Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0004683

Physical Location & Seq

Genomic Coordinates Reverse (-)

65699714 .. 65702552

Gene Structure 2839 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG500900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1161 bp

ATGGCCACCTCCGCCGCCTGCGACGCCGCCGAGTCGGATTCCTGCCGGGACGACGCGGAGGCGCTCAATCTCAAATTCGTCGCCATCGCTTCCATTCTCCTCGCCGGAGTGATCGGAATTGCCATTCCTCTGGTCGGGAAGAACCGGAGGGTTCTCCGCACGGACGGCAGCCTCTTCGTCGGAGCGAAAGCCTTCGCCGCCGGCGTCATTCTCGCCACCGGATTCGTGCACATGCTCTCCGGCGGTTCCGACGCGCTTAACAGCCCGTGCCTGCCGGAGTTTCCATGGTCGAAGTTCCCCTTCTCTGGATTCTTCGCCATGATGGCATCGCTTGCCACCTTGCTCGTTGACTTCGTGGGCACCCAGTACTACGAGCGCAAACAGGGCCTGGCCCGGCCCACCGAGGACCAAGTTCGAGTCGGGTCGGACGACTCGAGACCGGGTCTCGAGTCGGGTATTGTCTCGGCCCAAAAGGAATCGAATGGCACGATTTTTGGGGAAGAGGAAGGCGGTCGTGGGATGCACATTGTGGGAATGCATGCCCACGCGGCGCACCATCGACACAGCCACCCTCAGGACGCATGTGACGGGCACGTGACCGAACCGGGTCATGTTGATTCGGGTCACGCCCACGGGCATGGCCATTCCCACGGCTTCGGTGATGATGACGAGGATACTGGTGTCCGCCACGTCGTCGTTTCACAGATTTTGGAACTTGGGATTGTATCACATTCTGTGATCATTGGGTTGTCACTGGGAGTGTCACAGAGCCCATGTACCATAAGGCCCTTAGTTGCAGCACTGTCCTTCCATCAGTTCTTTGAAGGTTTTGCACTTGGAGGCTGCATATCACAAGCCCAATTCAGGAACCGATCTGCAGCGATAATGGCTTGTTTTTTCGCCATAACAACTCCACTAGGTATTGGTGTTGGGATCGCAATTTCTTCATCCTACAACCCGAACAGTGCAGGAGCTCTGGTCACTGAAGGCATCTTGGATTCCATGTCTGCTGGTATTCTGGTCTACATGGCCTTGGTGGACCTAATTGCTGCTGACTTTCTGAGCAAGAGGATGAGCTGCAATTTTCGGCTTCAAATTCTGTCTTATTGCTTGCTATTTCTTGGAGCTGGGTCGATGTCTTTGCTTGCAATTTGGGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0003674 GO:0005215 GO:0005381 GO:0005385 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006826 GO:0006829 GO:0008150 GO:0008324 GO:0009605 GO:0009607 GO:0009624 GO:0010035 GO:0010038 GO:0010043 GO:0015075 GO:0015318 GO:0016020 GO:0022857 GO:0022890 GO:0030001 GO:0031090 GO:0034220 GO:0034755 GO:0042221 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0046915 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0070838 GO:0071577 GO:0071944 GO:0072509 GO:0072511 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Zip

Protein Analysis

386

Amino Acids

40.56

Weight (kDa)

5.78

Isoelectric Point (pI)

