GTNNAC 3 cut(s) 483, 1513, 1855
Hpy99I CGWCG 1 cut(s) 124
HpyAV CCTTC 3 cut(s) 283, 791, 1615
HpyCH4III ACNGT 5 cut(s) 283, 407, 710, 727, 1197
HpyCH4IV ACGT 3 cut(s) 34, 165, 617
HpyF10VI GCNNNNNNNGC 3 cut(s) 167, 740, 1013
HpyF3I CTNAG 3 cut(s) 518, 657, 1507
HpySE526I ACGT 3 cut(s) 34, 165, 617
Hsp92I GRCGYC 1 cut(s) 8
Hsp92II CATG 6 cut(s) 383, 1150, 1420, 1562, 1730, 1940
HspAI GCGC 1 cut(s) 580
Ksp22I TGATCA 2 cut(s) 568, 1359
Kzo9I GATC 9 cut(s) 346, 568, 974, 1121, 1359, 1638, 1680, 1747, 1920
LmnI GCTCC 2 cut(s) 181, 248
Lsp1109I GCAGC 5 cut(s) 398, 539, 669, 1542, 1801
LweI GCATC 7 cut(s) 360, 564, 1017, 1152, 1594, 1821, 1942
MaeI CTAG 1 cut(s) 452
MaeII ACGT 3 cut(s) 34, 165, 617
MaeIII GTNAC 2 cut(s) 506, 604
MalI GATC 9 cut(s) 348, 570, 976, 1123, 1361, 1640, 1682, 1749, 1922
MboI GATC 9 cut(s) 346, 568, 974, 1121, 1359, 1638, 1680, 1747, 1920
MflI RGATCY 3 cut(s) 346, 1121, 1920
MhlI GDGCHC 1 cut(s) 1492
MlsI TGGCCA 2 cut(s) 734, 1737
MluNI TGGCCA 2 cut(s) 734, 1737
MlyI GAGTC 4 cut(s) 18, 488, 1199, 1850
Mox20I TGGCCA 2 cut(s) 734, 1737
Mph1103I ATGCAT 1 cut(s) 1609
MroXI GAANNNNTTC 1 cut(s) 1809
MscI TGGCCA 2 cut(s) 734, 1737
MseI TTAA 6 cut(s) 636, 942, 1179, 1244, 1655, 1695
MslI CAYNNNNRTG 1 cut(s) 1616
Msp20I TGGCCA 2 cut(s) 734, 1737
MspA1I CMGCKG 2 cut(s) 143, 552
MspCI CTTAAG 1 cut(s) 941
MspI CCGG 1 cut(s) 158
MspR9I CCNGG 2 cut(s) 209, 1836
Mva1269I GAATGC 2 cut(s) 468, 1502
MvaI CCWGG 2 cut(s) 209, 1836
MvnI CGCG 1 cut(s) 582
MwoI GCNNNNNNNGC 3 cut(s) 167, 740, 1013
NdeI CATATG 1 cut(s) 1893
NdeII GATC 9 cut(s) 346, 568, 974, 1121, 1359, 1638, 1680, 1747, 1920
NlaIII CATG 6 cut(s) 383, 1150, 1420, 1562, 1730, 1940
NlaIV GGNNCC 1 cut(s) 430
NmeAIII GCCGAG 2 cut(s) 1042, 1455
NsiI ATGCAT 1 cut(s) 1609
NspI RCATGY 1 cut(s) 1420
PagI TCATGA 1 cut(s) 1146
PaqCI CACCTGC 1 cut(s) 1398
PcsI WCGNNNNNNNCGW 3 cut(s) 128, 1020, 1171
PctI GAATGC 2 cut(s) 468, 1502
PdmI GAANNNNTTC 1 cut(s) 1809
PfeI GAWTC 4 cut(s) 108, 327, 1001, 1591
PkrI GCNGC 6 cut(s) 127, 413, 554, 684, 1557, 1791
