Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G10910 AT1G10910 |
| fragaria_vesca | FvH4_5g29340 FvH4_5g29340 FvH4_5g29340 FvH4_5g29340 FvH4_5g29340 FvH4_5g29340 FvH4_5g29340 FvH4_5g29340 FvH4_5g29340 FvH4_5g29340 |
| malus_domestica | MD15G1423900.v1.1 |
| prunus_persica | Prupe.1G569600_v2.0.a1 |
| pyrus_communis | pycom15g37570 |
| rosa_chinensis | RchiOBHm_Chr7g0222211 |
| rosa_laevigata | RLG00000002083 |
| rosa_multiflora | Rmu_ssc0000240.1_g000019 |
| rosa_roxburghii | Rroxscaffold_3G00237300 |
| rosa_rugosa | Rorug07G0206800 |
| rosa_samantha | Rh7AG347400 Rh7BG338100 Rh7CG365000 Rh7DG345600 |
| rosa_wichuraiana | Rw7G029440 Rw7G029860 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2358 |
| AarI | CACCTGC | 1 cut(s) | 2222 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 27 |
| Acc36I | ACCTGC | 3 cut(s) | 1574, 2222, 2772 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 233 |
| AciI | CCGC | 3 cut(s) | 919, 1102, 1812 |
| AclI | AACGTT | 1 cut(s) | 1452 |
| AclWI | GGATC | 2 cut(s) | 537, 550 |
| AcoI | YGGCCR | 2 cut(s) | 355, 2724 |
| AcsI | RAATTY | 6 cut(s) | 675, 1373, 1413, 1595, 1772, 2618 |
| AcuI | CTGAAG | 6 cut(s) | 444, 558, 890, 1073, 1995, 2756 |
| AcyI | GRCGYC | 1 cut(s) | 851 |
| AdeI | CACNNNGTG | 1 cut(s) | 794 |
| AfaI | GTAC | 6 cut(s) | 350, 1573, 1681, 1869, 2076, 2324 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 233, 567, 921, 1104, 2017, 2798 |
| AflIII | ACRYGT | 1 cut(s) | 808 |
| AjnI | CCWGG | 2 cut(s) | 45, 444 |
| Alw21I | GWGCWC | 1 cut(s) | 863 |
| Alw26I | GTCTC | 1 cut(s) | 13 |
| AlwI | GGATC | 2 cut(s) | 537, 550 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1559 |
| AoxI | GGCC | 7 cut(s) | 355, 387, 613, 959, 1142, 2508, 2724 |
| ApeKI | GCWGC | 8 cut(s) | 449, 819, 925, 1108, 1362, 1576, 1654, 2890 |
| ApoI | RAATTY | 6 cut(s) | 675, 1373, 1413, 1595, 1772, 2618 |
| AspS9I | GGNCC | 7 cut(s) | 224, 321, 613, 636, 2509, 2746, 2761 |
| AsuC2I | CCSGG | 2 cut(s) | 2589, 2793 |
| AsuHPI | GGTGA | 4 cut(s) | 23, 476, 1517, 2246 |
| AsuII | TTCGAA | 1 cut(s) | 1613 |
| AvaII | GGWCC | 5 cut(s) | 224, 321, 636, 2746, 2761 |
| BalI | TGGCCA | 2 cut(s) | 357, 2726 |
| BamHI | GGATCC | 1 cut(s) | 542 |
| BanII | GRGCYC | 2 cut(s) | 915, 1098 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1746, 1778 |
| BbsI | GAAGAC | 3 cut(s) | 181, 195, 878 |
| Bbv12I | GWGCWC | 1 cut(s) | 863 |
| BbvI | GCAGC | 8 cut(s) | 461, 806, 937, 1120, 1374, 1563, 1641, 2902 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2484, 2518 |
| BciT130I | CCWGG | 2 cut(s) | 47, 446 |
| BclI | TGATCA | 1 cut(s) | 2704 |
| BcnI | CCSGG | 2 cut(s) | 2589, 2793 |