45.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Zip	PF02535	23 - 383	1.3e-78	ZIP Zinc transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0004683)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10970 AT1G10970 AT1G60960 AT1G60960 AT1G60960 AT4G33020 AT4G33020
fragaria_vesca	FvH4_2g31850 FvH4_2g31850 FvH4_2g31850 FvH4_2g31850 FvH4_2g31850 FvH4_2g31850 FvH4_2g31850 FvH4_2g31850
malus_domestica	MD08G1061900.v1.1 MD15G1059800.v1.1
prunus_persica	Prupe.1G411700_v2.0.a1
pyrus_communis	pycom08g05140 pycom15g05610
rosa_chinensis	RchiOBHm_Chr6g0310941
rosa_laevigata	RLG00000010448
rosa_multiflora	Rmu_sc0035061.1_g000001
rosa_roxburghii	Rroxscaffold_7G00158150
rosa_rugosa	Rorug06G0384300 Rorug06G0384400
rosa_samantha	Rh6AG498100 Rh6BG508500 Rh6CG514400 Rh6DG500900
rosa_wichuraiana	Rw6G043380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	359
AccI	GTMKAC	1 cut(s)	1023
AccII	CGCG	3 cut(s)	56, 254, 548
AclWI	GGATC	1 cut(s)	941
AcoI	YGGCCR	2 cut(s)	3, 640
AcsI	RAATTY	2 cut(s)	74, 1095
AcuI	CTGAAG	1 cut(s)	1005
AcvI	CACGTG	1 cut(s)	595
AcyI	GRCGYC	2 cut(s)	24, 204
AdeI	CACNNNGTG	1 cut(s)	529
AfaI	GTAC	2 cut(s)	368, 778
AfiI	CCNNNNNNNGG	4 cut(s)	134, 305, 574, 864
AgsI	TTSAA	2 cut(s)	824, 1094
AjiI	CACGTC	1 cut(s)	691
AjnI	CCWGG	1 cut(s)	387
AluBI	AGCT	3 cut(s)	974, 1077, 1127
AluI	AGCT	3 cut(s)	974, 1077, 1127
Alw21I	GWGCWC	2 cut(s)	231, 976
Alw26I	GTCTC	3 cut(s)	430, 449, 466
Alw44I	GTGCAC	1 cut(s)	227
AlwI	GGATC	1 cut(s)	941
AlwNI	CAGNNNCTG	1 cut(s)	388
Ama87I	CYCGRG	2 cut(s)	433, 446
AoxI	GGCC	8 cut(s)	3, 385, 390, 395, 465, 640, 785, 1029
ApaLI	GTGCAC	1 cut(s)	227
ApeKI	GCWGC	6 cut(s)	168, 797, 843, 878, 1049, 1077
ApoI	RAATTY	2 cut(s)	74, 1095
Asp700I	GAANNNNTTC	1 cut(s)	191
AspLEI	GCGC	4 cut(s)	64, 256, 378, 553
AspS9I	GGNCC	7 cut(s)	385, 391, 396, 406, 466, 786, 1039
AsuC2I	CCSGG	4 cut(s)	47, 394, 441, 606
AsuHPI	GGTGA	1 cut(s)	671
AvaI	CYCGRG	2 cut(s)	433, 446
AvaII	GGWCC	2 cut(s)	406, 1039
AxyI	CCTNAGG	1 cut(s)	573
BaeGI	GKGCMC	3 cut(s)	231, 362, 594
BaeI	ACNNNNGTAYC	2 cut(s)	666, 699
BalI	TGGCCA	2 cut(s)	5, 642
