Pentatricopeptide repeat-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G10910 AT1G10910 |
| fragaria_vesca | FvH4_5g29340 FvH4_5g29340 FvH4_5g29340 FvH4_5g29340 FvH4_5g29340 FvH4_5g29340 FvH4_5g29340 FvH4_5g29340 FvH4_5g29340 FvH4_5g29340 |
| malus_domestica | MD15G1423900.v1.1 |
| prunus_persica | Prupe.1G569600_v2.0.a1 |
| pyrus_communis | pycom15g37570 |
| rosa_chinensis | RchiOBHm_Chr7g0222211 |
| rosa_laevigata | RLG00000002083 |
| rosa_multiflora | Rmu_ssc0000240.1_g000019 |
| rosa_roxburghii | Rroxscaffold_3G00237300 |
| rosa_rugosa | Rorug07G0206800 |
| rosa_samantha | Rh7AG347400 Rh7BG338100 Rh7CG365000 Rh7DG345600 |
| rosa_wichuraiana | Rw7G029440 Rw7G029860 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 65 |
| AcuI | CTGAAG | 1 cut(s) | 68 |
| AgsI | TTSAA | 1 cut(s) | 79 |
| AluBI | AGCT | 1 cut(s) | 137 |
| AluI | AGCT | 1 cut(s) | 137 |
| AseI | ATTAAT | 1 cut(s) | 170 |
| AsuHPI | GGTGA | 1 cut(s) | 23 |
| AxyI | CCTNAGG | 1 cut(s) | 163 |
| BanI | GGYRCC | 1 cut(s) | 65 |
| BfaI | CTAG | 1 cut(s) | 105 |
| BmiI | GGNNCC | 1 cut(s) | 67 |
| BmsI | GCATC | 1 cut(s) | 75 |
| Bse21I | CCTNAGG | 1 cut(s) | 163 |
| BseGI | GGATG | 1 cut(s) | 90 |
| BseMII | CTCAG | 1 cut(s) | 177 |
| BseRI | GAGGAG | 1 cut(s) | 111 |
| Bsh1285I | CGRYCG | 1 cut(s) | 146 |
| BshNI | GGYRCC | 1 cut(s) | 65 |
| BsiEI | CGRYCG | 1 cut(s) | 146 |
| BspCNI | CTCAG | 1 cut(s) | 176 |
| BspLI | GGNNCC | 1 cut(s) | 67 |
| BspT107I | GGYRCC | 1 cut(s) | 65 |
| Bst6I | CTCTTC | 1 cut(s) | 44 |
| BstC8I | GCNNGC | 1 cut(s) | 135 |
| BstDEI | CTNAG | 1 cut(s) | 163 |
| BstF5I | GGATG | 1 cut(s) | 90 |
| BstMCI | CGRYCG | 1 cut(s) | 146 |
| Bsu36I | CCTNAGG | 1 cut(s) | 163 |
| BtsCI | GGATG | 1 cut(s) | 90 |
| Cac8I | GCNNGC | 1 cut(s) | 135 |
| CviJI | RGCY | 4 cut(s) | 46, 59, 108, 137 |
| CviKI_1 | RGCY | 4 cut(s) | 46, 59, 108, 137 |
| DdeI | CTNAG | 1 cut(s) | 163 |
| Eam1104I | CTCTTC | 1 cut(s) | 44 |
| EarI | CTCTTC | 1 cut(s) | 44 |
| Eco57I | CTGAAG | 1 cut(s) | 68 |
| Eco81I | CCTNAGG | 1 cut(s) | 163 |
| FaiI | YATR | 3 cut(s) | 22, 24, 26 |
| FokI | GGATG | 1 cut(s) | 97 |
| FspBI | CTAG | 1 cut(s) | 105 |
| HinfI | GANTC | 1 cut(s) | 101 |
| HphI | GGTGA | 1 cut(s) | 23 |
| Hpy188III | TCNNGA | 1 cut(s) | 165 |
| HpyAV | CCTTC | 2 cut(s) | 36, 142 |
| HpyCH4V | TGCA | 1 cut(s) | 88 |
| HpyF3I | CTNAG | 1 cut(s) | 163 |
| LpnPI | CCDG | 2 cut(s) | 46, 150 |
| LweI | GCATC | 1 cut(s) | 75 |
| MaeI | CTAG | 1 cut(s) | 105 |
| MboII | GAAGA | 2 cut(s) | 16, 61 |
| MluCI | AATT | 1 cut(s) | 171 |
| MnlI | CCTC | 5 cut(s) | 79, 89, 123, 172, 196 |
| MseI | TTAA | 3 cut(s) | 113, 170, 208 |
| NlaIV | GGNNCC | 1 cut(s) | 67 |
| PfeI | GAWTC | 1 cut(s) | 101 |
| PshBI | ATTAAT | 1 cut(s) | 170 |
| PspN4I | GGNNCC | 1 cut(s) | 67 |
| SaqAI | TTAA | 3 cut(s) | 113, 170, 208 |
| SetI | ASST | 3 cut(s) | 21, 71, 139 |
| SfaNI | GCATC | 1 cut(s) | 75 |
| SgeI | CNNG | 5 cut(s) | 45, 105, 117, 146, 177 |
| Sse9I | AATT | 1 cut(s) | 171 |
| SspMI | CTAG | 1 cut(s) | 105 |
| TaqI | TCGA | 1 cut(s) | 146 |
| TaqII | GACCGA | 1 cut(s) | 132 |
| TasI | AATT | 1 cut(s) | 171 |
| TfiI | GAWTC | 1 cut(s) | 101 |
| Tru1I | TTAA | 3 cut(s) | 113, 170, 208 |
| Tru9I | TTAA | 3 cut(s) | 113, 170, 208 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| VspI | ATTAAT | 1 cut(s) | 170 |
| XspI | CTAG | 1 cut(s) | 105 |