| BcoDI | GTCTC | 1 cut(s) | 13 |
| BfmI | CTRYAG | 5 cut(s) | 1567, 1655, 1857, 2095, 2780 |
| BfuAI | ACCTGC | 3 cut(s) | 1574, 2222, 2772 |
| BisI | GCNGC | 8 cut(s) | 450, 820, 926, 1109, 1363, 1577, 1655, 2891 |
| BlsI | GCNGC | 8 cut(s) | 451, 821, 927, 1110, 1364, 1578, 1656, 2892 |
| BmcAI | AGTACT | 1 cut(s) | 2324 |
| Bme1390I | CCNGG | 4 cut(s) | 47, 446, 2589, 2793 |
| Bme18I | GGWCC | 5 cut(s) | 224, 321, 636, 2746, 2761 |
| BmgT120I | GGNCC | 7 cut(s) | 224, 321, 613, 636, 2509, 2746, 2761 |
| BmiI | GGNNCC | 3 cut(s) | 544, 637, 2748 |
| BmrFI | CCNGG | 4 cut(s) | 47, 446, 2589, 2793 |
| BmrI | ACTGGG | 1 cut(s) | 642 |
| BmuI | ACTGGG | 1 cut(s) | 642 |
| BpiI | GAAGAC | 3 cut(s) | 181, 195, 878 |
| Bpu10I | CCTNAGC | 3 cut(s) | 2016, 2157, 2480 |
| Bpu14I | TTCGAA | 1 cut(s) | 1613 |
| BpuEI | CTTGAG | 4 cut(s) | 255, 352, 625, 2907 |
| BpuMI | CCSGG | 2 cut(s) | 2589, 2793 |
| BsaHI | GRCGYC | 1 cut(s) | 851 |
| BsaJI | CCNNGG | 5 cut(s) | 377, 854, 2122, 2364, 2588 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 233, 567, 921, 1104, 2017, 2798 |
| Bse118I | RCCGGY | 2 cut(s) | 921, 1104 |
| Bse1I | ACTGG | 3 cut(s) | 16, 637, 1959 |
| Bse3DI | GCAATG | 1 cut(s) | 2868 |
| BseBI | CCWGG | 2 cut(s) | 47, 446 |
| BseDI | CCNNGG | 5 cut(s) | 377, 854, 2122, 2364, 2588 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 233, 567, 921, 1104, 2017, 2798 |
| BseMI | GCAATG | 1 cut(s) | 2868 |
| BseMII | CTCAG | 2 cut(s) | 858, 2252 |
| BseNI | ACTGG | 3 cut(s) | 16, 637, 1959 |
| BseRI | GAGGAG | 2 cut(s) | 532, 535 |
| BseXI | GCAGC | 8 cut(s) | 461, 806, 937, 1120, 1374, 1563, 1641, 2902 |
| BseYI | CCCAGC | 3 cut(s) | 682, 1308, 2021 |
| BshFI | GGCC | 7 cut(s) | 357, 389, 615, 961, 1144, 2510, 2726 |
| BsiHKAI | GWGCWC | 1 cut(s) | 863 |
| BsiSI | CCGG | 4 cut(s) | 922, 1105, 2588, 2792 |
| BslFI | GGGAC | 1 cut(s) | 2808 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 233, 567, 921, 1104, 2017, 2798 |
| BsmAI | GTCTC | 1 cut(s) | 13 |
| BsmFI | GGGAC | 1 cut(s) | 2808 |
| BsmI | GAATGC | 2 cut(s) | 1264, 1425 |
| BsnI | GGCC | 7 cut(s) | 357, 389, 615, 961, 1144, 2510, 2726 |
| Bsp119I | TTCGAA | 1 cut(s) | 1613 |
| Bsp1286I | GDGCHC | 3 cut(s) | 863, 915, 1098 |
| Bsp143I | GATC | 8 cut(s) | 337, 414, 481, 542, 1300, 2078, 2211, 2704 |
| Bsp19I | CCATGG | 2 cut(s) | 854, 2364 |
| BspACI | CCGC | 3 cut(s) | 919, 1102, 1812 |
| BspANI | GGCC | 7 cut(s) | 357, 389, 615, 961, 1144, 2510, 2726 |
| BspCNI | CTCAG | 2 cut(s) | 857, 2253 |
| BspHI | TCATGA | 1 cut(s) | 2515 |
| BspLI | GGNNCC | 3 cut(s) | 544, 637, 2748 |
| BspMAI | CTGCAG | 2 cut(s) | 1659, 1861 |
