Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004683

Physical Location & Seq

Genomic Coordinates Reverse (-)

3665087 .. 3667139

Gene Structure 2053 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G10970.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1125 bp

ATGGCTTCTTCTACCACTAAAATCCTCTGTGATGCTGGCGAATCAGACCTCTGTAGAGACGATTCTGCTGCATTTCTCCTTAAGTTTGTAGCCATTGCCTCCATTCTACTAGCTGGAGCTGCTGGTGTAGCCATACCTCTCATTGGCAGGAACCGCCGGTTTCTTCAAACCGAGGGAAATCTCTTTGTAGCTGCTAAAGCCTTTGCAGCTGGTGTCATACTCGCCACCGGCTTTGTCCATATGCTTGCAGGTGGCACAGAAGCTCTGAGTAATCCGTGTTTACCGGATTTTCCGTGGTCTAAGTTTCCCTTTCCCGGGTTCTTTGCAATGGTTGCTGCTTTAGCTACTCTGCTTGTTGATTTCATGGGGACACAGTACTATGAGAGGAAGCAAGAGAGGAATCAGGCTGCTACTGAAGCCGCTGCTGGTAGTGAAGAGATTGCTGTTGTTCCTGTGGTTGGGGAAAGAGTGACCGATAATAAAGTGTTTGGTGAAGAAGACGGTGGCGGGATTCACATTGTCGGCATTCGTGCACATGCTGCTCACCATAGGCATAGTCACTCTAATAGTCATGGTACATGTGATGGACATGCTCATGGACATTCACACGGACATATGCACGGGAATTCAGATGTTGAAAATGGAGCTAGGCATGTTGTTGTTTCTCAGATATTGGAGCTCGGGATTGTGTCGCACTCAATCATCATCGGTTTATCCCTGGGGGTATCACAGTCTCCATGCACGATCAGGCCTCTTATTGCAGCTCTGTCATTTCACCAGTTCTTTGAAGGATTTGCGCTCGGAGGCTGCATCTCTCAGGCACAGTTCAGGAACAAATCAGCGACCATAATGGCTTGCTTCTTTGCGCTAACCACACCATTAGGGATCGGGATTGGAACTGCAGTGGCCTCATCTTTCAACTCGCATAGCCCTGGAGCTTTGGTCACTGAGGGGATACTGGACTCGCTGTCAGCTGGAATACTGGTGTACATGGCTCTGGTGGACCTCATCGCAGCTGATTTTCTGAGTAAGAGGATGAGTTGTAATTTGAGGCTTCAAGTTGTGTCTTATGTAATGTTGTTCCTTGGAGCTGGACTTATGTCTGCTCTCGCCATTTGGGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0003674 GO:0005215 GO:0005381 GO:0005385 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006826 GO:0006829 GO:0008150 GO:0008324 GO:0009605 GO:0009607 GO:0009624 GO:0010035 GO:0010038 GO:0010043 GO:0015075 GO:0015318 GO:0016020 GO:0022857 GO:0022890 GO:0030001 GO:0031090 GO:0034220 GO:0034755 GO:0042221 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0046915 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0070838 GO:0071577 GO:0071944 GO:0072509 GO:0072511 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Zip

Protein Analysis

374

Amino Acids

39.29

Weight (kDa)

6.29

Isoelectric Point (pI)