BanI	GGYRCC	1 cut(s)	359
BanII	GRGCYC	2 cut(s)	773, 976
BbrPI	CACGTG	1 cut(s)	595
Bbv12I	GWGCWC	2 cut(s)	231, 976
BbvI	GCAGC	6 cut(s)	180, 809, 830, 890, 1036, 1064
BccI	CCATC	4 cut(s)	92, 316, 564, 819
BceAI	ACGGC	2 cut(s)	181, 667
BcgI	CGANNNNNNTGC	4 cut(s)	157, 191, 1123, 1157
BciT130I	CCWGG	1 cut(s)	389
BciVI	GTATCC	1 cut(s)	667
BclI	TGATCA	1 cut(s)	738
BcnI	CCSGG	4 cut(s)	47, 394, 441, 606
BcoDI	GTCTC	3 cut(s)	430, 449, 466
BfaI	CTAG	1 cut(s)	917
BfmI	CTRYAG	1 cut(s)	876
BfoI	RGCGCY	1 cut(s)	65
BfuI	GTATCC	1 cut(s)	667
BglI	GCCNNNNNGGC	2 cut(s)	323, 548
BmcAI	AGTACT	1 cut(s)	368
Bme1390I	CCNGG	5 cut(s)	47, 389, 394, 441, 606
Bme18I	GGWCC	2 cut(s)	406, 1039
BmeT110I	CYCGRG	2 cut(s)	433, 446
BmgBI	CACGTC	1 cut(s)	691
BmgT120I	GGNCC	7 cut(s)	385, 391, 396, 406, 466, 786, 1039
BmiI	GGNNCC	3 cut(s)	247, 361, 869
BmrFI	CCNGG	5 cut(s)	47, 389, 394, 441, 606
BmrI	ACTGGG	2 cut(s)	358, 764
BmsI	GCATC	3 cut(s)	335, 510, 999
BmuI	ACTGGG	2 cut(s)	358, 764
BpuMI	CCSGG	4 cut(s)	47, 394, 441, 606
BsaAI	YACGTR	1 cut(s)	595
BsaHI	GRCGYC	2 cut(s)	24, 204
BsaI	GGTCTC	2 cut(s)	430, 449
BsaJI	CCNNGG	5 cut(s)	284, 402, 631, 649, 1032
BsaWI	WCCGGW	2 cut(s)	144, 218
BsaXI	ACNNNNNCTCC	4 cut(s)	221, 251, 963, 993
Bsc4I	CCNNNNNNNGG	4 cut(s)	134, 305, 574, 864
Bse118I	RCCGGY	1 cut(s)	200
Bse1I	ACTGG	3 cut(s)	364, 682, 759
Bse21I	CCTNAGG	1 cut(s)	573
BseBI	CCWGG	1 cut(s)	389
BseDI	CCNNGG	5 cut(s)	284, 402, 631, 649, 1032
BseGI	GGATG	3 cut(s)	525, 947, 1077
BseLI	CCNNNNNNNGG	4 cut(s)	134, 305, 574, 864
BseMII	CTCAG	2 cut(s)	587, 1052
BseNI	ACTGG	3 cut(s)	364, 682, 759
BseRI	GAGGAG	1 cut(s)	89
BseSI	GKGCMC	3 cut(s)	231, 362, 594
BseXI	GCAGC	6 cut(s)	180, 809, 830, 890, 1036, 1064
BseYI	CCCAGC	1 cut(s)	1127
BsgI	GTGCAG	1 cut(s)	987
Bsh1236I	CGCG	3 cut(s)	56, 254, 548
Bsh1285I	CGRYCG	1 cut(s)	514
BshFI	GGCC	8 cut(s)	5, 387, 392, 397, 467, 642, 787, 1031
BshNI	GGYRCC	1 cut(s)	359
BsiEI	CGRYCG	1 cut(s)	514
BsiHKAI	GWGCWC	2 cut(s)	231, 976
BsiHKCI	CYCGRG	2 cut(s)	433, 446
BslFI	GGGAC	1 cut(s)	62
BslI	CCNNNNNNNGG	4 cut(s)	134, 305, 574, 864