| BspMI | ACCTGC | 3 cut(s) | 1574, 2222, 2772 |
| BspPI | GGATC | 2 cut(s) | 537, 550 |
| BspQI | GCTCTTC | 1 cut(s) | 1379 |
| BspT104I | TTCGAA | 1 cut(s) | 1613 |
| BsrDI | GCAATG | 1 cut(s) | 2868 |
| BsrFI | RCCGGY | 2 cut(s) | 921, 1104 |
| BsrI | ACTGG | 3 cut(s) | 16, 637, 1959 |
| BssAI | RCCGGY | 2 cut(s) | 921, 1104 |
| BssECI | CCNNGG | 5 cut(s) | 377, 854, 2122, 2364, 2588 |
| BssMI | GATC | 8 cut(s) | 337, 414, 481, 542, 1300, 2078, 2211, 2704 |
| BssNI | GRCGYC | 1 cut(s) | 851 |
| BssT1I | CCWWGG | 2 cut(s) | 854, 2364 |
| Bst2UI | CCWGG | 2 cut(s) | 47, 446 |
| Bst4CI | ACNGT | 7 cut(s) | 1014, 1197, 1607, 1994, 2099, 2784, 2809 |
| Bst6I | CTCTTC | 2 cut(s) | 509, 1379 |
| BstACI | GRCGYC | 1 cut(s) | 851 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 107 |
| BstBI | TTCGAA | 1 cut(s) | 1613 |
| BstC8I | GCNNGC | 6 cut(s) | 359, 923, 1106, 1581, 2352, 2607 |
| BstDEI | CTNAG | 5 cut(s) | 844, 2016, 2157, 2261, 2480 |
| BstDSI | CCRYGG | 3 cut(s) | 377, 854, 2364 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2015 |
| BstKTI | GATC | 8 cut(s) | 340, 417, 484, 545, 1303, 2081, 2214, 2707 |
| BstMAI | GTCTC | 1 cut(s) | 13 |
| BstMBI | GATC | 8 cut(s) | 337, 414, 481, 542, 1300, 2078, 2211, 2704 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 107, 1697, 2887 |
| BstNI | CCWGG | 2 cut(s) | 47, 446 |
| BstNSI | RCATGY | 3 cut(s) | 812, 2350, 2377 |
| BstSCI | CCNGG | 4 cut(s) | 45, 444, 2587, 2791 |
| BstSFI | CTRYAG | 5 cut(s) | 1567, 1655, 1857, 2095, 2780 |
| BstV1I | GCAGC | 8 cut(s) | 461, 806, 937, 1120, 1374, 1563, 1641, 2902 |
| BstV2I | GAAGAC | 3 cut(s) | 181, 195, 878 |
| BstX2I | RGATCY | 1 cut(s) | 542 |
| BstYI | RGATCY | 1 cut(s) | 542 |
| BsuRI | GGCC | 7 cut(s) | 357, 389, 615, 961, 1144, 2510, 2726 |
| BtgI | CCRYGG | 3 cut(s) | 377, 854, 2364 |
| BtgZI | GCGATG | 1 cut(s) | 512 |
| BtsI | GCAGTG | 2 cut(s) | 88, 471 |
| BtsIMutI | CAGTG | 4 cut(s) | 88, 471, 852, 2789 |
| BveI | ACCTGC | 3 cut(s) | 1574, 2222, 2772 |
| Cac8I | GCNNGC | 6 cut(s) | 359, 923, 1106, 1581, 2352, 2607 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1559 |
| CciI | TCATGA | 1 cut(s) | 2515 |
| Cfr10I | RCCGGY | 2 cut(s) | 921, 1104 |
| Cfr13I | GGNCC | 7 cut(s) | 224, 321, 613, 636, 2509, 2746, 2761 |
| CseI | GACGC | 2 cut(s) | 859, 1338 |
| Csp6I | GTAC | 6 cut(s) | 349, 1572, 1680, 1868, 2075, 2323 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 883, 918, 1066, 1101 |
| CviQI | GTAC | 6 cut(s) | 349, 1572, 1680, 1868, 2075, 2323 |
| DdeI | CTNAG | 5 cut(s) | 844, 2016, 2157, 2261, 2480 |
| DpnI | GATC | 8 cut(s) | 339, 416, 483, 544, 1302, 2080, 2213, 2706 |