39.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Zip	PF02535	26 - 371	4.4e-87	ZIP Zinc transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004683)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10970 AT1G10970 AT1G60960 AT1G60960 AT1G60960 AT4G33020 AT4G33020
fragaria_vesca	FvH4_2g31850 FvH4_2g31850 FvH4_2g31850 FvH4_2g31850 FvH4_2g31850 FvH4_2g31850 FvH4_2g31850 FvH4_2g31850
malus_domestica	MD08G1061900.v1.1 MD15G1059800.v1.1
prunus_persica	Prupe.1G411700_v2.0.a1
pyrus_communis	pycom08g05140 pycom15g05610
rosa_chinensis	RchiOBHm_Chr6g0310941
rosa_laevigata	RLG00000010448
rosa_multiflora	Rmu_sc0035061.1_g000001
rosa_roxburghii	Rroxscaffold_7G00158150
rosa_rugosa	Rorug06G0384300 Rorug06G0384400
rosa_samantha	Rh6AG498100 Rh6BG508500 Rh6CG514400 Rh6DG500900
rosa_wichuraiana	Rw6G043380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	239
Acc36I	ACCTGC	1 cut(s)	239
AciI	CCGC	3 cut(s)	154, 420, 507
AclWI	GGATC	1 cut(s)	893
AcsI	RAATTY	1 cut(s)	625
AcuI	CTGAAG	1 cut(s)	435
AfaI	GTAC	3 cut(s)	377, 577, 989
AfiI	CCNNNNNNNGG	4 cut(s)	143, 314, 315, 458
AflII	CTTAAG	1 cut(s)	80
AflIII	ACRYGT	1 cut(s)	578
AgsI	TTSAA	5 cut(s)	167, 638, 788, 919, 1058
AhdI	GACNNNNNGTC	1 cut(s)	967
AjnI	CCWGG	2 cut(s)	717, 931
Alw21I	GWGCWC	2 cut(s)	535, 681
Alw26I	GTCTC	2 cut(s)	51, 738
Alw44I	GTGCAC	1 cut(s)	531
AlwI	GGATC	1 cut(s)	893
Ama87I	CYCGRG	2 cut(s)	314, 680
AoxI	GGCC	2 cut(s)	749, 906
ApaLI	GTGCAC	1 cut(s)	531
ApoI	RAATTY	1 cut(s)	625
AspLEI	GCGC	2 cut(s)	799, 868
AspS9I	GGNCC	1 cut(s)	1003
AsuC2I	CCSGG	2 cut(s)	315, 316
AsuHPI	GGTGA	3 cut(s)	503, 536, 767
AvaI	CYCGRG	2 cut(s)	314, 680
AvaII	GGWCC	1 cut(s)	1003
BaeGI	GKGCMC	1 cut(s)	535
BanII	GRGCYC	1 cut(s)	681
BbsI	GAAGAC	1 cut(s)	504
Bbv12I	GWGCWC	2 cut(s)	535, 681
BccI	CCATC	1 cut(s)	578
BcgI	CGANNNNNNTGC	2 cut(s)	50, 84
BciT130I	CCWGG	2 cut(s)	719, 933
BciVI	GTATCC	1 cut(s)	948
BcnI	CCSGG	2 cut(s)	315, 316
BcoDI	GTCTC	2 cut(s)	51, 738
BfaI	CTAG	2 cut(s)	110, 648
BfmI	CTRYAG	2 cut(s)	52, 900
BfrI	CTTAAG	1 cut(s)	80
BfuAI	ACCTGC	1 cut(s)	239
BfuI	GTATCC	1 cut(s)	948
BglI	GCCNNNNNGGC	1 cut(s)	1118
BmcAI	AGTACT	1 cut(s)	377
Bme1390I	CCNGG	4 cut(s)	315, 316, 719, 933
Bme18I	GGWCC	1 cut(s)	1003
BmeRI	GACNNNNNGTC	1 cut(s)	967
BmeT110I	CYCGRG	2 cut(s)	314, 680
BmgT120I	GGNCC	1 cut(s)	1003
BmiI	GGNNCC	1 cut(s)	152
BmrFI	CCNGG	4 cut(s)	315, 316, 719, 933
BmsI	GCATC	2 cut(s)	22, 819
BoxI	GACNNNNGTC	1 cut(s)	1099
BpiI	GAAGAC	1 cut(s)	504
BpmI	CTGGAG	2 cut(s)	135, 954