BsmAI	GTCTC	3 cut(s)	430, 449, 466
BsmFI	GGGAC	1 cut(s)	62
BsmI	GAATGC	1 cut(s)	540
BsnI	GGCC	8 cut(s)	5, 387, 392, 397, 467, 642, 787, 1031
Bso31I	GGTCTC	2 cut(s)	430, 449
BsoBI	CYCGRG	2 cut(s)	433, 446
Bsp1286I	GDGCHC	5 cut(s)	231, 362, 594, 773, 976
Bsp143I	GATC	4 cut(s)	111, 738, 872, 933
Bsp19I	CCATGG	1 cut(s)	284
BspANI	GGCC	8 cut(s)	5, 387, 392, 397, 467, 642, 787, 1031
BspCNI	CTCAG	2 cut(s)	586, 1053
BspFNI	CGCG	3 cut(s)	56, 254, 548
BspLI	GGNNCC	3 cut(s)	247, 361, 869
BspMAI	CTGCAG	1 cut(s)	880
BspPI	GGATC	1 cut(s)	941
BspT107I	GGYRCC	1 cut(s)	359
BspTNI	GGTCTC	2 cut(s)	430, 449
BsrFI	RCCGGY	1 cut(s)	200
BsrI	ACTGG	3 cut(s)	364, 682, 759
BssAI	RCCGGY	1 cut(s)	200
BssECI	CCNNGG	5 cut(s)	284, 402, 631, 649, 1032
BssMI	GATC	4 cut(s)	111, 738, 872, 933
BssNI	GRCGYC	2 cut(s)	24, 204
BssT1I	CCWWGG	2 cut(s)	284, 1032
Bst2UI	CCWGG	1 cut(s)	389
Bst4CI	ACNGT	2 cut(s)	804, 965
Bst6I	CTCTTC	2 cut(s)	179, 495
BstACI	GRCGYC	2 cut(s)	24, 204
BstAPI	GCANNNNNTGC	1 cut(s)	332
BstBAI	YACGTR	1 cut(s)	595
BstC8I	GCNNGC	7 cut(s)	19, 202, 272, 333, 540, 1112, 1146
BstDEI	CTNAG	4 cut(s)	573, 790, 1061, 1158
BstDSI	CCRYGG	3 cut(s)	284, 631, 649
BstF5I	GGATG	3 cut(s)	525, 947, 1077
BstFNI	CGCG	3 cut(s)	56, 254, 548
BstH2I	RGCGCY	1 cut(s)	65
BstHHI	GCGC	4 cut(s)	64, 256, 378, 553
BstKTI	GATC	4 cut(s)	114, 741, 875, 936
BstMAI	GTCTC	3 cut(s)	430, 449, 466
BstMBI	GATC	4 cut(s)	111, 738, 872, 933
BstMCI	CGRYCG	1 cut(s)	514
BstNI	CCWGG	1 cut(s)	389
BstNSI	RCATGY	3 cut(s)	235, 542, 585
BstSCI	CCNGG	5 cut(s)	45, 387, 392, 439, 604
BstSFI	CTRYAG	1 cut(s)	876
BstSLI	GKGCMC	3 cut(s)	231, 362, 594
BstUI	CGCG	3 cut(s)	56, 254, 548
BstV1I	GCAGC	6 cut(s)	180, 809, 830, 890, 1036, 1064
BstXI	CCANNNNNNTGG	2 cut(s)	130, 638
Bsu36I	CCTNAGG	1 cut(s)	573
BsuI	GTATCC	1 cut(s)	667
BsuRI	GGCC	8 cut(s)	5, 387, 392, 397, 467, 642, 787, 1031
BtgI	CCRYGG	3 cut(s)	284, 631, 649
BtgZI	GCGATG	2 cut(s)	70, 312
BtrI	CACGTC	1 cut(s)	691
BtsCI	GGATG	3 cut(s)	525, 947, 1077
BtsIMutI	CAGTG	4 cut(s)	752, 800, 970, 981
Cac8I	GCNNGC	7 cut(s)	19, 202, 272, 333, 540, 1112, 1146