| DpnII | GATC | 8 cut(s) | 337, 414, 481, 542, 1300, 2078, 2211, 2704 |
| DraIII | CACNNNGTG | 1 cut(s) | 794 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 27 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 27 |
| EaeI | YGGCCR | 2 cut(s) | 355, 2724 |
| Eam1104I | CTCTTC | 2 cut(s) | 509, 1379 |
| EarI | CTCTTC | 2 cut(s) | 509, 1379 |
| EciI | GGCGGA | 2 cut(s) | 908, 1091 |
| Eco130I | CCWWGG | 2 cut(s) | 854, 2364 |
| Eco147I | AGGCCT | 2 cut(s) | 961, 1144 |
| Eco24I | GRGCYC | 2 cut(s) | 915, 1098 |
| Eco32I | GATATC | 3 cut(s) | 242, 430, 2901 |
| Eco47I | GGWCC | 5 cut(s) | 224, 321, 636, 2746, 2761 |
| Eco57I | CTGAAG | 6 cut(s) | 444, 558, 890, 1073, 1995, 2756 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2015 |
| EcoO109I | RGGNCCY | 3 cut(s) | 636, 2509, 2761 |
| EcoRI | GAATTC | 1 cut(s) | 1772 |
| EcoRII | CCWGG | 2 cut(s) | 45, 444 |
| EcoRV | GATATC | 3 cut(s) | 242, 430, 2901 |
| EcoT14I | CCWWGG | 2 cut(s) | 854, 2364 |
| EcoT38I | GRGCYC | 2 cut(s) | 915, 1098 |
| ErhI | CCWWGG | 2 cut(s) | 854, 2364 |
| FaqI | GGGAC | 1 cut(s) | 2808 |
| FauI | CCCGC | 1 cut(s) | 1805 |
| FauNDI | CATATG | 3 cut(s) | 229, 1460, 2895 |
| FbaI | TGATCA | 1 cut(s) | 2704 |
| Fnu4HI | GCNGC | 8 cut(s) | 450, 820, 926, 1109, 1363, 1577, 1655, 2891 |
| FriOI | GRGCYC | 2 cut(s) | 915, 1098 |
| Fsp4HI | GCNGC | 8 cut(s) | 450, 820, 926, 1109, 1363, 1577, 1655, 2891 |
| GluI | GCNGC | 8 cut(s) | 450, 820, 926, 1109, 1363, 1577, 1655, 2891 |
| GsaI | CCCAGC | 3 cut(s) | 686, 1312, 2025 |
| HaeIII | GGCC | 7 cut(s) | 357, 389, 615, 961, 1144, 2510, 2726 |
| HapII | CCGG | 4 cut(s) | 922, 1105, 2588, 2792 |
| HgaI | GACGC | 2 cut(s) | 859, 1338 |
| Hin1I | GRCGYC | 1 cut(s) | 851 |
| HincII | GTYRAC | 1 cut(s) | 699 |
| HindII | GTYRAC | 1 cut(s) | 699 |
| HindIII | AAGCTT | 2 cut(s) | 1959, 2907 |
| HinfI | GANTC | 6 cut(s) | 394, 1028, 1211, 1436, 2524, 2813 |
| HpaII | CCGG | 4 cut(s) | 922, 1105, 2588, 2792 |
| HphI | GGTGA | 4 cut(s) | 23, 476, 1517, 2246 |
| Hpy166II | GTNNAC | 4 cut(s) | 263, 699, 1456, 1682 |
| Hpy8I | GTNNAC | 4 cut(s) | 263, 699, 1456, 1682 |
| Hpy99I | CGWCG | 1 cut(s) | 1354 |
| HpyCH4III | ACNGT | 7 cut(s) | 1014, 1197, 1607, 1994, 2099, 2784, 2809 |
| HpyCH4IV | ACGT | 2 cut(s) | 1452, 2734 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 107, 1697, 2887 |
| HpyF3I | CTNAG | 5 cut(s) | 844, 2016, 2157, 2261, 2480 |
| HpySE526I | ACGT | 2 cut(s) | 1452, 2734 |
| Hsp92I | GRCGYC | 1 cut(s) | 851 |
| KroI | GCCGGC | 2 cut(s) | 921, 1104 |
| KroNI | GCCGGC | 2 cut(s) | 923, 1106 |
| Ksp22I | TGATCA | 1 cut(s) | 2704 |
| Kzo9I | GATC | 8 cut(s) | 337, 414, 481, 542, 1300, 2078, 2211, 2704 |