PleI GAGTC 4 cut(s) 18, 487, 1199, 1850
PpsI GAGTC 4 cut(s) 18, 487, 1199, 1850
PshBI ATTAAT 1 cut(s) 1695
Psp124BI GAGCTC 1 cut(s) 1492
Psp6I CCWGG 2 cut(s) 207, 1834
PspFI CCCAGC 1 cut(s) 1007
PspGI CCWGG 2 cut(s) 207, 1834
PspN4I GGNNCC 1 cut(s) 430
PspPI GGNCC 1 cut(s) 429
PstI CTGCAG 1 cut(s) 270
PstNI CAGNNNCTG 1 cut(s) 411
PsuI RGATCY 3 cut(s) 346, 1121, 1920
PvuII CAGCTG 1 cut(s) 552
RsaI GTAC 3 cut(s) 294, 1013, 1400
RsaNI GTAC 3 cut(s) 293, 1012, 1399
RseI CAYNNNNRTG 1 cut(s) 1616
SacI GAGCTC 1 cut(s) 1492
SaqAI TTAA 6 cut(s) 636, 942, 1179, 1244, 1655, 1695
SatI GCNGC 6 cut(s) 126, 412, 553, 683, 1556, 1790
Sau3AI GATC 9 cut(s) 346, 568, 974, 1121, 1359, 1638, 1680, 1747, 1920
Sau96I GGNCC 1 cut(s) 429
SchI GAGTC 4 cut(s) 18, 488, 1199, 1850
ScrFI CCNGG 2 cut(s) 209, 1836
SduI GDGCHC 1 cut(s) 1492
SfaNI GCATC 7 cut(s) 360, 564, 1017, 1152, 1594, 1821, 1942
SfcI CTRYAG 1 cut(s) 266
SmiMI CAYNNNNRTG 1 cut(s) 1616
SmlI CTYRAG 4 cut(s) 941, 1439, 1491, 1880
SmoI CTYRAG 4 cut(s) 941, 1439, 1491, 1880
SsiI CCGC 6 cut(s) 93, 125, 141, 222, 1064, 1496
SspI AATATT 1 cut(s) 1693
SspMI CTAG 1 cut(s) 452
SstI GAGCTC 1 cut(s) 1492
StyD4I CCNGG 2 cut(s) 207, 1834
StyI CCWWGG 2 cut(s) 444, 1585
TaaI ACNGT 5 cut(s) 283, 407, 710, 727, 1197
TaiI ACGT 3 cut(s) 37, 168, 620
TaqI TCGA 5 cut(s) 27, 754, 1165, 1746, 1777
TaqII GACCGA 2 cut(s) 902, 1966
TauI GCSGC 1 cut(s) 128
TfiI GAWTC 4 cut(s) 108, 327, 1001, 1591
Tru1I TTAA 6 cut(s) 636, 942, 1179, 1244, 1655, 1695
Tru9I TTAA 6 cut(s) 636, 942, 1179, 1244, 1655, 1695
TscAI CASTG 2 cut(s) 715, 1416
TseI GCWGC 5 cut(s) 411, 552, 682, 1555, 1789
TspRI CASTG 2 cut(s) 715, 1416
Vha464I CTTAAG 1 cut(s) 941
VspI ATTAAT 1 cut(s) 1695
XagI CCTNNNNNAGG 1 cut(s) 1839
XapI RAATTY 3 cut(s) 1566, 1661, 1979
XbaI TCTAGA 1 cut(s) 451
XceI RCATGY 1 cut(s) 1420
XcmI CCANNNNNNNNNTGG 1 cut(s) 205
XmiI GTMKAC 2 cut(s) 482, 1512
XmnI GAANNNNTTC 1 cut(s) 1809
XspI CTAG 1 cut(s) 452
Zsp2I ATGCAT 1 cut(s) 1609
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.