BpuMI	CCSGG	2 cut(s)	315, 316
BsaJI	CCNNGG	7 cut(s)	171, 293, 314, 717, 718, 931, 1084
BsaWI	WCCGGW	1 cut(s)	283
BsaXI	ACNNNNNCTCC	2 cut(s)	927, 957
Bsc4I	CCNNNNNNNGG	4 cut(s)	143, 314, 315, 458
Bse118I	RCCGGY	2 cut(s)	156, 227
Bse1I	ACTGG	3 cut(s)	778, 963, 987
Bse3DI	GCAATG	2 cut(s)	93, 333
BseBI	CCWGG	2 cut(s)	719, 933
BseDI	CCNNGG	7 cut(s)	171, 293, 314, 717, 718, 931, 1084
BseGI	GGATG	1 cut(s)	1041
BseLI	CCNNNNNNNGG	4 cut(s)	143, 314, 315, 458
BseMI	GCAATG	2 cut(s)	93, 333
BseMII	CTCAG	5 cut(s)	257, 680, 830, 939, 1016
BseNI	ACTGG	3 cut(s)	778, 963, 987
BseSI	GKGCMC	1 cut(s)	535
BshFI	GGCC	2 cut(s)	751, 908
BsiHKAI	GWGCWC	2 cut(s)	535, 681
BsiHKCI	CYCGRG	2 cut(s)	314, 680
BsiSI	CCGG	4 cut(s)	157, 228, 284, 315
BslFI	GGGAC	1 cut(s)	382
BslI	CCNNNNNNNGG	4 cut(s)	143, 314, 315, 458
BsmAI	GTCTC	2 cut(s)	51, 738
BsmBI	CGTCTC	1 cut(s)	51
BsmFI	GGGAC	1 cut(s)	382
BsmI	GAATGC	1 cut(s)	525
BsnI	GGCC	2 cut(s)	751, 908
BsoBI	CYCGRG	2 cut(s)	314, 680
Bsp1286I	GDGCHC	2 cut(s)	535, 681
Bsp1407I	TGTACA	1 cut(s)	987
Bsp143I	GATC	2 cut(s)	744, 885
BspACI	CCGC	3 cut(s)	154, 420, 507
BspANI	GGCC	2 cut(s)	751, 908
BspCNI	CTCAG	5 cut(s)	258, 679, 829, 940, 1017
BspLI	GGNNCC	1 cut(s)	152
BspMAI	CTGCAG	1 cut(s)	904
BspMI	ACCTGC	1 cut(s)	239
BspPI	GGATC	1 cut(s)	893
BspTI	CTTAAG	1 cut(s)	80
BsrDI	GCAATG	2 cut(s)	93, 333
BsrFI	RCCGGY	2 cut(s)	156, 227
BsrGI	TGTACA	1 cut(s)	987
BsrI	ACTGG	3 cut(s)	778, 963, 987
BssAI	RCCGGY	2 cut(s)	156, 227
BssECI	CCNNGG	7 cut(s)	171, 293, 314, 717, 718, 931, 1084
BssMI	GATC	2 cut(s)	744, 885
BssT1I	CCWWGG	1 cut(s)	1084
Bst2UI	CCWGG	2 cut(s)	719, 933
Bst4CI	ACNGT	4 cut(s)	375, 503, 732, 825
Bst6I	CTCTTC	1 cut(s)	429
BstAFI	CTTAAG	1 cut(s)	80
BstAPI	GCANNNNNTGC	2 cut(s)	332, 539
BstAUI	TGTACA	1 cut(s)	987
BstC8I	GCNNGC	3 cut(s)	37, 246, 856
BstDEI	CTNAG	7 cut(s)	266, 300, 666, 816, 948, 1025, 1122
BstDSI	CCRYGG	1 cut(s)	293
BstF5I	GGATG	1 cut(s)	1041
BstHHI	GCGC	2 cut(s)	799, 868
BstKTI	GATC	2 cut(s)	747, 888
BstMAI	GTCTC	2 cut(s)	51, 738
BstMBI	GATC	2 cut(s)	744, 885
BstNI	CCWGG	2 cut(s)	719, 933
BstNSI	RCATGY	4 cut(s)	539, 582, 593, 656
BstPAI	GACNNNNGTC	1 cut(s)	1099
BstSCI	CCNGG	4 cut(s)	313, 314, 717, 931
BstSFI	CTRYAG	2 cut(s)	52, 900
BstSLI	GKGCMC	1 cut(s)	535
BstV2I	GAAGAC	1 cut(s)	504
BsuI	GTATCC	1 cut(s)	948
BsuRI	GGCC	2 cut(s)	751, 908
BtgI	CCRYGG	1 cut(s)	293
BtgZI	GCGATG	1 cut(s)	994
BtsCI	GGATG	1 cut(s)	1041
BtsI	GCAGTG	1 cut(s)	909
BtsIMutI	CAGTG	2 cut(s)	909, 945