| LguI | GCTCTTC | 1 cut(s) | 1379 |
| LmnI | GCTCC | 1 cut(s) | 858 |
| Lsp1109I | GCAGC | 8 cut(s) | 461, 806, 937, 1120, 1374, 1563, 1641, 2902 |
| MaeII | ACGT | 2 cut(s) | 1452, 2734 |
| MaeIII | GTNAC | 7 cut(s) | 29, 598, 847, 952, 1135, 1561, 2775 |
| MalI | GATC | 8 cut(s) | 339, 416, 483, 544, 1302, 2080, 2213, 2706 |
| MboI | GATC | 8 cut(s) | 337, 414, 481, 542, 1300, 2078, 2211, 2704 |
| MfeI | CAATTG | 1 cut(s) | 2679 |
| MflI | RGATCY | 1 cut(s) | 542 |
| MhlI | GDGCHC | 3 cut(s) | 863, 915, 1098 |
| MlsI | TGGCCA | 2 cut(s) | 357, 2726 |
| MluNI | TGGCCA | 2 cut(s) | 357, 2726 |
| MlyI | GAGTC | 1 cut(s) | 388 |
| MmeI | TCCRAC | 6 cut(s) | 214, 227, 604, 829, 1033, 1216 |
| Mox20I | TGGCCA | 2 cut(s) | 357, 2726 |
| MroNI | GCCGGC | 2 cut(s) | 921, 1104 |
| MscI | TGGCCA | 2 cut(s) | 357, 2726 |
| MseI | TTAA | 5 cut(s) | 1515, 1547, 1737, 2279, 2420 |
| MslI | CAYNNNNRTG | 1 cut(s) | 489 |
| Msp20I | TGGCCA | 2 cut(s) | 357, 2726 |
| MspA1I | CMGCKG | 1 cut(s) | 1812 |
| MspI | CCGG | 4 cut(s) | 922, 1105, 2588, 2792 |
| MspR9I | CCNGG | 4 cut(s) | 47, 446, 2589, 2793 |
| MunI | CAATTG | 1 cut(s) | 2679 |
| Mva1269I | GAATGC | 2 cut(s) | 1264, 1425 |
| MvaI | CCWGG | 2 cut(s) | 47, 446 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 107, 1697, 2887 |
| NaeI | GCCGGC | 2 cut(s) | 923, 1106 |
| NciI | CCSGG | 2 cut(s) | 2589, 2793 |
| NcoI | CCATGG | 2 cut(s) | 854, 2364 |
| NdeI | CATATG | 3 cut(s) | 229, 1460, 2895 |
| NdeII | GATC | 8 cut(s) | 337, 414, 481, 542, 1300, 2078, 2211, 2704 |
| NgoMIV | GCCGGC | 2 cut(s) | 921, 1104 |
| NlaIV | GGNNCC | 3 cut(s) | 544, 637, 2748 |
| NmeAIII | GCCGAG | 3 cut(s) | 77, 2147, 2899 |
| NmuCI | GTSAC | 5 cut(s) | 29, 598, 847, 952, 1135 |
| NspI | RCATGY | 3 cut(s) | 812, 2350, 2377 |
| NspV | TTCGAA | 1 cut(s) | 1613 |
| PagI | TCATGA | 1 cut(s) | 2515 |
| PaqCI | CACCTGC | 1 cut(s) | 2222 |
| PceI | AGGCCT | 2 cut(s) | 961, 1144 |
| PciI | ACATGT | 1 cut(s) | 808 |
| PciSI | GCTCTTC | 1 cut(s) | 1379 |
| PctI | GAATGC | 2 cut(s) | 1264, 1425 |
| PdiI | GCCGGC | 2 cut(s) | 923, 1106 |
| PfeI | GAWTC | 5 cut(s) | 1028, 1211, 1436, 2524, 2813 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 233 |
| PfoI | TCCNGGA | 1 cut(s) | 45 |
| PkrI | GCNGC | 8 cut(s) | 451, 821, 927, 1110, 1364, 1578, 1656, 2892 |
| PleI | GAGTC | 1 cut(s) | 388 |
| PpsI | GAGTC | 1 cut(s) | 388 |
| PpuMI | RGGWCCY | 2 cut(s) | 636, 2761 |
| PscI | ACATGT | 1 cut(s) | 808 |
| PsiI | TTATAA | 1 cut(s) | 2358 |
| Psp1406I | AACGTT | 1 cut(s) | 1452 |
| Psp5II | RGGWCCY | 2 cut(s) | 636, 2761 |
| Psp6I | CCWGG | 2 cut(s) | 45, 444 |
| PspFI | CCCAGC | 3 cut(s) | 682, 1308, 2021 |