CaiI	CAGNNNCTG	1 cut(s)	388
CfoI	GCGC	4 cut(s)	64, 256, 378, 553
Cfr10I	RCCGGY	1 cut(s)	200
Cfr13I	GGNCC	7 cut(s)	385, 391, 396, 406, 466, 786, 1039
CseI	GACGC	5 cut(s)	32, 62, 193, 260, 587
Csp6I	GTAC	2 cut(s)	367, 777
CviQI	GTAC	2 cut(s)	367, 777
DdeI	CTNAG	4 cut(s)	573, 790, 1061, 1158
DpnI	GATC	4 cut(s)	113, 740, 874, 935
DpnII	GATC	4 cut(s)	111, 738, 872, 933
DraIII	CACNNNGTG	1 cut(s)	529
EaeI	YGGCCR	2 cut(s)	3, 640
Eam1104I	CTCTTC	2 cut(s)	179, 495
EarI	CTCTTC	2 cut(s)	179, 495
EciI	GGCGGA	1 cut(s)	674
Ecl136II	GAGCTC	1 cut(s)	974
Eco130I	CCWWGG	2 cut(s)	284, 1032
Eco24I	GRGCYC	2 cut(s)	773, 976
Eco31I	GGTCTC	2 cut(s)	430, 449
Eco47I	GGWCC	2 cut(s)	406, 1039
Eco53kI	GAGCTC	1 cut(s)	974
Eco57I	CTGAAG	1 cut(s)	1005
Eco72I	CACGTG	1 cut(s)	595
Eco81I	CCTNAGG	1 cut(s)	573
Eco88I	CYCGRG	2 cut(s)	433, 446
EcoICRI	GAGCTC	1 cut(s)	974
EcoO109I	RGGNCCY	2 cut(s)	385, 786
EcoRII	CCWGG	1 cut(s)	387
EcoT14I	CCWWGG	2 cut(s)	284, 1032
EcoT22I	ATGCAT	1 cut(s)	540
EcoT38I	GRGCYC	2 cut(s)	773, 976
ErhI	CCWWGG	2 cut(s)	284, 1032
FalI	AAGNNNNNCTT	2 cut(s)	284, 316
FaqI	GGGAC	1 cut(s)	62
FbaI	TGATCA	1 cut(s)	738
FblI	GTMKAC	1 cut(s)	1023
FokI	GGATG	3 cut(s)	532, 934, 1084
FriOI	GRGCYC	2 cut(s)	773, 976
FspBI	CTAG	1 cut(s)	917
GlaI	GCGC	4 cut(s)	63, 255, 377, 552
GsaI	CCCAGC	1 cut(s)	1131
HaeII	RGCGCY	1 cut(s)	65
HaeIII	GGCC	8 cut(s)	5, 387, 392, 397, 467, 642, 787, 1031
HgaI	GACGC	5 cut(s)	32, 62, 193, 260, 587
HhaI	GCGC	4 cut(s)	64, 256, 378, 553
Hin1I	GRCGYC	2 cut(s)	24, 204
Hin6I	GCGC	4 cut(s)	62, 254, 376, 551
HinP1I	GCGC	4 cut(s)	62, 254, 376, 551
HincII	GTYRAC	1 cut(s)	349
HindII	GTYRAC	1 cut(s)	349
HphI	GGTGA	1 cut(s)	671
Hpy166II	GTNNAC	4 cut(s)	229, 349, 1024, 1039
Hpy188I	TCNGA	6 cut(s)	37, 116, 182, 250, 427, 1062
Hpy188III	TCNNGA	6 cut(s)	136, 306, 435, 446, 575, 865
Hpy8I	GTNNAC	4 cut(s)	229, 349, 1024, 1039
Hpy99I	CGWCG	7 cut(s)	26, 56, 83, 182, 254, 695, 698
HpyAV	CCTTC	6 cut(s)	202, 310, 500, 817, 818, 980
HpyCH4III	ACNGT	2 cut(s)	804, 965
HpyCH4IV	ACGT	2 cut(s)	594, 690
HpyF3I	CTNAG	4 cut(s)	573, 790, 1061, 1158