BveI	ACCTGC	1 cut(s)	239
Cac8I	GCNNGC	3 cut(s)	37, 246, 856
CfoI	GCGC	2 cut(s)	799, 868
Cfr10I	RCCGGY	2 cut(s)	156, 227
Cfr13I	GGNCC	1 cut(s)	1003
Cfr9I	CCCGGG	1 cut(s)	314
Csp6I	GTAC	3 cut(s)	376, 576, 988
CspCI	CAANNNNNGTGG	2 cut(s)	214, 249
CviAII	CATG	9 cut(s)	364, 536, 572, 579, 590, 596, 653, 738, 991
CviQI	GTAC	3 cut(s)	376, 576, 988
DdeI	CTNAG	7 cut(s)	266, 300, 666, 816, 948, 1025, 1122
DpnI	GATC	2 cut(s)	746, 887
DpnII	GATC	2 cut(s)	744, 885
DriI	GACNNNNNGTC	1 cut(s)	967
Eam1104I	CTCTTC	1 cut(s)	429
Eam1105I	GACNNNNNGTC	1 cut(s)	967
EarI	CTCTTC	1 cut(s)	429
Ecl136II	GAGCTC	1 cut(s)	679
Eco130I	CCWWGG	1 cut(s)	1084
Eco147I	AGGCCT	1 cut(s)	751
Eco24I	GRGCYC	1 cut(s)	681
Eco47I	GGWCC	1 cut(s)	1003
Eco53kI	GAGCTC	1 cut(s)	679
Eco57I	CTGAAG	1 cut(s)	435
Eco88I	CYCGRG	2 cut(s)	314, 680
EcoICRI	GAGCTC	1 cut(s)	679
EcoRI	GAATTC	1 cut(s)	625
EcoRII	CCWGG	2 cut(s)	717, 931
EcoT14I	CCWWGG	1 cut(s)	1084
EcoT38I	GRGCYC	1 cut(s)	681
ErhI	CCWWGG	1 cut(s)	1084
Esp3I	CGTCTC	1 cut(s)	51
FaeI	CATG	9 cut(s)	367, 539, 575, 582, 593, 599, 656, 741, 994
FalI	AAGNNNNNCTT	2 cut(s)	293, 325
FaqI	GGGAC	1 cut(s)	382
FatI	CATG	9 cut(s)	363, 535, 571, 578, 589, 595, 652, 737, 990
FauI	CCCGC	1 cut(s)	500
FauNDI	CATATG	2 cut(s)	240, 615
FokI	GGATG	1 cut(s)	1048
FriOI	GRGCYC	1 cut(s)	681
FspBI	CTAG	2 cut(s)	110, 648
GlaI	GCGC	2 cut(s)	798, 867
GsuI	CTGGAG	2 cut(s)	135, 954
HaeIII	GGCC	2 cut(s)	751, 908
HapII	CCGG	4 cut(s)	157, 228, 284, 315
HhaI	GCGC	2 cut(s)	799, 868
Hin1II	CATG	9 cut(s)	367, 539, 575, 582, 593, 599, 656, 741, 994
Hin6I	GCGC	2 cut(s)	797, 866
HinP1I	GCGC	2 cut(s)	797, 866
HinfI	GANTC	5 cut(s)	41, 62, 400, 511, 962
HpaII	CCGG	4 cut(s)	157, 228, 284, 315
HphI	GGTGA	3 cut(s)	503, 536, 767
Hpy166II	GTNNAC	4 cut(s)	281, 533, 988, 1003
Hpy188I	TCNGA	6 cut(s)	46, 267, 631, 669, 803, 1026
Hpy188III	TCNNGA	3 cut(s)	682, 829, 889
Hpy8I	GTNNAC	4 cut(s)	281, 533, 988, 1003
HpyAV	CCTTC	1 cut(s)	782
HpyCH4III	ACNGT	4 cut(s)	375, 503, 732, 825
HpyF3I	CTNAG	7 cut(s)	266, 300, 666, 816, 948, 1025, 1122
Hsp92II	CATG	9 cut(s)	367, 539, 575, 582, 593, 599, 656, 741, 994
HspAI	GCGC	2 cut(s)	797, 866
Kzo9I	GATC	2 cut(s)	744, 885
LmnI	GCTCC	5 cut(s)	116, 644, 676, 935, 1088
LweI	GCATC	2 cut(s)	22, 819
MaeI	CTAG	2 cut(s)	110, 648
MaeIII	GTNAC	3 cut(s)	469, 557, 943
MalI	GATC	2 cut(s)	746, 887
MboI	GATC	2 cut(s)	744, 885
MboII	GAAGA	4 cut(s)	155, 446, 506, 509
MhlI	GDGCHC	2 cut(s)	535, 681
MluCI	AATT	2 cut(s)	625, 1045
MlyI	GAGTC	1 cut(s)	956