| PspGI | CCWGG | 2 cut(s) | 45, 444 |
| PspN4I | GGNNCC | 3 cut(s) | 544, 637, 2748 |
| PspPI | GGNCC | 7 cut(s) | 224, 321, 613, 636, 2509, 2746, 2761 |
| PspPPI | RGGWCCY | 2 cut(s) | 636, 2761 |
| PstI | CTGCAG | 2 cut(s) | 1659, 1861 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1559 |
| PsuI | RGATCY | 1 cut(s) | 542 |
| RsaI | GTAC | 6 cut(s) | 350, 1573, 1681, 1869, 2076, 2324 |
| RsaNI | GTAC | 6 cut(s) | 349, 1572, 1680, 1868, 2075, 2323 |
| RseI | CAYNNNNRTG | 1 cut(s) | 489 |
| SapI | GCTCTTC | 1 cut(s) | 1379 |
| SaqAI | TTAA | 5 cut(s) | 1515, 1547, 1737, 2279, 2420 |
| SatI | GCNGC | 8 cut(s) | 450, 820, 926, 1109, 1363, 1577, 1655, 2891 |
| Sau3AI | GATC | 8 cut(s) | 337, 414, 481, 542, 1300, 2078, 2211, 2704 |
| Sau96I | GGNCC | 7 cut(s) | 224, 321, 613, 636, 2509, 2746, 2761 |
| ScaI | AGTACT | 1 cut(s) | 2324 |
| SchI | GAGTC | 1 cut(s) | 388 |
| ScrFI | CCNGG | 4 cut(s) | 47, 446, 2589, 2793 |
| SduI | GDGCHC | 3 cut(s) | 863, 915, 1098 |
| SfcI | CTRYAG | 5 cut(s) | 1567, 1655, 1857, 2095, 2780 |
| SfuI | TTCGAA | 1 cut(s) | 1613 |
| SinI | GGWCC | 5 cut(s) | 224, 321, 636, 2746, 2761 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 489 |
| SmlI | CTYRAG | 4 cut(s) | 270, 367, 640, 2922 |
| SmoI | CTYRAG | 4 cut(s) | 270, 367, 640, 2922 |
| SseBI | AGGCCT | 2 cut(s) | 961, 1144 |
| SsiI | CCGC | 3 cut(s) | 919, 1102, 1812 |
| SspI | AATATT | 3 cut(s) | 977, 1160, 2715 |
| StuI | AGGCCT | 2 cut(s) | 961, 1144 |
| StyD4I | CCNGG | 4 cut(s) | 45, 444, 2587, 2791 |
| StyI | CCWWGG | 2 cut(s) | 854, 2364 |
| TaaI | ACNGT | 7 cut(s) | 1014, 1197, 1607, 1994, 2099, 2784, 2809 |
| TaiI | ACGT | 2 cut(s) | 1455, 2737 |
| TaqI | TCGA | 1 cut(s) | 1613 |
| TatI | WGTACW | 1 cut(s) | 2322 |
| TfiI | GAWTC | 5 cut(s) | 1028, 1211, 1436, 2524, 2813 |
| Tru1I | TTAA | 5 cut(s) | 1515, 1547, 1737, 2279, 2420 |
| Tru9I | TTAA | 5 cut(s) | 1515, 1547, 1737, 2279, 2420 |
| TscAI | CASTG | 4 cut(s) | 88, 478, 852, 2789 |
| TseFI | GTSAC | 5 cut(s) | 29, 598, 847, 952, 1135 |
| TseI | GCWGC | 8 cut(s) | 449, 819, 925, 1108, 1362, 1576, 1654, 2890 |
| Tsp45I | GTSAC | 5 cut(s) | 29, 598, 847, 952, 1135 |
| TspGWI | ACGGA | 1 cut(s) | 817 |
| TspRI | CASTG | 4 cut(s) | 88, 478, 852, 2789 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 233 |
| VpaK11BI | GGWCC | 5 cut(s) | 224, 321, 636, 2746, 2761 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2015 |
| XapI | RAATTY | 6 cut(s) | 675, 1373, 1413, 1595, 1772, 2618 |
| XbaI | TCTAGA | 1 cut(s) | 397 |
| XceI | RCATGY | 3 cut(s) | 812, 2350, 2377 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 976, 1159 |
| ZrmI | AGTACT | 1 cut(s) | 2324 |