HpySE526I	ACGT	2 cut(s)	594, 690
Hsp92I	GRCGYC	2 cut(s)	24, 204
HspAI	GCGC	4 cut(s)	62, 254, 376, 551
KroI	GCCGGC	1 cut(s)	200
KroNI	GCCGGC	1 cut(s)	202
Ksp22I	TGATCA	1 cut(s)	738
Kzo9I	GATC	4 cut(s)	111, 738, 872, 933
LmnI	GCTCC	3 cut(s)	182, 971, 1124
Lsp1109I	GCAGC	6 cut(s)	180, 809, 830, 890, 1036, 1064
LweI	GCATC	3 cut(s)	335, 510, 999
MaeI	CTAG	1 cut(s)	917
MaeII	ACGT	2 cut(s)	594, 690
MaeIII	GTNAC	6 cut(s)	584, 595, 623, 750, 762, 979
MalI	GATC	4 cut(s)	113, 740, 874, 935
MboI	GATC	4 cut(s)	111, 738, 872, 933
MboII	GAAGA	5 cut(s)	151, 166, 304, 512, 936
MhlI	GDGCHC	5 cut(s)	231, 362, 594, 773, 976
MlsI	TGGCCA	2 cut(s)	5, 642
MluCI	AATT	8 cut(s)	74, 117, 860, 939, 1044, 1081, 1095, 1149
MluNI	TGGCCA	2 cut(s)	5, 642
MlyI	GAGTC	4 cut(s)	41, 425, 426, 458
MmeI	TCCRAC	4 cut(s)	15, 160, 273, 405
Mox20I	TGGCCA	2 cut(s)	5, 642
Mph1103I	ATGCAT	1 cut(s)	540
MreI	CGCCGGCG	1 cut(s)	200
MroNI	GCCGGC	1 cut(s)	200
MroXI	GAANNNNTTC	1 cut(s)	191
MscI	TGGCCA	2 cut(s)	5, 642
MseI	TTAA	1 cut(s)	258
MslI	CAYNNNNRTG	1 cut(s)	636
Msp20I	TGGCCA	2 cut(s)	5, 642
MspR9I	CCNGG	5 cut(s)	47, 389, 394, 441, 606
Mva1269I	GAATGC	1 cut(s)	540
MvaI	CCWGG	1 cut(s)	389
MvnI	CGCG	3 cut(s)	56, 254, 548
NaeI	GCCGGC	1 cut(s)	202
NciI	CCSGG	4 cut(s)	47, 394, 441, 606
NcoI	CCATGG	1 cut(s)	284
NdeII	GATC	4 cut(s)	111, 738, 872, 933
NgoMIV	GCCGGC	1 cut(s)	200
NlaIV	GGNNCC	3 cut(s)	247, 361, 869
NmeAIII	GCCGAG	2 cut(s)	55, 443
NmuCI	GTSAC	6 cut(s)	584, 595, 623, 750, 762, 979
NsiI	ATGCAT	1 cut(s)	540
NspI	RCATGY	3 cut(s)	235, 542, 585
PaeI	GCATGC	1 cut(s)	542
PaeR7I	CTCGAG	2 cut(s)	433, 446
PcsI	WCGNNNNNNNCGW	5 cut(s)	201, 351, 426, 431, 485
PctI	GAATGC	1 cut(s)	540
PdiI	GCCGGC	1 cut(s)	202
PdmI	GAANNNNTTC	1 cut(s)	191
PfeI	GAWTC	6 cut(s)	38, 222, 309, 476, 617, 998
PflFI	GACNNNGTC	1 cut(s)	441
PleI	GAGTC	4 cut(s)	40, 425, 425, 457
PmaCI	CACGTG	1 cut(s)	595
PmlI	CACGTG	1 cut(s)	595
PpsI	GAGTC	4 cut(s)	40, 425, 425, 457
Ppu21I	YACGTR	1 cut(s)	595
Psp124BI	GAGCTC	1 cut(s)	976
Psp6I	CCWGG	1 cut(s)	387
PspCI	CACGTG	1 cut(s)	595
PspFI	CCCAGC	1 cut(s)	1127
PspGI	CCWGG	1 cut(s)	387