MseI	TTAA	1 cut(s)	81
MslI	CAYNNNNRTG	1 cut(s)	594
MspA1I	CMGCKG	4 cut(s)	209, 422, 974, 1016
MspCI	CTTAAG	1 cut(s)	80
MspI	CCGG	4 cut(s)	157, 228, 284, 315
MspR9I	CCNGG	4 cut(s)	315, 316, 719, 933
Mva1269I	GAATGC	1 cut(s)	525
MvaI	CCWGG	2 cut(s)	719, 933
NciI	CCSGG	2 cut(s)	315, 316
NdeI	CATATG	2 cut(s)	240, 615
NdeII	GATC	2 cut(s)	744, 885
NlaIII	CATG	9 cut(s)	367, 539, 575, 582, 593, 599, 656, 741, 994
NlaIV	GGNNCC	1 cut(s)	152
NmuCI	GTSAC	3 cut(s)	469, 557, 943
NspI	RCATGY	4 cut(s)	539, 582, 593, 656
PaqCI	CACCTGC	1 cut(s)	239
PasI	CCCWGGG	1 cut(s)	718
PceI	AGGCCT	1 cut(s)	751
PciI	ACATGT	1 cut(s)	578
PctI	GAATGC	1 cut(s)	525
PfeI	GAWTC	4 cut(s)	41, 62, 400, 511
PleI	GAGTC	1 cut(s)	956
PpsI	GAGTC	1 cut(s)	956
PscI	ACATGT	1 cut(s)	578
PshAI	GACNNNNGTC	1 cut(s)	1099
Psp124BI	GAGCTC	1 cut(s)	681
Psp6I	CCWGG	2 cut(s)	717, 931
PspGI	CCWGG	2 cut(s)	717, 931
PspN4I	GGNNCC	1 cut(s)	152
PspPI	GGNCC	1 cut(s)	1003
PstI	CTGCAG	1 cut(s)	904
PvuII	CAGCTG	3 cut(s)	209, 974, 1016
RsaI	GTAC	3 cut(s)	377, 577, 989
RsaNI	GTAC	3 cut(s)	376, 576, 988
RseI	CAYNNNNRTG	1 cut(s)	594
SacI	GAGCTC	1 cut(s)	681
SaqAI	TTAA	1 cut(s)	81
Sau3AI	GATC	2 cut(s)	744, 885
Sau96I	GGNCC	1 cut(s)	1003
ScaI	AGTACT	1 cut(s)	377
SchI	GAGTC	1 cut(s)	956
ScrFI	CCNGG	4 cut(s)	315, 316, 719, 933
SduI	GDGCHC	2 cut(s)	535, 681
SfaNI	GCATC	2 cut(s)	22, 819
SfcI	CTRYAG	2 cut(s)	52, 900
SinI	GGWCC	1 cut(s)	1003
SmaI	CCCGGG	1 cut(s)	316
SmiMI	CAYNNNNRTG	1 cut(s)	594
SmlI	CTYRAG	1 cut(s)	80
SmoI	CTYRAG	1 cut(s)	80
Sse9I	AATT	2 cut(s)	625, 1045
SseBI	AGGCCT	1 cut(s)	751
SsiI	CCGC	3 cut(s)	154, 420, 507
SspMI	CTAG	2 cut(s)	110, 648
SstI	GAGCTC	1 cut(s)	681
StuI	AGGCCT	1 cut(s)	751
StyD4I	CCNGG	4 cut(s)	313, 314, 717, 931
StyI	CCWWGG	1 cut(s)	1084
TaaI	ACNGT	4 cut(s)	375, 503, 732, 825
TaqII	GACCGA	1 cut(s)	488
TasI	AATT	2 cut(s)	625, 1045
TatI	WGTACW	2 cut(s)	375, 987
TauI	GCSGC	1 cut(s)	422
TfiI	GAWTC	4 cut(s)	41, 62, 400, 511
Tru1I	TTAA	1 cut(s)	81
Tru9I	TTAA	1 cut(s)	81
TscAI	CASTG	2 cut(s)	909, 952
TseFI	GTSAC	3 cut(s)	469, 557, 943
Tsp45I	GTSAC	3 cut(s)	469, 557, 943
TspDTI	ATGAA	1 cut(s)	352
TspGWI	ACGGA	3 cut(s)	264, 282, 624
TspMI	CCCGGG	1 cut(s)	314
TspRI	CASTG	2 cut(s)	909, 952
Vha464I	CTTAAG	1 cut(s)	80
VneI	GTGCAC	1 cut(s)	531
VpaK11BI	GGWCC	1 cut(s)	1003
XapI	RAATTY	1 cut(s)	625
XceI	RCATGY	4 cut(s)	539, 582, 593, 656
XmaI	CCCGGG	1 cut(s)	314
XspI	CTAG	2 cut(s)	110, 648
ZrmI	AGTACT	1 cut(s)	377

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.