PspN4I	GGNNCC	3 cut(s)	247, 361, 869
PspPI	GGNCC	7 cut(s)	385, 391, 396, 406, 466, 786, 1039
PstI	CTGCAG	1 cut(s)	880
PstNI	CAGNNNCTG	1 cut(s)	388
PsyI	GACNNNGTC	1 cut(s)	441
RsaI	GTAC	2 cut(s)	368, 778
RsaNI	GTAC	2 cut(s)	367, 777
RseI	CAYNNNNRTG	1 cut(s)	636
SacI	GAGCTC	1 cut(s)	976
SaqAI	TTAA	1 cut(s)	258
Sau3AI	GATC	4 cut(s)	111, 738, 872, 933
Sau96I	GGNCC	7 cut(s)	385, 391, 396, 406, 466, 786, 1039
ScaI	AGTACT	1 cut(s)	368
SchI	GAGTC	4 cut(s)	41, 425, 426, 458
ScrFI	CCNGG	5 cut(s)	47, 389, 394, 441, 606
SduI	GDGCHC	5 cut(s)	231, 362, 594, 773, 976
SfaNI	GCATC	3 cut(s)	335, 510, 999
SfcI	CTRYAG	1 cut(s)	876
Sfr274I	CTCGAG	2 cut(s)	433, 446
SgrAI	CRCCGGYG	1 cut(s)	200
SinI	GGWCC	2 cut(s)	406, 1039
SlaI	CTCGAG	2 cut(s)	433, 446
SmiMI	CAYNNNNRTG	1 cut(s)	636
SmlI	CTYRAG	2 cut(s)	433, 446
SmoI	CTYRAG	2 cut(s)	433, 446
SphI	GCATGC	1 cut(s)	542
Sse9I	AATT	8 cut(s)	74, 117, 860, 939, 1044, 1081, 1095, 1149
SspMI	CTAG	1 cut(s)	917
SstI	GAGCTC	1 cut(s)	976
StyD4I	CCNGG	5 cut(s)	45, 387, 392, 439, 604
StyI	CCWWGG	2 cut(s)	284, 1032
TaaI	ACNGT	2 cut(s)	804, 965
TaiI	ACGT	2 cut(s)	597, 693
TaqI	TCGA	7 cut(s)	290, 415, 434, 447, 479, 559, 1133
TaqII	GACCGA	1 cut(s)	614
TasI	AATT	8 cut(s)	74, 117, 860, 939, 1044, 1081, 1095, 1149
TatI	WGTACW	1 cut(s)	366
TauI	GCSGC	4 cut(s)	17, 29, 200, 551
TfiI	GAWTC	6 cut(s)	38, 222, 309, 476, 617, 998
Tru1I	TTAA	1 cut(s)	258
Tru9I	TTAA	1 cut(s)	258
TscAI	CASTG	4 cut(s)	759, 807, 970, 988
TseFI	GTSAC	6 cut(s)	584, 595, 623, 750, 762, 979
TseI	GCWGC	6 cut(s)	168, 797, 843, 878, 1049, 1077
Tsp45I	GTSAC	6 cut(s)	584, 595, 623, 750, 762, 979
TspDTI	ATGAA	1 cut(s)	936
TspGWI	ACGGA	1 cut(s)	176
TspRI	CASTG	4 cut(s)	759, 807, 970, 988
Tth111I	GACNNNGTC	1 cut(s)	441
VneI	GTGCAC	1 cut(s)	227
VpaK11BI	GGWCC	2 cut(s)	406, 1039
XapI	RAATTY	2 cut(s)	74, 1095
XceI	RCATGY	3 cut(s)	235, 542, 585
XhoI	CTCGAG	2 cut(s)	433, 446
XmiI	GTMKAC	1 cut(s)	1023
XmnI	GAANNNNTTC	1 cut(s)	191
XspI	CTAG	1 cut(s)	917
ZrmI	AGTACT	1 cut(s)	368
Zsp2I	ATGCAT	1 cut(s)	540

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.